Psyllid ID: psy697

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
Protein Sequence
MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESVF
Secondary Structure (PSIPRED)
ccccEEEcccEEEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccHHcEEEEEcccccEEEEEEccccccHHHHHHcccccccHHHHHHHHHHHHcccHHccccccccccccHHccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccEEEEEcccccHEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccEEEEEccccccHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccEEHcccccccccccccEEEccccccccccccccccc
Coil and Loop (DISEMBL)
mgdrigkghfgtvyngnwhgeVAVKVldvdylddeKTWEAFKLEVTTFRKTRHENLVLFmgacmkpphlaivtskcnghtlyTNIHIYKEKFALNKMSTVGQQISQDVLMkcwsykpsdrpdFITLMKSLEKlpkkrilarspshplnlsrsaesvf
Flexible Loop (DISEMBL)
mgdrigkghfgtvyngnwhgeVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLpkkrilarspshplnlsrsaesvf
Low Complexity Region (SEG)
MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESVF
Disordered region (IsUnstruct)
******KGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLM******************************
Disordered Region (DISOPRED)
MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLD*EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSH****SRS****F
Disordered Region (DISEMBL)
MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS*************
Disordered Region (DISPRO)
MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	157	2.2.26 [Sep-21-2011]
Q3UVC0	959	Kinase suppressor of Ras	yes	N/A	0.656	0.107	0.538	5e-29
Q6VAB6	950	Kinase suppressor of Ras	yes	N/A	0.656	0.108	0.538	6e-29
Q61097	873	Kinase suppressor of Ras	no	N/A	0.656	0.117	0.480	7e-25
Q8IVT5	921	Kinase suppressor of Ras	no	N/A	0.656	0.111	0.480	9e-25
P11346	782	Raf homolog serine/threon	no	N/A	0.662	0.132	0.490	4e-23
P28028	804	Serine/threonine-protein	no	N/A	0.662	0.129	0.5	1e-22
P10533	367	Serine/threonine-protein	N/A	N/A	0.662	0.283	0.5	1e-22
P27966	450	Serine/threonine-protein	N/A	N/A	0.662	0.231	0.5	2e-22
P34908	807	Serine/threonine-protein	N/A	N/A	0.662	0.128	0.5	2e-22
P15056	766	Serine/threonine-protein	no	N/A	0.662	0.135	0.5	2e-22

>sp|Q3UVC0|KSR2_MOUSE Kinase suppressor of Ras 2 OS=Mus musculus GN=Ksr2 PE=2 SV=2

 Score =  126 bits (316), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 1/104 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G+ IGKG FG VY+G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct: 678 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 736

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct: 737 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 780

Location-regulated scaffold connecting MEK to RAF. Blocks MAP3K8 kinase activity and MAP3K8-mediated signaling. Acts as a negative regulator of MAP3K3-mediated activation of ERK, JNK and NF-kappa-B pathways, inhibiting MAP3K3-mediated interleukin-8 production.
Mus musculus (taxid: 10090)

>sp|Q6VAB6|KSR2_HUMAN Kinase suppressor of Ras 2 OS=Homo sapiens GN=KSR2 PE=1 SV=2

 Score =  126 bits (316), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 1/104 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G+ IGKG FG VY+G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct: 668 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 726

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct: 727 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 770

Location-regulated scaffold connecting MEK to RAF. Blocks MAP3K8 kinase activity and MAP3K8-mediated signaling. Acts as a negative regulator of MAP3K3-mediated activation of ERK, JNK and NF-kappa-B pathways, inhibiting MAP3K3-mediated interleukin-8 production.

Homo sapiens (taxid: 9606)

>sp|Q61097|KSR1_MOUSE Kinase suppressor of Ras 1 OS=Mus musculus GN=Ksr1 PE=1 SV=1

 Score =  112 bits (281), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 73/104 (70%), Gaps = 1/104 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G+ IG+G +G V+ G WHGEVA+++L++D   ++   + FK EV  +R+TRHEN+VLFM
Sbjct: 565 LGEPIGQGRWGRVHRGRWHGEVAIRLLEMDG-HNQDHLKLFKKEVMNYRQTRHENVVLFM 623

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           GACM PPHLAI+TS C G TL++ +   K    +NK   + Q+I
Sbjct: 624 GACMNPPHLAIITSFCKGRTLHSFVRDPKTSLDINKTRQIAQEI 667

Location-regulated scaffolding protein connecting MEK to RAF. Promotes MEK and RAF phosphorylation and activity through assembly of an activated signaling complex. By itself, it has no demonstrated kinase activity.

Mus musculus (taxid: 10090)

>sp|Q8IVT5|KSR1_HUMAN Kinase suppressor of Ras 1 OS=Homo sapiens GN=KSR1 PE=1 SV=2

 Score =  112 bits (280), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 73/104 (70%), Gaps = 1/104 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G+ IG+G +G V+ G WHGEVA+++L++D  + +   + FK EV  +R+TRHEN+VLFM
Sbjct: 613 LGEPIGQGRWGRVHRGRWHGEVAIRLLEMDGHNQDHL-KLFKKEVMNYRQTRHENVVLFM 671

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           GACM PPHLAI+TS C G TL++ +   K    +NK   + Q+I
Sbjct: 672 GACMNPPHLAIITSFCKGRTLHSFVRDPKTSLDINKTRQIAQEI 715

Location-regulated scaffolding protein connecting MEK to RAF. Promotes MEK and RAF phosphorylation and activity through assembly of an activated signaling complex. By itself, it has no demonstrated kinase activity.

Homo sapiens (taxid: 9606)

>sp|P11346|KRAF1_DROME Raf homolog serine/threonine-protein kinase phl OS=Drosophila melanogaster GN=phl PE=1 SV=5

 Score =  107 bits (266), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/106 (49%), Positives = 71/106 (66%), Gaps = 2/106 (1%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY  +WHG VAVK L+V      +  +AFK EV   +KTRH N++LFM
Sbjct: 474 IGPRIGSGSFGTVYRAHWHGPVAVKTLNVKTPSPAQ-LQAFKNEVAMLKKTRHCNILLFM 532

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G C+  P LAIVT  C G +LY ++H+ + KF LN +  +G+Q++Q
Sbjct: 533 G-CVSKPSLAIVTQWCEGSSLYKHVHVSETKFKLNTLIDIGRQVAQ 577

Serine/threonine kinase required in the early embryo for the formation of terminal structure. Also required during the proliferation of imaginal cells. May act downstream of ras1 in the sev signal transduction pathway.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P28028|BRAF_MOUSE Serine/threonine-protein kinase B-raf OS=Mus musculus GN=Braf PE=1 SV=3

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 496 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFM 554

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 555 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 599

Involved in the transduction of mitogenic signals from the cell membrane to the nucleus. May play a role in the postsynaptic responses of hippocampal neuron.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P10533|RMIL_AVII1 Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 GN=V-RMIL PE=3 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 69  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFM 127

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 128 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 172

Galliformes (taxid: 8976)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P27966|RMIL_AVEVR Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 GN=V-RMIL PE=3 SV=1

 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 85  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 143

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 144 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 188

Galliformes (taxid: 8976)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P34908|BRAF_COTJA Serine/threonine-protein kinase B-raf OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 499 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFM 557

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 558 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 602

May play a role in transducing specific signals in neural cells.

Coturnix coturnix japonica (taxid: 93934)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P15056|BRAF_HUMAN Serine/threonine-protein kinase B-raf OS=Homo sapiens GN=BRAF PE=1 SV=4

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 459 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFM 517

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 518 GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 562

Involved in the transduction of mitogenic signals from the cell membrane to the nucleus. May play a role in the postsynaptic responses of hippocampal neuron.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
156548452	897	PREDICTED: kinase suppressor of Ras 1-li	0.675	0.118	0.719	5e-39
307212118	899	Kinase suppressor of Ras 2 [Harpegnathos	0.675	0.117	0.719	6e-39
345485975	920	PREDICTED: kinase suppressor of Ras 1-li	0.675	0.115	0.719	6e-39
242012658	945	predicted protein [Pediculus humanus cor	0.668	0.111	0.698	3e-38
328703467	727	PREDICTED: kinase suppressor of Ras 2-li	0.668	0.144	0.688	1e-37
383861184	900	PREDICTED: kinase suppressor of Ras 1-li	0.675	0.117	0.710	1e-37
380030129	906	PREDICTED: kinase suppressor of Ras 2-li	0.675	0.116	0.700	4e-37
328778880	920	PREDICTED: kinase suppressor of Ras 2 is	0.675	0.115	0.700	5e-37
307169064	901	Kinase suppressor of Ras 2 [Camponotus f	0.675	0.117	0.691	1e-36
340711827	913	PREDICTED: kinase suppressor of Ras 2-li	0.675	0.116	0.700	2e-36

>gi|156548452|ref|XP_001605076.1| PREDICTED: kinase suppressor of Ras 1-like isoform 1 [Nasonia vitripennis]

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 77/107 (71%), Positives = 90/107 (84%), Gaps = 1/107 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDY-LDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G+ IG G FGTVY GNWHG+VA+KVL++DY LDD+KT EAFKLEV TFRKTRHENLVLF
Sbjct: 607 IGEPIGTGRFGTVYRGNWHGDVAIKVLNMDYYLDDDKTLEAFKLEVATFRKTRHENLVLF 666

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           MGACMKPP LAIVTS   G TLYT+IH+ K+KF +NK + + QQISQ
Sbjct: 667 MGACMKPPRLAIVTSMSKGMTLYTHIHLRKDKFNMNKTTIIAQQISQ 713

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212118|gb|EFN87977.1| Kinase suppressor of Ras 2 [Harpegnathos saltator]

 Score =  165 bits (418), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 77/107 (71%), Positives = 90/107 (84%), Gaps = 1/107 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDY-LDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G+ IGKG FG VY GNWHG+VA+KVL++DY LDD+KT EAFKLEV TFRKTRHENLVLF
Sbjct: 609 IGEPIGKGRFGIVYRGNWHGDVAIKVLNMDYYLDDDKTLEAFKLEVATFRKTRHENLVLF 668

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           MGACMKPP LAIVTS   G TLYT+IH+ K+KF +NK + + QQISQ
Sbjct: 669 MGACMKPPRLAIVTSMSKGMTLYTHIHLLKDKFNMNKTTAIAQQISQ 715

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345485975|ref|XP_003425378.1| PREDICTED: kinase suppressor of Ras 1-like isoform 2 [Nasonia vitripennis]

 Score =  165 bits (417), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 77/107 (71%), Positives = 90/107 (84%), Gaps = 1/107 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDY-LDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G+ IG G FGTVY GNWHG+VA+KVL++DY LDD+KT EAFKLEV TFRKTRHENLVLF
Sbjct: 630 IGEPIGTGRFGTVYRGNWHGDVAIKVLNMDYYLDDDKTLEAFKLEVATFRKTRHENLVLF 689

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           MGACMKPP LAIVTS   G TLYT+IH+ K+KF +NK + + QQISQ
Sbjct: 690 MGACMKPPRLAIVTSMSKGMTLYTHIHLRKDKFNMNKTTIIAQQISQ 736

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242012658|ref|XP_002427046.1| predicted protein [Pediculus humanus corporis] gi|212511294|gb|EEB14308.1| predicted protein [Pediculus humanus corporis]

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 74/106 (69%), Positives = 86/106 (81%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +GD IG G FGTVY GNWHG+VA+KVL++DYLDDEK  +AFKLEV TFRKTRH+NLVLFM
Sbjct: 651 IGDSIGTGRFGTVYRGNWHGDVAIKVLNMDYLDDEKRLDAFKLEVATFRKTRHQNLVLFM 710

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           GACM P   AIVTS   G TLYT+IH+ K+KF +NK S + QQISQ
Sbjct: 711 GACMNPKSFAIVTSLSKGMTLYTHIHLRKDKFTMNKTSIIAQQISQ 756

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328703467|ref|XP_001951609.2| PREDICTED: kinase suppressor of Ras 2-like [Acyrthosiphon pisum]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/106 (68%), Positives = 89/106 (83%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           M D++G+GHFGTVY+GNWHG VA+KV+++DYLD EKT EAFK EV TFRKTRHENL+LFM
Sbjct: 438 MCDKLGEGHFGTVYSGNWHGPVAIKVINMDYLDYEKTLEAFKAEVATFRKTRHENLILFM 497

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           GACMK P LAIVTS  NG TLY +IH+ K+KF +++ + V QQISQ
Sbjct: 498 GACMKLPRLAIVTSLANGMTLYRHIHVLKDKFNMSRTTMVAQQISQ 543

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861184|ref|XP_003706066.1| PREDICTED: kinase suppressor of Ras 1-like [Megachile rotundata]

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/107 (71%), Positives = 88/107 (82%), Gaps = 1/107 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDY-LDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G+ IG G FGTVY G WHG VA+KVL++DY LDD+KT EAFKLEV TFRKTRHENLVLF
Sbjct: 610 IGEPIGTGRFGTVYRGYWHGNVAIKVLNMDYYLDDDKTLEAFKLEVATFRKTRHENLVLF 669

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           MGACMKPP LAIVTS   G TLYT+IH+ K+KF +NK + + QQISQ
Sbjct: 670 MGACMKPPRLAIVTSMSKGMTLYTHIHLRKDKFNMNKTTIIAQQISQ 716

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030129|ref|XP_003698708.1| PREDICTED: kinase suppressor of Ras 2-like [Apis florea]

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 87/107 (81%), Gaps = 1/107 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDY-LDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G+ IG G FGTVY G WHG VA+KVL++DY LDD+K  EAFKLEV TFRKTRHENLVLF
Sbjct: 609 IGEPIGTGRFGTVYRGYWHGNVAIKVLNMDYYLDDDKILEAFKLEVATFRKTRHENLVLF 668

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           MGACMKPP LAIVTS   G TLYT+IH+ K+KF +NK + + QQISQ
Sbjct: 669 MGACMKPPRLAIVTSMSKGMTLYTHIHLRKDKFNINKTTVIAQQISQ 715

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778880|ref|XP_393005.3| PREDICTED: kinase suppressor of Ras 2 isoform 1 [Apis mellifera]

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 87/107 (81%), Gaps = 1/107 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDY-LDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G+ IG G FGTVY G WHG VA+KVL++DY LDD+K  EAFKLEV TFRKTRHENLVLF
Sbjct: 609 IGEPIGTGRFGTVYRGYWHGNVAIKVLNMDYYLDDDKILEAFKLEVATFRKTRHENLVLF 668

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           MGACMKPP LAIVTS   G TLYT+IH+ K+KF +NK + + QQISQ
Sbjct: 669 MGACMKPPRLAIVTSMSKGMTLYTHIHLRKDKFNINKTTIIAQQISQ 715

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307169064|gb|EFN61908.1| Kinase suppressor of Ras 2 [Camponotus floridanus]

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/107 (69%), Positives = 88/107 (82%), Gaps = 1/107 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDY-LDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G+ IG G FGTVY GNWHG+VA+KV+++DY LD++K  EAFKLEV TFRKTRHENLVLF
Sbjct: 611 IGEPIGTGRFGTVYRGNWHGDVAIKVINMDYYLDNDKILEAFKLEVGTFRKTRHENLVLF 670

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           MGACMKPP LAIVTS   G TLYT+IH+ K+KF  NK + + QQISQ
Sbjct: 671 MGACMKPPRLAIVTSMSKGMTLYTHIHLRKDKFNTNKTTIIAQQISQ 717

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711827|ref|XP_003394470.1| PREDICTED: kinase suppressor of Ras 2-like [Bombus terrestris]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/107 (70%), Positives = 87/107 (81%), Gaps = 1/107 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDY-LDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G+ IG G FGTVY G WHG VA+KVL++DY L D+KT EAFKLEV TFRKTRHENLVLF
Sbjct: 609 IGEPIGIGRFGTVYRGYWHGNVAIKVLNMDYYLHDDKTLEAFKLEVATFRKTRHENLVLF 668

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           MGACMKPP LAIVTS   G TLYT+IH+ K+KF +NK + + QQISQ
Sbjct: 669 MGACMKPPRLAIVTSMSKGMTLYTHIHLRKDKFNMNKTTIIAQQISQ 715

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
FB|FBgn0015402	966	ksr "kinase suppressor of ras"	0.662	0.107	0.625	6.8e-47
ZFIN|ZDB-GENE-030131-8047	615	ksr2 "kinase suppressor of ras	0.656	0.167	0.528	6.6e-38
UNIPROTKB|F1RKG1	804	KSR2 "Uncharacterized protein"	0.656	0.128	0.538	3.5e-36
UNIPROTKB|F1NCU3	754	F1NCU3 "Uncharacterized protei	0.656	0.136	0.528	4.6e-36
UNIPROTKB|F1P721	949	KSR2 "Uncharacterized protein"	0.656	0.108	0.538	6.7e-36
RGD|1562674	899	Ksr2 "kinase suppressor of ras	0.656	0.114	0.538	8.9e-36
UNIPROTKB|E9PB13	921	KSR2 "Kinase suppressor of Ras	0.656	0.111	0.538	9.8e-36
UNIPROTKB|F1MF36	949	KSR2 "Uncharacterized protein"	0.656	0.108	0.538	1.1e-35
UNIPROTKB|Q6VAB6	950	KSR2 "Kinase suppressor of Ras	0.656	0.108	0.538	1.1e-35
MGI|MGI:3610315	959	Ksr2 "kinase suppressor of ras	0.656	0.107	0.538	1.1e-35

FB|FBgn0015402 ksr "kinase suppressor of ras" [Drosophila melanogaster (taxid:7227)]

 Score = 352 (129.0 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
 Identities = 65/104 (62%), Positives = 80/104 (76%)

Query:     3 DRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
             +RIG+G FGTV+   WHG+VAVK+L+ DYL DE   E F+ EV  F+ TRHENLVLFMGA
Sbjct:   683 ERIGQGRFGTVHRALWHGDVAVKLLNEDYLQDEHMLETFRSEVANFKNTRHENLVLFMGA 742

Query:    63 CMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
             CM PP+LAIVTS C G+TLYT IH  +EKFA+N+   + QQI+Q
Sbjct:   743 CMNPPYLAIVTSLCKGNTLYTYIHQRREKFAMNRTLLIAQQIAQ 786

GO:0004672 "protein kinase activity" evidence=ISS;NAS

GO:0007265 "Ras protein signal transduction" evidence=IGI

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0019992 "diacylglycerol binding" evidence=ISS

GO:0008595 "anterior/posterior axis specification, embryo" evidence=TAS

GO:0008293 "torso signaling pathway" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0007426 "tracheal outgrowth, open tracheal system" evidence=IMP

GO:0007165 "signal transduction" evidence=IDA

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

ZFIN|ZDB-GENE-030131-8047 ksr2 "kinase suppressor of ras 2" [Danio rerio (taxid:7955)]

 Score = 308 (113.5 bits), Expect = 6.6e-38, Sum P(2) = 6.6e-38
 Identities = 55/104 (52%), Positives = 77/104 (74%)

Query:     1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
             +G+ IGKG FG VY+G WHGEVA++++D++  D+E+  +AFK EV  +R TRHEN+VLFM
Sbjct:   330 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEEQLKAFKREVMAYRNTRHENVVLFM 388

Query:    61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             GACM+PPHLAI+TS C G TLY+ +   K    +NK   + Q++
Sbjct:   389 GACMRPPHLAIITSLCKGRTLYSVVRDAKVVLDVNKTRQIAQEM 432

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1RKG1 KSR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 309 (113.8 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
 Identities = 56/104 (53%), Positives = 77/104 (74%)

Query:     1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
             +G+ IGKG FG VY+G WHGEVA++++D++  D+E+  +AFK EV  +R+TRHEN+VLFM
Sbjct:   522 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEEQLKAFKREVMAYRQTRHENVVLFM 580

Query:    61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct:   581 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 624

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0019722 "calcium-mediated signaling" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1NCU3 F1NCU3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 303 (111.7 bits), Expect = 4.6e-36, Sum P(2) = 4.6e-36
 Identities = 55/104 (52%), Positives = 76/104 (73%)

Query:     1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
             +G+ IGKG FG V++G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct:   473 IGELIGKGRFGQVFHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 531

Query:    61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct:   532 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 575

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0019722 "calcium-mediated signaling" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

UNIPROTKB|F1P721 KSR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 309 (113.8 bits), Expect = 6.7e-36, Sum P(2) = 6.7e-36
 Identities = 56/104 (53%), Positives = 77/104 (74%)

Query:     1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
             +G+ IGKG FG VY+G WHGEVA++++D++  D+E+  +AFK EV  +R+TRHEN+VLFM
Sbjct:   668 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEEQLKAFKREVMAYRQTRHENVVLFM 726

Query:    61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct:   727 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 770

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0019722 "calcium-mediated signaling" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

RGD|1562674 Ksr2 "kinase suppressor of ras 2" [Rattus norvegicus (taxid:10116)]

 Score = 307 (113.1 bits), Expect = 8.9e-36, Sum P(2) = 8.9e-36
 Identities = 56/104 (53%), Positives = 76/104 (73%)

Query:     1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
             +G+ IGKG FG VY+G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct:   618 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 676

Query:    61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct:   677 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 720

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005622 "intracellular" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0019722 "calcium-mediated signaling" evidence=ISO

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E9PB13 KSR2 "Kinase suppressor of Ras 2" [Homo sapiens (taxid:9606)]

 Score = 307 (113.1 bits), Expect = 9.8e-36, Sum P(2) = 9.8e-36
 Identities = 56/104 (53%), Positives = 76/104 (73%)

Query:     1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
             +G+ IGKG FG VY+G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct:   639 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 697

Query:    61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct:   698 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 741

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0019722 "calcium-mediated signaling" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

UNIPROTKB|F1MF36 KSR2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 307 (113.1 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
 Identities = 56/104 (53%), Positives = 76/104 (73%)

Query:     1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
             +G+ IGKG FG VY+G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct:   668 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 726

Query:    61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct:   727 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 770

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0019722 "calcium-mediated signaling" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q6VAB6 KSR2 "Kinase suppressor of Ras 2" [Homo sapiens (taxid:9606)]

 Score = 307 (113.1 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
 Identities = 56/104 (53%), Positives = 76/104 (73%)

Query:     1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
             +G+ IGKG FG VY+G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct:   668 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 726

Query:    61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct:   727 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 770

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0019722 "calcium-mediated signaling" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IEA

MGI|MGI:3610315 Ksr2 "kinase suppressor of ras 2" [Mus musculus (taxid:10090)]

 Score = 307 (113.1 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
 Identities = 56/104 (53%), Positives = 76/104 (73%)

Query:     1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
             +G+ IGKG FG VY+G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct:   678 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 736

Query:    61 GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct:   737 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 780

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005078 "MAP-kinase scaffold activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005622 "intracellular" evidence=IGI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019722 "calcium-mediated signaling" evidence=IGI

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IDA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0043410 "positive regulation of MAPK cascade" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3UVC0	KSR2_MOUSE	No assigned EC number	0.5384	0.6560	0.1074	yes	N/A
Q6VAB6	KSR2_HUMAN	No assigned EC number	0.5384	0.6560	0.1084	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	157
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-18
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-11
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-11
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	5e-11
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-10
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-10
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-09
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-07
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	8e-07
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	9e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	9e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	8e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	8e-05
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	9e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	9e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-04
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	4e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	7e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	7e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.001
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.001
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.003
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.003
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	0.003
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	0.003
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.003
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.004
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	0.004
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.004
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.004
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	0.004

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 78.7 bits (195), Expect = 2e-18
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)

Query: 1   MGDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
           +G ++G+G FG VY G   G       +VAVK L       E+  E F  E +  +K  H
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGA--SEEEREEFLEEASIMKKLSH 60

Query: 54  ENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
            N+V  +G C +   L IVT    G  L   +  + EK  L  +  +  QI++
Sbjct: 61  PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAK 113

Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 1  MGDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
          +G ++G+G FG VY G   G       EVAVK L  D    E+  E F  E    RK  H
Sbjct: 3  LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKLDH 60

Query: 54 ENLVLFMGACMKPPHLAIVT 73
           N+V  +G C +   L IV 
Sbjct: 61 PNVVKLLGVCTEEEPLYIVM 80

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 5/105 (4%)

Query: 5   IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           +G+G FGTVY         +VA+K++  +  D     E    E+   +K  H N+V   G
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKE--DSSSLLEELLREIEILKKLNHPNIVKLYG 58

Query: 62  ACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
                 HL +V   C G +L   +   + K + +++  +  QI +
Sbjct: 59  VFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILE 103

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 59.1 bits (144), Expect = 3e-11
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 1  MGDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
          +G ++G+G FG VY G   G       EVAVK L  D  + +   E F  E    RK  H
Sbjct: 3  LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQI--EEFLREARIMRKLDH 60

Query: 54 ENLVLFMGACMKPPHLAIVT 73
           N+V  +G C +   L IV 
Sbjct: 61 PNIVKLLGVCTEEEPLMIVM 80

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 58.7 bits (143), Expect = 4e-11
 Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 6/107 (5%)

Query: 1   MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           + +++G+G FG VY   +      VA+KV+    +  ++  E    E+   +K +H N+V
Sbjct: 3   ILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDR--ERILREIKILKKLKHPNIV 60

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
                      L +V   C G  L+  +     + + ++     +QI
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRG-RLSEDEARFYLRQI 106

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 58.6 bits (142), Expect = 5e-11
 Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 5/77 (6%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
          +G  IGKG FG V  G++ G+ VAVK L     DD    +AF  E +     RH NLV  
Sbjct: 10 LGATIGKGEFGDVMLGDYRGQKVAVKCLK----DDSTAAQAFLAEASVMTTLRHPNLVQL 65

Query: 60 MGACMKPPHLAIVTSKC 76
          +G  ++   L IVT   
Sbjct: 66 LGVVLQGNPLYIVTEYM 82

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 2  GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
            ++G G FGTVY     G    VAVK+L       +K  +  + E+   R+  H N+V 
Sbjct: 4  LRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKK-DQTARREIRILRRLSHPNIVR 62

Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIH 86
           + A     HL +V   C G  L+  + 
Sbjct: 63 LIDAFEDKDHLYLVMEYCEGGDLFDYLS 90

Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 56.0 bits (136), Expect = 4e-10
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 3  DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           ++G+G FG VY G   G      EVAVK L  D  ++E+  + F  E    +K  H N+
Sbjct: 1  KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEER--KDFLKEARVMKKLGHPNV 58

Query: 57 VLFMGACMKPPHLAIVT 73
          V  +G C +   L +V 
Sbjct: 59 VRLLGVCTEEEPLYLVL 75

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 53.0 bits (128), Expect = 5e-09
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 6/105 (5%)

Query: 3   DRIGKGHFGTVYNG---NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           ++IGKG FG VY         EVA+KV+    L+ ++  E    E+   +K +H N+V +
Sbjct: 6   EKIGKGGFGEVYKARHKRTGKEVAIKVIK---LESKEKKEKIINEIQILKKCKHPNIVKY 62

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
            G+ +K   L IV   C+G +L   +    +    ++++ V +++
Sbjct: 63  YGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKEL 107

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 6/101 (5%)

Query: 3   DRIGKGHFGTVYNG--NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           ++IGKG+FG VY G    + EVAVK        D K    F  E    ++  H N+V  +
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLK--RKFLQEAEILKQYDHPNIVKLI 58

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVG 101
           G C++   + IV     G +L T   + K+K  L     + 
Sbjct: 59  GVCVQKQPIYIVMELVPGGSLLT--FLRKKKNRLTVKKLLQ 97

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 47.4 bits (113), Expect = 5e-07
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 1  MGDRIGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
          +  ++G G+FG V+ G W     VA+K+L     DD    + F+ EV   ++ RH++L+ 
Sbjct: 10 LERKLGSGYFGEVWEGLWKNRVRVAIKILKS---DDLLKQQDFQKEVQALKRLRHKHLIS 66

Query: 59 FMGACMKPPHLAIVT 73
              C     + I+T
Sbjct: 67 LFAVCSVGEPVYIIT 81

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 47.4 bits (113), Expect = 5e-07
 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)

Query: 5  IGKGHFGTVY------NGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          +G+GHFG V        G+  GE VAVK L+    +  ++   F+ E+   R   HEN+V
Sbjct: 12 LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRS--DFEREIEILRTLDHENIV 69

Query: 58 LFMGACMKP 66
           + G C KP
Sbjct: 70 KYKGVCEKP 78

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 46.9 bits (111), Expect = 8e-07
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 6/62 (9%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
          +G+ IG+G FG V  G + G+ VAVK +  D      T +AF  E     K  H+NLV  
Sbjct: 10 LGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRL 64

Query: 60 MG 61
          +G
Sbjct: 65 LG 66

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 1  MGDRIGKGHFGTVYNGNW--HGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W  +   VAVK L     +D    E F  E    ++ +H NLV
Sbjct: 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----EDTMEVEEFLKEAAVMKEIKHPNLV 65

Query: 58 LFMGACMKPPHLAIVTS-KCNGHTL 81
            +G C + P   I+T     G+ L
Sbjct: 66 QLLGVCTREPPFYIITEFMTYGNLL 90

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 1  MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
          +  ++G G FG V+ G W+G  +VAVK L    +      EAF  E    +K RH+ LV 
Sbjct: 10 LERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP----EAFLQEAQIMKKLRHDKLVQ 65

Query: 59 FMGACMKPPHLAIVT 73
              C +   + IVT
Sbjct: 66 LYAVCSEEEPIYIVT 80

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 44.5 bits (105), Expect = 4e-06
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 5/75 (6%)

Query: 2  GDRIGKGHFGTVYNG--NWHGEVAVK--VLDV-DYLDDEKTWEAFKLEVTTFRKTRHENL 56
          G+ +GKG +GTVY G  N    +AVK   LD  + L  EK +E  + EV   +  +H N+
Sbjct: 5  GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI 64

Query: 57 VLFMGACMKPPHLAI 71
          V ++G C+    ++I
Sbjct: 65 VQYLGTCLDDNTISI 79

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 44.3 bits (105), Expect = 5e-06
 Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 3  DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           ++G G FG V  G W         VAVK L  D L D    + F  E        HENL
Sbjct: 1  KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSD--IMDDFLKEAAIMHSLDHENL 58

Query: 57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIH 86
          +   G  +  P L +VT      +L   + 
Sbjct: 59 IRLYGVVLTHP-LMMVTELAPLGSLLDRLR 87

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 44.7 bits (104), Expect = 6e-06
 Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 3/103 (2%)

Query: 5   IGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE-NLVLFMGAC 63
           +G+G FG VY       VA+KVL        K  E F  E+       H  N+V      
Sbjct: 8   LGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF 67

Query: 64  MKPPHLAIVTSKCNGHTL--YTNIHIYKEKFALNKMSTVGQQI 104
                L +V    +G +L         K   + ++   +  QI
Sbjct: 68  QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQI 110

Length = 384

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 43.7 bits (104), Expect = 9e-06
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 10/68 (14%)

Query: 2  GDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN 55
          G+ +G+G FG+VY       G     +AVK +++   D E+  EA + E+      +H N
Sbjct: 5  GELLGRGSFGSVYLALDKDTG---ELMAVKSVELSG-DSEEELEALEREIRILSSLQHPN 60

Query: 56 LVLFMGAC 63
          +V + G+ 
Sbjct: 61 IVRYYGSE 68

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 9e-06
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G G FG V+ G W+    VAVK L    +D     + F  E    +K RH  L+    
Sbjct: 13 KLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDP----KDFLAEAQIMKKLRHPKLIQLYA 68

Query: 62 ACMKPPHLAIVT 73
           C     + IVT
Sbjct: 69 VCTLEEPIYIVT 80

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 5  IGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDE--KTWEAFKLEVTTFRKTRHENLVLF 59
          IG+G +G VY G     G  VA+K++++D  DD+         L ++  R+++  N+  +
Sbjct: 9  IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVAL-LSQLRQSQPPNITKY 67

Query: 60 MGACMKPPHLAIVTSKCNGHTLYT 83
           G+ +K P L I+     G ++ T
Sbjct: 68 YGSYLKGPRLWIIMEYAEGGSVRT 91

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 2  GDRIGKGHFGTVYNG-NWH-GE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
          GD IG+G FG VY G N   G+ VA+K + ++ + +E   ++   E+   +  +H N+V 
Sbjct: 5  GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEAL-KSIMQEIDLLKNLKHPNIVK 63

Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIH 86
          ++G+      L I+       +L   I 
Sbjct: 64 YIGSIETSDSLYIILEYAENGSLRQIIK 91

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 2  GDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
          G++IG G FG VY   N +    +AVK + +    D KT +    E+      +H NLV 
Sbjct: 5  GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLKHPNLVK 63

Query: 59 FMGACMKPPHLAIVTSKCNGHTL 81
          + G  +    + I    C+G TL
Sbjct: 64 YYGVEVHREKVYIFMEYCSGGTL 86

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 41.0 bits (96), Expect = 8e-05
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 5  IGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
          +G G FG V  G W G+  VA+K++    + +++    F  E     K  HE LV   G 
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMKLSHEKLVQLYGV 67

Query: 63 CMKPPHLAIVT 73
          C K   + IVT
Sbjct: 68 CTKQRPIYIVT 78

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 40.9 bits (96), Expect = 8e-05
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 5  IGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
          IGKGHFG VY+G            AVK L  + + D +  E F  E    +   H N++ 
Sbjct: 3  IGKGHFGCVYHGTLIDSDGQKIHCAVKSL--NRITDLEEVEQFLKEGIIMKDFSHPNVLS 60

Query: 59 FMGACMKPPHLAIV 72
           +G C+      +V
Sbjct: 61 LLGICLPSEGSPLV 74

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 40.9 bits (96), Expect = 9e-05
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 5  IGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
          +G G FG V+ G W G  +VA+K++    + ++   E    E     K  H NLV   G 
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIE----EAKVMMKLSHPNLVQLYGV 67

Query: 63 CMKPPHLAIVT 73
          C K   + IVT
Sbjct: 68 CTKQRPIFIVT 78

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 40.6 bits (96), Expect = 9e-05
 Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 29/143 (20%)

Query: 5   IGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           IGKG FG VY      +G       +K +D+  + +++  +A   EV   +K  H N++ 
Sbjct: 8   IGKGSFGKVYLVRRKSDGK---LYVLKEIDLSNMSEKEREDALN-EVKILKKLNHPNIIK 63

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPS 118
           +  +  +   L IV    +G  L   I   K++         G+   ++ ++  W     
Sbjct: 64  YYESFEEKGKLCIVMEYADGGDLSQKIKKQKKE---------GKPFPEEQILD-W----- 108

Query: 119 DRPDFITLMKSLEKLPKKRILAR 141
               F+ L  +L+ L  ++IL R
Sbjct: 109 ----FVQLCLALKYLHSRKILHR 127

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G+G FG V+ G W+G   VA+K L    +      EAF  E    +K RHE LV    
Sbjct: 13 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 68

Query: 62 ACMKPPHLAIVT 73
             + P + IVT
Sbjct: 69 VVSEEP-IYIVT 79

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 1  MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
          +G  IG+G FG VY G +         VAVK          +  E F  E    R+  H 
Sbjct: 10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR--EKFLQEAYIMRQFDHP 67

Query: 55 NLVLFMGACMKPP 67
          ++V  +G   + P
Sbjct: 68 HIVKLIGVITENP 80

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 6/81 (7%)

Query: 4  RIGKGHFGTVYNG-NWH-GE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
          RIG G +G VY   +   GE VA+KV+    L+    +E  + E++  ++ RH N+V + 
Sbjct: 10 RIGSGTYGDVYKARDIATGELVAIKVIK---LEPGDDFEIIQQEISMLKECRHPNIVAYF 66

Query: 61 GACMKPPHLAIVTSKCNGHTL 81
          G+ ++   L IV   C G +L
Sbjct: 67 GSYLRRDKLWIVMEYCGGGSL 87

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 9/79 (11%)

Query: 2  GDRIGKGHFGTVYNG--NWHGEV-AVKVLDVDYLDDE------KTWEAFKLEVTTFRKTR 52
          G  IG G FG+VY G     GE+ AVK +++  +            +A   E+   ++ +
Sbjct: 5  GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ 64

Query: 53 HENLVLFMGACMKPPHLAI 71
          HEN+V ++G+ +   HL I
Sbjct: 65 HENIVQYLGSSLDADHLNI 83

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 5  IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          IGKG FG V  G++ G +VAVK +  D      T +AF  E +   + RH NLV  +G
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLG 66

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 10/74 (13%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE----VAVKVLDVDYLDDEKTWEAFKLEVTTFRK-TRHEN 55
          + + IG+G +G VY    H +    VA+K++D+   +DE+  E  K E    RK + H N
Sbjct: 10 LVEVIGEGTYGKVYKAR-HKKTGQLVAIKIMDII--EDEE--EEIKEEYNILRKYSNHPN 64

Query: 56 LVLFMGACMKPPHL 69
          +  F GA +K    
Sbjct: 65 IATFYGAFIKKNPP 78

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 3  DRIGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
          +RIGKG FG VY G  N   E VA+K++D++  +DE   E  + E+T   +     +  +
Sbjct: 10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDE--IEDIQQEITVLSQCDSPYITRY 67

Query: 60 MGACMKPPHLAIVTSKCNG 78
           G+ +K   L I+     G
Sbjct: 68 YGSYLKGTKLWIIMEYLGG 86

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 11/76 (14%)

Query: 5  IGKGHFGTVYNGNWHGE--------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
          +G+G FG V+     G         V VK L      DE     F+ E+  FRK  H+N+
Sbjct: 13 LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQ--KTKDENLQSEFRRELDMFRKLSHKNV 70

Query: 57 VLFMGACM-KPPHLAI 71
          V  +G C    PH  I
Sbjct: 71 VRLLGLCREAEPHYMI 86

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 5  IGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
          +G+G FG VY G   G         VA+K L  +     K  + F+ E       +H N+
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE--PKVQQEFRQEAELMSDLQHPNI 70

Query: 57 VLFMGACMK 65
          V  +G C K
Sbjct: 71 VCLLGVCTK 79

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 9/101 (8%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
            G  +G G FG V     +G        +VAVK+L       E+     +L++ +     
Sbjct: 39  FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGN- 97

Query: 53  HENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFA 93
           HEN+V  +GAC     + ++T  C    L   +   +E F 
Sbjct: 98  HENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFL 138

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)

Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G+G FG V+ G W+G  +VA+K L    +      EAF  E    +K RH+ LV    
Sbjct: 13 KLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMP----EAFLQEAQIMKKLRHDKLVPLYA 68

Query: 62 ACMKPPHLAIVT 73
             + P + IVT
Sbjct: 69 VVSEEP-IYIVT 79

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G G FG V+ G W+G  +VAVK L    +      E+F  E    +K RH+ LV    
Sbjct: 13 KLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSP----ESFLEEAQIMKKLRHDKLVQLYA 68

Query: 62 ACMKPPHLAIVT 73
             + P + IVT
Sbjct: 69 VVSEEP-IYIVT 79

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
           +G  +G G FG V  G  +G        +VAVK+L       EK     +L++ T     
Sbjct: 41  LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGP- 99

Query: 53  HENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKF 92
           H N+V  +GAC K   + I+T  C    L   +H  ++ F
Sbjct: 100 HLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNF 139

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 5  IGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
          IG G FG V+ G W    +VA+K +    + +E     F  E     K  H  LV   G 
Sbjct: 12 IGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEED----FIEEAQVMMKLSHPKLVQLYGV 67

Query: 63 CMKPPHLAIV 72
          C +   + +V
Sbjct: 68 CTERSPICLV 77

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
           +G  +G G FG V     HG        +VAVK+L       EK     +L++ +     
Sbjct: 41  LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGP- 99

Query: 53  HENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKF 92
           H N+V  +GAC K   + I+T  C    L   +H  K  F
Sbjct: 100 HLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTF 139

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 4  RIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
          RIG G +G VY   N N     A+KV+ ++  +D   +   + E+   +  +H N+V + 
Sbjct: 16 RIGSGTYGDVYKARNVNTGELAAIKVIKLEPGED---FAVVQQEIIMMKDCKHSNIVAYF 72

Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHI 87
          G+ ++   L I    C G +L    H+
Sbjct: 73 GSYLRRDKLWICMEFCGGGSLQDIYHV 99

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)

Query: 4  RIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           IGKG FG VY          VA+KV+D++  +DE   E  + E+    + R   +  + 
Sbjct: 8  CIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDE--IEDIQQEIQFLSQCRSPYITKYY 65

Query: 61 GACMKPPHLAIVTSKCNG 78
          G+ +K   L I+   C G
Sbjct: 66 GSFLKGSKLWIIMEYCGG 83

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 11/109 (10%)

Query: 3   DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           ++IG+G  G VY         EVA+K + +     ++  E    E+   +  +H N+V +
Sbjct: 25  EKIGEGASGEVYKATDRATGKEVAIKKMRLR----KQNKELIINEILIMKDCKHPNIVDY 80

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALN--KMSTVGQQISQ 106
             + +    L +V    +G +L T+I I +    +N  +++ V +++ Q
Sbjct: 81  YDSYLVGDELWVVMEYMDGGSL-TDI-ITQNFVRMNEPQIAYVCREVLQ 127

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 3  DRIGKGHFGTVYNG---NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
          +RIGKG FG V+ G        VA+K++D++  +DE   E  + E+T   +     +  +
Sbjct: 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDE--IEDIQQEITVLSQCDSPYVTKY 67

Query: 60 MGACMKPPHLAIVTSKCNG 78
           G+ +K   L I+     G
Sbjct: 68 YGSYLKGTKLWIIMEYLGG 86

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 108 VLMKCWSYKPSDRPDFITLMKSL 130
           V+ +CW YKP +RP F  L K L
Sbjct: 226 VMQRCWDYKPENRPKFSELQKEL 248

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
              +G G FGTVY G W  E       VA+KVL  +     K  +    E        H
Sbjct: 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREE--TSPKANKEILDEAYVMASVDH 68

Query: 54 ENLVLFMGACMKPPHLAI 71
           ++V  +G C+      I
Sbjct: 69 PHVVRLLGICLSSQVQLI 86

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 4  RIGKGHFGTVYNG-NWH-GEVA-VKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
          R+G G +G VY   N H GE+A VK++ ++  DD   +   + E+   ++ +H N+V + 
Sbjct: 16 RVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDD---FSLIQQEIFMVKECKHCNIVAYF 72

Query: 61 GACMKPPHLAIVTSKCNGHTLYTNIHI 87
          G+ +    L I    C G +L    H+
Sbjct: 73 GSYLSREKLWICMEYCGGGSLQDIYHV 99

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 35.8 bits (83), Expect = 0.004
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 107 DVLMKCWSYKPSDRPDFITL 126
            +++ CW Y+P DRP F  L
Sbjct: 229 SIMLSCWKYRPEDRPTFSEL 248

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 23/156 (14%)

Query: 4   RIGKGHFGTVYNGNW---HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +IG+G F  VY          VA+K + +  L D K       E+   ++  H N++ + 
Sbjct: 9   KIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 68

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDR 120
            + ++   L IV    +   L   I  +K++  L    TV            W Y     
Sbjct: 69  ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTV------------WKY----- 111

Query: 121 PDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESV 156
             F+ L  +LE +  +R++ R    P N+  +A  V
Sbjct: 112 --FVQLCSALEHMHSRRVMHRDIK-PANVFITATGV 144

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	157
KOG0595|consensus	429		100.0
KOG0615|consensus	475		99.96
KOG0575|consensus	592		99.96
KOG0581|consensus	364		99.95
KOG0192|consensus	362		99.95
KOG0598|consensus	357		99.95
KOG0600|consensus	560		99.94
KOG0193|consensus	678		99.94
KOG0610|consensus	459		99.94
KOG0592|consensus	604		99.94
KOG0194|consensus	474		99.94
KOG0580|consensus	281		99.94
KOG0197|consensus	468		99.93
KOG0591|consensus	375		99.93
KOG1187|consensus	361		99.93
KOG0616|consensus	355		99.93
KOG0611|consensus	668		99.93
KOG0605|consensus	550		99.93
KOG0198|consensus	313		99.92
KOG0583|consensus	370		99.92
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.92
KOG0661|consensus	538		99.91
KOG0597|consensus	808		99.91
KOG0589|consensus	426		99.91
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.91
KOG0593|consensus	396		99.91
KOG0659|consensus	318		99.91
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.91
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.91
KOG0032|consensus	382		99.91
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.91
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.91
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.91
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.91
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.91
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.91
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.91
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.9
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.9
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.9
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.9
KOG0586|consensus	596		99.9
KOG0663|consensus	419		99.9
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.9
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.9
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.9
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.9
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.9
KOG0582|consensus	516		99.9
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.9
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.9
KOG0594|consensus	323		99.89
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.89
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.89
KOG4250|consensus	732		99.89
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.89
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.89
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.89
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.89
KOG0574|consensus	502		99.89
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.89
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.89
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.89
KOG0588|consensus	786		99.89
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.89
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.89
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.89
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.89
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.89
KOG0694|consensus	694		99.89
KOG1989|consensus	738		99.89
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.89
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.89
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.89
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.89
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.89
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.88
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.88
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.88
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.88
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.88
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.88
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.88
KOG0585|consensus	576		99.88
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.88
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.88
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.88
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.88
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.88
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.88
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.88
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.88
KOG4717|consensus	864		99.88
KOG1026|consensus	774		99.88
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.88
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.88
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.88
KOG1095|consensus	1025		99.88
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.88
KOG0607|consensus	463		99.88
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.88
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.88
KOG0196|consensus	996		99.88
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.88
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.88
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.87
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.87
KOG0578|consensus	550		99.87
KOG4721|consensus	904		99.87
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.87
PTZ00267	478	NIMA-related protein kinase; Provisional	99.87
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.87
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.87
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.87
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.87
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.87
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.87
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.87
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.87
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.87
PHA02988	283	hypothetical protein; Provisional	99.87
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.87
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.87
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.87
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.87
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.87
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.86
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.86
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.86
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.86
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.86
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.86
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.86
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.86
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.86
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.86
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.86
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.86
KOG0579|consensus	1187		99.86
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.86
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.86
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.86
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.86
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.86
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.86
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.86
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.86
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.86
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.86
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.86
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.85
KOG0033|consensus	355		99.85
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.85
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.85
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.85
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.85
KOG4257|consensus	974		99.85
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.85
KOG1094|consensus	807		99.85
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.85
KOG0662|consensus	292		99.85
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.85
KOG0577|consensus	948		99.85
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.85
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.85
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.85
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.85
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.85
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.85
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.85
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.85
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.85
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.85
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.85
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.85
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.85
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.85
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.85
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.85
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.85
PHA03212	391	serine/threonine kinase US3; Provisional	99.85
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.85
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.85
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.85
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.85
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.85
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.85
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.85
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.85
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.85
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.85
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.84
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.84
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.84
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.84
KOG4236|consensus	888		99.84
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.84
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.84
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.84
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.84
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.84
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.84
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.84
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.84
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.84
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.84
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.84
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.84
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.84
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.84
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.84
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.84
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.84
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.84
KOG0201|consensus	467		99.84
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.84
KOG3653|consensus	534		99.84
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.84
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.84
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.84
KOG4279|consensus	1226		99.84
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.84
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.84
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.84
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.84
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.84
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.83
PTZ00283	496	serine/threonine protein kinase; Provisional	99.83
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.83
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.83
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.83
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.83
KOG0660|consensus	359		99.83
PHA03211	461	serine/threonine kinase US3; Provisional	99.83
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.83
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.83
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.83
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.83
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.83
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.83
PHA03209	357	serine/threonine kinase US3; Provisional	99.83
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.83
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.83
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.83
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.83
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.83
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.83
KOG0612|consensus	1317		99.83
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.83
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.83
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.83
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.83
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.83
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.83
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.83
KOG1025|consensus	1177		99.83
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.82
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.82
KOG0667|consensus	586		99.82
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.82
KOG4278|consensus	1157		99.82
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.82
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.82
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.82
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.82
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.82
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.82
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.82
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.82
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.82
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.82
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.82
PHA03207	392	serine/threonine kinase US3; Provisional	99.82
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.82
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.82
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.82
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.82
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.82
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.82
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.82
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.82
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.82
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.82
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.81
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.81
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.81
KOG0584|consensus	632		99.81
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.81
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.81
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.81
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.81
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.81
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.81
KOG0658|consensus	364		99.81
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.81
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.81
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.81
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.81
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.81
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.81
KOG0599|consensus	411		99.81
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.81
KOG1035|consensus	1351		99.81
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.81
KOG0690|consensus	516		99.81
KOG0199|consensus	1039		99.81
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.81
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.8
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.8
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.8
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.8
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.8
KOG1152|consensus	772		99.8
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.8
PTZ00036	440	glycogen synthase kinase; Provisional	99.8
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.8
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.8
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.8
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.8
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.8
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.8
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.79
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.79
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.79
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.79
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.79
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.79
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.79
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.79
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.79
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.79
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.79
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.79
PRK10345	210	hypothetical protein; Provisional	99.78
KOG0666|consensus	438		99.78
PLN00009	294	cyclin-dependent kinase A; Provisional	99.78
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.78
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.78
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.78
KOG0604|consensus	400		99.78
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.78
PTZ00284	467	protein kinase; Provisional	99.78
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.78
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.78
KOG0695|consensus	593		99.78
KOG2345|consensus	302		99.78
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.78
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.78
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.78
KOG2052|consensus	513		99.78
KOG0576|consensus	829		99.77
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.77
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.77
PHA03210	501	serine/threonine kinase US3; Provisional	99.77
KOG4645|consensus	1509		99.77
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.77
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.77
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.77
KOG0608|consensus	1034		99.77
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.76
PRK09188	365	serine/threonine protein kinase; Provisional	99.76
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.76
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.76
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.76
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.76
KOG0587|consensus	953		99.76
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.76
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.76
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.75
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.75
KOG0696|consensus	683		99.75
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.75
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.75
KOG0986|consensus	591		99.75
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.75
KOG0200|consensus	609		99.75
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.75
KOG0614|consensus	732		99.74
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.74
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.74
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.74
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.73
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.73
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.71
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.7
KOG0669|consensus	376		99.69
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.68
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.68
KOG1151|consensus	775		99.67
KOG0983|consensus	391		99.66
KOG0596|consensus	677		99.66
KOG1006|consensus	361		99.66
PRK14879	211	serine/threonine protein kinase; Provisional	99.66
KOG0668|consensus	338		99.65
KOG1345|consensus	378		99.64
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.63
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.63
PHA02882	294	putative serine/threonine kinase; Provisional	99.63
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.62
KOG1167|consensus	418		99.61
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.61
KOG0603|consensus	612		99.6
KOG0984|consensus	282		99.59
KOG0664|consensus	449		99.57
KOG1290|consensus	590		99.57
KOG1163|consensus	341		99.56
KOG0671|consensus	415		99.56
smart00090	237	RIO RIO-like kinase.	99.56
KOG1164|consensus	322		99.55
KOG1027|consensus	903		99.55
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.55
PRK12274	218	serine/threonine protein kinase; Provisional	99.53
KOG1165|consensus	449		99.5
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.46
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.44
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.38
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.37
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.37
KOG1166|consensus	974		99.36
KOG0665|consensus	369		99.36
KOG1024|consensus	563		99.33
KOG0195|consensus	448		99.31
KOG0670|consensus	752		99.17
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.15
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.02
PLN00181	793	protein SPA1-RELATED; Provisional	98.97
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.92
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.89
KOG0590|consensus	601		98.88
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.76
KOG3087|consensus	229		98.76
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.73
KOG0603|consensus	612		98.72
KOG1240|consensus	1431		98.65
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.5
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.41
KOG4158|consensus	598		98.38
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.26
KOG0601|consensus	524		98.19
PLN02876	822	acyl-CoA dehydrogenase	98.19
KOG0590|consensus	601		98.17
KOG1235|consensus	538		98.1
KOG1023|consensus	484		98.07
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.97
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.93
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.83
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.82
PRK09902	216	hypothetical protein; Provisional	97.78
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.7
KOG3741|consensus	655		97.69
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.67
KOG0601|consensus	524		97.6
KOG1243|consensus	690		97.53
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.4
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.23
KOG1266|consensus	458		97.2
KOG0193|consensus	678		97.19
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	97.18
KOG0606|consensus	1205		97.09
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.0
PF01636	239	APH: Phosphotransferase enzyme family This family	96.88
KOG1033|consensus	516		96.81
PRK10593	297	hypothetical protein; Provisional	96.69
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	96.59
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.44
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.37
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.32
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.13
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.08
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	95.41
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.9
KOG1236|consensus	565		94.51
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	94.49
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.3
KOG0576|consensus	829		94.2
KOG2270|consensus	520		93.89
PF07914	414	DUF1679: Protein of unknown function (DUF1679); In	93.75
PRK05231	319	homoserine kinase; Provisional	93.71
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	93.62
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	93.4
PRK09550	401	mtnK methylthioribose kinase; Reviewed	93.4
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	93.37
KOG0192|consensus	362		93.09
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	92.96
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	92.69
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	92.63
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	92.42
KOG0606|consensus	1205		92.39
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	92.39
PLN02236	344	choline kinase	92.35
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	92.01
PHA02988	283	hypothetical protein; Provisional	91.88
KOG0197|consensus	468		91.86
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	91.36
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	91.33
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	91.11
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	91.03
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	90.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	90.82
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	90.73

>KOG0595|consensus

Probab=100.00  E-value=6.4e-32  Score=189.48  Aligned_cols=128  Identities=23%  Similarity=0.342  Sum_probs=118.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|+++.   .+|+|.+.+.. ...+..+.+..|+.+++.++|||||.++++...++.+|+|||||+|
T Consensus        15 ~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~-l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~g   93 (429)
T KOG0595|consen   15 SREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKK-LNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNG   93 (429)
T ss_pred             hhhccCcceEEEEEeEeccCCceEEeeeehhhc-cCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCC
Confidence            4679999999999999977   49999998865 3677888999999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |||.++++.++ .+++..+..++.|++.                      +++.+|+++|+|||+|+.|+|....
T Consensus        94 GDLs~yi~~~~-~l~e~t~r~Fm~QLA~----------------------alq~L~~~~IiHRDLKPQNiLLs~~  145 (429)
T KOG0595|consen   94 GDLSDYIRRRG-RLPEATARHFMQQLAS----------------------ALQFLHENNIIHRDLKPQNILLSTT  145 (429)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeccCCcceEEeccC
Confidence            99999999876 8999999999999999                      8888999999999999999998764

>KOG0615|consensus

Probab=99.96  E-value=1.4e-28  Score=173.09  Aligned_cols=131  Identities=18%  Similarity=0.195  Sum_probs=112.2

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHH----HHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEK----TWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      +.+.||+|+||.|.+|..++   .+|+|++++......+    ......+|+.+|++++|||||++++++..+++.|+||
T Consensus       176 i~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVl  255 (475)
T KOG0615|consen  176 ISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVL  255 (475)
T ss_pred             eeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEE
Confidence            35789999999999998876   4999999876643211    2334679999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||++||+|.+.+-..+ .+.+.....++.|++.                      ++.|+|++||+|||+||.|+|....
T Consensus       256 E~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~----------------------avkYLH~~GI~HRDiKPeNILl~~~  312 (475)
T KOG0615|consen  256 EYVEGGELFDKVVANK-YLREDLGKLLFKQLLT----------------------AVKYLHSQGIIHRDIKPENILLSND  312 (475)
T ss_pred             EEecCccHHHHHHhcc-ccccchhHHHHHHHHH----------------------HHHHHHHcCcccccCCcceEEeccC
Confidence            9999999999998876 7888877777776666                      8888999999999999999998877


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       313 ~  313 (475)
T KOG0615|consen  313 A  313 (475)
T ss_pred             C
Confidence            4

>KOG0575|consensus

Probab=99.96  E-value=2.9e-28  Score=178.17  Aligned_cols=129  Identities=24%  Similarity=0.258  Sum_probs=119.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+|+.||.++...   .+|+|++++..+.....++++.+|+.+.+.++|||||+++++|++..++|++.|+|+.
T Consensus        23 g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~  102 (592)
T KOG0575|consen   23 GRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHR  102 (592)
T ss_pred             eeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCC
Confidence            5789999999999999833   4999999988777788899999999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|..++++++ .+++++++.++.||+.                      ++.|+|+.+|+|||+|-+|+|..+.
T Consensus       103 ~sL~el~Krrk-~ltEpEary~l~QIv~----------------------GlkYLH~~~IiHRDLKLGNlfL~~~  154 (592)
T KOG0575|consen  103 GSLMELLKRRK-PLTEPEARYFLRQIVE----------------------GLKYLHSLGIIHRDLKLGNLFLNEN  154 (592)
T ss_pred             ccHHHHHHhcC-CCCcHHHHHHHHHHHH----------------------HHHHHHhcCceecccchhheeecCc
Confidence            99999999655 8999999999998777                      8888999999999999999998764

>KOG0581|consensus

Probab=99.95  E-value=9.7e-28  Score=166.81  Aligned_cols=130  Identities=20%  Similarity=0.245  Sum_probs=116.6

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc-eEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH-LAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~e~~~   77 (157)
                      ++.||+|+.|.|+++.++.+   +|+|.+...  .++...++..+|+.++..++|||||.+||+|..++. +.|+||||+
T Consensus        84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD  161 (364)
T KOG0581|consen   84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD  161 (364)
T ss_pred             hhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence            46799999999999999873   999999554  667888999999999999999999999999999995 999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCcccccccccCC
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSAESV  156 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~~~~  156 (157)
                      +|+|.+.+...+ .+++.....++.+|++                      +|.|+|+ ++|+|||+|+.|+|..|.+.+
T Consensus       162 gGSLd~~~k~~g-~i~E~~L~~ia~~VL~----------------------GL~YLh~~~~IIHRDIKPsNlLvNskGeV  218 (364)
T KOG0581|consen  162 GGSLDDILKRVG-RIPEPVLGKIARAVLR----------------------GLSYLHEERKIIHRDIKPSNLLVNSKGEV  218 (364)
T ss_pred             CCCHHHHHhhcC-CCCHHHHHHHHHHHHH----------------------HHHHHhhccCeeeccCCHHHeeeccCCCE
Confidence            999999999765 7999999888886666                      9999995 899999999999999988753

>KOG0192|consensus

Probab=99.95  E-value=5.4e-27  Score=167.88  Aligned_cols=130  Identities=34%  Similarity=0.579  Sum_probs=114.8

Q ss_pred             CCccccCceeeEEEEEEec-c-eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC-ceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-E-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP-HLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~-~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~   78 (157)
                      .+.+|+|+||+||++.+++ . +|+|++...... ....+.|.+|+.++.+++|||||+++|++..+. .+.+||||+++
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~-~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~  124 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFD-DESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG  124 (362)
T ss_pred             hhhcccCCceeEEEEEeCCceeEEEEEecchhcC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence            4568999999999999988 3 899999875533 333789999999999999999999999999987 79999999999


Q ss_pred             CCHhHHHhh-hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc-ccccCCCCccccccccc
Q psy697           79 HTLYTNIHI-YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR-ILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~-~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++.. .+..+++..+..++.+||+                      +++|+|+++ |+|||+|+.|+|.....
T Consensus       125 GsL~~~l~~~~~~~l~~~~~l~~aldiAr----------------------Gm~YLH~~~~iIHrDLK~~NiLv~~~~  180 (362)
T KOG0192|consen  125 GSLSVLLHKKRKRKLPLKVRLRIALDIAR----------------------GMEYLHSEGPIIHRDLKSDNILVDLKG  180 (362)
T ss_pred             CcHHHHHhhcccCCCCHHHHHHHHHHHHH----------------------HHHHHhcCCCeeecccChhhEEEcCCC
Confidence            999999988 3458999999999999999                      888899999 99999999999987653

>KOG0598|consensus

Probab=99.95  E-value=2.6e-27  Score=164.56  Aligned_cols=131  Identities=23%  Similarity=0.249  Sum_probs=118.9

Q ss_pred             CCCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+.||+|+||+|++++.+++   +|+|++++..............|..++.+++||.||+++-.|.+...+|+|+||+.
T Consensus        29 ~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~  108 (357)
T KOG0598|consen   29 ILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLN  108 (357)
T ss_pred             eeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccC
Confidence            367899999999999998773   99999998876666678888999999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ||+|...+++.+ .+++..+..++.+|+.                      +|+++|+++|+|||+||+|+|....+
T Consensus       109 GGeLf~hL~~eg-~F~E~~arfYlaEi~l----------------------AL~~LH~~gIiyRDlKPENILLd~~G  162 (357)
T KOG0598|consen  109 GGELFYHLQREG-RFSEDRARFYLAEIVL----------------------ALGYLHSKGIIYRDLKPENILLDEQG  162 (357)
T ss_pred             CccHHHHHHhcC-CcchhHHHHHHHHHHH----------------------HHHHHHhCCeeeccCCHHHeeecCCC
Confidence            999999999866 8999999999996666                      89999999999999999999987654

>KOG0600|consensus

Probab=99.94  E-value=1.2e-26  Score=166.83  Aligned_cols=130  Identities=19%  Similarity=0.195  Sum_probs=114.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~   76 (157)
                      +++||+|+||.||+|+...   -||+|.+.... .++.......+|+.+|++++||||+++.+.....  ..+|+|+|||
T Consensus       122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~-~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYM  200 (560)
T KOG0600|consen  122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDN-EKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYM  200 (560)
T ss_pred             HHHhcCcchhheeEeeecccCcEEEEEEeeccc-CCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecc
Confidence            4679999999999999866   39999998765 4566777889999999999999999999999886  7899999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      ++ ||..++...+..|++.++..+|.|++.                      +|+++|.++++|||+|..|+|....+.
T Consensus       201 dh-DL~GLl~~p~vkft~~qIKc~mkQLl~----------------------Gl~~cH~~gvlHRDIK~SNiLidn~G~  256 (560)
T KOG0600|consen  201 DH-DLSGLLSSPGVKFTEPQIKCYMKQLLE----------------------GLEYCHSRGVLHRDIKGSNILIDNNGV  256 (560)
T ss_pred             cc-hhhhhhcCCCcccChHHHHHHHHHHHH----------------------HHHHHhhcCeeeccccccceEEcCCCC
Confidence            77 999999877778999999999998777                      888899999999999999999876553

>KOG0193|consensus

Probab=99.94  E-value=8e-27  Score=170.82  Aligned_cols=130  Identities=47%  Similarity=0.834  Sum_probs=119.7

Q ss_pred             CCCccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      +++.||+|.||+||+|.|.++||||.++... ..++..+.|.+|+.++++-+|.||+-+.|+++.++. .|++.||+|.+
T Consensus       396 l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~-pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsS  473 (678)
T KOG0193|consen  396 LGERIGSGSFGTVYRGRWHGDVAVKLLNVDD-PTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSS  473 (678)
T ss_pred             ccceeccccccceeecccccceEEEEEecCC-CCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCch
Confidence            4678999999999999999999999999887 566789999999999999999999999999999887 99999999999


Q ss_pred             HhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           81 LYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        81 L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+.+++-.+..|.......|+.||++                      +++|+|.++|||||+|..|+|.-++.
T Consensus       474 LY~hlHv~etkfdm~~~idIAqQiaq----------------------GM~YLHAK~IIHrDLKSnNIFl~~~~  525 (678)
T KOG0193|consen  474 LYTHLHVQETKFDMNTTIDIAQQIAQ----------------------GMDYLHAKNIIHRDLKSNNIFLHEDL  525 (678)
T ss_pred             hhhhccchhhhhhHHHHHHHHHHHHH----------------------hhhhhhhhhhhhhhccccceEEccCC
Confidence            99999987667888889899998888                      99999999999999999999987754

>KOG0610|consensus

Probab=99.94  E-value=1.6e-26  Score=162.82  Aligned_cols=131  Identities=22%  Similarity=0.226  Sum_probs=116.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|..|+||+++.++   .+|+|++++..+........+..|-.+|+.++||.++++|+.+.++...+++||||+|
T Consensus        82 lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpG  161 (459)
T KOG0610|consen   82 LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPG  161 (459)
T ss_pred             HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCC
Confidence            4689999999999999987   3999999987655555566778889999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|..+.+++. ..+++..+..++.                      |++.+|+|+|-.||++||+|++|+|.++.+
T Consensus       162 GdL~~LrqkQp~~~fse~~aRFYaA----------------------Evl~ALEYLHmlGivYRDLKPENILvredG  216 (459)
T KOG0610|consen  162 GDLHSLRQKQPGKRFSESAARFYAA----------------------EVLLALEYLHMLGIVYRDLKPENILVREDG  216 (459)
T ss_pred             ccHHHHHhhCCCCccchhhHHHHHH----------------------HHHHHHHHHHhhceeeccCCcceeEEecCC
Confidence            99999999864 3699999999988                      555599999999999999999999999875

>KOG0592|consensus

Probab=99.94  E-value=1.4e-26  Score=167.79  Aligned_cols=131  Identities=23%  Similarity=0.236  Sum_probs=118.1

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +++.||+|+|++|++|+.+.   .+|+|++.+..+..+....-+..|-.+|..+ .||.|++++-.|.+...+|+++||+
T Consensus        77 Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A  156 (604)
T KOG0592|consen   77 FGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYA  156 (604)
T ss_pred             hhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEec
Confidence            47899999999999999866   4999999988776666667777888899999 8999999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|+|.++|++.+ .|++...+.++.+|+.                      +++++|.+||||||+|++|+|..+..
T Consensus       157 ~nGdll~~i~K~G-sfde~caR~YAAeIld----------------------AleylH~~GIIHRDlKPENILLd~dm  211 (604)
T KOG0592|consen  157 PNGDLLDLIKKYG-SFDETCARFYAAEILD----------------------ALEYLHSNGIIHRDLKPENILLDKDG  211 (604)
T ss_pred             CCCcHHHHHHHhC-cchHHHHHHHHHHHHH----------------------HHHHHHhcCceeccCChhheeEcCCC
Confidence            9999999999987 8999999999996555                      99999999999999999999987754

>KOG0194|consensus

Probab=99.94  E-value=8.7e-26  Score=164.68  Aligned_cols=132  Identities=24%  Similarity=0.333  Sum_probs=116.0

Q ss_pred             CCCccccCceeeEEEEEEec------c-eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG------E-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~------~-~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      +.++||+|+||.||+|.++.      . ||+|...............+++|.+++++++||||+++||......+++++|
T Consensus       161 l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivm  240 (474)
T KOG0194|consen  161 LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVM  240 (474)
T ss_pred             ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEE
Confidence            35789999999999999744      2 7999887533355678889999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|+||+|.+++++.+..++..+...++.+.|.                      +|+|+|.++++|||+.+.|.|....
T Consensus       241 El~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~----------------------Gl~YLh~k~~IHRDIAARNcL~~~~  298 (474)
T KOG0194|consen  241 ELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAAR----------------------GLEYLHSKNCIHRDIAARNCLYSKK  298 (474)
T ss_pred             EecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHh----------------------HHHHHHHCCCcchhHhHHHheecCC
Confidence            999999999999997756999999999999999                      8888999999999999988887654


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       299 ~  299 (474)
T KOG0194|consen  299 G  299 (474)
T ss_pred             C
Confidence            3

>KOG0580|consensus

Probab=99.94  E-value=4.2e-27  Score=155.55  Aligned_cols=133  Identities=23%  Similarity=0.303  Sum_probs=115.3

Q ss_pred             CCCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +++.||+|.||.||+|+.++.   +|+|++.+.++......+++.+|+.+-+.++||||+++|++|.+...+|+++||..
T Consensus        26 igr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~  105 (281)
T KOG0580|consen   26 IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAP  105 (281)
T ss_pred             ccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecC
Confidence            478999999999999999774   99999988776556667889999999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           78 GHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        78 ~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      +|+++..++..+ ..+++.....++.|+|.                      +|.|+|.++++|||+|+.|.|..+.+.
T Consensus       106 ~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~----------------------Al~y~h~k~VIhRdiKpenlLlg~~~~  162 (281)
T KOG0580|consen  106 RGELYKDLQEGRMKRFDEQRAATYIKQLAN----------------------ALLYCHLKRVIHRDIKPENLLLGSAGE  162 (281)
T ss_pred             CchHHHHHHhcccccccccchhHHHHHHHH----------------------HHHHhccCCcccCCCCHHHhccCCCCC
Confidence            999999999543 26999999999999999                      455556667788888888888777654

>KOG0197|consensus

Probab=99.93  E-value=4.2e-26  Score=164.67  Aligned_cols=126  Identities=29%  Similarity=0.419  Sum_probs=112.5

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ++.||+|.||.|+.|.+.+  ++|+|.+....    ...+.|.+|+.+|++++|+|||++++++..++.++|||||++.|
T Consensus       211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~----m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS----MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHhcCCccceEEEEEEcCCCcccceEEeccc----cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence            4689999999999999987  59999998643    23466889999999999999999999999999999999999999


Q ss_pred             CHhHHHhh-hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHI-YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.++++. .+..+...+...++.|||+                      +++||.++++|||||.+.|+|+.+.
T Consensus       287 sLl~yLr~~~~~~l~~~~Ll~~a~qIae----------------------GM~YLes~~~IHRDLAARNiLV~~~  339 (468)
T KOG0197|consen  287 SLLDYLRTREGGLLNLPQLLDFAAQIAE----------------------GMAYLESKNYIHRDLAARNILVDED  339 (468)
T ss_pred             cHHHHhhhcCCCccchHHHHHHHHHHHH----------------------HHHHHHhCCccchhhhhhheeeccC
Confidence            99999997 4457999999999999999                      8888999999999999999998764

>KOG0591|consensus

Probab=99.93  E-value=3.2e-27  Score=159.68  Aligned_cols=134  Identities=22%  Similarity=0.336  Sum_probs=113.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeee-EEecCCc-eEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG-ACMKPPH-LAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~-~~~~~~~-~~lv~e~~   76 (157)
                      .+.||+|+||.||++....   .+|.|.+.-.. .+.+.++.+..|+.++++++|||||++++ .+..++. ++|+||+|
T Consensus        24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c  102 (375)
T KOG0591|consen   24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELC  102 (375)
T ss_pred             HHHHcCCcchheEEeeeccCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhh
Confidence            5789999999999998744   49999988544 77888999999999999999999999998 4444444 89999999


Q ss_pred             CCCCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|+|.++|+..+   ..+++..+++++.|++. ++..||+.                 +.+.-++|||+||.|+|....
T Consensus       103 ~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~-AL~~cH~~-----------------~~r~~VmHRDIKPaNIFl~~~  164 (375)
T KOG0591|consen  103 DAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCR-ALYHCHSK-----------------IPRGTVMHRDIKPANIFLTAN  164 (375)
T ss_pred             cccCHHHHHHHHHhccccCchHHHHHHHHHHHH-HHHHHhcc-----------------ccccceeeccCcchheEEcCC
Confidence            9999999998642   36999999999999999 99999883                 333568999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       165 g  165 (375)
T KOG0591|consen  165 G  165 (375)
T ss_pred             C
Confidence            4

>KOG1187|consensus

Probab=99.93  E-value=1.6e-25  Score=160.97  Aligned_cols=125  Identities=27%  Similarity=0.348  Sum_probs=109.4

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC-ceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP-HLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~g   79 (157)
                      ..||+|+||.||+|...+  .+|||.+.... .. . ...|.+|+.++.+++|||+++++|+|...+ ...+|+||+++|
T Consensus        81 ~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~-~~-~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nG  157 (361)
T KOG1187|consen   81 NLIGEGGFGTVYKGVLSDGTVVAVKRLSSNS-GQ-G-EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNG  157 (361)
T ss_pred             cceecCCCeEEEEEEECCCCEEEEEEecCCC-Cc-c-hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCC
Confidence            589999999999999977  59999887643 11 1 445999999999999999999999999988 499999999999


Q ss_pred             CHhHHHhhhcc-cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc---cccccCCCCccccccc
Q psy697           80 TLYTNIHIYKE-KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK---RILARSPSHPLNLSRS  152 (157)
Q Consensus        80 ~L~~~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~---~~~~rd~k~~~~~~~~  152 (157)
                      +|.+.+..... .++|..+.+|+.++|+                      +|+|+|..   .|+|||+|+.|+|..+
T Consensus       158 sL~d~L~~~~~~~L~W~~R~kIa~g~A~----------------------gL~yLH~~~~~~iiHrDiKssNILLD~  212 (361)
T KOG1187|consen  158 SLEDHLHGKKGEPLDWETRLKIALGAAR----------------------GLAYLHEGCPPPIIHRDIKSSNILLDE  212 (361)
T ss_pred             CHHHHhCCCCCCCCCHHHHHHHHHHHHH----------------------HHHHHccCCCCCEecCCCCHHHeeECC
Confidence            99999998665 8999999999999999                      77778874   3999999999999874

>KOG0616|consensus

Probab=99.93  E-value=6.5e-26  Score=154.03  Aligned_cols=130  Identities=22%  Similarity=0.205  Sum_probs=118.9

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||.|+||.|.+++.+..   +|+|++++..+..-...+...+|..+++.+.||+++++++.+...+.++++|||.+|
T Consensus        49 ~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~G  128 (355)
T KOG0616|consen   49 LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPG  128 (355)
T ss_pred             eeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCC
Confidence            56899999999999998763   999999987766677788899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |.|+.++++.+ .++++.++.++.||+.                      +|+|+|..+|++||+||+|++....+
T Consensus       129 GElFS~Lrk~~-rF~e~~arFYAAeivl----------------------AleylH~~~iiYRDLKPENiLlD~~G  181 (355)
T KOG0616|consen  129 GELFSYLRKSG-RFSEPHARFYAAEIVL----------------------ALEYLHSLDIIYRDLKPENLLLDQNG  181 (355)
T ss_pred             ccHHHHHHhcC-CCCchhHHHHHHHHHH----------------------HHHHHHhcCeeeccCChHHeeeccCC
Confidence            99999999877 8999999999997666                      89999999999999999999987654

>KOG0611|consensus

Probab=99.93  E-value=4.8e-26  Score=161.06  Aligned_cols=119  Identities=21%  Similarity=0.305  Sum_probs=105.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||+|.+|....   .||+|.+.+..+.+..+.-...+|+++|+.++||||+++|..|.+.+.+.|||||..+
T Consensus        58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~  137 (668)
T KOG0611|consen   58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASG  137 (668)
T ss_pred             HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCC
Confidence            4679999999999998744   5999999998877788888889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPD  122 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~  122 (157)
                      |+|++++..++ .+++.+...++.||.. ++.|||.+.+.||..
T Consensus       138 GeLYDYiSer~-~LsErEaRhfFRQIvS-AVhYCHknrVvHRDL  179 (668)
T KOG0611|consen  138 GELYDYISERG-SLSEREARHFFRQIVS-AVHYCHKNRVVHRDL  179 (668)
T ss_pred             ccHHHHHHHhc-cccHHHHHHHHHHHHH-HHHHHhhccceeccc
Confidence            99999999877 8999999999999999 777777664444433

>KOG0605|consensus

Probab=99.93  E-value=3.9e-25  Score=159.94  Aligned_cols=131  Identities=15%  Similarity=0.097  Sum_probs=117.5

Q ss_pred             CCCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +++.||+|+||.||+|+-+.+   +|+|++++...........+..|-.+|....+|++|+++.+|.+..++|++|||.+
T Consensus       145 ~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylP  224 (550)
T KOG0605|consen  145 LLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLP  224 (550)
T ss_pred             hheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecC
Confidence            367899999999999998774   99999998776566677888899999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ||++..+|...+ .+++..+..++.+++.                      +++.||..|++|||+||.|.|....+
T Consensus       225 GGD~mTLL~~~~-~L~e~~arfYiaE~vl----------------------AI~~iH~~gyIHRDIKPdNlLiD~~G  278 (550)
T KOG0605|consen  225 GGDMMTLLMRKD-TLTEDWARFYIAETVL----------------------AIESIHQLGYIHRDIKPDNLLIDAKG  278 (550)
T ss_pred             CccHHHHHHhcC-cCchHHHHHHHHHHHH----------------------HHHHHHHcCcccccCChhheeecCCC
Confidence            999999999866 8999999999886666                      88899999999999999999887654

>KOG0198|consensus

Probab=99.92  E-value=1.2e-24  Score=152.26  Aligned_cols=126  Identities=24%  Similarity=0.318  Sum_probs=111.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC--ceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP--HLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~   76 (157)
                      ++.||+|+||.||++...+   .+|+|.+....   ....+.+.+|+.++.+++|||||+++|......  .++++|||+
T Consensus        22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~   98 (313)
T KOG0198|consen   22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA   98 (313)
T ss_pred             hccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence            5789999999999999975   49999998752   222777899999999999999999999855554  699999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++|+|.+++...++.++++.+..+..|+++                      +|.++|+++++|||+|+.|+|...
T Consensus        99 ~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~----------------------GL~ylHs~g~vH~DiK~~NiLl~~  152 (313)
T KOG0198|consen   99 PGGSLSDLIKRYGGKLPEPLVRRYTRQILE----------------------GLAYLHSKGIVHCDIKPANILLDP  152 (313)
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeccCcccceEEEeC
Confidence            999999999987657999999999997777                      999999999999999999999876

>KOG0583|consensus

Probab=99.92  E-value=1.3e-24  Score=156.64  Aligned_cols=130  Identities=23%  Similarity=0.361  Sum_probs=110.8

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCC-CH-HHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEe
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD-DE-KTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~-~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      +++.||+|+||+|+.|.+..   .+|+|+++..... .. ...+.+.+|+.+++.+. ||||++++.++.+...++++||
T Consensus        21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmE  100 (370)
T KOG0583|consen   21 LGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVME  100 (370)
T ss_pred             eeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEE
Confidence            36789999999999998854   5999988764321 11 23455668999999998 9999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||.+|+|.+++.. .+.+.+..+..++.|++.                      +++++|+++|+|||+|++|++....
T Consensus       101 y~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlis----------------------av~y~H~~gi~HRDLK~ENilld~~  156 (370)
T KOG0583|consen  101 YCSGGDLFDYIVN-KGRLKEDEARKYFRQLIS----------------------AVAYCHSRGIVHRDLKPENILLDGN  156 (370)
T ss_pred             ecCCccHHHHHHH-cCCCChHHHHHHHHHHHH----------------------HHHHHHhCCEeeCCCCHHHEEecCC
Confidence            9999999999998 448999999999998888                      6777788899999999999998876

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.92  E-value=2.2e-24  Score=156.86  Aligned_cols=130  Identities=15%  Similarity=0.083  Sum_probs=111.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|....   .+|+|.+.............+..|+.++..++|||++++++++...+.++++|||+++
T Consensus         6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~g   85 (381)
T cd05626           6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG   85 (381)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence            5789999999999998855   4999999765433445566788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|.++|+|||+|+.|++....+
T Consensus        86 g~L~~~l~~~~-~~~e~~~~~~~~qi~~----------------------aL~~LH~~givHrDlKp~Nili~~~~  138 (381)
T cd05626          86 GDMMSLLIRME-VFPEVLARFYIAELTL----------------------AIESVHKMGFIHRDIKPDNILIDLDG  138 (381)
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeecCCcHHHEEECCCC
Confidence            99999998755 6888888888887777                      88888999999999999999986543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0661|consensus

Probab=99.91  E-value=1.4e-25  Score=160.48  Aligned_cols=128  Identities=21%  Similarity=0.233  Sum_probs=109.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCC-ceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPP-HLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~lv~e~~   76 (157)
                      .++||.|+||.||+|....   .||+|.++.... .. ....-.+|+..+++++ ||||+++...+...+ .+|+|||||
T Consensus        15 i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~-ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~M   92 (538)
T KOG0661|consen   15 IRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SW-EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFM   92 (538)
T ss_pred             HHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cH-HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhh
Confidence            4689999999999999866   399999987542 22 2223357999999998 999999999999887 899999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      + .+|+++++.++..|++..+..|+.||++                      +|+++|.+|+.|||+|++|+|.+..+
T Consensus        93 d-~NLYqLmK~R~r~fse~~irnim~Qilq----------------------GL~hiHk~GfFHRDlKPENiLi~~~~  147 (538)
T KOG0661|consen   93 D-CNLYQLMKDRNRLFSESDIRNIMYQILQ----------------------GLAHIHKHGFFHRDLKPENILISGND  147 (538)
T ss_pred             h-hhHHHHHhhcCCcCCHHHHHHHHHHHHH----------------------HHHHHHhcCcccccCChhheEecccc
Confidence            5 5999999998768999999999997777                      99999999999999999999988544

>KOG0597|consensus

Probab=99.91  E-value=9e-25  Score=159.65  Aligned_cols=128  Identities=27%  Similarity=0.389  Sum_probs=114.4

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.+|+|+||.||+|+.+.+   ||+|.+++.. ...+..+.+.+|+++++.++||||+.++++|++...+|+|+|||.|
T Consensus         7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g-r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g   85 (808)
T KOG0597|consen    7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG-RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG   85 (808)
T ss_pred             HHHhcCCccceeeecccccceeEEEEEEehhcC-CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh
Confidence            46799999999999998773   9999998876 5566788899999999999999999999999999999999999977


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                       +|..++...+ .+++.++..++.+++.                      +|.|+|+.+|+|||.|+.|+|.....
T Consensus        86 -~L~~il~~d~-~lpEe~v~~~a~~LVs----------------------aL~yLhs~rilhrd~kPqniLl~~~~  137 (808)
T KOG0597|consen   86 -DLFTILEQDG-KLPEEQVRAIAYDLVS----------------------ALYYLHSNRILHRDMKPQNILLEKGG  137 (808)
T ss_pred             -hHHHHHHhcc-CCCHHHHHHHHHHHHH----------------------HHHHHHhcCcccccCCcceeeecCCC
Confidence             9999999866 8999999999996666                      88889999999999999999876543

>KOG0589|consensus

Probab=99.91  E-value=1.7e-24  Score=155.65  Aligned_cols=132  Identities=20%  Similarity=0.229  Sum_probs=117.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc-eEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH-LAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~lv~e~~~   77 (157)
                      ++.+|+|+||.++++.++.   .+++|.+..+. .....++...+|+.+++++.|||||.+.+.+...+. .+|+|+||+
T Consensus         9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~-~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~e   87 (426)
T KOG0589|consen    9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEK-LTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCE   87 (426)
T ss_pred             hhhcCccccchhhhhhhccCCceEEEEEEeccc-cCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecC
Confidence            5789999999999998866   49999999877 455567788999999999999999999999999888 999999999


Q ss_pred             CCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccCC
Q psy697           78 GHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESV  156 (157)
Q Consensus        78 ~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~~  156 (157)
                      ||++.+.|...+ ..+++..+..++.|++.                      +++++|+++|+|||+|..|+|....+++
T Consensus        88 Gg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~----------------------av~ylH~~~iLHRDlK~~Nifltk~~~V  145 (426)
T KOG0589|consen   88 GGDLAQLIKEQKGVLFPEERILKWFVQILL----------------------AVNYLHENRVLHRDLKCANIFLTKDKKV  145 (426)
T ss_pred             CCCHHHHHHHHhhccccHHHHHHHHHHHHH----------------------HHHHHHhhhhhcccchhhhhhccccCce
Confidence            999999999866 56999999999998888                      7888999999999999999998876653

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.3e-24  Score=155.71  Aligned_cols=130  Identities=18%  Similarity=0.112  Sum_probs=110.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+...........+.+.+|+.++..++||||+++++++.....++++|||+++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~g   85 (377)
T cd05629           6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPG   85 (377)
T ss_pred             eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCC
Confidence            5789999999999998755   4999998754322334456778899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        86 g~L~~~l~~~~-~~~~~~~~~~~~ql~~----------------------aL~~LH~~givHrDlkp~NIll~~~~  138 (377)
T cd05629          86 GDLMTMLIKYD-TFSEDVTRFYMAECVL----------------------AIEAVHKLGFIHRDIKPDNILIDRGG  138 (377)
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCHHHEEECCCC
Confidence            99999998654 7889888888887777                      88889999999999999999986543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0593|consensus

Probab=99.91  E-value=1.5e-24  Score=148.16  Aligned_cols=129  Identities=19%  Similarity=0.237  Sum_probs=108.1

Q ss_pred             CccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .++|+|+||.|++|+.+.+   ||+|.+.... .++...+-.++|+.++++++|+|+|.++..|.....+++|+|||+..
T Consensus         8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhT   86 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHT   86 (396)
T ss_pred             hccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchH
Confidence            4689999999999999884   9999997765 56777888899999999999999999999999999999999999884


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      -| +-+......++...+..++.|+++ ++.|                     +|.++++|||+|++|+|....+.
T Consensus        87 vL-~eLe~~p~G~~~~~vk~~l~Q~l~-ai~~---------------------cHk~n~IHRDIKPENILit~~gv  139 (396)
T KOG0593|consen   87 VL-HELERYPNGVPSELVKKYLYQLLK-AIHF---------------------CHKNNCIHRDIKPENILITQNGV  139 (396)
T ss_pred             HH-HHHHhccCCCCHHHHHHHHHHHHH-Hhhh---------------------hhhcCeecccCChhheEEecCCc
Confidence            44 445554447899999999998888 5555                     55557899999999998876543

>KOG0659|consensus

Probab=99.91  E-value=3e-24  Score=144.10  Aligned_cols=130  Identities=17%  Similarity=0.180  Sum_probs=112.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.+|+|+||.||+|.+..   .||+|.+..... .........+|+..++.++|+||+.++++|.....+.+|+||++.
T Consensus         7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~-kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t   85 (318)
T KOG0659|consen    7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA-KDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT   85 (318)
T ss_pred             hhhhcCcceEEEEEEEecCCCcEEEEEEeecccc-ccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc
Confidence            4689999999999999865   499999987542 223345678999999999999999999999999999999999965


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                       +|...|+.....++..++..++.++.+                      +++++|++.|+|||+|+.|+|..+.+-
T Consensus        86 -dLe~vIkd~~i~l~pa~iK~y~~m~Lk----------------------Gl~y~H~~~IlHRDlKPnNLLis~~g~  139 (318)
T KOG0659|consen   86 -DLEVVIKDKNIILSPADIKSYMLMTLK----------------------GLAYCHSKWILHRDLKPNNLLISSDGQ  139 (318)
T ss_pred             -cHHHHhcccccccCHHHHHHHHHHHHH----------------------HHHHHHhhhhhcccCCccceEEcCCCc
Confidence             999999987778999999999997666                      888899999999999999999887653

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.2e-24  Score=155.10  Aligned_cols=130  Identities=14%  Similarity=0.083  Sum_probs=111.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.............+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~   85 (364)
T cd05599           6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPG   85 (364)
T ss_pred             EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCC
Confidence            5789999999999999854   4999999764322334456678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        86 g~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------aL~~lH~~~ivH~Dlkp~NIl~~~~~  138 (364)
T cd05599          86 GDMMTLLMKKD-TFTEEETRFYIAETIL----------------------AIDSIHKLGYIHRDIKPDNLLLDAKG  138 (364)
T ss_pred             cHHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeccCCHHHeEECCCC
Confidence            99999998755 7899999999997777                      78888889999999999999986543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.91  E-value=4.4e-24  Score=154.41  Aligned_cols=130  Identities=13%  Similarity=0.081  Sum_probs=111.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|++.............+..|..++..++|||++++++.+.....++++|||+++
T Consensus         6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~g   85 (363)
T cd05628           6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPG   85 (363)
T ss_pred             eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCC
Confidence            5789999999999998854   4999999764322334456778899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus        86 g~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------aL~~lH~~givHrDlKp~NILi~~~~  138 (363)
T cd05628          86 GDMMTLLMKKD-TLTEEETQFYIAETVL----------------------AIDSIHQLGFIHRDIKPDNLLLDSKG  138 (363)
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEecCCCHHHeEECCCC
Confidence            99999998755 7899999999887777                      88888999999999999999986543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0032|consensus

Probab=99.91  E-value=1.2e-23  Score=151.79  Aligned_cols=129  Identities=25%  Similarity=0.372  Sum_probs=114.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      ++.||+|.||.||.+..+.   .+|+|.+.+.......+...+.+|+.+|..++ |||++.+++.+.+...++++||+|.
T Consensus        40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~  119 (382)
T KOG0032|consen   40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCE  119 (382)
T ss_pred             hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecC
Confidence            5789999999999999876   49999998876544445678999999999997 9999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ||+|.+.+...  .+++..+..++.|++.                      +++++|..+++|||+|++|+|..+.+
T Consensus       120 GGeLfd~i~~~--~~sE~da~~~~~~il~----------------------av~~lH~~gvvHrDlKpEN~L~~~~~  172 (382)
T KOG0032|consen  120 GGELFDRIVKK--HYSERDAAGIIRQILE----------------------AVKYLHSLGVVHRDLKPENLLLASKD  172 (382)
T ss_pred             CchHHHHHHHc--cCCHHHHHHHHHHHHH----------------------HHHHHHhCCceeccCCHHHeeecccc
Confidence            99999999875  3899999999998888                      66667778999999999999988764

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.91  E-value=7.7e-24  Score=150.96  Aligned_cols=129  Identities=19%  Similarity=0.206  Sum_probs=110.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||++....   .+|+|++.............+.+|+.++..++|||++++++.+...+.++++|||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999998754   49999997643233344566788999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~L~~lH~~~ivHrDlkp~NIll~~~~  132 (323)
T cd05571          81 ELFFHLSRER-VFSEDRARFYGAEIVS----------------------ALGYLHSCDVVYRDLKLENLMLDKDG  132 (323)
T ss_pred             cHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEeCCCCHHHEEECCCC
Confidence            9999998755 7899999888887777                      88888999999999999999986543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.91  E-value=5.6e-24  Score=154.78  Aligned_cols=130  Identities=15%  Similarity=0.077  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.............+.+|+.+++.++||||+++++.+...+.++++|||+++
T Consensus         6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~g   85 (382)
T cd05625           6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG   85 (382)
T ss_pred             EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCC
Confidence            5789999999999999855   4999998764322334566788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|..+.+
T Consensus        86 g~L~~~l~~~~-~~~e~~~~~~~~qi~~----------------------al~~lH~~~ivHrDlKp~NILl~~~g  138 (382)
T cd05625          86 GDMMSLLIRMG-IFPEDLARFYIAELTC----------------------AVESVHKMGFIHRDIKPDNILIDRDG  138 (382)
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEECCCC
Confidence            99999998654 6888888888887777                      78888989999999999999986543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.91  E-value=1.2e-23  Score=150.05  Aligned_cols=129  Identities=21%  Similarity=0.228  Sum_probs=109.9

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||++....   .+|+|.+.............+.+|+.++..++|||++++++++...+.++++|||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            479999999999998754   49999997643233445566778999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|..++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivH~Dlkp~NIll~~~~  132 (323)
T cd05595          81 ELFFHLSRER-VFTEERARFYGAEIVS----------------------ALEYLHSRDVVYRDIKLENLMLDKDG  132 (323)
T ss_pred             cHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEecCCCHHHEEEcCCC
Confidence            9999887655 7899999999998777                      77888888999999999999886543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.91  E-value=6.6e-24  Score=154.09  Aligned_cols=130  Identities=16%  Similarity=0.071  Sum_probs=110.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.............+.+|+.++..++|||++++++.+...+.++++|||+++
T Consensus         6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~   85 (376)
T cd05598           6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG   85 (376)
T ss_pred             EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCC
Confidence            5789999999999999865   4999998653222223456678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+.+
T Consensus        86 g~L~~~i~~~~-~~~~~~~~~~~~qi~~----------------------al~~lH~~~ivHrDlkp~Nill~~~~  138 (376)
T cd05598          86 GDMMSLLIRLG-IFEEDLARFYIAELTC----------------------AIESVHKMGFIHRDIKPDNILIDRDG  138 (376)
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeCCCCHHHEEECCCC
Confidence            99999998755 6888888888887777                      88888999999999999999987544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.91  E-value=1.8e-23  Score=149.44  Aligned_cols=128  Identities=20%  Similarity=0.234  Sum_probs=110.0

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||++....   .+|+|++.............+.+|+.++..++|||++++++.+...+.++++|||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            468999999999998754   49999997654333445667888999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|...+...+ .+++.++..++.|++.                      +|+++|+++++|||+|+.|++..+.
T Consensus        81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDikp~NIll~~~  131 (328)
T cd05593          81 ELFFHLSRER-VFSEDRTRFYGAEIVS----------------------ALDYLHSGKIVYRDLKLENLMLDKD  131 (328)
T ss_pred             CHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEecccCHHHeEECCC
Confidence            9999887654 6899999999998777                      7778888899999999999988654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.91  E-value=2.9e-23  Score=144.21  Aligned_cols=128  Identities=18%  Similarity=0.241  Sum_probs=109.8

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..      .+|+|.+...  .+......+.+|+..+..++|||++++++++...+..+++|||
T Consensus        10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   87 (266)
T cd05064          10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG--CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEY   87 (266)
T ss_pred             eeeecccCCCeEEEEEEecCCCceeeEEEEecCCC--CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEe
Confidence            5789999999999997642      4899998764  2344456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++|+|.+++......+++..+..++.|++.                      +++++|+++++|||+|+.|++....
T Consensus        88 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~----------------------al~~lH~~~iiH~dikp~nili~~~  143 (266)
T cd05064          88 MSNGALDSFLRKHEGQLVAGQLMGMLPGLAS----------------------GMKYLSEMGYVHKGLAAHKVLVNSD  143 (266)
T ss_pred             CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeeccccHhhEEEcCC
Confidence            9999999999875557899999999998777                      7778888899999999999887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.91  E-value=1.1e-23  Score=151.14  Aligned_cols=129  Identities=20%  Similarity=0.188  Sum_probs=110.1

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.+.+    .+|+|.+...........+.+.+|+.++..++||||+++++++...+.++++|||++
T Consensus        35 ~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~  114 (340)
T PTZ00426         35 IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVI  114 (340)
T ss_pred             EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCC
Confidence            4679999999999998754    489999875432333455678889999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus       115 ~g~L~~~i~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDLkp~NILl~~~  167 (340)
T PTZ00426        115 GGEFFTFLRRNK-RFPNDVGCFYAAQIVL----------------------IFEYLQSLNIVYRDLKPENLLLDKD  167 (340)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEccCCCHHHEEECCC
Confidence            999999998755 7899999888887777                      7788888999999999999998654

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2e-23  Score=148.11  Aligned_cols=127  Identities=20%  Similarity=0.203  Sum_probs=108.5

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      ||+|+||.||++....   .+|+|.+.............+..|+.++..++||||+++++++...+..+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            7999999999999865   4999998754323344556778899999999999999999999999999999999999999


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        81 ~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~HrDlkp~Nili~~~~  130 (312)
T cd05585          81 FHHLQREG-RFDLSRARFYTAELLC----------------------ALENLHKFNVIYRDLKPENILLDYQG  130 (312)
T ss_pred             HHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEeCCCCHHHeEECCCC
Confidence            99998754 7899999888887777                      78888889999999999999886543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.90  E-value=9.6e-24  Score=150.84  Aligned_cols=130  Identities=19%  Similarity=0.220  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+...........+.+.+|+.++..++||||+++++.+...+..+++|||+++
T Consensus        23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  102 (329)
T PTZ00263         23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVG  102 (329)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCC
Confidence            4679999999999999865   4999999764322334456788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus       103 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivH~dlkp~NIll~~~~  155 (329)
T PTZ00263        103 GELFTHLRKAG-RFPNDVAKFYHAELVL----------------------AFEYLHSKDIIYRDLKPENLLLDNKG  155 (329)
T ss_pred             ChHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCCHHHEEECCCC
Confidence            99999998755 6888888888887776                      78888899999999999999987654

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.90  E-value=2.9e-23  Score=148.34  Aligned_cols=129  Identities=19%  Similarity=0.227  Sum_probs=110.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||++....   .+|+|+++............+..|..++..+ +||||+++++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            468999999999999865   4999999865433444556778899999888 799999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        81 g~L~~~~~~~~-~l~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~dlkp~Nili~~~~  133 (329)
T cd05588          81 GDLMFHMQRQR-KLPEEHARFYSAEISL----------------------ALNFLHERGIIYRDLKLDNVLLDAEG  133 (329)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEecCCCHHHeEECCCC
Confidence            99999887654 7999999999998777                      78888888999999999999886543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=9e-24  Score=148.57  Aligned_cols=130  Identities=18%  Similarity=0.137  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+...........+.+.+|+.++..++||||+++++.+...+.++++|||+++
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   85 (291)
T cd05612           6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPG   85 (291)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCC
Confidence            5789999999999999864   4999998754322334456788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        86 ~~L~~~~~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlkp~NIli~~~~  138 (291)
T cd05612          86 GELFSYLRNSG-RFSNSTGLFYASEIVC----------------------ALEYLHSKEIVYRDLKPENILLDKEG  138 (291)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCCHHHeEECCCC
Confidence            99999998755 7899988888887777                      88888999999999999999987643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0586|consensus

Probab=99.90  E-value=2.6e-23  Score=152.52  Aligned_cols=127  Identities=21%  Similarity=0.234  Sum_probs=108.9

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+.||+|.|+.|.++.+.-   .||+|+++++. .+....+.+.+|++++..++|||||+++++..++..+|+||||+.
T Consensus        60 i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~-ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~  138 (596)
T KOG0586|consen   60 IIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQ-LNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYAS  138 (596)
T ss_pred             eeeeeccceeEEEEeeEecCCCceEEEEEehhcc-cChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEecc
Confidence            35789999999999999855   59999999998 556667779999999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +|.+++++...+ ...+..+..++.|+..                      +++|+|.++|+|||||+.|++..
T Consensus       139 ~ge~~~yl~~~g-r~~e~~ar~~F~q~vs----------------------aveYcH~k~ivHrdLk~eNilL~  189 (596)
T KOG0586|consen  139 GGELFDYLVKHG-RMKEKEARAKFRQIVS----------------------AVEYCHSKNIVHRDLKAENILLD  189 (596)
T ss_pred             CchhHHHHHhcc-cchhhhhhhhhHHHHH----------------------HHHHHhhcceeccccchhhcccc
Confidence            999999999876 5655666666665554                      77778888999999999988754

>KOG0663|consensus

Probab=99.90  E-value=8.9e-24  Score=145.88  Aligned_cols=131  Identities=23%  Similarity=0.254  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~   76 (157)
                      ++.|++|+||.||+|.++.+   ||+|.++... ......-...+|+.++.+++|||||.+.......  +.+|+|||||
T Consensus        81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~  159 (419)
T KOG0663|consen   81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYV  159 (419)
T ss_pred             HhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHH
Confidence            46799999999999999773   9999998654 2223333457899999999999999999888764  6799999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccCC
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESV  156 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~~  156 (157)
                      ++ +|..++...+.++...++..++.|+++                      +++++|.+.|+|||+|.+|+|....+++
T Consensus       160 Eh-DLksl~d~m~q~F~~~evK~L~~QlL~----------------------glk~lH~~wilHRDLK~SNLLm~~~G~l  216 (419)
T KOG0663|consen  160 EH-DLKSLMETMKQPFLPGEVKTLMLQLLR----------------------GLKHLHDNWILHRDLKTSNLLLSHKGIL  216 (419)
T ss_pred             Hh-hHHHHHHhccCCCchHHHHHHHHHHHH----------------------HHHHHhhceeEecccchhheeeccCCcE
Confidence            87 999999887768999999999997666                      9999999999999999999998877653

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.9e-23  Score=149.48  Aligned_cols=130  Identities=15%  Similarity=0.130  Sum_probs=111.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.............+.+|+.++..++||||+++++.+...+..+++|||+++
T Consensus         6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g   85 (333)
T cd05600           6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPG   85 (333)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCC
Confidence            5689999999999999864   5999999764322334456788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|.++|+++++|||+|+.|++..+..
T Consensus        86 ~~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~dlkp~Nil~~~~~  138 (333)
T cd05600          86 GDFRTLLNNLG-VLSEDHARFYMAEMFE----------------------AVDALHELGYIHRDLKPENFLIDASG  138 (333)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCCHHHEEECCCC
Confidence            99999998655 7899999998887777                      77778888999999999999886543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.90  E-value=5.6e-23  Score=146.61  Aligned_cols=129  Identities=19%  Similarity=0.230  Sum_probs=109.3

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||++....   .+|+|.+.............+..|+.++..++||||+++++++...+.++++|||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            479999999999998754   49999998654333344566778999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|..++...+ .+++..+..++.|++.                      +|+++|+ ++++|||+|+.|++..+..
T Consensus        81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------aL~~lH~~~~ivHrDikp~NIll~~~~  133 (325)
T cd05594          81 ELFFHLSRER-VFSEDRARFYGAEIVS----------------------ALDYLHSEKNVVYRDLKLENLMLDKDG  133 (325)
T ss_pred             cHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhcCCEEecCCCCCeEEECCCC
Confidence            9999887655 7899999999998877                      7777886 7899999999999886543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.90  E-value=3e-23  Score=149.92  Aligned_cols=130  Identities=12%  Similarity=0.082  Sum_probs=111.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.............+..|..++..++|||++++++.+...+.++++|||+++
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~g   85 (360)
T cd05627           6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPG   85 (360)
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence            4689999999999999865   4999999754322334456778899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        86 g~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------~L~~lH~~givHrDLkp~NIli~~~~  138 (360)
T cd05627          86 GDMMTLLMKKD-TLSEEATQFYIAETVL----------------------AIDAIHQLGFIHRDIKPDNLLLDAKG  138 (360)
T ss_pred             ccHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEccCCCHHHEEECCCC
Confidence            99999998755 7899999998887777                      78888999999999999999986543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.90  E-value=8.4e-23  Score=142.55  Aligned_cols=124  Identities=21%  Similarity=0.270  Sum_probs=105.0

Q ss_pred             ccccCceeeEEEEEEec---------------------------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCce
Q psy697            4 RIGKGHFGTVYNGNWHG---------------------------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL   56 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~---------------------------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni   56 (157)
                      .||+|+||.||+|....                           .+++|.+...   .......+.+|..+++.++|||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence            68999999999997421                           2788888652   23445678888999999999999


Q ss_pred             eeeeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697           57 VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus        57 v~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +++++++......+++|||+++|+|..++...++.+++..+..++.|++.                      +++++|++
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~  136 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLAS----------------------ALSYLEDK  136 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHcC
Confidence            99999999999999999999999999999765557899998888888777                      88889999


Q ss_pred             cccccCCCCccccccc
Q psy697          137 RILARSPSHPLNLSRS  152 (157)
Q Consensus       137 ~~~~rd~k~~~~~~~~  152 (157)
                      +++|||+|+.|++...
T Consensus       137 ~iiH~dlkp~Nill~~  152 (274)
T cd05076         137 NLVHGNVCAKNILLAR  152 (274)
T ss_pred             CccCCCCCcccEEEec
Confidence            9999999999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=3.1e-23  Score=148.31  Aligned_cols=131  Identities=15%  Similarity=0.118  Sum_probs=110.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.+.........+.+.+|..++..++|+|++++++++...+.++++|||+++
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g   85 (331)
T cd05597           6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVG   85 (331)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCC
Confidence            5789999999999999865   4999999753222334456678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+..+++..+..++.|++.                      +++++|+++++|||+|+.|++.....
T Consensus        86 ~~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~dlkp~Nill~~~~  139 (331)
T cd05597          86 GDLLTLLSKFEDRLPEDMARFYLAEMVL----------------------AIDSVHQLGYVHRDIKPDNVLLDKNG  139 (331)
T ss_pred             CcHHHHHHHhcCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEECCCCHHHEEECCCC
Confidence            9999999865446899999888887777                      78888889999999999999886543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0582|consensus

Probab=99.90  E-value=5.8e-23  Score=146.26  Aligned_cols=131  Identities=22%  Similarity=0.292  Sum_probs=112.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||.|..+.||+|....   -||+|+++.+.  ...+...+.+|+..++.++||||++++.+|.....+|+||.|+++
T Consensus        31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEk--c~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~  108 (516)
T KOG0582|consen   31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEK--CNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAG  108 (516)
T ss_pred             EEEEeccceeEeeeeeecccCCEEEEEEeehhh--hhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcC
Confidence            4679999999999999855   39999998874  334478899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccCC
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESV  156 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~~  156 (157)
                      |++.++++..- ..+++..+..+.+                      +++++|.|+|.+|-||||+|+.|+|..+.+.+
T Consensus       109 GS~ldIik~~~~~Gl~E~~Ia~iLr----------------------e~LkaL~YLH~~G~IHRdvKAgnILi~~dG~V  165 (516)
T KOG0582|consen  109 GSLLDIIKTYYPDGLEEASIATILR----------------------EVLKALDYLHQNGHIHRDVKAGNILIDSDGTV  165 (516)
T ss_pred             CcHHHHHHHHccccccHHHHHHHHH----------------------HHHHHHHHHHhcCceecccccccEEEcCCCcE
Confidence            99999998742 2477777666666                      55559999999999999999999999887653

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.90  E-value=2e-22  Score=142.46  Aligned_cols=128  Identities=20%  Similarity=0.328  Sum_probs=106.4

Q ss_pred             CCccccCceeeEEEEEEec-------------------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeE
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------------------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA   62 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------------------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~   62 (157)
                      .+.||+|+||.||+|.+..                   .+|+|.+...  ........+.+|+.++.+++|||+++++++
T Consensus        10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~   87 (304)
T cd05096          10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD--ANKNARNDFLKEVKILSRLKDPNIIRLLGV   87 (304)
T ss_pred             eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC--CCHHHHHHHHHHHHHHhhcCCCCeeEEEEE
Confidence            5789999999999997521                   3899998764  234456778999999999999999999999


Q ss_pred             EecCCceEEEEecCCCCCHhHHHhhhc------------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHH
Q psy697           63 CMKPPHLAIVTSKCNGHTLYTNIHIYK------------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFI  124 (157)
Q Consensus        63 ~~~~~~~~lv~e~~~~g~L~~~i~~~~------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~  124 (157)
                      +...+..+++|||+++|+|.+++....                  ..+++..+..++.|++.                  
T Consensus        88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~------------------  149 (304)
T cd05096          88 CVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIAS------------------  149 (304)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHH------------------
Confidence            999999999999999999999986531                  13566778888887777                  


Q ss_pred             HHHHHHhccccccccccCCCCcccccccc
Q psy697          125 TLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       125 ~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                          +|.++|+.+++|||+|+.|++....
T Consensus       150 ----al~~lH~~~ivH~dlkp~Nill~~~  174 (304)
T cd05096         150 ----GMKYLSSLNFVHRDLATRNCLVGEN  174 (304)
T ss_pred             ----HHHHHHHCCccccCcchhheEEcCC
Confidence                7788888899999999999987654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.90  E-value=5.2e-23  Score=149.18  Aligned_cols=129  Identities=16%  Similarity=0.094  Sum_probs=108.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.+...........+.+|+.+++.++|||++++++++.....++++|||+++
T Consensus        48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~g  127 (370)
T cd05621          48 VKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPG  127 (370)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCC
Confidence            4679999999999999865   4999998753323334455678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...  .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+..
T Consensus       128 g~L~~~l~~~--~~~~~~~~~~~~qil~----------------------aL~~LH~~~IvHrDLKp~NILl~~~~  179 (370)
T cd05621         128 GDLVNLMSNY--DVPEKWAKFYTAEVVL----------------------ALDAIHSMGLIHRDVKPDNMLLDKHG  179 (370)
T ss_pred             CcHHHHHHhc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEecCCCHHHEEECCCC
Confidence            9999999754  5788888888887776                      88888999999999999999986543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0594|consensus

Probab=99.89  E-value=5.8e-23  Score=142.46  Aligned_cols=129  Identities=19%  Similarity=0.266  Sum_probs=107.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCc-eeeeeeEEecCC------ceEEE
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN-LVLFMGACMKPP------HLAIV   72 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~------~~~lv   72 (157)
                      +++|+|+||.||+|+.+.   .||+|.+.... ..+.......+|+.++..++|+| |+.+++.+.+.+      .++++
T Consensus        17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~-~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lv   95 (323)
T KOG0594|consen   17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEF-EEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLV   95 (323)
T ss_pred             HHhCCCCceEEEEEEEecCCCEEEEEEEeccc-cccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEE
Confidence            569999999999999866   39999998764 22234456789999999999999 999999998877      89999


Q ss_pred             EecCCCCCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           73 TSKCNGHTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      +||++. +|..++....   ..++...+..++.|++.                      +++++|+++|+|||+|++|++
T Consensus        96 fe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~----------------------gl~~~H~~~IlHRDLKPQNlL  152 (323)
T KOG0594|consen   96 FEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLR----------------------GLAFLHSHGILHRDLKPQNLL  152 (323)
T ss_pred             EEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecccCCcceEE
Confidence            999954 9999998754   24677778888887777                      888888889999999999999


Q ss_pred             cccccC
Q psy697          150 SRSAES  155 (157)
Q Consensus       150 ~~~~~~  155 (157)
                      ..+.+.
T Consensus       153 i~~~G~  158 (323)
T KOG0594|consen  153 ISSSGV  158 (323)
T ss_pred             ECCCCc
Confidence            887553

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.89  E-value=6.1e-23  Score=146.80  Aligned_cols=131  Identities=15%  Similarity=0.103  Sum_probs=110.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.............+..|..++..++|+|++++++++...+..+++|||+++
T Consensus         6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~g   85 (331)
T cd05624           6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVG   85 (331)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence            5689999999999998865   4999998753222333455677888999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        86 g~L~~~l~~~~~~l~~~~~~~~~~qi~~----------------------~L~~lH~~~iiHrDlkp~Nill~~~~  139 (331)
T cd05624          86 GDLLTLLSKFEDRLPEDMARFYIAEMVL----------------------AIHSIHQLHYVHRDIKPDNVLLDMNG  139 (331)
T ss_pred             CcHHHHHHHhcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeccCchHHEEEcCCC
Confidence            9999999875447889888888887777                      88889999999999999999886543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.89  E-value=1.1e-22  Score=145.31  Aligned_cols=129  Identities=21%  Similarity=0.243  Sum_probs=109.5

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||++....   .+|+|.+......+......+..|..++..+ +|||++++++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            469999999999999865   4999999865434445566677888888777 899999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|..++...+ .+++..+..++.|++.                      +++++|+++++|||+|+.|++..+.+
T Consensus        81 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~----------------------~l~~lH~~~ivH~Dikp~Nili~~~~  133 (329)
T cd05618          81 GDLMFHMQRQR-KLPEEHARFYSAEISL----------------------ALNYLHERGIIYRDLKLDNVLLDSEG  133 (329)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeCCCCHHHEEECCCC
Confidence            99999887654 7899999999988777                      77788888999999999999886643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG4250|consensus

Probab=99.89  E-value=1.1e-23  Score=156.66  Aligned_cols=129  Identities=22%  Similarity=0.323  Sum_probs=108.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      .+.||+|+||.||+++.+.   .+|+|.++...  ....++.-..|++++++++|+|||++++.-.+.      ....++
T Consensus        18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             hhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence            3679999999999999766   49999998764  334566678899999999999999999876543      457899


Q ss_pred             EecCCCCCHhHHHhhhcc--cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           73 TSKCNGHTLYTNIHIYKE--KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ||||++|||...+++..+  .+++.+.+.+..+++.                      ++.++|+++|+|||+||.|++.
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~----------------------al~~LrEn~IvHRDlKP~NIvl  153 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVS----------------------ALRHLRENGIVHRDLKPGNIVL  153 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHH----------------------HHHHHHHcCceeccCCCCcEEE
Confidence            999999999999987542  5999999888886666                      8889999999999999999987


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      -.++
T Consensus       154 ~~Ge  157 (732)
T KOG4250|consen  154 QIGE  157 (732)
T ss_pred             eecC
Confidence            6655

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.89  E-value=1e-22  Score=145.06  Aligned_cols=129  Identities=21%  Similarity=0.239  Sum_probs=108.0

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||+|...+   .+|+|.+...........+.+..|..++..+ +|||++++++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            479999999999999865   4999999764322334455677788888766 899999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|...+...+ .+++..+..++.|++.                      +|.++|+++++|||+|+.|++..+.+
T Consensus        81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDikp~Nill~~~~  133 (321)
T cd05591          81 GDLMFQIQRSR-KFDEPRSRFYAAEVTL----------------------ALMFLHRHGVIYRDLKLDNILLDAEG  133 (321)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCCHHHeEECCCC
Confidence            99999988655 6889988888887777                      78888899999999999999986643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.89  E-value=3.3e-22  Score=137.65  Aligned_cols=128  Identities=22%  Similarity=0.357  Sum_probs=109.7

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||+|....   .+++|.+...  ........+.+|+.+++.++|||++++++++......+++|||++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCcc--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            479999999999998854   4999987654  34455677899999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++...+..+++..+..++.|++.                      +|.++|+++++|||+++.|++....+
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~L~~lH~~~i~H~dl~p~nil~~~~~  131 (252)
T cd05084          79 DFLTFLRTEGPRLKVKELIQMVENAAA----------------------GMEYLESKHCIHRDLAARNCLVTEKN  131 (252)
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccccccchheEEEcCCC
Confidence            999999765546889999999888877                      77778888999999999998886543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.89  E-value=1.5e-22  Score=145.03  Aligned_cols=129  Identities=22%  Similarity=0.370  Sum_probs=100.7

Q ss_pred             CCCccccCceeeEEEEEEe--------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC-CceE
Q psy697            1 MGDRIGKGHFGTVYNGNWH--------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP-PHLA   70 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~--------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~~~   70 (157)
                      +.+.||+|+||.||+|.+.        ..+|+|.+...  ........+.+|+.++..+ +||||+++++++... +.++
T Consensus        11 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~   88 (338)
T cd05102          11 LGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG--ATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLM   88 (338)
T ss_pred             eeeEeccCCcceEEEEEEeccCCcccchhhheeccccc--cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceE
Confidence            3578999999999999752        14999998753  2334456788999999999 899999999988764 4689


Q ss_pred             EEEecCCCCCHhHHHhhhcc------------------------------------------------------------
Q psy697           71 IVTSKCNGHTLYTNIHIYKE------------------------------------------------------------   90 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~~------------------------------------------------------------   90 (157)
                      ++|||+++|+|.+++...+.                                                            
T Consensus        89 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (338)
T cd05102          89 VIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWK  168 (338)
T ss_pred             EEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccccc
Confidence            99999999999999875321                                                            


Q ss_pred             -cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           91 -KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        91 -~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                       .+++..+..++.                      +++.+|+++|+++++|||+|+.|++....
T Consensus       169 ~~l~~~~~~~~~~----------------------qi~~aL~~LH~~~ivHrDiKp~Nil~~~~  210 (338)
T cd05102         169 SPLTMEDLICYSF----------------------QVARGMEFLASRKCIHRDLAARNILLSEN  210 (338)
T ss_pred             CCCCHHHHHHHHH----------------------HHHHHHHHHHHCCEECCCCccceEEEcCC
Confidence             133444444444                      45558999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.89  E-value=1.3e-22  Score=144.35  Aligned_cols=129  Identities=19%  Similarity=0.155  Sum_probs=108.2

Q ss_pred             CCccccCceeeEEEEEEe------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWH------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ++.||+|+||.||++...      ..+|+|++.... ........+..|+.++.+++||||+++++.+...+.++++|||
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   79 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKAT-LKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF   79 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHH-hhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence            367999999999998762      149999997643 2223345667899999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+|.+++.... .+++..+..++.|++.                      +|.++|+++++|||+|+.|++.....
T Consensus        80 ~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlkp~Nil~~~~~  135 (318)
T cd05582          80 LRGGDLFTRLSKEV-MFTEEDVKFYLAELAL----------------------ALDHLHSLGIIYRDLKPENILLDEEG  135 (318)
T ss_pred             CCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEecCCCCHHHeEECCCC
Confidence            99999999997654 6899999999998777                      77778888999999999999886543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0574|consensus

Probab=99.89  E-value=2.6e-24  Score=147.38  Aligned_cols=126  Identities=18%  Similarity=0.310  Sum_probs=112.4

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.+||+|+||.||++.++..   +|+|.++..     .+.+..+.|+.++.+++.|++|++||.|+....+|+|||||..
T Consensus        38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            46799999999999998773   899999764     4678899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++.+.++.++.++++.++..+...                      -+++|+|+|.-+.+|||+|++|+|....+
T Consensus       113 GSiSDI~R~R~K~L~E~EIs~iL~~----------------------TLKGL~YLH~~~KIHRDIKAGNILLNT~G  166 (502)
T KOG0574|consen  113 GSISDIMRARRKPLSEQEISAVLRD----------------------TLKGLQYLHDLKKIHRDIKAGNILLNTDG  166 (502)
T ss_pred             CcHHHHHHHhcCCccHHHHHHHHHH----------------------HHhHHHHHHHHHHHHhhcccccEEEcccc
Confidence            9999999988778999988877774                      44599999999999999999999987644

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.89  E-value=8.6e-23  Score=145.42  Aligned_cols=129  Identities=24%  Similarity=0.244  Sum_probs=107.8

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||+|..+.   .+|+|.+.............+..|..++... +|||++++++++...+.++++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999865   4999998754322233455667788888776 799999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        81 g~L~~~i~~~~-~l~~~~~~~~~~ql~~----------------------~L~~lH~~~ivH~dlkp~NIli~~~~  133 (320)
T cd05590          81 GDLMFHIQKSR-RFDEARARFYAAEITS----------------------ALMFLHDKGIIYRDLKLDNVLLDHEG  133 (320)
T ss_pred             chHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeCCCCHHHeEECCCC
Confidence            99999998755 7899999988887777                      77788888999999999999987654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.89  E-value=1.2e-22  Score=144.43  Aligned_cols=129  Identities=24%  Similarity=0.255  Sum_probs=105.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||+|...+   .+|+|.+...........+....|..++... +||||+++++.+...+.++++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999865   4999999764322233344555666666654 899999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~----------------------al~~LH~~~ivH~dlkp~Nill~~~~  133 (316)
T cd05592          81 GDLMFHIQSSG-RFDEARARFYAAEIIC----------------------GLQFLHKKGIIYRDLKLDNVLLDKDG  133 (316)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEeCCCCHHHeEECCCC
Confidence            99999998655 7899999999887777                      77778888999999999999886543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.89  E-value=1.7e-22  Score=144.29  Aligned_cols=129  Identities=19%  Similarity=0.219  Sum_probs=109.7

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||++....   .+|+|.+......+....+.+..|..++..+ .|||++++++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            479999999999998855   4999999865433344566788899988888 699999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|...+...+ .+++..+..++.|++.                      +++++|+++++|||+|+.|++..+..
T Consensus        81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~----------------------al~~lH~~~ivHrDlkp~Nili~~~~  133 (327)
T cd05617          81 GDLMFHMQRQR-KLPEEHARFYAAEICI----------------------ALNFLHERGIIYRDLKLDNVLLDADG  133 (327)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCCHHHEEEeCCC
Confidence            99999887655 7999999999998777                      77788888999999999999886543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0588|consensus

Probab=99.89  E-value=4.8e-23  Score=152.64  Aligned_cols=131  Identities=16%  Similarity=0.148  Sum_probs=115.0

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +++.||.|+-|.|.+|.+..   ..|+|++++..-..........+|+.+|+-+.|||++.+++.+.+...+|++.||++
T Consensus        16 LgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~   95 (786)
T KOG0588|consen   16 LGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVP   95 (786)
T ss_pred             ccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecC
Confidence            57889999999999999876   389999998743445556778899999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.|++++-..+ ++++.++..++.||+.                      ++.|+|..+|+|||+|++|+|....+
T Consensus        96 gGELFdylv~kG-~l~e~eaa~ff~QIi~----------------------gv~yCH~~~icHRDLKpENlLLd~~~  149 (786)
T KOG0588|consen   96 GGELFDYLVRKG-PLPEREAAHFFRQILD----------------------GVSYCHAFNICHRDLKPENLLLDVKN  149 (786)
T ss_pred             CchhHHHHHhhC-CCCCHHHHHHHHHHHH----------------------HHHHHhhhcceeccCCchhhhhhccc
Confidence            999999999866 8999999999998887                      66666777999999999999887654

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.89  E-value=8.9e-23  Score=147.98  Aligned_cols=129  Identities=17%  Similarity=0.103  Sum_probs=108.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.++............+.+|+.++..++|||++++++++.....++++|||+++
T Consensus        48 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~g  127 (370)
T cd05596          48 IKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPG  127 (370)
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCC
Confidence            4679999999999999865   4999999754323334455677899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus       128 g~L~~~l~~~--~l~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDLkp~NILl~~~~  179 (370)
T cd05596         128 GDLVNLMSNY--DIPEKWARFYTAEVVL----------------------ALDAIHSMGFIHRDVKPDNMLLDKSG  179 (370)
T ss_pred             CcHHHHHHhc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCCHHHEEEcCCC
Confidence            9999998753  5788888888887777                      78888888999999999999986543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.89  E-value=1e-22  Score=145.47  Aligned_cols=131  Identities=17%  Similarity=0.162  Sum_probs=111.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.............+..|+.++..++|||++++++.+...+.++++|||+++
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   85 (330)
T cd05601           6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPG   85 (330)
T ss_pred             EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCC
Confidence            4689999999999998754   4999999864322334566788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        86 ~~L~~~l~~~~~~l~~~~~~~~~~qi~~----------------------aL~~lH~~~i~H~Dlkp~NIll~~~~  139 (330)
T cd05601          86 GDLLSLLNRYEDQFDEDMAQFYLAELVL----------------------AIHSVHQMGYVHRDIKPENVLIDRTG  139 (330)
T ss_pred             CCHHHHHHHhcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEcccCchHheEECCCC
Confidence            9999999876457999999998887777                      77888888999999999999887644

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.89  E-value=1.9e-22  Score=141.48  Aligned_cols=130  Identities=22%  Similarity=0.169  Sum_probs=108.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.............+.+|+.++..++|+|++++.+.+...+..+++|||+++
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~   84 (285)
T cd05631           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG   84 (285)
T ss_pred             EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCC
Confidence            4679999999999999854   5999998764322223344677899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+.+...+ ..+++..+..++.|++.                      +++++|+++++|||+|+.|++..+.
T Consensus        85 g~L~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~iiH~dikp~Nill~~~  138 (285)
T cd05631          85 GDLKFHIYNMGNPGFDEQRAIFYAAELCC----------------------GLEDLQRERIVYRDLKPENILLDDR  138 (285)
T ss_pred             CcHHHHHHhhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEeCCCCHHHEEECCC
Confidence            99998886533 25889999899888777                      7788888899999999999988654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.89  E-value=1.8e-22  Score=146.65  Aligned_cols=85  Identities=28%  Similarity=0.385  Sum_probs=72.3

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   72 (157)
                      ++.||+|+||.||+|.+..        .+|+|.+....  .....+.+.+|+.++..+ +||||+++++++...+..+++
T Consensus        40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv  117 (375)
T cd05104          40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVI  117 (375)
T ss_pred             hheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceee
Confidence            5789999999999997521        48999987542  234456788999999999 899999999999999999999


Q ss_pred             EecCCCCCHhHHHhhh
Q psy697           73 TSKCNGHTLYTNIHIY   88 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~   88 (157)
                      |||+++|+|.++++..
T Consensus       118 ~E~~~~g~L~~~l~~~  133 (375)
T cd05104         118 TEYCCYGDLLNFLRRK  133 (375)
T ss_pred             ehhccCCcHHHHHHhc
Confidence            9999999999999753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.89  E-value=4.1e-22  Score=142.28  Aligned_cols=130  Identities=16%  Similarity=0.124  Sum_probs=109.5

Q ss_pred             CCCccccC--ceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            1 MGDRIGKG--HFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         1 ~~~~lg~G--~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ++++||+|  +|+.||++..+.   .+|+|.+.... ........+.+|+.+++.++||||+++++++...+..+++|||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   80 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEA-CTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF   80 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhh-ccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence            46789999  688999998865   49999997653 2334556777899999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++|+|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus        81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------~L~~LH~~~iiH~dlkp~Nil~~~~  137 (327)
T cd08227          81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLK----------------------ALDYIHHMGYVHRSVKASHILISVD  137 (327)
T ss_pred             cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEecCCCChhhEEEecC
Confidence            99999999997642 25889989888887777                      8888999999999999999987653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0694|consensus

Probab=99.89  E-value=4e-23  Score=153.26  Aligned_cols=128  Identities=23%  Similarity=0.280  Sum_probs=111.6

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .++||+|+||+|++++.+++   +|+|.+++..+......+..+.|.+++.-. +||.++.++.+|.+..++++||||+.
T Consensus       373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~  452 (694)
T KOG0694|consen  373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVA  452 (694)
T ss_pred             EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecC
Confidence            57899999999999999873   999999998877777788888998888877 69999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||++....+ .+ .+++..+..++++|+.                      +|+++|+++||+||+|-.|+|....
T Consensus       453 Ggdm~~~~~-~~-~F~e~rarfyaAev~l----------------------~L~fLH~~~IIYRDlKLdNiLLD~e  504 (694)
T KOG0694|consen  453 GGDLMHHIH-TD-VFSEPRARFYAAEVVL----------------------GLQFLHENGIIYRDLKLDNLLLDTE  504 (694)
T ss_pred             CCcEEEEEe-cc-cccHHHHHHHHHHHHH----------------------HHHHHHhcCceeeecchhheEEccc
Confidence            999444443 23 7999999999996666                      8999999999999999999987643

>KOG1989|consensus

Probab=99.89  E-value=1.9e-22  Score=152.81  Aligned_cols=130  Identities=18%  Similarity=0.275  Sum_probs=107.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEE-ecC------CceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGAC-MKP------PHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~-~~~------~~~~   70 (157)
                      .+.|.+|+|+.||+|...+   ++|+|.+-.   .+....+.+.+|+.+|+.| .|+|||.+++.. ...      -++.
T Consensus        42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~---~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl  118 (738)
T KOG1989|consen   42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYV---NDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL  118 (738)
T ss_pred             EEEEccCCcEEEEEEEecCCCceeeeeeeec---CCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence            5679999999999999855   599999876   5778899999999999999 599999999943 221      3588


Q ss_pred             EEEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           71 IVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      ++||||.+|+|.+++..+. ..|++.++++|+.++++ ++.++|...+                   .|||||||-+|+|
T Consensus       119 lLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~-AVa~mH~~~p-------------------PiIHRDLKiENvL  178 (738)
T KOG1989|consen  119 LLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCE-AVAAMHYLKP-------------------PIIHRDLKIENVL  178 (738)
T ss_pred             eehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHH-HHHHHhcCCC-------------------ccchhhhhhhheE
Confidence            9999999999999998653 35999999999999999 5555444433                   5999999999999


Q ss_pred             ccccc
Q psy697          150 SRSAE  154 (157)
Q Consensus       150 ~~~~~  154 (157)
                      ....+
T Consensus       179 ls~~g  183 (738)
T KOG1989|consen  179 LSADG  183 (738)
T ss_pred             EcCCC
Confidence            87654

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.89  E-value=1.6e-22  Score=144.71  Aligned_cols=130  Identities=15%  Similarity=0.134  Sum_probs=109.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.+...........+..|..++..++|+|++++++++...+.++++|||+++
T Consensus         6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~   85 (332)
T cd05623           6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVG   85 (332)
T ss_pred             EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCC
Confidence            5689999999999999865   4999998653222233445577888999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+++...+..+++..+..++.|++.                      +++++|+++++|||+|+.|++....
T Consensus        86 g~L~~~l~~~~~~l~~~~~~~~~~qi~~----------------------al~~lH~~~iiHrDlkp~Nili~~~  138 (332)
T cd05623          86 GDLLTLLSKFEDRLPEDMARFYLAEMVI----------------------AIDSVHQLHYVHRDIKPDNILMDMN  138 (332)
T ss_pred             CcHHHHHHHhcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEecCCCHHHEEECCC
Confidence            9999999875547899988888887777                      7778888899999999999988654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.89  E-value=2.1e-22  Score=143.28  Aligned_cols=129  Identities=24%  Similarity=0.251  Sum_probs=108.3

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||++.+..   .+|+|.+.............+..|..++..+ +|||++++++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999865   4999999864322334456677888888877 799999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|...+...+ .+++..+..++.|++.                      +|.++|+++++|||+|+.|++..+..
T Consensus        81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~----------------------~l~~LH~~~ivH~dlkp~Nill~~~~  133 (318)
T cd05570          81 GDLMFHIQRSG-RFDEPRARFYAAEIVL----------------------GLQFLHERGIIYRDLKLDNVLLDSEG  133 (318)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEccCCCHHHeEECCCC
Confidence            99999988654 7899999999887777                      77778888999999999999886543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.89  E-value=1.6e-22  Score=146.75  Aligned_cols=129  Identities=16%  Similarity=0.087  Sum_probs=108.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+|+|.+.............+.+|..++..++|||++++++.+.....++++|||+++
T Consensus        48 ~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~g  127 (371)
T cd05622          48 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG  127 (371)
T ss_pred             EEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence            4679999999999999865   4899998753323334455677899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus       128 g~L~~~~~~~--~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDLkp~NIll~~~~  179 (371)
T cd05622         128 GDLVNLMSNY--DVPEKWARFYTAEVVL----------------------ALDAIHSMGFIHRDVKPDNMLLDKSG  179 (371)
T ss_pred             CcHHHHHHhc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEeCCCCHHHEEECCCC
Confidence            9999998754  5788888888887776                      78888999999999999999986543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.89  E-value=2.3e-22  Score=139.30  Aligned_cols=129  Identities=31%  Similarity=0.474  Sum_probs=109.9

Q ss_pred             CCccccCceeeEEEEEEe------c-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWH------G-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~------~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||.|.||.||+|.+.      + .++||.+...  ........+.+|+..+.+++||||++++|++...+..++++|
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccccc
Confidence            467999999999999998      1 4999999653  445568899999999999999999999999998888999999


Q ss_pred             cCCCCCHhHHHhhh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+++|+|.+++... ...+++.....++.|++.                      +|.++|+++++|+++++.|++..+.
T Consensus        82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~Lh~~~iiH~~l~~~nill~~~  139 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAE----------------------ALSYLHSNNIIHGNLSPSNILLDSN  139 (259)
T ss_dssp             --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHH----------------------HHHHHHHTTEEEST-SGGGEEEETT
T ss_pred             ccccccccccccccccccccccccccccccccc----------------------ccccccccccccccccccccccccc
Confidence            99999999999986 447999999999998888                      8888999999999999999988765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       140 ~  140 (259)
T PF07714_consen  140 G  140 (259)
T ss_dssp             T
T ss_pred             c
Confidence            4

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.89  E-value=2.1e-22  Score=143.43  Aligned_cols=129  Identities=22%  Similarity=0.215  Sum_probs=104.3

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHH-HHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEV-TTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||+|....   .+|+|.+.............+..|. .+++.++|||++++++.+...+..+++|||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999855   4999998754322223334455554 457788999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|...+.... .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~L~~lH~~~ivH~Dlkp~NIll~~~~  133 (321)
T cd05603          81 GELFFHLQRER-CFLEPRARFYAAEVAS----------------------AIGYLHSLNIIYRDLKPENILLDSQG  133 (321)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeccCCHHHeEECCCC
Confidence            99998887644 6889888888887777                      77788888999999999999886543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.88  E-value=5.3e-22  Score=145.14  Aligned_cols=86  Identities=31%  Similarity=0.475  Sum_probs=73.6

Q ss_pred             CCCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l   71 (157)
                      +++.||+|+||.||+|.+..        .+|+|.+...  ......+.+.+|+.++..+. ||||+++++++...+.+++
T Consensus        41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~l  118 (400)
T cd05105          41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT--ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYI  118 (400)
T ss_pred             hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC--CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEE
Confidence            45789999999999998632        3899999764  33455678999999999995 9999999999999999999


Q ss_pred             EEecCCCCCHhHHHhhh
Q psy697           72 VTSKCNGHTLYTNIHIY   88 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~   88 (157)
                      +||||++|+|.+++...
T Consensus       119 v~Ey~~~g~L~~~l~~~  135 (400)
T cd05105         119 ITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             EEEecCCCcHHHHHHHh
Confidence            99999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=7.9e-23  Score=147.01  Aligned_cols=130  Identities=17%  Similarity=0.126  Sum_probs=111.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.............+..|..++..++|||++++++.+...+..+++|||+++
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   85 (350)
T cd05573           6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPG   85 (350)
T ss_pred             EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCC
Confidence            4689999999999999863   5999999764322334456788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        86 ~~L~~~l~~~~-~l~~~~~~~i~~qi~~----------------------aL~~LH~~giiH~Dlkp~NIll~~~~  138 (350)
T cd05573          86 GDLMNLLIRKD-VFPEETARFYIAELVL----------------------ALDSVHKLGFIHRDIKPDNILIDADG  138 (350)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCCHHHeEECCCC
Confidence            99999998764 7899999999887777                      88889999999999999999986654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.88  E-value=3e-22  Score=140.65  Aligned_cols=128  Identities=20%  Similarity=0.236  Sum_probs=106.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+....  .......+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus        10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   87 (288)
T cd07871          10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEH--EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS   87 (288)
T ss_pred             eeEEecCCCEEEEEEEECCCCCEEEEEEecccc--cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc
Confidence            5689999999999998754   49999987542  222344667899999999999999999999999999999999974


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                       +|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        88 -~l~~~l~~~~~~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivH~dlkp~Nil~~~~~  140 (288)
T cd07871          88 -DLKQYLDNCGNLMSMHNVKIFMFQLLR----------------------GLSYCHKRKILHRDLKPQNLLINEKG  140 (288)
T ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCHHHEEECCCC
Confidence             999988765545788888888887777                      88888888999999999999886543

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.88  E-value=2.4e-22  Score=143.24  Aligned_cols=128  Identities=23%  Similarity=0.242  Sum_probs=104.1

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHH-HHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVT-TFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||++....   .+|+|.+.............+..|.. ++..++|||++++++.+...+..+++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            479999999999999854   49999997643222223344445544 45778999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|..++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus        81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~givH~dikp~NIll~~~  132 (323)
T cd05575          81 GELFFHLQRER-SFPEPRARFYAAEIAS----------------------ALGYLHSLNIIYRDLKPENILLDSQ  132 (323)
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeCCCCHHHeEECCC
Confidence            99999998654 7899988888887777                      8888899999999999999988654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.88  E-value=2.4e-22  Score=143.29  Aligned_cols=130  Identities=22%  Similarity=0.184  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC-CceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH-ENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|...+   .+|+|++...........+.+..|..++..++| ++++.+++++...+.++++|||++
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   84 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN   84 (324)
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC
Confidence            5789999999999999865   499999976432233455677888889998866 468889999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        85 ~g~L~~~~~~~~-~~~~~~~~~~~~qi~~----------------------al~~lH~~~ivH~dlkp~Nill~~~~  138 (324)
T cd05587          85 GGDLMYHIQQVG-KFKEPHAVFYAAEIAI----------------------GLFFLHSKGIIYRDLKLDNVMLDAEG  138 (324)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEecCCCHHHeEEcCCC
Confidence            999999997654 6899999888887777                      77888888999999999999887543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.88  E-value=2.6e-22  Score=143.14  Aligned_cols=130  Identities=21%  Similarity=0.207  Sum_probs=107.4

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCC-CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYL-DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||++....      .+|+|.+..... .+......+..|+.++..++||||+++++.+...+.++++||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            3689999999999998631      499999875321 122334567789999999999999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++++|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~dlkp~Nil~~~~~  137 (323)
T cd05584          81 YLSGGELFMHLEREG-IFMEDTACFYLSEISL----------------------ALEHLHQQGIIYRDLKPENILLDAQG  137 (323)
T ss_pred             CCCCchHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHeEECCCC
Confidence            999999999998654 6888888888887776                      78888888999999999999986543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.88  E-value=3.2e-22  Score=142.77  Aligned_cols=129  Identities=23%  Similarity=0.224  Sum_probs=104.9

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHH-HHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVT-TFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||++....   .+|+|++.............+..|.. +++.++||||+++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            479999999999998754   49999997543222233344455544 46778999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|...+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------al~~lH~~givH~Dlkp~NIll~~~~  133 (325)
T cd05604          81 GELFFHLQRER-SFPEPRARFYAAEIAS----------------------ALGYLHSINIVYRDLKPENILLDSQG  133 (325)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCCHHHeEECCCC
Confidence            99999887654 7899999999887777                      77888889999999999999886543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0585|consensus

Probab=99.88  E-value=1.9e-22  Score=144.74  Aligned_cols=131  Identities=21%  Similarity=0.215  Sum_probs=104.2

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCH-----------HHHHHHHHHHHHHHhcCCCceeeeeeEEecC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE-----------KTWEAFKLEVTTFRKTRHENLVLFMGACMKP   66 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~   66 (157)
                      +.+.||+|.||.|.+|+...   -||+|++++......           ...+.+.+|+.+|+++.|||+|+++.+..++
T Consensus       101 l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP  180 (576)
T KOG0585|consen  101 LIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDP  180 (576)
T ss_pred             hhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCc
Confidence            35789999999999998744   499999986442110           1135788999999999999999999988764


Q ss_pred             --CceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           67 --PHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        67 --~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                        +.+|+|+|||..|.+...-.. +..+++.++++++.                      +++.+|+|+|.++|+|||+|
T Consensus       181 ~s~~~YlVley~s~G~v~w~p~d-~~els~~~Ar~ylr----------------------Dvv~GLEYLH~QgiiHRDIK  237 (576)
T KOG0585|consen  181 ESDKLYLVLEYCSKGEVKWCPPD-KPELSEQQARKYLR----------------------DVVLGLEYLHYQGIIHRDIK  237 (576)
T ss_pred             ccCceEEEEEeccCCccccCCCC-cccccHHHHHHHHH----------------------HHHHHHHHHHhcCeeccccc
Confidence              679999999998877543332 21378888888877                      55559999999999999999


Q ss_pred             Cccccccccc
Q psy697          145 HPLNLSRSAE  154 (157)
Q Consensus       145 ~~~~~~~~~~  154 (157)
                      +.|+|..+.+
T Consensus       238 PsNLLl~~~g  247 (576)
T KOG0585|consen  238 PSNLLLSSDG  247 (576)
T ss_pred             hhheEEcCCC
Confidence            9999987764

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.88  E-value=3.4e-22  Score=142.19  Aligned_cols=129  Identities=24%  Similarity=0.261  Sum_probs=105.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||+|....   .+|+|.+................|..++... +|||++++++++...+.++++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            479999999999999865   4999999764321123344556677777764 999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++.... .+++..+..++.|++.                      +++++|+++++|||+|+.|++..+..
T Consensus        81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------al~~LH~~~ivHrdikp~Nil~~~~~  133 (316)
T cd05619          81 GDLMFHIQSCH-KFDLPRATFYAAEIIC----------------------GLQFLHSKGIVYRDLKLDNILLDTDG  133 (316)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEeCCCCHHHEEECCCC
Confidence            99999998654 6889998888887777                      77778888999999999999886543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.88  E-value=6.6e-22  Score=138.39  Aligned_cols=127  Identities=25%  Similarity=0.263  Sum_probs=104.6

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      ||+|+||.||++....   .+|+|.+.............+..|+.++..++|||++++.+++......+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            6999999999998754   4999998764322233345677899999999999999999999999999999999999999


Q ss_pred             hHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           82 YTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        82 ~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      .+.+...   ...+++..+..++.|++.                      +++++|+++++|||+|+.|++....
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlkp~Nili~~~  133 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIIS----------------------GLEHLHQRRIIYRDLKPENVLLDND  133 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEECCC
Confidence            8887532   235889999999998777                      7777888899999999999887543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.88  E-value=9.9e-22  Score=140.56  Aligned_cols=128  Identities=18%  Similarity=0.210  Sum_probs=109.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+...  ........+.+|+.++..++|||++++++++...+.++++|||+++
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   87 (331)
T cd06649          10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG   87 (331)
T ss_pred             EEeecCCCCEEEEEEEECCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCC
Confidence            4689999999999999865   3899998764  2345567889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      ++.++|++ +++|||+|+.|++..+..
T Consensus        88 ~~L~~~l~~~~-~~~~~~~~~~~~~i~~----------------------~l~~lH~~~~ivH~dlkp~Nil~~~~~  141 (331)
T cd06649          88 GSLDQVLKEAK-RIPEEILGKVSIAVLR----------------------GLAYLREKHQIMHRDVKPSNILVNSRG  141 (331)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHhhcCCEEcCCCChhhEEEcCCC
Confidence            99999998755 6889988888887777                      77778875 589999999999886543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.88  E-value=5.5e-22  Score=144.04  Aligned_cols=129  Identities=24%  Similarity=0.378  Sum_probs=104.3

Q ss_pred             CCCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l   71 (157)
                      +++.||+|+||.||++....        .+|+|.+....  .......+.+|+.+++.+ +|+||+++++++...+..++
T Consensus        42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~l  119 (374)
T cd05106          42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLV  119 (374)
T ss_pred             ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEE
Confidence            36789999999999998532        49999997642  334466788999999999 89999999999999999999


Q ss_pred             EEecCCCCCHhHHHhhhc--------------------------------------------------------------
Q psy697           72 VTSKCNGHTLYTNIHIYK--------------------------------------------------------------   89 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~--------------------------------------------------------------   89 (157)
                      +|||+++|+|.+++....                                                              
T Consensus       120 v~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (374)
T cd05106         120 ITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKD  199 (374)
T ss_pred             eHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccc
Confidence            999999999999986532                                                              


Q ss_pred             -------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           90 -------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        90 -------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                             ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus       200 ~~~~~~~~~l~~~~~~~i~~qi~~----------------------aL~yLH~~giiHrDLkp~Nil~~~~  248 (374)
T cd05106         200 EEDTEDSWPLDLDDLLRFSSQVAQ----------------------GMDFLASKNCIHRDVAARNVLLTDG  248 (374)
T ss_pred             hhccCCCCCcCHHHHHHHHHHHHH----------------------HHHHHHHCCEEeccCchheEEEeCC
Confidence                   12455556666665555                      8888999999999999999988643

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.88  E-value=3.7e-22  Score=141.95  Aligned_cols=129  Identities=23%  Similarity=0.227  Sum_probs=105.8

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||+|....   .+|+|.+................|..++... +|||++++++++...+.++++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            479999999999999865   4999999764321123344566677777654 899999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++.++..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        81 g~L~~~i~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivHrDlkp~Nil~~~~~  133 (316)
T cd05620          81 GDLMFHIQDKG-RFDLYRATFYAAEIVC----------------------GLQFLHSKGIIYRDLKLDNVMLDRDG  133 (316)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEecCCCHHHeEECCCC
Confidence            99999988654 6889998888887777                      78888999999999999999887644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.88  E-value=1.5e-21  Score=135.44  Aligned_cols=129  Identities=22%  Similarity=0.297  Sum_probs=111.1

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..      .+++|.++..  ........+..|+.++..++|||++++++.+...+..+++|||
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~   86 (266)
T cd05033           9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG--SSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEY   86 (266)
T ss_pred             eeEecCCccceEEEEEEccCCCCcceEEEEEcCCC--CChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEc
Confidence            5789999999999998742      3899988764  3345567788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.+++....+.+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+..
T Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~Lh~~~i~H~di~p~nili~~~~  143 (266)
T cd05033          87 MENGSLDKFLRENDGKFTVGQLVGMLRGIAS----------------------GMKYLSEMNYVHRDLAARNILVNSNL  143 (266)
T ss_pred             CCCCCHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCcceEEEcCCC
Confidence            9999999999876557899999999998877                      77788888999999999999887643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.88  E-value=4.7e-22  Score=141.87  Aligned_cols=129  Identities=23%  Similarity=0.210  Sum_probs=103.1

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHH-HHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEV-TTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||++.+..   .+|+|++.............+..|. .++..++||||+++++++...+.++++|||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            479999999999999865   4999998753211222233344444 456778999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        81 ~~L~~~~~~~~-~~~~~~~~~~~~qi~~----------------------~L~~lH~~giiHrDlkp~Nili~~~~  133 (325)
T cd05602          81 GELFYHLQRER-CFLEPRARFYAAEIAS----------------------ALGYLHSLNIVYRDLKPENILLDSQG  133 (325)
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEecCCCHHHeEECCCC
Confidence            99999998754 6888888888887777                      88888899999999999999886543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.88  E-value=5.5e-22  Score=140.17  Aligned_cols=128  Identities=20%  Similarity=0.231  Sum_probs=106.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+....  .......+.+|+.+++.++|||++++++++......+++|||++ 
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-   86 (303)
T cd07869          10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQE--EEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-   86 (303)
T ss_pred             eeeEEecCCEEEEEEEECCCCCEEEEEEecccc--ccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-
Confidence            5789999999999999854   49999987542  12223456789999999999999999999999999999999995 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++....+.+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~~ivH~dlkp~Nill~~~~  140 (303)
T cd07869          87 TDLCQYMDKHPGGLHPENVKLFLFQLLR----------------------GLSYIHQRYILHRDLKPQNLLISDTG  140 (303)
T ss_pred             cCHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEECCCC
Confidence            6888888765556888888888887777                      78888888999999999999886543

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG4717|consensus

Probab=99.88  E-value=2.5e-22  Score=145.99  Aligned_cols=132  Identities=20%  Similarity=0.219  Sum_probs=114.6

Q ss_pred             CCccccCceeeEEEEEE---ecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNW---HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~---~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|-|+.|.+|++   ...||||+++++. .+......+..|++.|+-++|||||++|....++..+|+++|+-.+
T Consensus        23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTK-lD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~  101 (864)
T KOG4717|consen   23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTK-LDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDG  101 (864)
T ss_pred             hhhhcCCceehhhhhhhhcccceeEEEEecccc-cchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCC
Confidence            57899999999999987   3369999999998 4555667788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccCC
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESV  156 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~~  156 (157)
                      |+|+++|.++...+.+....+++.||.. ++.|||+-                     .++|||+|++|+++.+.-.|
T Consensus       102 GDl~DyImKHe~Gl~E~La~kYF~QI~~-AI~YCHqL---------------------HVVHRDLKPENVVFFEKlGl  157 (864)
T KOG4717|consen  102 GDLFDYIMKHEEGLNEDLAKKYFAQIVH-AISYCHQL---------------------HVVHRDLKPENVVFFEKLGL  157 (864)
T ss_pred             chHHHHHHhhhccccHHHHHHHHHHHHH-HHHHHhhh---------------------hhhcccCCcceeEEeeecCc
Confidence            9999999998778999999999998888 66666544                     77999999999988776543

>KOG1026|consensus

Probab=99.88  E-value=1.2e-22  Score=153.62  Aligned_cols=127  Identities=21%  Similarity=0.354  Sum_probs=110.5

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||+||+|+..+        -||||.++..  .+....+.|.+|+.++..++|||||+++|.|...+.+++|+
T Consensus       491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF  568 (774)
T KOG1026|consen  491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF  568 (774)
T ss_pred             hhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence            4689999999999998744        2999999875  44557899999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc---------c----cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccc
Q psy697           74 SKCNGHTLYTNIHIYK---------E----KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILA  140 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~---------~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~  140 (157)
                      ||+..|||.++++.+.         .    +++..+.+.++.|||.                      +++||.++.++|
T Consensus       569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAa----------------------GM~YLs~~~FVH  626 (774)
T KOG1026|consen  569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAA----------------------GMEYLSSHHFVH  626 (774)
T ss_pred             EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCcccc
Confidence            9999999999998542         1    2788899999999998                      888888889999


Q ss_pred             cCCCCccccccc
Q psy697          141 RSPSHPLNLSRS  152 (157)
Q Consensus       141 rd~k~~~~~~~~  152 (157)
                      |||...|-|..+
T Consensus       627 RDLATRNCLVge  638 (774)
T KOG1026|consen  627 RDLATRNCLVGE  638 (774)
T ss_pred             cchhhhhceecc
Confidence            999888877654

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.88  E-value=1.4e-21  Score=142.94  Aligned_cols=86  Identities=31%  Similarity=0.489  Sum_probs=73.4

Q ss_pred             CCCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l   71 (157)
                      +++.||+|+||.||+|.+.+        .+|+|.+....  .....+.+.+|+.++..+. |||++++++++...+..++
T Consensus        41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~i  118 (401)
T cd05107          41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYI  118 (401)
T ss_pred             hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEE
Confidence            35789999999999998642        49999997642  2334567889999999997 9999999999999999999


Q ss_pred             EEecCCCCCHhHHHhhh
Q psy697           72 VTSKCNGHTLYTNIHIY   88 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~   88 (157)
                      +|||+++|+|.+++...
T Consensus       119 v~E~~~~g~L~~~l~~~  135 (401)
T cd05107         119 ITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             EEeccCCCcHHHHHHhc
Confidence            99999999999999754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.88  E-value=1.4e-21  Score=135.66  Aligned_cols=129  Identities=23%  Similarity=0.317  Sum_probs=109.6

Q ss_pred             CCCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            1 MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      +.+.||+|+||.||+|....      .+++|.+....  .......+.+|+.++..++|||++++++++...+..+++||
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (267)
T cd05066           8 IEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE   85 (267)
T ss_pred             eeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence            35789999999999998742      38899887642  34456788999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+++++|.+++......+++..+..++.|++.                      ++.++|+++++|||+|+.|++..+.
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lH~~~i~h~dlkp~nili~~~  142 (267)
T cd05066          86 YMENGSLDAFLRKHDGQFTVIQLVGMLRGIAS----------------------GMKYLSDMGYVHRDLAARNILVNSN  142 (267)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeehhhchhcEEECCC
Confidence            99999999999876556899999999887777                      7777888899999999999887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.88  E-value=1.6e-21  Score=135.31  Aligned_cols=125  Identities=21%  Similarity=0.273  Sum_probs=105.5

Q ss_pred             CccccCceeeEEEEEEec---------------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---------------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP   67 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---------------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~   67 (157)
                      +.||+|+||.||+|....               .+++|.+...   .......+..|+.++..++|||++++++++....
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            468999999999997421               3788887652   2345567888889999999999999999999988


Q ss_pred             ceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           68 HLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        68 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ..+++|||+++|+|..++......+++..+..++.|++.                      +++++|+++++|||+|+.|
T Consensus        78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~ivH~dlkp~N  135 (262)
T cd05077          78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLAS----------------------ALSYLEDKDLVHGNVCTKN  135 (262)
T ss_pred             CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHhhhCCeECCCCCccc
Confidence            999999999999999988765556899999999888877                      8888899999999999999


Q ss_pred             ccccc
Q psy697          148 NLSRS  152 (157)
Q Consensus       148 ~~~~~  152 (157)
                      ++...
T Consensus       136 ill~~  140 (262)
T cd05077         136 ILLAR  140 (262)
T ss_pred             EEEec
Confidence            99854

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG1095|consensus

Probab=99.88  E-value=5.6e-22  Score=154.54  Aligned_cols=128  Identities=23%  Similarity=0.356  Sum_probs=114.4

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|.||.||.|...+        .||+|.+.+.  .+......|.+|..+|++++||||++++|.+......+|++
T Consensus       697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l  774 (1025)
T KOG1095|consen  697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL  774 (1025)
T ss_pred             eeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence            5689999999999999855        2888888775  56777889999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhh------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           74 SKCNGHTLYTNIHIY------KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        74 e~~~~g~L~~~i~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      |||++|+|..+|+..      ...++......++.+||+                      +++|+++++.+||||.+.|
T Consensus       775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~----------------------G~~YLe~~~fvHRDLAaRN  832 (1025)
T KOG1095|consen  775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAK----------------------GMNYLESKHFVHRDLAARN  832 (1025)
T ss_pred             hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhh----------------------hhHHHHhCCCcCcchhhhh
Confidence            999999999999986      446888899999999998                      8888999999999999999


Q ss_pred             cccccc
Q psy697          148 NLSRSA  153 (157)
Q Consensus       148 ~~~~~~  153 (157)
                      .|..+.
T Consensus       833 CLL~~~  838 (1025)
T KOG1095|consen  833 CLLDER  838 (1025)
T ss_pred             eeeccc
Confidence            887665

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.88  E-value=1.8e-21  Score=139.41  Aligned_cols=128  Identities=17%  Similarity=0.222  Sum_probs=108.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+++|.+...  ........+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus        10 ~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   87 (333)
T cd06650          10 ISELGAGNGGVVFKVSHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG   87 (333)
T ss_pred             eccccCCCCEEEEEEEECCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCC
Confidence            5789999999999999865   3888988764  2344566788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      ++.++|++ +++|||+|+.|++..+.+
T Consensus        88 ~~L~~~l~~~~-~~~~~~~~~~~~~l~~----------------------~l~~lH~~~~ivH~dlkp~Nili~~~~  141 (333)
T cd06650          88 GSLDQVLKKAG-RIPEQILGKVSIAVIK----------------------GLTYLREKHKIMHRDVKPSNILVNSRG  141 (333)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhcCCEEecCCChhhEEEcCCC
Confidence            99999998755 6888888888887777                      77778864 699999999999986643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0607|consensus

Probab=99.88  E-value=1.1e-22  Score=140.21  Aligned_cols=128  Identities=24%  Similarity=0.292  Sum_probs=113.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+|+.|-.+..-.   ++|||++.+.   ..-.+..+.+|+.++.++ .|+||++++.+|+....+|+|||-+.
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~  159 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMR  159 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEeccc
Confidence            3679999999999987533   5999999884   445677888999999988 79999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      ||.|.+.|++++ .|++.++..++.+|+.                      +|+.+|.++|.|||+|+.|+|-.+-+.
T Consensus       160 GGplLshI~~~~-~F~E~EAs~vvkdia~----------------------aLdFlH~kgIAHRDlKPENiLC~~pn~  214 (463)
T KOG0607|consen  160 GGPLLSHIQKRK-HFNEREASRVVKDIAS----------------------ALDFLHTKGIAHRDLKPENILCESPNK  214 (463)
T ss_pred             CchHHHHHHHhh-hccHHHHHHHHHHHHH----------------------HHHHHhhcCcccccCCccceeecCCCC
Confidence            999999999877 8999999999998888                      888899999999999999999776554

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.88  E-value=1.1e-21  Score=135.35  Aligned_cols=126  Identities=25%  Similarity=0.384  Sum_probs=107.3

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++.++.  .+++|.+....    .....+.+|+.+++.++|||++++++++......+++|||+++|
T Consensus         9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~   84 (256)
T cd05114           9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEGA----MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENG   84 (256)
T ss_pred             eeEecCCcCceEEEEEeccCceEEEEecccCC----ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCC
Confidence            4679999999999998866  48999876532    22456788999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.+++......+++..+..++.|++.                      +|+++|+++++|||+++.|++....
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~p~ni~i~~~  136 (256)
T cd05114          85 CLLNYLRQRQGKLSKDMLLSMCQDVCE----------------------GMEYLERNSFIHRDLAARNCLVSST  136 (256)
T ss_pred             cHHHHHHhCccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccccCcceEEEcCC
Confidence            999999865446888888888887777                      7788888899999999999888654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.88  E-value=3.6e-22  Score=142.44  Aligned_cols=129  Identities=22%  Similarity=0.279  Sum_probs=105.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHH---HhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTF---RKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||++....   .+|+|.+...........+.+..|..++   ..++|||++++++++...+.++++|||
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~   83 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY   83 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence            5789999999999998855   4999999764322233345566666554   466899999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|...+..  ..+++..+..++.|++.                      +++++|+++++|||+|+.|++..+.+
T Consensus        84 ~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~----------------------al~~lH~~~ivHrdlkp~Nill~~~~  138 (324)
T cd05589          84 AAGGDLMMHIHT--DVFSEPRAVFYAACVVL----------------------GLQYLHENKIVYRDLKLDNLLLDTEG  138 (324)
T ss_pred             CCCCcHHHHhhc--CCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEecCCCHHHeEECCCC
Confidence            999999988864  26899999999887777                      77788888999999999999887654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0196|consensus

Probab=99.88  E-value=9.3e-23  Score=153.46  Aligned_cols=129  Identities=22%  Similarity=0.297  Sum_probs=115.5

Q ss_pred             CCCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            1 MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      +.++||.|.||.|++|+++.      .||+|.++..  -..+.+..|+.|..+|.+++||||+.+.|.......+.|++|
T Consensus       633 Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE  710 (996)
T KOG0196|consen  633 IEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE  710 (996)
T ss_pred             EEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence            35789999999999999854      4999999876  456778999999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||++|+|+.+++.+.+.|++-+...|..+|+.                      +++|+.+.+-+||||.+.|+|..+.
T Consensus       711 yMENGsLDsFLR~~DGqftviQLVgMLrGIAs----------------------GMkYLsdm~YVHRDLAARNILVNsn  767 (996)
T KOG0196|consen  711 YMENGSLDSFLRQNDGQFTVIQLVGMLRGIAS----------------------GMKYLSDMNYVHRDLAARNILVNSN  767 (996)
T ss_pred             hhhCCcHHHHHhhcCCceEeehHHHHHHHHHH----------------------HhHHHhhcCchhhhhhhhheeeccc
Confidence            99999999999998888999999999999999                      6777777788888888888887653

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.88  E-value=4.5e-22  Score=141.91  Aligned_cols=130  Identities=22%  Similarity=0.195  Sum_probs=107.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|....   .+|+|++...........+.+..|..++..+. |++++++++++...+.++++|||++
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~   84 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN   84 (323)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence            4689999999999999854   49999997643222334556777888888885 5778889999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++.++..++.|++.                      +++++|+++++|||+|+.|++..+..
T Consensus        85 ~g~L~~~i~~~~-~l~~~~~~~i~~qi~~----------------------al~~lH~~~ivHrDikp~Nill~~~~  138 (323)
T cd05615          85 GGDLMYHIQQVG-KFKEPQAVFYAAEISV----------------------GLFFLHRRGIIYRDLKLDNVMLDSEG  138 (323)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCCHHHeEECCCC
Confidence            999999998655 7999999999998777                      77778888999999999999887543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.88  E-value=8.1e-22  Score=140.57  Aligned_cols=130  Identities=22%  Similarity=0.191  Sum_probs=107.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|....   .+|+|.+................|..++..+ .|++++++++++...+.++++|||++
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   84 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN   84 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence            5789999999999999865   4999999764322233344566677777777 68999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        85 ~g~L~~~~~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDlkp~Nill~~~~  138 (323)
T cd05616          85 GGDLMYQIQQVG-RFKEPHAVFYAAEIAI----------------------GLFFLHSKGIIYRDLKLDNVMLDSEG  138 (323)
T ss_pred             CCCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEecCCCHHHeEECCCC
Confidence            999999987655 7899999999887777                      78888888999999999999887653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.87  E-value=1.7e-21  Score=138.51  Aligned_cols=128  Identities=20%  Similarity=0.319  Sum_probs=107.6

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..       .+|+|.+...  ......+.+.+|+.+++.++|||++++++++... ..++++|
T Consensus        12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e   88 (316)
T cd05108          12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQ   88 (316)
T ss_pred             eeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeeee
Confidence            4679999999999998743       2899998753  3345567788999999999999999999988765 5679999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~L~~LH~~~iiH~dlkp~Nill~~~~  146 (316)
T cd05108          89 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK----------------------GMNYLEERRLVHRDLAARNVLVKTPQ  146 (316)
T ss_pred             cCCCCCHHHHHHhccccCCHHHHHHHHHHHHH----------------------HHHHHHhcCeeccccchhheEecCCC
Confidence            99999999999876546888888888888777                      88888999999999999999987643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.87  E-value=3.5e-22  Score=138.17  Aligned_cols=127  Identities=23%  Similarity=0.279  Sum_probs=107.3

Q ss_pred             CccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEE
Q psy697            3 DRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   72 (157)
                      +.||+|+||.||+|....          ++++|.+...   .....+.+..|..++..++|||++++++.+......+++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   77 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV   77 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence            479999999999998643          3777777542   334556788899999999999999999999998899999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++|+|.+++...+..+++..+..++.|++.                      +++++|+++++|||+|+.|++...
T Consensus        78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~iiH~dlkp~nili~~  135 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAW----------------------ALHFLEDKGLTHGNVCAKNVLLIR  135 (258)
T ss_pred             EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCccceEEEec
Confidence            9999999999999876546888888888887777                      888889999999999999998865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      .+
T Consensus       136 ~~  137 (258)
T cd05078         136 EE  137 (258)
T ss_pred             cc
Confidence            43

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0578|consensus

Probab=99.87  E-value=1.3e-22  Score=147.81  Aligned_cols=126  Identities=24%  Similarity=0.311  Sum_probs=111.3

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.+|+|+.|.||.+....   .||+|.+....   ....+-+.+|+.+|+..+|+|||.+++.|.-.+.+|+||||++||
T Consensus       279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~---Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~gg  355 (550)
T KOG0578|consen  279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRK---QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGG  355 (550)
T ss_pred             hhhccccccceeeeeeccCCceEEEEEEEecc---CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCC
Confidence            578999999999998755   49999998743   345677889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      +|.+.+...  .+++.++..++.++++                      +|+++|.++|+|||+|..|++....+.
T Consensus       356 sLTDvVt~~--~~~E~qIA~Icre~l~----------------------aL~fLH~~gIiHrDIKSDnILL~~~g~  407 (550)
T KOG0578|consen  356 SLTDVVTKT--RMTEGQIAAICREILQ----------------------GLKFLHARGIIHRDIKSDNILLTMDGS  407 (550)
T ss_pred             chhhhhhcc--cccHHHHHHHHHHHHH----------------------HHHHHHhcceeeeccccceeEeccCCc
Confidence            999999865  5899999999886666                      999999999999999999999877654

>KOG4721|consensus

Probab=99.87  E-value=1.5e-22  Score=148.51  Aligned_cols=120  Identities=23%  Similarity=0.411  Sum_probs=106.4

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      +=||+|+-|.||+|++.+ +||||.++..          -..++.-|++++|+||+.|.|.|....-+.|+||||+.|.|
T Consensus       130 eWlGSGaQGAVF~Grl~netVAVKKV~el----------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL  199 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRLHNETVAVKKVREL----------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL  199 (904)
T ss_pred             hhhccCcccceeeeeccCceehhHHHhhh----------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence            458999999999999987 6999988642          13467789999999999999999999999999999999999


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      ...++..+ .++......+..+||.                      +++|+|...|||||+|.||+|....|.
T Consensus       200 ~~VLka~~-~itp~llv~Wsk~IA~----------------------GM~YLH~hKIIHRDLKSPNiLIs~~d~  250 (904)
T KOG4721|consen  200 YEVLKAGR-PITPSLLVDWSKGIAG----------------------GMNYLHLHKIIHRDLKSPNILISYDDV  250 (904)
T ss_pred             HHHHhccC-ccCHHHHHHHHHHhhh----------------------hhHHHHHhhHhhhccCCCceEeeccce
Confidence            99999866 7899999999999888                      888899999999999999999876553

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.87  E-value=2.6e-21  Score=134.46  Aligned_cols=128  Identities=20%  Similarity=0.275  Sum_probs=103.3

Q ss_pred             CccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.||+|+||.||+|...+     .+++|.+...  ........+.+|+..++.++|||++++++.+......+++|||++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS--ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP   78 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCcc--CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence            469999999999997543     3778877543  234445677889999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcc----cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKE----KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|+|.+++...+.    ..++.....++.|++.                      +++++|+++++|||+|+.|++..+.
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~dlkp~Nill~~~  136 (269)
T cd05042          79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVAS----------------------GLLWLHQADFIHSDLALRNCQLTAD  136 (269)
T ss_pred             CCcHHHHHHhccccccccccHHHHHHHHHHHHH----------------------HHHHHHhcCEecccccHhheEecCC
Confidence            9999999976431    2356666777776666                      7888888999999999999888654


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       137 ~  137 (269)
T cd05042         137 L  137 (269)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.87  E-value=1.4e-21  Score=145.89  Aligned_cols=128  Identities=13%  Similarity=0.163  Sum_probs=107.4

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|++|.||+|....    .+++|.+..   .+......+.+|+.+++.++||||+++++.+...+..+++|||++
T Consensus        72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~---~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVML---NDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEeCCCcEEEEEEEcCCCCeEEEEEEccc---CCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            4678999999999998744    378887654   344555677889999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+.+...   ...+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus       149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~----------------------aL~~lH~~~ivHrDlkp~NIll~~~~  206 (478)
T PTZ00267        149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVL----------------------ALDEVHSRKMMHRDLKSANIFLMPTG  206 (478)
T ss_pred             CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEECCcCHHhEEECCCC
Confidence            99999988642   235888888888887777                      78888899999999999999987654

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1e-21  Score=137.78  Aligned_cols=130  Identities=22%  Similarity=0.172  Sum_probs=107.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.............+.+|+.+++.++|||++++++.+...+..+++|||+++
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   84 (285)
T cd05605           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG   84 (285)
T ss_pred             EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCC
Confidence            4679999999999998754   4999998764322233345577899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+++.... ..+++..+..++.|++.                      +++++|+++++|||+++.|++..+.
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~dlkp~Nil~~~~  138 (285)
T cd05605          85 GDLKFHIYNMGNPGFDEERAVFYAAEITC----------------------GLEDLHRERIVYRDLKPENILLDDY  138 (285)
T ss_pred             CcHHHHHHhcCcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcEecCCCHHHEEECCC
Confidence            99998886532 35899999999888777                      7777888899999999999887654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.2e-21  Score=140.05  Aligned_cols=127  Identities=23%  Similarity=0.209  Sum_probs=102.7

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc---CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT---RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ||+|+||.||+|....   .+|+|.+................|..++...   .|||++++++.+.....++++|||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            7999999999998854   4999998753322222333445566666554   799999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|...+...+ .+++..+..++.|++.                      +++++|+++++|||+|+.|++.....
T Consensus        81 g~L~~~l~~~~-~~~~~~~~~~~~qil~----------------------al~~LH~~~ivHrDlkp~Nili~~~~  133 (330)
T cd05586          81 GELFWHLQKEG-RFSEDRAKFYIAELVL----------------------ALEHLHKYDIVYRDLKPENILLDATG  133 (330)
T ss_pred             ChHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeccCCHHHeEECCCC
Confidence            99999988654 7899999999998777                      77778888999999999999886543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.87  E-value=3.2e-21  Score=134.02  Aligned_cols=128  Identities=22%  Similarity=0.280  Sum_probs=110.4

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|....      .+++|.+...  .+......+..|+..+..++|||++++.+++......+++|||
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~   86 (269)
T cd05065           9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEF   86 (269)
T ss_pred             EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEec
Confidence            5789999999999998753      3899998764  2455677899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++++|.+++...++.+++.++..++.|++.                      +++++|+++++|+|+++.|++..+.
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~----------------------al~~lH~~g~~H~dl~p~nili~~~  142 (269)
T cd05065          87 MENGALDSFLRQNDGQFTVIQLVGMLRGIAA----------------------GMKYLSEMNYVHRDLAARNILVNSN  142 (269)
T ss_pred             CCCCcHHHHHhhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeecccChheEEEcCC
Confidence            9999999999875556899999999888777                      7788888899999999999887543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.87  E-value=2.5e-21  Score=133.78  Aligned_cols=126  Identities=24%  Similarity=0.407  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++.+.+  .+|+|.+....    .....+.+|+.++..++|||++++++++......+++|||+.+|
T Consensus         9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd05113           9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS----MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG   84 (256)
T ss_pred             eeEecCcccceEEEEEecCCCcEEEEEcCCCc----ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence            4679999999999998765  48999887532    22356888999999999999999999999888899999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.+++...+..+++.++..++.|++.                      ++.++|+++++|+|+++.|++....
T Consensus        85 ~l~~~i~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~p~nili~~~  136 (256)
T cd05113          85 CLLNYLREHGKRFQPSQLLEMCKDVCE----------------------GMAYLESKQFIHRDLAARNCLVDDQ  136 (256)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccccCcceEEEcCC
Confidence            999999875446899999999998888                      7777888899999999999887654

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.87  E-value=4.9e-21  Score=131.66  Aligned_cols=128  Identities=21%  Similarity=0.339  Sum_probs=108.4

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      +.||+|+||.||++....  .+++|.+...  ........+.+|+.++..++|||++++++.+...+..+++|||+++++
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   78 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKED--LPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD   78 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCc--CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence            478999999999998654  4999988764  234455678899999999999999999999999999999999999999


Q ss_pred             HhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           81 LYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        81 L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |.+++......+++..+..++.|++.                      ++.++|+++++|+|+++.|++.....
T Consensus        79 L~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~~~H~dl~p~nili~~~~  130 (250)
T cd05085          79 FLSFLRKKKDELKTKQLVKFALDAAA----------------------GMAYLESKNCIHRDLAARNCLVGENN  130 (250)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeecccChheEEEcCCC
Confidence            99998765546888888888887777                      77778888999999999998886543

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=3.4e-21  Score=134.59  Aligned_cols=127  Identities=21%  Similarity=0.338  Sum_probs=110.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+..   ......+.+..|+.+++.++|||++++++.+......+++|||+++
T Consensus        10 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (280)
T cd06611          10 IGELGDGAFGKVYKAQHKETGLFAAAKIIQI---ESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDG   86 (280)
T ss_pred             HHHhcCCCCceEEEEEEcCCCcEEEEEEEee---CCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCC
Confidence            4679999999999999854   489999875   3455667888999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++...+..+++..+..++.|++.                      ++.++|+++++|+|+++.|++....
T Consensus        87 ~~L~~~~~~~~~~l~~~~~~~~~~ql~~----------------------~l~~lh~~~i~h~dl~p~nili~~~  139 (280)
T cd06611          87 GALDSIMLELERGLTEPQIRYVCRQMLE----------------------ALNFLHSHKVIHRDLKAGNILLTLD  139 (280)
T ss_pred             CcHHHHHHHhcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCChhhEEECCC
Confidence            9999999875557899999999998888                      7777888899999999999887654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.87  E-value=1.7e-21  Score=139.45  Aligned_cols=128  Identities=17%  Similarity=0.206  Sum_probs=105.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-----CceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-----PHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~   73 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ........+.+|+.+++.++|||++++++++...     ..++++|
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~   83 (338)
T cd07859           5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVF   83 (338)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEE
Confidence            5689999999999999754   49999987533 2334455788999999999999999999987643     2489999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+. ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.
T Consensus        84 e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~dlkp~NIll~~~  139 (338)
T cd07859          84 ELME-SDLHQVIKAND-DLTPEHHQFFLYQLLR----------------------ALKYIHTANVFHRDLKPKNILANAD  139 (338)
T ss_pred             ecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHeEECCC
Confidence            9995 68999987654 6899999999887777                      7888888899999999999988765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       140 ~  140 (338)
T cd07859         140 C  140 (338)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.87  E-value=3.5e-21  Score=134.57  Aligned_cols=128  Identities=23%  Similarity=0.204  Sum_probs=104.5

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      ||+|+||.||++..+.   .+|+|.+................|+.++..++|||++++++.+......+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            6999999999998764   4999998754322222334456689999999999999999999999999999999999999


Q ss_pred             hHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           82 YTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        82 ~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+.+.... ..+++..+..++.|++.                      +++++|+++++|||+|+.|++.....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~~ivH~dikp~Nili~~~~  132 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITC----------------------GILHLHSMDIVYRDMKPENVLLDDQG  132 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEEccCChHhEEEcCCC
Confidence            98886533 25788888888887777                      77788888999999999999886543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.87  E-value=2.2e-21  Score=149.74  Aligned_cols=129  Identities=19%  Similarity=0.213  Sum_probs=111.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|++......+......+..|+.++..++||||+++++.+.....++++|||+.+
T Consensus         9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g   88 (669)
T cd05610           9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIG   88 (669)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCC
Confidence            5689999999999999863   5999999765444555667888999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|.++|+|||+|+.|+|....
T Consensus        89 ~~L~~li~~~~-~l~~~~~~~i~~qil~----------------------aL~yLH~~gIiHrDLKP~NILl~~~  140 (669)
T cd05610          89 GDVKSLLHIYG-YFDEEMAVKYISEVAL----------------------ALDYLHRHGIIHRDLKPDNMLISNE  140 (669)
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEeCCccHHHEEEcCC
Confidence            99999998655 6888888888887776                      8888999999999999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PHA02988 hypothetical protein; Provisional

Probab=99.87  E-value=5.6e-21  Score=134.01  Aligned_cols=128  Identities=14%  Similarity=0.190  Sum_probs=106.7

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec----CCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK----PPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~   77 (157)
                      ..+|+|+++.||+|.+.+ .+|+|.+...........+.+.+|+.++.+++||||+++++++..    ...++++|||++
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~  105 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT  105 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence            467899999999999977 599999986543333445778899999999999999999999876    357899999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~  153 (157)
                      +|+|.+++...+ .+++.....++.+++.                      ++.++|.. +++|||+|+.|++..+.
T Consensus       106 ~g~L~~~l~~~~-~~~~~~~~~i~~~i~~----------------------~l~~lH~~~~~~Hrdlkp~nill~~~  159 (283)
T PHA02988        106 RGYLREVLDKEK-DLSFKTKLDMAIDCCK----------------------GLYNLYKYTNKPYKNLTSVSFLVTEN  159 (283)
T ss_pred             CCcHHHHHhhCC-CCChhHHHHHHHHHHH----------------------HHHHHHhcCCCCCCcCChhhEEECCC
Confidence            999999998755 6889999999988888                      66677763 77899999999887654

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.87  E-value=4.6e-21  Score=134.16  Aligned_cols=128  Identities=25%  Similarity=0.369  Sum_probs=107.3

Q ss_pred             CCccccCceeeEEEEEEe-------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH-------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~-------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv   72 (157)
                      .+.||+|+||.||++...       ..+++|.+..   ......+.+.+|+.++..++|||++++.+++...  ..++++
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   85 (284)
T cd05081           9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQH---STAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLV   85 (284)
T ss_pred             eeeccCCCCceEEEEEecCCcCCCCcEEEEEEecc---CCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEE
Confidence            578999999999999853       1489999875   3345567788999999999999999999987543  468999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +||+++++|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus        86 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~----------------------aL~~LH~~~i~H~dlkp~nili~~  143 (284)
T cd05081          86 MEYLPYGSLRDYLQKHRERLDHRKLLLYASQICK----------------------GMEYLGSKRYVHRDLATRNILVES  143 (284)
T ss_pred             EEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHH----------------------HHHHHHHCCceeccCCHhhEEECC
Confidence            9999999999999865546899999999888777                      788889999999999999998865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       144 ~~  145 (284)
T cd05081         144 EN  145 (284)
T ss_pred             CC
Confidence            43

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.87  E-value=1.6e-21  Score=139.44  Aligned_cols=130  Identities=22%  Similarity=0.221  Sum_probs=108.2

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCC-CCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYL-DDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||++....      .+|+|.+.+... ........+..|+.++..+ .|||++++++++...+.++++|
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (332)
T cd05614           5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLIL   84 (332)
T ss_pred             EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEE
Confidence            5789999999999998632      499999875321 1223455677899999999 5999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+++|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.
T Consensus        85 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivHrDlkp~Nili~~~  141 (332)
T cd05614          85 DYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIIL----------------------ALEHLHKLGIVYRDIKLENILLDSE  141 (332)
T ss_pred             eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcEecCCCHHHeEECCC
Confidence            9999999999998655 6899999999887777                      7888899999999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       142 ~  142 (332)
T cd05614         142 G  142 (332)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.87  E-value=1.2e-21  Score=137.36  Aligned_cols=129  Identities=19%  Similarity=0.178  Sum_probs=106.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+|+|.+.... ........+.+|+.++..++|||++++++++...+.++++|||+++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   84 (287)
T cd07848           6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE-ENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEK   84 (287)
T ss_pred             EEEecccCCEEEEEEEECCCCcEEEEEEEeccc-ccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCC
Confidence            4679999999999999865   49999987643 2334456778899999999999999999999999999999999998


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +.+..+... ...+++..+..++.|++.                      +|.++|+.+++|||+|+.|++....+
T Consensus        85 ~~l~~~~~~-~~~~~~~~~~~~~~qi~~----------------------~L~~lH~~~i~H~dlkp~Nill~~~~  137 (287)
T cd07848          85 NMLELLEEM-PNGVPPEKVRSYIYQLIK----------------------AIHWCHKNDIVHRDIKPENLLISHND  137 (287)
T ss_pred             CHHHHHHhc-CCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            776655443 336889999888887777                      77888888999999999999886543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.87  E-value=3.5e-21  Score=150.32  Aligned_cols=131  Identities=21%  Similarity=0.167  Sum_probs=107.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+...........+.+.+|+.+++.++|||++++++.+...+..+++|||+++
T Consensus         7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eG   86 (932)
T PRK13184          7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEG   86 (932)
T ss_pred             EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCC
Confidence            5789999999999998754   4999999765433445567889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc----------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccc
Q psy697           79 HTLYTNIHIYK----------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLN  148 (157)
Q Consensus        79 g~L~~~i~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~  148 (157)
                      |+|.+++....          ...++..+..++.|++.                      +|+++|+++++|||+|+.|+
T Consensus        87 GSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~----------------------AL~yLHs~GIIHRDLKPeNI  144 (932)
T PRK13184         87 YTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICA----------------------TIEYVHSKGVLHRDLKPDNI  144 (932)
T ss_pred             CCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCchheE
Confidence            99999987421          12344556666666666                      88889999999999999999


Q ss_pred             cccccc
Q psy697          149 LSRSAE  154 (157)
Q Consensus       149 ~~~~~~  154 (157)
                      +....+
T Consensus       145 LLd~dg  150 (932)
T PRK13184        145 LLGLFG  150 (932)
T ss_pred             EEcCCC
Confidence            986544

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=3.9e-21  Score=132.66  Aligned_cols=125  Identities=22%  Similarity=0.311  Sum_probs=104.5

Q ss_pred             CccccCceeeEEEEEEec-------------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCce
Q psy697            3 DRIGKGHFGTVYNGNWHG-------------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHL   69 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-------------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~   69 (157)
                      +.||+|+||.||++.+..             .+++|.+....    .....+.+|+.+++.++|||++++++++.. ...
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence            478999999999999854             15677665431    126778899999999999999999999888 778


Q ss_pred             EEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           70 AIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      ++++||+++|+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~----------------------~l~~LH~~~i~H~dlkp~Nil  133 (259)
T cd05037          76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLAS----------------------ALHYLEDKKLVHGNVCGKNIL  133 (259)
T ss_pred             EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHH----------------------HHHHHhhCCeecccCccceEE
Confidence            9999999999999999875546888888888887777                      888899999999999999999


Q ss_pred             ccccc
Q psy697          150 SRSAE  154 (157)
Q Consensus       150 ~~~~~  154 (157)
                      .....
T Consensus       134 l~~~~  138 (259)
T cd05037         134 VARYG  138 (259)
T ss_pred             EecCc
Confidence            86544

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.86  E-value=2.4e-21  Score=139.68  Aligned_cols=124  Identities=22%  Similarity=0.231  Sum_probs=102.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+|+|.+...  ........+.+|+.++..++|+||+++++++...+.++++|||+++
T Consensus        79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  156 (353)
T PLN00034         79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGN--HEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG  156 (353)
T ss_pred             hhhccCCCCeEEEEEEECCCCCEEEEEEEecC--CcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCC
Confidence            4689999999999999854   5999998654  2344567788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|....     ..++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       157 ~~L~~~~-----~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrDlkp~NIll~~~~  205 (353)
T PLN00034        157 GSLEGTH-----IADEQFLADVARQILS----------------------GIAYLHRRHIVHRDIKPSNLLINSAK  205 (353)
T ss_pred             Ccccccc-----cCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeecCCCHHHEEEcCCC
Confidence            9986532     3456666677776666                      88888999999999999999987654

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.86  E-value=6.8e-21  Score=133.42  Aligned_cols=128  Identities=23%  Similarity=0.339  Sum_probs=107.3

Q ss_pred             CCccccCceeeEEEEEEe-------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH-------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~-------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv   72 (157)
                      .+.||+|+||.||++.+.       ..+++|.+...  ........+.+|+.+++.++|||++++.+++...  ...+++
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (284)
T cd05079           9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI   86 (284)
T ss_pred             ceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc--ccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEE
Confidence            577999999999999752       14999998754  2344566789999999999999999999988775  568999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++++|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus        87 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~----------------------aL~~lH~~gi~H~dlkp~Nil~~~  144 (284)
T cd05079          87 MEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICK----------------------GMDYLGSRQYVHRDLAARNVLVES  144 (284)
T ss_pred             EEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecccchheEEEcC
Confidence            9999999999999765446889999999998777                      777888999999999999998765


Q ss_pred             c
Q psy697          153 A  153 (157)
Q Consensus       153 ~  153 (157)
                      .
T Consensus       145 ~  145 (284)
T cd05079         145 E  145 (284)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.86  E-value=2.7e-21  Score=136.97  Aligned_cols=128  Identities=18%  Similarity=0.227  Sum_probs=106.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+....  .......+.+|+.+++.++|||++++++++...+..+++|||+++
T Consensus        11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   88 (309)
T cd07872          11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK   88 (309)
T ss_pred             EEEecccCCEEEEEEEecCCCCeEEEEEeeccc--cCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC
Confidence            4679999999999998754   49999987543  222334567899999999999999999999999999999999975


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                       +|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        89 -~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------aL~~lH~~~ivH~dlkp~Nill~~~~  141 (309)
T cd07872          89 -DLKQYMDDCGNIMSMHNVKIFLYQILR----------------------GLAYCHRRKVLHRDLKPQNLLINERG  141 (309)
T ss_pred             -CHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEECCCC
Confidence             888888765546888888888887777                      77888888999999999999886543

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.86  E-value=4.8e-21  Score=132.28  Aligned_cols=128  Identities=24%  Similarity=0.372  Sum_probs=107.9

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.+.||+|+||.||++.++.  .+++|.+....    .....+..|+.++..++|||++++++++...+..+++|||+++
T Consensus         8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA----MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             hhhhhccCCCceEEEeEecCCccEEEEEeccCC----CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            35789999999999998755  48999886532    1234577899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++......+++..+..++.|++.                      ++.++|+++++|||+++.|++..+..
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~dl~p~ni~i~~~~  137 (256)
T cd05059          84 GCLLNYLRERKGKLGTEWLLDMCSDVCE----------------------AMEYLESNGFIHRDLAARNCLVGEDN  137 (256)
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccccccHhhEEECCCC
Confidence            9999999875546899999999998887                      77778888999999999998876543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.86  E-value=7.2e-21  Score=132.05  Aligned_cols=128  Identities=21%  Similarity=0.332  Sum_probs=107.6

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+.||+|+||.||+|....   .+++|.+....   ......+.+|+.++.+++|||++++++.+...+..+++|||++
T Consensus        13 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~   89 (267)
T cd06646          13 LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCG   89 (267)
T ss_pred             hhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCC
Confidence            35789999999999999754   48999987532   2334567789999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...+ .+++..+..++.|++.                      +++++|+++++|||+++.|++..+..
T Consensus        90 ~~~L~~~~~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~nill~~~~  143 (267)
T cd06646          90 GGSLQDIYHVTG-PLSELQIAYVCRETLQ----------------------GLAYLHSKGKMHRDIKGANILLTDNG  143 (267)
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCCHHHEEECCCC
Confidence            999999987654 7899999999888777                      77778888999999999998876543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.86  E-value=9.8e-21  Score=130.95  Aligned_cols=125  Identities=21%  Similarity=0.353  Sum_probs=104.8

Q ss_pred             ccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            4 RIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .||+|+||.||+|.+..     .+|+|.+...  ......+.+.+|+.++.+++|||++++++.+. .+..+++|||+++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~   78 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE--NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG   78 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccc--cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence            48999999999998742     3899988764  33455677899999999999999999999875 4568999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++......+++..+..++.|++.                      ++.++|+++++|||+|+.|++....
T Consensus        79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlkp~nil~~~~  131 (257)
T cd05115          79 GPLNKFLSGKKDEITVSNVVELMHQVSM----------------------GMKYLEGKNFVHRDLAARNVLLVNQ  131 (257)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhcCeeecccchheEEEcCC
Confidence            9999999865557899999999998888                      7777888899999999999887543

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.86  E-value=3.4e-21  Score=135.32  Aligned_cols=130  Identities=23%  Similarity=0.230  Sum_probs=111.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+.............+.+|+.+++.++|||++++++.+...+.++++|||+++
T Consensus         6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   85 (290)
T cd05580           6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPG   85 (290)
T ss_pred             EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCC
Confidence            4679999999999999854   5999998764333344567788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|+|+++.|++.....
T Consensus        86 ~~L~~~~~~~~-~l~~~~~~~~~~qil~----------------------~l~~lH~~~i~H~dl~p~nili~~~~  138 (290)
T cd05580          86 GELFSHLRKSG-RFPEPVARFYAAQVVL----------------------ALEYLHSLDIVYRDLKPENLLLDSDG  138 (290)
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEecCCCCHHHEEECCCC
Confidence            99999998765 7899999888887777                      78888889999999999999887643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=9.2e-21  Score=132.40  Aligned_cols=128  Identities=23%  Similarity=0.364  Sum_probs=109.2

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|....       .+++|......  .......+.+|+..+..++|||++++++++.. ...++++|
T Consensus        12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e   88 (279)
T cd05057          12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQ   88 (279)
T ss_pred             cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEe
Confidence            5789999999999998743       37889887652  34556778899999999999999999999887 78899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++......+++..+..++.|++.                      +++++|+++++|||+++.|++.++.+
T Consensus        89 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~LH~~~i~H~di~p~nil~~~~~  146 (279)
T cd05057          89 LMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAK----------------------GMSYLEEKRLVHRDLAARNVLVKTPQ  146 (279)
T ss_pred             cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEecccCcceEEEcCCC
Confidence            99999999999876556899999999998777                      78888889999999999999987643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.86  E-value=1.2e-20  Score=130.94  Aligned_cols=132  Identities=18%  Similarity=0.297  Sum_probs=110.7

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+.||+|+||.||+|....   .+++|.+......+......+.+|+.+++.++|||++++++.+...+..++++||++
T Consensus         6 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   85 (267)
T cd08228           6 IEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELAD   85 (267)
T ss_pred             eeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecC
Confidence            35789999999999999754   599998876443455566778899999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...   ...+++..+..++.|++.                      +++++|+++++|+|+++.|++..+..
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~LH~~~i~H~dl~~~nil~~~~~  143 (267)
T cd08228          86 AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCS----------------------AVEHMHSRRVMHRDIKPANVFITATG  143 (267)
T ss_pred             CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHH----------------------HHHHHhhCCeeCCCCCHHHEEEcCCC
Confidence            99999988642   224788888888887777                      88889999999999999999886543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.86  E-value=1.2e-20  Score=131.12  Aligned_cols=127  Identities=22%  Similarity=0.295  Sum_probs=102.7

Q ss_pred             CccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.||+|+||.||+|....     .+++|.+....  .......+.+|+.++..++|||++++++++......+++|||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP   78 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence            468999999999998643     38899886542  23344568889999999999999999999998889999999999


Q ss_pred             CCCHhHHHhhhc----ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYK----EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|+|.+++...+    ...++..+..++.|++.                      +++++|+++++|||+|+.|++....
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~~i~H~dlkp~nil~~~~  136 (269)
T cd05087          79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIAL----------------------GLLHLHKNNFIHSDLALRNCLLTAD  136 (269)
T ss_pred             CCcHHHHHHHhhhcccccccHHHHHHHHHHHHH----------------------HHHHHHHCCEeccccCcceEEEcCC
Confidence            999999997532    13456666777777777                      7777888899999999999887653

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.86  E-value=1.6e-20  Score=132.08  Aligned_cols=128  Identities=20%  Similarity=0.313  Sum_probs=110.5

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+.||+|+||.||++....   .+++|.+..   .+....+.+..|+..++.++|||++++++.+...+.++++|||++
T Consensus        16 i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   92 (292)
T cd06644          16 IIGELGDGAFGKVYKAKNKETGALAAAKVIET---KSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCP   92 (292)
T ss_pred             hhheecCCCCeEEEEEEECCCCceEEEEEecc---CCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCC
Confidence            35789999999999998855   489999876   345567778899999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++|..++......+++..+..++.|++.                      +++++|+++++|||+++.|++....
T Consensus        93 ~~~l~~~~~~~~~~l~~~~~~~~~~ql~~----------------------~l~~lH~~~i~H~dlkp~Nili~~~  146 (292)
T cd06644          93 GGAVDAIMLELDRGLTEPQIQVICRQMLE----------------------ALQYLHSMKIIHRDLKAGNVLLTLD  146 (292)
T ss_pred             CCcHHHHHHhhcCCCCHHHHHHHHHHHHH----------------------HHHHHhcCCeeecCCCcceEEEcCC
Confidence            99999888765546899999999998887                      7777888899999999999988654

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.86  E-value=1.6e-21  Score=134.58  Aligned_cols=129  Identities=27%  Similarity=0.359  Sum_probs=110.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||++....   .+|+|.+.... ...........|+..+..++|||++++.+.+......+++||++++
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~   82 (260)
T PF00069_consen    4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE-IEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG   82 (260)
T ss_dssp             EEEEEEESSEEEEEEEETTTTEEEEEEEEESTT-HHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred             eEEEEeCCCEEEEEEEECCCCeEEEEEEecccc-ccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence            5789999999999999866   49999998753 2222333445689999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|+++                      +|+++|+++++|+|+|+.|++..+.+
T Consensus        83 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~L~~Lh~~~i~H~dikp~NIl~~~~~  135 (260)
T PF00069_consen   83 GSLQDYLQKNK-PLSEEEILKIAYQILE----------------------ALAYLHSKGIVHRDIKPENILLDENG  135 (260)
T ss_dssp             EBHHHHHHHHS-SBBHHHHHHHHHHHHH----------------------HHHHHHHTTEEESSBSGGGEEESTTS
T ss_pred             ccccccccccc-cccccccccccccccc----------------------cccccccccccccccccccccccccc
Confidence            99999998544 7899999999998887                      88889999999999999999988544

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0579|consensus

Probab=99.86  E-value=1e-22  Score=151.17  Aligned_cols=129  Identities=20%  Similarity=0.280  Sum_probs=112.4

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +..||.|+||+||+|..+.+   .|.|.+..   ........++.|+.++..+.||+|+++++.|...+.+|++.|||.|
T Consensus        37 iGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G  113 (1187)
T KOG0579|consen   37 IGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG  113 (1187)
T ss_pred             HhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence            34689999999999998774   56777765   4567788899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      |-++..+-.-+..+++.++..++.|++.                      +|+++|+++|||||+|++|+|..-.++
T Consensus       114 GAVDaimlEL~r~LtE~QIqvvc~q~ld----------------------ALn~LHs~~iIHRDLKAGNiL~TldGd  168 (1187)
T KOG0579|consen  114 GAVDAIMLELGRVLTEDQIQVVCYQVLD----------------------ALNWLHSQNIIHRDLKAGNILLTLDGD  168 (1187)
T ss_pred             chHhHHHHHhccccchHHHHHHHHHHHH----------------------HHHHHhhcchhhhhccccceEEEecCc
Confidence            9988887776668999999999998877                      788899999999999999999765544

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.86  E-value=7.3e-21  Score=132.01  Aligned_cols=127  Identities=22%  Similarity=0.370  Sum_probs=107.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|...+   .+++|.+...   .......+.+|+.++..++|||++++++.+...+.++++|||+++
T Consensus        14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~   90 (267)
T cd06645          14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLE---PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGG   90 (267)
T ss_pred             HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Confidence            3678999999999998754   5999998764   223345677899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++.++..++.|++.                      +++++|+.+++|+|+++.|++..+..
T Consensus        91 ~~L~~~~~~~~-~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlkp~nili~~~~  143 (267)
T cd06645          91 GSLQDIYHVTG-PLSESQIAYVSRETLQ----------------------GLYYLHSKGKMHRDIKGANILLTDNG  143 (267)
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEECCCC
Confidence            99999987655 7899999999998777                      77778888999999999998876543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.86  E-value=1.1e-20  Score=133.68  Aligned_cols=128  Identities=18%  Similarity=0.307  Sum_probs=105.7

Q ss_pred             CCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..     .+++|.+...  ........+..|+.++.++ +|||++++++++...+.++++|||
T Consensus        12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~   89 (303)
T cd05088          12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY   89 (303)
T ss_pred             eeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEe
Confidence            4679999999999998754     2577766542  2344566788899999999 899999999999999999999999


Q ss_pred             CCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccc
Q psy697           76 CNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILA  140 (157)
Q Consensus        76 ~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~  140 (157)
                      +++++|.+++...+               ..+++..+..++.|++.                      +++++|+++++|
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------al~~LH~~gi~H  147 (303)
T cd05088          90 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR----------------------GMDYLSQKQFIH  147 (303)
T ss_pred             CCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHH----------------------HHHHHHhCCccc
Confidence            99999999997542               14678888888887777                      788888899999


Q ss_pred             cCCCCcccccccc
Q psy697          141 RSPSHPLNLSRSA  153 (157)
Q Consensus       141 rd~k~~~~~~~~~  153 (157)
                      ||+|+.|++..+.
T Consensus       148 ~dlkp~Nili~~~  160 (303)
T cd05088         148 RDLAARNILVGEN  160 (303)
T ss_pred             cccchheEEecCC
Confidence            9999999998654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.86  E-value=1.2e-20  Score=133.74  Aligned_cols=127  Identities=17%  Similarity=0.197  Sum_probs=108.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+++|.+...  ........+.+|+.++..++|||++++++.+...+.++++|||+++
T Consensus         6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~   83 (308)
T cd06615           6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLE--IKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDG   83 (308)
T ss_pred             EeeccCCCCeEEEEEEEcCCCeEEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCC
Confidence            5689999999999998865   3888888654  2345566788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++...+ .+++..+..++.|++.                      ++.++|+ .+++|+|+++.|++....
T Consensus        84 ~~L~~~l~~~~-~~~~~~~~~~~~~i~~----------------------~l~~lH~~~~i~H~dl~p~nil~~~~  136 (308)
T cd06615          84 GSLDQVLKKAG-RIPENILGKISIAVLR----------------------GLTYLREKHKIMHRDVKPSNILVNSR  136 (308)
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhhCCEEECCCChHHEEEecC
Confidence            99999998754 6889988888887777                      7777886 479999999999887653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=1.1e-20  Score=133.05  Aligned_cols=129  Identities=19%  Similarity=0.337  Sum_probs=106.7

Q ss_pred             CCCccccCceeeEEEEEEec-----------------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG-----------------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC   63 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~-----------------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~   63 (157)
                      +.+.||+|+||.||++...+                 .+|+|.+...  ........+.+|+.++.+++|||++++++++
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~   86 (295)
T cd05097           9 LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD--VTKTARNDFLKEIKIMSRLKNPNIIRLLGVC   86 (295)
T ss_pred             ehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC--CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEE
Confidence            35789999999999987632                 2889998764  3345566789999999999999999999999


Q ss_pred             ecCCceEEEEecCCCCCHhHHHhhhc-----------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhc
Q psy697           64 MKPPHLAIVTSKCNGHTLYTNIHIYK-----------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEK  132 (157)
Q Consensus        64 ~~~~~~~lv~e~~~~g~L~~~i~~~~-----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~  132 (157)
                      ...+..+++|||+++++|.+++....           ..+++..+..++.|++.                      ++.+
T Consensus        87 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~----------------------al~~  144 (295)
T cd05097          87 VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIAS----------------------GMKY  144 (295)
T ss_pred             cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHH----------------------HHHH
Confidence            99999999999999999999986532           13577778888887777                      7777


Q ss_pred             cccccccccCCCCcccccccc
Q psy697          133 LPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       133 ~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|+++++|||+|+.|++....
T Consensus       145 lH~~~i~H~dlkp~Nill~~~  165 (295)
T cd05097         145 LASLNFVHRDLATRNCLVGNH  165 (295)
T ss_pred             HHhcCeeccccChhhEEEcCC
Confidence            888899999999999988654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.86  E-value=8.7e-21  Score=134.19  Aligned_cols=130  Identities=17%  Similarity=0.117  Sum_probs=110.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+.............+.+|+.++..++|||++++++.+...+.++++|||+++
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g   85 (305)
T cd05609           6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEG   85 (305)
T ss_pred             eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence            4689999999999999865   4999998764322334456778899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      ++.++|+++++|||+++.|++.....
T Consensus        86 ~~L~~~l~~~~-~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~p~NIll~~~~  138 (305)
T cd05609          86 GDCATLLKNIG-ALPVDMARMYFAETVL----------------------ALEYLHNYGIVHRDLKPDNLLITSMG  138 (305)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCchHHEEECCCC
Confidence            99999998755 7899988888887777                      77788888999999999999887543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.86  E-value=1.6e-20  Score=130.83  Aligned_cols=129  Identities=24%  Similarity=0.357  Sum_probs=108.4

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|..+.        .+++|.+...  ......+.+.+|+.++..++|||++++++++......+++|
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   87 (275)
T cd05046          10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT--KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMIL   87 (275)
T ss_pred             eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc--cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEE
Confidence            4679999999999998642        3888888653  22234667899999999999999999999998888999999


Q ss_pred             ecCCCCCHhHHHhhhc--------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCC
Q psy697           74 SKCNGHTLYTNIHIYK--------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSH  145 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~  145 (157)
                      ||+++|+|.+++...+        ..+++..+..++.|++.                      +|+++|+++++|||+|+
T Consensus        88 e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~----------------------~l~~LH~~~i~H~dlkp  145 (275)
T cd05046          88 EYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIAL----------------------GMDHLSNARFVHRDLAA  145 (275)
T ss_pred             EecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHH----------------------HHHHhhhcCcccCcCcc
Confidence            9999999999997643        14789999999998888                      88889999999999999


Q ss_pred             ccccccccc
Q psy697          146 PLNLSRSAE  154 (157)
Q Consensus       146 ~~~~~~~~~  154 (157)
                      .|++....+
T Consensus       146 ~Nili~~~~  154 (275)
T cd05046         146 RNCLVSSQR  154 (275)
T ss_pred             ceEEEeCCC
Confidence            998886543

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.86  E-value=1.7e-20  Score=129.60  Aligned_cols=126  Identities=21%  Similarity=0.302  Sum_probs=105.3

Q ss_pred             CccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.||+|+||.||+|.++.     .+|+|++.... .+....+.+..|+.++..++|||++++++++. ....+++|||++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~   78 (257)
T cd05116           1 GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAE   78 (257)
T ss_pred             CcCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCC
Confidence            468999999999997632     49999987543 44556778899999999999999999999875 446789999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++|.+++...+ .+++..+..++.|++.                      +++++|+++++|||+|+.|++....
T Consensus        79 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------al~~lH~~~i~H~dlkp~nill~~~  131 (257)
T cd05116          79 LGPLNKFLQKNK-HVTEKNITELVHQVSM----------------------GMKYLEETNFVHRDLAARNVLLVTQ  131 (257)
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeecccchhhEEEcCC
Confidence            999999997654 6899999999887777                      7788888899999999999887653

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.86  E-value=2.2e-20  Score=130.66  Aligned_cols=128  Identities=22%  Similarity=0.314  Sum_probs=109.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+..   ........+.+|+.+++.++|||++++++.+...+..++++||+++
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643          10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDT---KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HhhcccCCCeEEEEEEECCCCeEEEEEEeCC---CCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            4679999999999999865   378888865   3445567788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|..++......+++..+..++.|++.                      +|.++|+.+++|||+++.|++....+
T Consensus        87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~----------------------~L~~LH~~~i~H~dlkp~nili~~~~  140 (282)
T cd06643          87 GAVDAVMLELERPLTEPQIRVVCKQTLE----------------------ALNYLHENKIIHRDLKAGNILFTLDG  140 (282)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCCcccEEEccCC
Confidence            9999988764447899999999998777                      77778888999999999999876543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.86  E-value=2.1e-20  Score=130.54  Aligned_cols=128  Identities=23%  Similarity=0.332  Sum_probs=107.2

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..       ++|+|.+...  ........+.+|...+..++|||++++++.+... ..++++|
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l~~~   88 (279)
T cd05109          12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN--TSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQLVTQ   88 (279)
T ss_pred             eeecCCCCCceEEEEEEecCCCccceEEEEEEecCC--CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEEEEE
Confidence            5789999999999998743       2789998754  3445567788999999999999999999988754 5679999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~L~~lH~~~iiH~dlkp~Nil~~~~~  146 (279)
T cd05109          89 LMPYGCLLDYVRENKDRIGSQDLLNWCVQIAK----------------------GMSYLEEVRLVHRDLAARNVLVKSPN  146 (279)
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccccccceEEEcCCC
Confidence            99999999999875546899999999988877                      77888899999999999999986543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.86  E-value=6.8e-21  Score=138.22  Aligned_cols=129  Identities=20%  Similarity=0.174  Sum_probs=107.3

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC-----ceEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP-----HLAIV   72 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv   72 (157)
                      +.+.||+|+||.||++....   .+|+|.+.... .+......+.+|+.+++.++|||++++++++...+     ..+++
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv   82 (372)
T cd07853           4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVV   82 (372)
T ss_pred             ccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEE
Confidence            36789999999999998743   59999987543 33445567889999999999999999999998766     78999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +||+. ++|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus        83 ~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~----------------------aL~~LH~~~ivH~dlkp~Nili~~  138 (372)
T cd07853          83 TELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILR----------------------GLKYLHSAGILHRDIKPGNLLVNS  138 (372)
T ss_pred             eeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeCCCCChHHEEECC
Confidence            99996 58888886544 7899999999887777                      788888999999999999998865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       139 ~~  140 (372)
T cd07853         139 NC  140 (372)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.86  E-value=1.3e-20  Score=132.20  Aligned_cols=130  Identities=22%  Similarity=0.172  Sum_probs=108.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.............+..|+.++..++|+|++.+++.+...+..+++|||+++
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g   84 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG   84 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCC
Confidence            4679999999999999865   4999998764323333345677899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++...+ ..+++..+..++.|++.                      ++.++|+++++|||+|+.|++..+.
T Consensus        85 ~~L~~~l~~~~~~~l~~~~~~~~~~qi~~----------------------~l~~lH~~~iiH~dikp~Nil~~~~  138 (285)
T cd05630          85 GDLKFHIYHMGEAGFEEGRAVFYAAEICC----------------------GLEDLHQERIVYRDLKPENILLDDH  138 (285)
T ss_pred             CcHHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEeCCCCHHHEEECCC
Confidence            99999886543 25888889888887777                      7778888899999999999887654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.85  E-value=1.2e-20  Score=132.39  Aligned_cols=130  Identities=21%  Similarity=0.139  Sum_probs=108.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.............+.+|+.++..++|+|++.+.+.+...+..+++|||+++
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   84 (285)
T cd05632           5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG   84 (285)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccC
Confidence            3679999999999998854   4999998764322333445677899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+.+...+ ..+++..+..++.|++.                      +++++|+++++|||+|+.|++..+.
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~ql~~----------------------~l~~lH~~~iiH~dikp~Nili~~~  138 (285)
T cd05632          85 GDLKFHIYNMGNPGFEEERALFYAAEILC----------------------GLEDLHRENTVYRDLKPENILLDDY  138 (285)
T ss_pred             ccHHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeecCCCHHHEEECCC
Confidence            99998886543 25899999999998888                      7778888899999999999887654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0033|consensus

Probab=99.85  E-value=5.4e-23  Score=137.16  Aligned_cols=128  Identities=22%  Similarity=0.273  Sum_probs=109.9

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+|+.|+++.+..   .+++|+++...+ .....+.+.+|+++...++||||+++...+...+..|+|+|++.|+
T Consensus        17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~-~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~   95 (355)
T KOG0033|consen   17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG   95 (355)
T ss_pred             HHHccCchHHHHHHHhccchHHHHHHHhhhhhh-ccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccch
Confidence            579999999999998765   489998876653 3346788999999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|..-|-.+. .+++..+...+.||++                      +|+|.|.++|+|||+|+.|++..|++
T Consensus        96 dl~~eIV~R~-~ySEa~aSH~~rQiLe----------------------al~yCH~n~IvHRDvkP~nllLASK~  147 (355)
T KOG0033|consen   96 ELFEDIVARE-FYSEADASHCIQQILE----------------------ALAYCHSNGIVHRDLKPENLLLASKA  147 (355)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHH----------------------HHHHHHhcCceeccCChhheeeeecc
Confidence            9988877654 6888888888887777                      66666777999999999999988876

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.85  E-value=2.1e-20  Score=128.84  Aligned_cols=130  Identities=19%  Similarity=0.215  Sum_probs=111.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+.... ........+.+|+..++.++|||++++++.+...+..+++|||+++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK-MNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAEN   83 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh-CCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCC
Confidence            4679999999999998854   49999987644 3455677889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++... +..+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+..
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~i~~~l~~----------------------al~~lH~~~i~h~dl~~~nili~~~~  138 (256)
T cd08529          84 GDLHKLLKMQRGRPLPEDQVWRFFIQILL----------------------GLAHLHSKKILHRDIKSLNLFLDAYD  138 (256)
T ss_pred             CcHHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCcceEEEeCCC
Confidence            9999999874 346888889999887777                      77888889999999999999877643

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.85  E-value=9.5e-21  Score=133.72  Aligned_cols=128  Identities=19%  Similarity=0.238  Sum_probs=106.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+....  .......+.+|+..+..++||||+++++++...+..+++|||++ 
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-   87 (301)
T cd07873          11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-   87 (301)
T ss_pred             eeEeccCcCEEEEEEEEcCCCcEEEEEEEeccc--ccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-
Confidence            4679999999999998754   49999987542  22234456789999999999999999999999999999999997 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+..+++..+..++.|+++                      +|+++|+++++|+|+|+.|++..+..
T Consensus        88 ~~l~~~l~~~~~~~~~~~~~~~~~qi~~----------------------aL~~lH~~~i~H~dlkp~Nil~~~~~  141 (301)
T cd07873          88 KDLKQYLDDCGNSINMHNVKLFLFQLLR----------------------GLNYCHRRKVLHRDLKPQNLLINERG  141 (301)
T ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeCCCCCHHHEEECCCC
Confidence            5899988775556888888888887777                      77788888999999999999887654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.85  E-value=2.6e-20  Score=130.77  Aligned_cols=129  Identities=22%  Similarity=0.329  Sum_probs=108.4

Q ss_pred             CCCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   72 (157)
                      +.+.+|+|+||.||++....        .+++|.+..   ........+.+|+.++.+++|||++++++++...+.++++
T Consensus         9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (288)
T cd05093           9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV   85 (288)
T ss_pred             eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCC---cCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            35789999999999997522        378888865   3345567789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhc------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccc
Q psy697           73 TSKCNGHTLYTNIHIYK------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILA  140 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~  140 (157)
                      +||+++++|.+++...+            ..+++.++..++.|++.                      +|+++|+++++|
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~----------------------aL~~lH~~~i~H  143 (288)
T cd05093          86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAA----------------------GMVYLASQHFVH  143 (288)
T ss_pred             EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeee
Confidence            99999999999997532            13888999999987777                      777888889999


Q ss_pred             cCCCCccccccccc
Q psy697          141 RSPSHPLNLSRSAE  154 (157)
Q Consensus       141 rd~k~~~~~~~~~~  154 (157)
                      ||+|+.|++..+..
T Consensus       144 ~dlkp~Nili~~~~  157 (288)
T cd05093         144 RDLATRNCLVGENL  157 (288)
T ss_pred             cccCcceEEEccCC
Confidence            99999999886544

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.85  E-value=2.6e-20  Score=129.33  Aligned_cols=128  Identities=22%  Similarity=0.267  Sum_probs=109.2

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|....      .+++|.+...  ......+.+..|+.++.+++|||++++.+++...+..+++|||
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (268)
T cd05063          10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPG--YTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY   87 (268)
T ss_pred             eeEecCCCCccEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence            4679999999999998753      3889988654  2344567788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++++|.+++......+++..+..++.|++.                      +++++|+++++|||+|+.|++..+.
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~----------------------al~~lH~~~i~H~dlkp~Nili~~~  143 (268)
T cd05063          88 MENGALDKYLRDHDGEFSSYQLVGMLRGIAA----------------------GMKYLSDMNYVHRDLAARNILVNSN  143 (268)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccccchhhEEEcCC
Confidence            9999999999875557899999999887777                      7777888899999999999887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG4257|consensus

Probab=99.85  E-value=4e-21  Score=142.24  Aligned_cols=128  Identities=27%  Similarity=0.382  Sum_probs=113.2

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||.|.||.||.|.+..       .||||.-+..  .++++.+.|..|..+|+++.||||++++|.+... ..||+||
T Consensus       394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d--~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmE  470 (974)
T KOG4257|consen  394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD--CTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVME  470 (974)
T ss_pred             HHhhcCCcccceeeeEecccccCcceeeeeehhccC--CChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEe
Confidence            4679999999999999844       2899988765  4567799999999999999999999999998765 5799999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++-|.|..+++.++..++......++.|++.                      +|.|+++++++|||+.+.|+|+.|-+
T Consensus       471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~t----------------------alaYLeSkrfVHRDIAaRNiLVsSp~  528 (974)
T KOG4257|consen  471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICT----------------------ALAYLESKRFVHRDIAARNILVSSPQ  528 (974)
T ss_pred             cccchhHHHHHHhccccchHHHHHHHHHHHHH----------------------HHHHHHhhchhhhhhhhhheeecCcc
Confidence            99999999999998878999999999998888                      77788999999999999999988764

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.85  E-value=2e-20  Score=130.94  Aligned_cols=129  Identities=18%  Similarity=0.293  Sum_probs=106.1

Q ss_pred             CCccccCceeeEEEEEEe-------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWH-------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~-------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|...       ..+++|.+...  ........+.+|+.+++.++|||++++++++......+++||
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   87 (283)
T cd05090          10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFE   87 (283)
T ss_pred             eeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEE
Confidence            578999999999999852       14899998754  334455678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhc----------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccc
Q psy697           75 KCNGHTLYTNIHIYK----------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRI  138 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~----------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~  138 (157)
                      |+++++|.+++....                ..+++.++..++.|++.                      +|.++|++++
T Consensus        88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~----------------------al~~lH~~~i  145 (283)
T cd05090          88 YLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAA----------------------GMEYLSSHFF  145 (283)
T ss_pred             cCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHH----------------------HHHHHHhcCe
Confidence            999999999986321                13677777778776666                      8888999999


Q ss_pred             cccCCCCccccccccc
Q psy697          139 LARSPSHPLNLSRSAE  154 (157)
Q Consensus       139 ~~rd~k~~~~~~~~~~  154 (157)
                      +|||+|+.|++..+..
T Consensus       146 ~H~dlkp~nili~~~~  161 (283)
T cd05090         146 VHKDLAARNILIGEQL  161 (283)
T ss_pred             ehhccccceEEEcCCC
Confidence            9999999999987653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG1094|consensus

Probab=99.85  E-value=2.7e-21  Score=141.96  Aligned_cols=127  Identities=22%  Similarity=0.343  Sum_probs=107.6

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.++||+|.||.|.+|+..+  .||+|.++..  .....+..|.+|+.+|.+++||||+.+.|.|..++.+.+++||++.
T Consensus       542 ~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~--a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn  619 (807)
T KOG1094|consen  542 FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPD--ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN  619 (807)
T ss_pred             hhhhhcCcccceeEEEEecCceEEEEeecCcc--cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence            46899999999999999877  4999999875  3334468999999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhccc-CCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           79 HTLYTNIHIYKEK-FALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        79 g~L~~~i~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      |+|.+++..+..+ ........++.||+.                      +++|+-+-+++|||+...|.|..
T Consensus       620 GDLnqFl~aheapt~~t~~~vsi~tqias----------------------gmaYLes~nfVHrd~a~rNcLv~  671 (807)
T KOG1094|consen  620 GDLNQFLSAHELPTAETAPGVSICTQIAS----------------------GMAYLESLNFVHRDLATRNCLVD  671 (807)
T ss_pred             CcHHHHHHhccCcccccchhHHHHHHHHH----------------------HHHHHHhhchhhccccccceeec
Confidence            9999999987533 245566678888777                      77777777888888888887764

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.85  E-value=2.8e-20  Score=129.36  Aligned_cols=130  Identities=19%  Similarity=0.357  Sum_probs=105.4

Q ss_pred             CCCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------Cce
Q psy697            1 MGDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHL   69 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~   69 (157)
                      +++.||+|+||.||+|....     .+|+|.++... ......+.+..|..++..++|||++++++.+...      ...
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            46899999999999998754     38899887643 3445567888999999999999999999877432      357


Q ss_pred             EEEEecCCCCCHhHHHhhh-----cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           70 AIVTSKCNGHTLYTNIHIY-----KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                      ++++||+++|+|.+++...     ...+++..+..++.|++.                      +++++|+++++|||+|
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlk  139 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIAS----------------------GMEYLSSKSFIHRDLA  139 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccccc
Confidence            8999999999999887532     124788888888887777                      8888888899999999


Q ss_pred             Ccccccccc
Q psy697          145 HPLNLSRSA  153 (157)
Q Consensus       145 ~~~~~~~~~  153 (157)
                      +.|++..+.
T Consensus       140 p~Nil~~~~  148 (272)
T cd05075         140 ARNCMLNEN  148 (272)
T ss_pred             hhheEEcCC
Confidence            999988654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0662|consensus

Probab=99.85  E-value=1.9e-21  Score=124.69  Aligned_cols=129  Identities=20%  Similarity=0.276  Sum_probs=109.2

Q ss_pred             CccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ++||+|+||+|++++..++   +|+|.+.... ++........+|+-+++.++|.||+++++...+...+.+|+|||.. 
T Consensus         8 ekigegtygtvfkarn~~t~eivalkrvrldd-ddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq-   85 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-   85 (292)
T ss_pred             HhhcCCcceeeEecccCCccceEEEEEEeccC-CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH-
Confidence            6799999999999987663   9999998765 4445566788999999999999999999999999999999999954 


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      +|..+...-.+.++...+..++.|+.+                      +|...|+.+++|||+|++|.+....+.
T Consensus        86 dlkkyfdslng~~d~~~~rsfmlqllr----------------------gl~fchshnvlhrdlkpqnllin~nge  139 (292)
T KOG0662|consen   86 DLKKYFDSLNGDLDPEIVRSFMLQLLR----------------------GLGFCHSHNVLHRDLKPQNLLINRNGE  139 (292)
T ss_pred             HHHHHHHhcCCcCCHHHHHHHHHHHHh----------------------hhhhhhhhhhhhccCCcceEEeccCCc
Confidence            888888776668999999999998777                      666777778899999999988766543

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.85  E-value=2.9e-20  Score=129.24  Aligned_cols=127  Identities=20%  Similarity=0.286  Sum_probs=101.8

Q ss_pred             CccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.||+|+||.||++....     .+++|.+...  ........+.+|+..+..++|||++++++.+......+++|||++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   78 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKAN--ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE   78 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCC--CChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence            469999999999997543     2556666543  223456788899999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|+|.+++....   ...++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~----------------------al~~lH~~~i~H~dikp~nil~~~~  135 (268)
T cd05086          79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAA----------------------GVTHMHKHNFLHSDLALRNCFLTSD  135 (268)
T ss_pred             CCcHHHHHHhhhcccccccHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCccceEEEcCC
Confidence            999999997642   13455566777777766                      7788888899999999999988654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0577|consensus

Probab=99.85  E-value=8.5e-22  Score=145.08  Aligned_cols=129  Identities=20%  Similarity=0.279  Sum_probs=112.3

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||.|+||.||-|+...   .||+|.++-..-...+.++..+.|+.-+.++.|||++.+.|||......|+|||||- |
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-G  110 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-G  110 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-c
Confidence            468999999999999865   499999986654556678899999999999999999999999999999999999995 5


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +..+++.-.+.++.+..+..++.+.+.                      +|.|+|+.+.||||+|++|+|..+-+
T Consensus       111 SAsDlleVhkKplqEvEIAAi~~gaL~----------------------gLaYLHS~~~IHRDiKAGNILLse~g  163 (948)
T KOG0577|consen  111 SASDLLEVHKKPLQEVEIAAITHGALQ----------------------GLAYLHSHNRIHRDIKAGNILLSEPG  163 (948)
T ss_pred             cHHHHHHHHhccchHHHHHHHHHHHHH----------------------HHHHHHHhhHHhhhccccceEecCCC
Confidence            778887766658899999999887777                      88999999999999999999987654

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.85  E-value=2.4e-20  Score=132.01  Aligned_cols=129  Identities=23%  Similarity=0.418  Sum_probs=106.5

Q ss_pred             CCCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCce
Q psy697            1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHL   69 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~   69 (157)
                      +++.||+|+||.||++...+          .+|+|.+...  ........+..|+.++..+ +|||++++++++...+..
T Consensus        22 i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   99 (307)
T cd05098          22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL   99 (307)
T ss_pred             EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC--CChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence            35789999999999998632          3899998764  2234456788899999999 899999999999999999


Q ss_pred             EEEEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697           70 AIVTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      +++|||+++|+|.+++...+               ..+++..+..++.|++.                      +|+++|
T Consensus       100 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------aL~~lH  157 (307)
T cd05098         100 YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVAR----------------------GMEYLA  157 (307)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHH----------------------HHHHHH
Confidence            99999999999999997642               14778888888887777                      788888


Q ss_pred             cccccccCCCCcccccccc
Q psy697          135 KKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       135 ~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++++|||+|+.|++....
T Consensus       158 ~~gi~H~dlkp~Nill~~~  176 (307)
T cd05098         158 SKKCIHRDLAARNVLVTED  176 (307)
T ss_pred             HCCcccccccHHheEEcCC
Confidence            8899999999999887643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.85  E-value=1.3e-20  Score=130.33  Aligned_cols=127  Identities=21%  Similarity=0.403  Sum_probs=109.2

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|....  .+++|.+...   .......+..|+.++..++|||++++++++......+++|||++++
T Consensus        11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (261)
T cd05148          11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSD---DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKG   87 (261)
T ss_pred             hhhhccCCCccEEEeEecCCCcEEEEecccc---chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccC
Confidence            5789999999999999865  5899998763   3344667889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.+++.... ..+++..+..++.|++.                      ++.++|+++++|+|+++.|++....
T Consensus        88 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------al~~lH~~~i~h~dl~~~nilv~~~  140 (261)
T cd05148          88 SLLAFLRSPEGQVLPVASLIDMACQVAE----------------------GMAYLEEQNSIHRDLAARNILVGED  140 (261)
T ss_pred             CHHHHHhcCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccccCcceEEEcCC
Confidence            9999998643 35888888888887777                      8888899999999999999888654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.85  E-value=3.4e-20  Score=129.45  Aligned_cols=128  Identities=21%  Similarity=0.331  Sum_probs=108.1

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|++|.||+|.+..        .+++|.++..  ........+..|+.+++.++|+|++++++++......+++|
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   88 (277)
T cd05036          11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILL   88 (277)
T ss_pred             eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEE
Confidence            5789999999999999854        3888887653  33444567888999999999999999999999888899999


Q ss_pred             ecCCCCCHhHHHhhhc------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           74 SKCNGHTLYTNIHIYK------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ||+++++|.+++...+      ..+++..+..++.|++.                      +++++|+++++|||+++.|
T Consensus        89 e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~LH~~~ivH~dlkp~n  146 (277)
T cd05036          89 ELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAK----------------------GCKYLEENHFIHRDIAARN  146 (277)
T ss_pred             ecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeecccchhe
Confidence            9999999999997643      14788888888887777                      7888889999999999999


Q ss_pred             cccccc
Q psy697          148 NLSRSA  153 (157)
Q Consensus       148 ~~~~~~  153 (157)
                      ++..+.
T Consensus       147 il~~~~  152 (277)
T cd05036         147 CLLTCK  152 (277)
T ss_pred             EEEecc
Confidence            998754

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.85  E-value=3.9e-20  Score=128.56  Aligned_cols=130  Identities=22%  Similarity=0.380  Sum_probs=106.7

Q ss_pred             CCCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc------
Q psy697            1 MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH------   68 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------   68 (157)
                      +++.||+|+||.||+|....      .+|+|.+.... ........+.+|+..++.++|||++++++.+.....      
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            46889999999999998743      39999987643 334456678899999999999999999998866543      


Q ss_pred             eEEEEecCCCCCHhHHHhhhc-----ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCC
Q psy697           69 LAIVTSKCNGHTLYTNIHIYK-----EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP  143 (157)
Q Consensus        69 ~~lv~e~~~~g~L~~~i~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~  143 (157)
                      .++++||+++|+|..++....     ..+++..+..++.|++.                      +|+++|+++++|||+
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------aL~~lH~~~i~H~dl  139 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIAL----------------------GMEYLSNRNFIHRDL  139 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecccc
Confidence            799999999999999985432     25788888888887777                      788888889999999


Q ss_pred             CCcccccccc
Q psy697          144 SHPLNLSRSA  153 (157)
Q Consensus       144 k~~~~~~~~~  153 (157)
                      |+.|++..+.
T Consensus       140 kp~Nil~~~~  149 (273)
T cd05035         140 AARNCMLRED  149 (273)
T ss_pred             chheEEECCC
Confidence            9999988764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.85  E-value=4e-20  Score=129.79  Aligned_cols=129  Identities=19%  Similarity=0.282  Sum_probs=103.8

Q ss_pred             CCCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   72 (157)
                      +.+.||+|+||.||+|..+.        .+|+|.+...  ........+.+|+..++.++|||++++++.+......+++
T Consensus        10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   87 (288)
T cd05061          10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--ASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV   87 (288)
T ss_pred             eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCc--CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEE
Confidence            35789999999999997642        4899988654  2334455678899999999999999999999988899999


Q ss_pred             EecCCCCCHhHHHhhhc---------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCC
Q psy697           73 TSKCNGHTLYTNIHIYK---------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP  143 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~  143 (157)
                      |||+++|+|.++++..+         ..+++..+..++.|++.                      ++.++|+++++|||+
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lH~~~i~H~di  145 (288)
T cd05061          88 MELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD----------------------GMAYLNAKKFVHRDL  145 (288)
T ss_pred             EeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCCcCCCC
Confidence            99999999999997532         12345667777777666                      777788889999999


Q ss_pred             CCcccccccc
Q psy697          144 SHPLNLSRSA  153 (157)
Q Consensus       144 k~~~~~~~~~  153 (157)
                      |+.|++..+.
T Consensus       146 kp~nili~~~  155 (288)
T cd05061         146 AARNCMVAHD  155 (288)
T ss_pred             ChheEEEcCC
Confidence            9999887654

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.85  E-value=2.7e-20  Score=131.65  Aligned_cols=128  Identities=24%  Similarity=0.366  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   72 (157)
                      .+.||+|+||.||++....        .+|+|.+...  ......+.+.+|+.+++++ +|||++++++++...+..+++
T Consensus        40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv  117 (302)
T cd05055          40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPT--AHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVI  117 (302)
T ss_pred             cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCcc--CChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEE
Confidence            5789999999999997521        4899988764  2344566788999999999 899999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           73 TSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      |||+++|+|.++++... ..+++.++..++.|++.                      +++++|+++++|+|+|+.|++..
T Consensus       118 ~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~----------------------~l~~lH~~~ivH~dlkp~Nil~~  175 (302)
T cd05055         118 TEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK----------------------GMAFLASKNCIHRDLAARNVLLT  175 (302)
T ss_pred             EEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeehhhhccceEEEc
Confidence            99999999999997643 23899999999998777                      78888999999999999998886


Q ss_pred             cc
Q psy697          152 SA  153 (157)
Q Consensus       152 ~~  153 (157)
                      ..
T Consensus       176 ~~  177 (302)
T cd05055         176 HG  177 (302)
T ss_pred             CC
Confidence            43

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.85  E-value=1.5e-20  Score=130.37  Aligned_cols=131  Identities=20%  Similarity=0.287  Sum_probs=109.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+......+......+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus         7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~   86 (267)
T cd08229           7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA   86 (267)
T ss_pred             hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCC
Confidence            4679999999999999743   5999988764434445567888999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...   ...+++..+..++.|++.                      ++.++|+++++|+|+++.|++....+
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~LH~~~i~H~dl~p~nili~~~~  143 (267)
T cd08229          87 GDLSRMIKHFKKQKRLIPEKTVWKYFVQLCS----------------------ALEHMHSRRVMHRDIKPANVFITATG  143 (267)
T ss_pred             CCHHHHHHHhhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            9999998742   235788999989887777                      78888999999999999998876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.85  E-value=3.7e-20  Score=128.81  Aligned_cols=127  Identities=18%  Similarity=0.312  Sum_probs=105.8

Q ss_pred             CccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecC
Q psy697            3 DRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +.||+|+||.||++....     .+++|.+...  ......+.+.+|+.++.++ +|||++++++++...+.++++|||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   78 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence            468999999999998754     2678877643  3345566788999999999 8999999999999999999999999


Q ss_pred             CCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccccccc
Q psy697           77 NGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILAR  141 (157)
Q Consensus        77 ~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~r  141 (157)
                      ++|+|.+++...+               ..+++.++..++.|++.                      +++++|+++++||
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~----------------------al~~lH~~~i~H~  136 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR----------------------GMDYLSQKQFIHR  136 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeec
Confidence            9999999997532               13678888888887777                      7778888899999


Q ss_pred             CCCCcccccccc
Q psy697          142 SPSHPLNLSRSA  153 (157)
Q Consensus       142 d~k~~~~~~~~~  153 (157)
                      |+|+.|++..+.
T Consensus       137 dikp~nili~~~  148 (270)
T cd05047         137 DLAARNILVGEN  148 (270)
T ss_pred             ccccceEEEcCC
Confidence            999999988654

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.85  E-value=3.4e-20  Score=128.76  Aligned_cols=125  Identities=19%  Similarity=0.268  Sum_probs=105.5

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ..||+|+||.||++...+   .+++|.+...   .....+.+.+|+.++..++|+|++++++++...+..++++||++++
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   90 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGG   90 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCC
Confidence            368999999999998755   4899988763   3445678889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccC--CHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           80 TLYTNIHIYKEKF--ALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        80 ~L~~~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +|.+++......+  ++..+..++.|++.                      ++.++|+++++|||+++.|++...
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~~i~h~dl~p~nil~~~  143 (268)
T cd06624          91 SLSALLRSKWGPLKDNEQTIIFYTKQILE----------------------GLKYLHDNQIVHRDIKGDNVLVNT  143 (268)
T ss_pred             CHHHHHHHhcccCCCcHHHHHHHHHHHHH----------------------HHHHHHHCCEeecCCCHHHEEEcC
Confidence            9999998653345  77777778877777                      777788889999999999988854

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.85  E-value=3.9e-20  Score=127.55  Aligned_cols=127  Identities=28%  Similarity=0.454  Sum_probs=110.3

Q ss_pred             CccccCceeeEEEEEEe-----c-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            3 DRIGKGHFGTVYNGNWH-----G-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~-----~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +.||+|+||.||++...     . .+++|.+....  .....+.+..|+..+..++|+|++++++++.....++++|||+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA--SEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeecccc--chhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence            47999999999999885     2 49999998753  2224678889999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhh--------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccc
Q psy697           77 NGHTLYTNIHIY--------KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLN  148 (157)
Q Consensus        77 ~~g~L~~~i~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~  148 (157)
                      ++++|.+++...        ...+++..+..++.|++.                      +++++|+++++|+|+++.|+
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------al~~lH~~~i~H~di~p~ni  136 (262)
T cd00192          79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAK----------------------GMEYLASKKFVHRDLAARNC  136 (262)
T ss_pred             cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHH----------------------HHHHHHcCCcccCccCcceE
Confidence            999999999875        347899999999998887                      77778889999999999999


Q ss_pred             ccccc
Q psy697          149 LSRSA  153 (157)
Q Consensus       149 ~~~~~  153 (157)
                      +..+.
T Consensus       137 li~~~  141 (262)
T cd00192         137 LVGED  141 (262)
T ss_pred             EECCC
Confidence            88764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.85  E-value=3.2e-20  Score=130.35  Aligned_cols=130  Identities=18%  Similarity=0.340  Sum_probs=107.0

Q ss_pred             CCCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   72 (157)
                      +.+.||+|+||.||+|....        .+++|.+...  ........+.+|+..+..++||||+++++.+...+..+++
T Consensus         4 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN--ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC--CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            35789999999999998642        3788888654  2334456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhc-----------------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q psy697           73 TSKCNGHTLYTNIHIYK-----------------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKS  129 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~-----------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~  129 (157)
                      +||+.+++|.+++....                       ..+++..+..++.|++.                      +
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~----------------------~  139 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISR----------------------G  139 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHH----------------------H
Confidence            99999999999986421                       13677788888887777                      7


Q ss_pred             HhccccccccccCCCCccccccccc
Q psy697          130 LEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       130 l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++++|+.+++|||+++.|++..+..
T Consensus       140 l~~LH~~~ivH~dikp~nill~~~~  164 (290)
T cd05045         140 MQYLAEMKLVHRDLAARNVLVAEGR  164 (290)
T ss_pred             HHHHHHCCeehhhhhhheEEEcCCC
Confidence            8888888999999999999886544

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.85  E-value=3.8e-20  Score=127.66  Aligned_cols=130  Identities=22%  Similarity=0.172  Sum_probs=110.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.|+.+....   .+++|.+.... .+......+.+|+.++++++|+|++++++++...+.++++|||+++
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~   83 (256)
T cd08221           5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTR-LSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANG   83 (256)
T ss_pred             eeEecccCCceEEEEEEcCCCcEEEEEEEeecc-cchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCC
Confidence            5789999999999988754   48999887654 3345567788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++... +..+++..+..++.|++.                      ++.++|+.+++|+|+++.|++.....
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lh~~~i~h~dl~p~ni~~~~~~  138 (256)
T cd08221          84 GTLYDKIVRQKGQLFEEEMVLWYLFQIVS----------------------AVSYIHKAGILHRDIKTLNIFLTKAG  138 (256)
T ss_pred             CcHHHHHHhccccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccccCCChHhEEEeCCC
Confidence            9999999865 335888999999887777                      77888888999999999998876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.85  E-value=3.5e-20  Score=129.62  Aligned_cols=130  Identities=22%  Similarity=0.354  Sum_probs=108.3

Q ss_pred             CCCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv   72 (157)
                      +.+.||+|+||.||+|....        .+++|.+...  ........+.+|+..+..++|||++++++++......+++
T Consensus         9 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~--~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   86 (283)
T cd05048           9 FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN--AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCML   86 (283)
T ss_pred             hhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC--CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEE
Confidence            35789999999999998633        3889988654  3345566788999999999999999999999988999999


Q ss_pred             EecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697           73 TSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      +||+++++|.+++....               ..+++..+..++.|++.                      ++.++|+++
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~----------------------al~~lH~~~  144 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAA----------------------GMEYLSSHH  144 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCC
Confidence            99999999999997631               24677788888887777                      888889999


Q ss_pred             ccccCCCCccccccccc
Q psy697          138 ILARSPSHPLNLSRSAE  154 (157)
Q Consensus       138 ~~~rd~k~~~~~~~~~~  154 (157)
                      ++|+|+|+.|++..+..
T Consensus       145 i~H~dlkp~Nil~~~~~  161 (283)
T cd05048         145 FVHRDLAARNCLVGEGL  161 (283)
T ss_pred             eeccccccceEEEcCCC
Confidence            99999999999886643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.85  E-value=4.6e-20  Score=129.78  Aligned_cols=129  Identities=22%  Similarity=0.338  Sum_probs=109.0

Q ss_pred             CCCccccCceeeEEEEEEec-------------------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeee
Q psy697            1 MGDRIGKGHFGTVYNGNWHG-------------------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG   61 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~-------------------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~   61 (157)
                      +.+.||+|+||.||++....                   .+++|.+...  ........+.+|+.++..++|||++++++
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~   86 (296)
T cd05051           9 FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPD--ASDNAREDFLKEVKILSRLSDPNIARLLG   86 (296)
T ss_pred             ccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCc--cCHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            46789999999999987642                   2789988764  23455678889999999999999999999


Q ss_pred             EEecCCceEEEEecCCCCCHhHHHhhhc----------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHh
Q psy697           62 ACMKPPHLAIVTSKCNGHTLYTNIHIYK----------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLE  131 (157)
Q Consensus        62 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~  131 (157)
                      ++...+..++++||+++++|.+++....          ..+++..+..++.|++.                      ++.
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------al~  144 (296)
T cd05051          87 VCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIAS----------------------GMR  144 (296)
T ss_pred             EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHH----------------------HHH
Confidence            9999899999999999999999997643          14788899999998777                      777


Q ss_pred             ccccccccccCCCCcccccccc
Q psy697          132 KLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       132 ~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|+++++|||+|+.|++....
T Consensus       145 ~LH~~~i~H~dlkp~Nili~~~  166 (296)
T cd05051         145 YLESLNFVHRDLATRNCLVGKN  166 (296)
T ss_pred             HHHHcCccccccchhceeecCC
Confidence            7888899999999999887654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.85  E-value=3.2e-20  Score=129.83  Aligned_cols=128  Identities=21%  Similarity=0.330  Sum_probs=104.0

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..       .+++|.+...  ........+..|+..+..++|||++++++++.. ...++++|
T Consensus        12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e   88 (279)
T cd05111          12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQ   88 (279)
T ss_pred             ccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEE
Confidence            5789999999999998733       3677777543  223344567788888899999999999998754 45788999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++......+++..+..++.|++.                      +++++|+++++|||+|+.|++.....
T Consensus        89 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~iiH~dlkp~nili~~~~  146 (279)
T cd05111          89 LSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAK----------------------GMYYLEEHRMVHRNLAARNILLKSDS  146 (279)
T ss_pred             eCCCCcHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeccccCcceEEEcCCC
Confidence            99999999999875557899999999998887                      77788888999999999999886543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.85  E-value=4.2e-20  Score=129.32  Aligned_cols=126  Identities=23%  Similarity=0.313  Sum_probs=104.8

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv   72 (157)
                      .+.||+|+||.||++.+..       .+|+|.+...  ........+.+|+.+++.++|||++++++++...  ..++++
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRE--CGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             ceecccCCCcEEEEeeEccccCCCCceEEEEEeccc--cChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            5789999999998876421       4899998764  2234566788999999999999999999987653  458999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++++|.+++...  .+++.++..++.|++.                      +++++|+++++|||+|+.|++..+
T Consensus        87 ~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~----------------------~l~~lH~~~i~H~dlkp~Nili~~  142 (283)
T cd05080          87 MEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICE----------------------GMAYLHSQHYIHRDLAARNVLLDN  142 (283)
T ss_pred             ecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccccChheEEEcC
Confidence            9999999999999754  5899999999997777                      888899999999999999998865


Q ss_pred             c
Q psy697          153 A  153 (157)
Q Consensus       153 ~  153 (157)
                      .
T Consensus       143 ~  143 (283)
T cd05080         143 D  143 (283)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=1.7e-20  Score=129.78  Aligned_cols=127  Identities=22%  Similarity=0.336  Sum_probs=108.3

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|++|.||+|...+  .+++|.+....    ...+.+.+|+.++.+++|||++++++++...+..+++|||++++
T Consensus        11 ~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   86 (261)
T cd05068          11 LRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT----MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYG   86 (261)
T ss_pred             EEEecccCCccEEEEEecCCeEEEEEeeCCCc----ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCC
Confidence            5789999999999998755  49999987542    23456888999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++.... ..+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+.+
T Consensus        87 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~~~  140 (261)
T cd05068          87 SLLEYLQGGAGRALKLPQLIDMAAQVAS----------------------GMAYLEAQNYIHRDLAARNVLVGENN  140 (261)
T ss_pred             cHHHHHhccCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeccCCcceEEEcCCC
Confidence            9999997643 35889999888887777                      78888999999999999999887654

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=1e-20  Score=138.14  Aligned_cols=120  Identities=13%  Similarity=0.190  Sum_probs=102.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|....         ..+.+|+.+++.++||||+++++++......++++|++. 
T Consensus        97 ~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-  166 (391)
T PHA03212         97 LETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-  166 (391)
T ss_pred             EEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-
Confidence            4679999999999999855   489986532         235789999999999999999999999999999999995 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|..++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus       167 ~~L~~~l~~~~-~l~~~~~~~i~~qi~~----------------------aL~ylH~~~IvHrDiKP~NIll~~~~  219 (391)
T PHA03212        167 TDLYCYLAAKR-NIAICDILAIERSVLR----------------------AIQYLHENRIIHRDIKAENIFINHPG  219 (391)
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCChHhEEEcCCC
Confidence            68988887654 6889999888887777                      88889999999999999999986654

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.85  E-value=3.1e-20  Score=129.09  Aligned_cols=128  Identities=27%  Similarity=0.343  Sum_probs=107.5

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..      .+++|.....  .+....+.+.+|+.++..++|||++++++.+.. ...+++|||
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~   87 (270)
T cd05056          11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC--TSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMEL   87 (270)
T ss_pred             eeeeCCccceeEEEEEEecCCCCCcceEEEecCCc--CCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEc
Confidence            4689999999999998743      3888988654  234566788999999999999999999998765 457899999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.+++......+++..+..++.|++.                      +++++|+.+++|+|+++.|++..+..
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lH~~~~~H~dl~p~nili~~~~  144 (270)
T cd05056          88 APLGELRSYLQVNKYSLDLASLILYSYQLST----------------------ALAYLESKRFVHRDIAARNVLVSSPD  144 (270)
T ss_pred             CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccccChheEEEecCC
Confidence            9999999999875546899999999887777                      88889999999999999999887644

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=3.8e-20  Score=127.72  Aligned_cols=127  Identities=28%  Similarity=0.386  Sum_probs=109.9

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      .+.||+|+||.||++...+ .+++|.+....    ...+.+.+|+.++..++|+|++++++.+......+++|||+++++
T Consensus        11 ~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   86 (256)
T cd05039          11 GATIGKGEFGDVMLGDYRGQKVAVKCLKDDS----TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGS   86 (256)
T ss_pred             eeeeecCCCceEEEEEecCcEEEEEEeccch----hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCc
Confidence            5789999999999998866 59999997642    256778899999999999999999999998899999999999999


Q ss_pred             HhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           81 LYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        81 L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |.++++... ..+++..+..++.|++.                      ++.++|+++++|+|+++.|++....+
T Consensus        87 L~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lh~~~i~H~di~p~Nili~~~~  139 (256)
T cd05039          87 LVDYLRSRGRAVITLAQQLGFALDVCE----------------------GMEYLEEKNFVHRDLAARNVLVSEDL  139 (256)
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccchhcccceEEEeCCC
Confidence            999998643 25899999999998777                      77788999999999999999886543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.85  E-value=3.2e-20  Score=130.76  Aligned_cols=129  Identities=19%  Similarity=0.324  Sum_probs=105.8

Q ss_pred             CCCccccCceeeEEEEEEec-------------------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeee
Q psy697            1 MGDRIGKGHFGTVYNGNWHG-------------------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG   61 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~-------------------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~   61 (157)
                      +.+.||+|+||.||++....                   .+|+|.+...  ........+..|+.+++.++|+|++++++
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~~~   86 (296)
T cd05095           9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED--ANKNARNDFLKEIKIMSRLKDPNIIRLLA   86 (296)
T ss_pred             eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence            35789999999999986421                   3889988753  23445678889999999999999999999


Q ss_pred             EEecCCceEEEEecCCCCCHhHHHhhhc----------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHh
Q psy697           62 ACMKPPHLAIVTSKCNGHTLYTNIHIYK----------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLE  131 (157)
Q Consensus        62 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~  131 (157)
                      ++...+..+++|||+++++|.+++....          ..+++..+..++.|++.                      +++
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------al~  144 (296)
T cd05095          87 VCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIAS----------------------GMK  144 (296)
T ss_pred             EEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHH----------------------HHH
Confidence            9999999999999999999999987632          13566778888887777                      777


Q ss_pred             ccccccccccCCCCcccccccc
Q psy697          132 KLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       132 ~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|+++++|+|+|+.|++..+.
T Consensus       145 ~lH~~~i~H~dlkp~Nili~~~  166 (296)
T cd05095         145 YLSSLNFVHRDLATRNCLVGKN  166 (296)
T ss_pred             HHHHCCeecccCChheEEEcCC
Confidence            8888899999999999888653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.85  E-value=4e-20  Score=128.14  Aligned_cols=131  Identities=21%  Similarity=0.289  Sum_probs=110.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||+|....   .+++|.+......+......+.+|+.++++++|+|++++++.+...+..+++|||+++
T Consensus         7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (267)
T cd08224           7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADA   86 (267)
T ss_pred             eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCC
Confidence            5789999999999999863   4999988754434445577889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|..++...   +..+++.++..++.++++                      ++.++|+.+++|+|+++.|++....+
T Consensus        87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lh~~~i~h~dl~p~nil~~~~~  143 (267)
T cd08224          87 GDLSRMIKHFKKQKRLIPERTIWKYFVQLCS----------------------ALEHMHSKRIMHRDIKPANVFITATG  143 (267)
T ss_pred             CCHHHHHHHhcccCCCcCHHHHHHHHHHHHH----------------------HHHHHHhCCEecCCcChhhEEECCCC
Confidence            9999998642   235788889888887777                      78888999999999999998886543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.85  E-value=3.1e-20  Score=130.93  Aligned_cols=129  Identities=20%  Similarity=0.302  Sum_probs=106.4

Q ss_pred             CCCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEe
Q psy697            1 MGDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      +.+.||+|+||.||+|....     .+++|.+...  ......+.+..|+.++.++ +|||++++++++...+.+++++|
T Consensus         6 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e   83 (297)
T cd05089           6 FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIE   83 (297)
T ss_pred             eeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEE
Confidence            35789999999999998754     2678877642  2344566788999999999 79999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccccc
Q psy697           75 KCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRIL  139 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~  139 (157)
                      |+++++|.+++....               ..+++..+..++.|++.                      +++++|+++++
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------al~~lH~~~iv  141 (297)
T cd05089          84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVAT----------------------GMQYLSEKQFI  141 (297)
T ss_pred             ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcc
Confidence            999999999997532               14777888888887777                      77788888999


Q ss_pred             ccCCCCcccccccc
Q psy697          140 ARSPSHPLNLSRSA  153 (157)
Q Consensus       140 ~rd~k~~~~~~~~~  153 (157)
                      |||+|+.|++....
T Consensus       142 H~dlkp~Nill~~~  155 (297)
T cd05089         142 HRDLAARNVLVGEN  155 (297)
T ss_pred             cCcCCcceEEECCC
Confidence            99999999988654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.85  E-value=3.2e-20  Score=128.37  Aligned_cols=127  Identities=23%  Similarity=0.342  Sum_probs=107.3

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.+.||+|+||.||+|....  .+++|.+....    ...+.+.+|+.++..++|+|++++++.+...+..++++||+++
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   85 (261)
T cd05072          10 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK   85 (261)
T ss_pred             EeeecCCcCCceEEEEEecCCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence            35789999999999998755  48999876532    2356788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++.... ..+++..+..++.|++.                      +++++|..+++|||+++.|++....
T Consensus        86 ~~L~~~l~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~LH~~~i~H~dl~p~nili~~~  139 (261)
T cd05072          86 GSLLDFLKSDEGGKVLLPKLIDFSAQIAE----------------------GMAYIERKNYIHRDLRAANVLVSES  139 (261)
T ss_pred             CcHHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccccchhhEEecCC
Confidence            99999997642 35788888888887777                      7778888899999999999887654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.85  E-value=3e-20  Score=131.38  Aligned_cols=129  Identities=22%  Similarity=0.401  Sum_probs=105.5

Q ss_pred             CCCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCce
Q psy697            1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHL   69 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~   69 (157)
                      +.+.||+|+||.||++....          .+++|.+...  ......+.+.+|+..+..+ +|||++++++.+...+..
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~   96 (304)
T cd05101          19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL   96 (304)
T ss_pred             ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc--cchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCce
Confidence            35789999999999997521          3889988653  2234566788999999999 899999999999999999


Q ss_pred             EEEEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697           70 AIVTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      +++|||+++|+|.+++...+               ..+++..+..++.|++.                      ++.++|
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~LH  154 (304)
T cd05101          97 YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVAR----------------------GMEYLA  154 (304)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHH----------------------HHHHHH
Confidence            99999999999999997632               13566777777777666                      888899


Q ss_pred             cccccccCCCCcccccccc
Q psy697          135 KKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       135 ~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++++|||+|+.|++....
T Consensus       155 ~~givH~dlkp~Nili~~~  173 (304)
T cd05101         155 SQKCIHRDLAARNVLVTEN  173 (304)
T ss_pred             HCCeeecccccceEEEcCC
Confidence            9999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.85  E-value=2.9e-20  Score=128.31  Aligned_cols=126  Identities=27%  Similarity=0.413  Sum_probs=108.3

Q ss_pred             CccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +.||+|++|.||++.+..      .+++|.+.....  ....+.+.+|+..+++++|||++++++.+.. ...++++||+
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL--SDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCccc--HHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence            478999999999998754      389999987542  1567788999999999999999999999888 8899999999


Q ss_pred             CCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++++|.+++.... ..+++..+..++.|++.                      +|+++|.++++|+|+++.|++..+.
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~----------------------~L~~lH~~~i~H~di~p~nil~~~~  133 (257)
T cd05040          78 PLGSLLDRLRKDALGHFLISTLCDYAVQIAN----------------------GMRYLESKRFIHRDLAARNILLASD  133 (257)
T ss_pred             CCCcHHHHHHhcccccCcHHHHHHHHHHHHH----------------------HHHHHHhCCccccccCcccEEEecC
Confidence            9999999998754 36889999999988777                      7788888899999999999888654

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.85  E-value=6.9e-20  Score=126.02  Aligned_cols=128  Identities=27%  Similarity=0.426  Sum_probs=109.7

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      +.||+|+||.||++...+  .+++|.+....  .......+.+|+.+++.++|||++++++++......++++||+++++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   78 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTL--PPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS   78 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence            479999999999998753  59999887653  22456788999999999999999999999999999999999999999


Q ss_pred             HhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           81 LYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        81 L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |.+++......+++..+..++.+++.                      +++++|+++++|||+++.|++....+
T Consensus        79 l~~~l~~~~~~~~~~~~~~~~~~~~~----------------------~l~~lH~~~i~h~di~p~nili~~~~  130 (251)
T cd05041          79 LLTFLRKKKNRLTVKKLLQMSLDAAA----------------------GMEYLESKNCIHRDLAARNCLVGENN  130 (251)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEehhhcCcceEEEcCCC
Confidence            99999765446788888888887777                      88889999999999999999886543

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.85  E-value=5e-20  Score=128.56  Aligned_cols=128  Identities=17%  Similarity=0.293  Sum_probs=104.9

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+.+        .+|+|.+...  ........+.+|+.++..++|||++++++++......+++|
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   88 (277)
T cd05062          11 SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM   88 (277)
T ss_pred             eeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEE
Confidence            4689999999999998642        3899988653  23344567889999999999999999999998888999999


Q ss_pred             ecCCCCCHhHHHhhhcc---------cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           74 SKCNGHTLYTNIHIYKE---------KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                      ||+++++|.+++...+.         .+++..+..++.|++.                      +++++|+++++|+|+|
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lH~~~~vH~dlk  146 (277)
T cd05062          89 ELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD----------------------GMAYLNANKFVHRDLA  146 (277)
T ss_pred             ecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCcc
Confidence            99999999999875321         2466677777777666                      8888899999999999


Q ss_pred             Ccccccccc
Q psy697          145 HPLNLSRSA  153 (157)
Q Consensus       145 ~~~~~~~~~  153 (157)
                      +.|++..+.
T Consensus       147 p~Nil~~~~  155 (277)
T cd05062         147 ARNCMVAED  155 (277)
T ss_pred             hheEEEcCC
Confidence            999988754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=4.3e-20  Score=127.64  Aligned_cols=128  Identities=23%  Similarity=0.379  Sum_probs=110.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.+|+|+||.||++....   .+++|.+...   .....+.+.+|+.++++++|||++++++.+...+.++++|||+++
T Consensus         8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~   84 (262)
T cd06613           8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLE---PGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGG   84 (262)
T ss_pred             EEEecCCCceEEEEeEecCCCCEEEEEEEEcC---chhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCC
Confidence            4679999999999998754   4999999764   233567889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++......+++..+..++.|++.                      ++.++|+++++|+|+++.|++.....
T Consensus        85 ~~l~~~~~~~~~~l~~~~~~~~~~ql~~----------------------~l~~lh~~~i~h~dl~p~ni~i~~~~  138 (262)
T cd06613          85 GSLQDIYQVTRGPLSELQIAYVCRETLK----------------------GLAYLHETGKIHRDIKGANILLTEDG  138 (262)
T ss_pred             CcHHHHHHhhccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCceecCCChhhEEECCCC
Confidence            9999999876447999999999887777                      77778888999999999998877543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.84  E-value=6.4e-20  Score=126.90  Aligned_cols=127  Identities=24%  Similarity=0.346  Sum_probs=103.5

Q ss_pred             CccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEEec
Q psy697            3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVTSK   75 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~   75 (157)
                      +.||+|+||.||+|....      .+++|.+...  .+......+..|+.+++.++|||++++++.+.. .+..++++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence            478999999999998632      4899987543  334556788889999999999999999997764 5568899999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +.+|+|.+++.......++..+..++.|++.                      +++++|+++++|||+++.|++..+.
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlk~~nili~~~  134 (262)
T cd05058          79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAK----------------------GMEYLASKKFVHRDLAARNCMLDES  134 (262)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccccccCcceEEEcCC
Confidence            9999999999865435677777777777777                      7888888899999999999888654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.84  E-value=4.4e-20  Score=132.17  Aligned_cols=129  Identities=22%  Similarity=0.399  Sum_probs=106.2

Q ss_pred             CCCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCce
Q psy697            1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHL   69 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~   69 (157)
                      +++.||+|+||.||++...+          .+++|.+...  ......+.+..|+.++.++ +|||++++++++...+.+
T Consensus        16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~   93 (334)
T cd05100          16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL   93 (334)
T ss_pred             ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCce
Confidence            46789999999999997532          3789988753  2344567888999999999 899999999999999999


Q ss_pred             EEEEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697           70 AIVTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      ++++||+++|+|.+++....               ..+++..+..++.|++.                      ++.++|
T Consensus        94 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------al~~LH  151 (334)
T cd05100          94 YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVAR----------------------GMEYLA  151 (334)
T ss_pred             EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHH----------------------HHHHHH
Confidence            99999999999999987532               13667777778777776                      888889


Q ss_pred             cccccccCCCCcccccccc
Q psy697          135 KKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       135 ~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++++|||+|+.|++....
T Consensus       152 ~~givH~dlkp~Nill~~~  170 (334)
T cd05100         152 SQKCIHRDLAARNVLVTED  170 (334)
T ss_pred             HCCeeccccccceEEEcCC
Confidence            9999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=5.2e-20  Score=127.35  Aligned_cols=131  Identities=24%  Similarity=0.309  Sum_probs=108.7

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCC--HHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDD--EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      +.+.||+|++|.||.+....   ++++|.+.......  ....+.+.+|+.++.+++|||++++++++.....+++++||
T Consensus         6 ~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   85 (263)
T cd06625           6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEY   85 (263)
T ss_pred             ccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEE
Confidence            35789999999999998643   59999887543111  12345788899999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.+++...+ .+++..+..++.|++.                      ++.++|+.+++|+|+++.|++..+.+
T Consensus        86 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~----------------------~l~~lH~~~i~H~dl~p~nilv~~~~  141 (263)
T cd06625          86 MPGGSVKDQLKAYG-ALTETVTRKYTRQILE----------------------GVEYLHSNMIVHRDIKGANILRDSAG  141 (263)
T ss_pred             CCCCcHHHHHHHhC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            99999999998755 6888888888887777                      77778888999999999998887643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG4236|consensus

Probab=99.84  E-value=1.6e-20  Score=137.03  Aligned_cols=130  Identities=25%  Similarity=0.280  Sum_probs=110.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|.||.||-|.+++   .||||++++..+. .+....+.+|+.++.++.||.||.+.-.+++++.+++|||-+. 
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp-~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-  646 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFP-TKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-  646 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCC-CchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-
Confidence            3689999999999999876   4999999988743 3445789999999999999999999999999999999999995 


Q ss_pred             CCHhHHHhh-hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           79 HTLYTNIHI-YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        79 g~L~~~i~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      |+..++|-. .++.+++.....++.||+.                      +|.++|.++|+|.|+|++|+|..|++.
T Consensus       647 GDMLEMILSsEkgRL~er~TkFlvtQIL~----------------------ALr~LH~knIvHCDLKPENVLLas~~~  702 (888)
T KOG4236|consen  647 GDMLEMILSSEKGRLPERITKFLVTQILV----------------------ALRYLHFKNIVHCDLKPENVLLASASP  702 (888)
T ss_pred             chHHHHHHHhhcccchHHHHHHHHHHHHH----------------------HHHHhhhcceeeccCCchheeeccCCC
Confidence            566555544 4567888877777776555                      899999999999999999999998853

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.84  E-value=2.3e-20  Score=146.50  Aligned_cols=135  Identities=21%  Similarity=0.310  Sum_probs=109.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~   76 (157)
                      .+.||+|+||.||++.+..   .+++|.+.... ........+..|+.++..++||||+++++++...  ..+|++|||+
T Consensus        18 l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~-l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~   96 (1021)
T PTZ00266         18 IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG-LKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFC   96 (1021)
T ss_pred             EEEEecCCCeEEEEEEECCCCeEEEEEEEeccc-cCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCC
Confidence            5679999999999999865   38999987654 3445567889999999999999999999988653  5689999999


Q ss_pred             CCCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           77 NGHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        77 ~~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++|+|.++|...   ...+++..++.++.||+. ++.|||+....              ...++|+|||+|+.|+|..+
T Consensus        97 ~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~-ALaYLHs~g~~--------------~~~k~IVHRDLKPeNILL~s  160 (1021)
T PTZ00266         97 DAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH-ALAYCHNLKDG--------------PNGERVLHRDLKPQNIFLST  160 (1021)
T ss_pred             CCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHH-HHHHHHhcccc--------------cccCCceeccCcHHHeEeec
Confidence            999999999763   236899999999999999 77777654321              01357999999999999854

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.84  E-value=6.2e-20  Score=126.55  Aligned_cols=129  Identities=21%  Similarity=0.282  Sum_probs=108.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.++...  .....+.+..|+.+++.++|||++++++.+...+.+++++||+++
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   82 (255)
T cd08219           5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDG   82 (255)
T ss_pred             EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCC
Confidence            5789999999999998755   49999986542  234566778899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... ..+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+.+
T Consensus        83 ~~l~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------al~~lH~~~i~H~dl~p~nili~~~~  137 (255)
T cd08219          83 GDLMQKIKLQRGKLFPEDTILQWFVQMCL----------------------GVQHIHEKRVLHRDIKSKNIFLTQNG  137 (255)
T ss_pred             CcHHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHhhCCcccCCCCcceEEECCCC
Confidence            99999887533 35788888888887777                      78888999999999999999886543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.84  E-value=3.6e-20  Score=129.28  Aligned_cols=128  Identities=22%  Similarity=0.316  Sum_probs=106.9

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|....        .+++|.+...  ......+.+.+|+.++..++|||++++++.+......+++|
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   87 (280)
T cd05049          10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKET--ASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVF   87 (280)
T ss_pred             HhhccccCCceEeeeeeccccCcCCcceEEEEeeccc--CCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEE
Confidence            4689999999999998632        4899998764  23335678899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc-------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccc
Q psy697           74 SKCNGHTLYTNIHIYK-------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILA  140 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~-------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~  140 (157)
                      ||+++++|.+++...+             ..+++..+..++.|++.                      ++.++|.++++|
T Consensus        88 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~----------------------~l~~lH~~~i~h  145 (280)
T cd05049          88 EYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIAS----------------------GMVYLASQHFVH  145 (280)
T ss_pred             ecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHH----------------------HHHHHhhCCeec
Confidence            9999999999997542             23677777888887666                      888899999999


Q ss_pred             cCCCCcccccccc
Q psy697          141 RSPSHPLNLSRSA  153 (157)
Q Consensus       141 rd~k~~~~~~~~~  153 (157)
                      ||+|+.|++....
T Consensus       146 ~dlkp~nili~~~  158 (280)
T cd05049         146 RDLATRNCLVGYD  158 (280)
T ss_pred             cccccceEEEcCC
Confidence            9999999887543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.84  E-value=3.3e-20  Score=133.36  Aligned_cols=85  Identities=28%  Similarity=0.471  Sum_probs=69.6

Q ss_pred             CCCccccCceeeEEEEEEe--------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC-CceE
Q psy697            1 MGDRIGKGHFGTVYNGNWH--------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP-PHLA   70 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~--------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~~~   70 (157)
                      +++.||+|+||.||+|.+.        ..+|+|.+....  .......+.+|+.++..+ +|||++++++++... ...+
T Consensus        11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~   88 (343)
T cd05103          11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM   88 (343)
T ss_pred             ccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceE
Confidence            4688999999999999752        149999997642  234456788899999999 789999999988664 5678


Q ss_pred             EEEecCCCCCHhHHHhh
Q psy697           71 IVTSKCNGHTLYTNIHI   87 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~   87 (157)
                      ++|||+++|+|.+++..
T Consensus        89 lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          89 VIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             EEEeccCCCcHHHHHHh
Confidence            99999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.84  E-value=3.6e-20  Score=128.40  Aligned_cols=127  Identities=28%  Similarity=0.448  Sum_probs=108.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||+|...+   .+++|.+...    ......+.+|+.++..++|||++++++.+...+.++++|||+++
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (263)
T cd05052          11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY   86 (263)
T ss_pred             eeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCC
Confidence            4679999999999999865   4999988753    23356688899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... ..+++..+..++.|++.                      ++.++|+++++|||+|+.|++..+..
T Consensus        87 ~~L~~~~~~~~~~~l~~~~~~~~~~ql~~----------------------~l~~lH~~~i~H~dlkp~nil~~~~~  141 (263)
T cd05052          87 GNLLDYLRECNRQEVNAVVLLYMATQISS----------------------AMEYLEKKNFIHRDLAARNCLVGENH  141 (263)
T ss_pred             CcHHHHHHhCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeecccCcceEEEcCCC
Confidence            99999997643 25788888888887777                      88889999999999999999886544

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.84  E-value=5.3e-20  Score=130.72  Aligned_cols=130  Identities=21%  Similarity=0.391  Sum_probs=107.2

Q ss_pred             CCCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCce
Q psy697            1 MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHL   69 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~   69 (157)
                      +++.||+|+||.||++...+          .+++|.+...  ........+..|+.++..+ +|||++++++++...+.+
T Consensus        16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~   93 (314)
T cd05099          16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN--ATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPL   93 (314)
T ss_pred             eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCC--CChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCce
Confidence            35789999999999997521          3889988754  2344566788899999999 699999999999988899


Q ss_pred             EEEEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697           70 AIVTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      +++|||+++|+|.+++....               ..+++..+..++.|++.                      +|+++|
T Consensus        94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------aL~~lH  151 (314)
T cd05099          94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVAR----------------------GMEYLE  151 (314)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHH----------------------HHHHHH
Confidence            99999999999999997632               24777888888887777                      888899


Q ss_pred             cccccccCCCCccccccccc
Q psy697          135 KKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       135 ~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|||+|+.|++.....
T Consensus       152 ~~gi~H~dlkp~Nill~~~~  171 (314)
T cd05099         152 SRRCIHRDLAARNVLVTEDN  171 (314)
T ss_pred             HCCeeeccccceeEEEcCCC
Confidence            99999999999999887543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.84  E-value=6.2e-20  Score=128.40  Aligned_cols=128  Identities=20%  Similarity=0.182  Sum_probs=100.9

Q ss_pred             ccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHH---HHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            4 RIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTT---FRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~---l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .||+|+||.||++....   .+|+|.+.............+.++..+   +....|||++.+++.+...+..+++|||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            48999999999998754   499998876542222222233344333   333479999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...+ .+++..+..++.|++.                      +++++|+++++|||+|+.|++..+.+
T Consensus        81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~----------------------al~~lH~~~ivH~dikp~Nil~~~~~  134 (279)
T cd05633          81 GGDLHYHLSQHG-VFSEKEMRFYATEIIL----------------------GLEHMHNRFVVYRDLKPANILLDEHG  134 (279)
T ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcCCCCCCHHHEEECCCC
Confidence            999999987655 7999999999998777                      77788888999999999999887654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.84  E-value=3.9e-20  Score=128.31  Aligned_cols=129  Identities=20%  Similarity=0.301  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCC---CHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD---DEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ++.||+|++|.||++....   .+++|.+......   .....+.+..|+..++.++|+|++++++.+...+..++++||
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~   84 (268)
T cd06630           5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEW   84 (268)
T ss_pred             cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEec
Confidence            5789999999999998744   4999998754311   122456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++++|.+++...+ .+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+.
T Consensus        85 ~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~----------------------al~~LH~~~i~H~~i~~~nil~~~~  139 (268)
T cd06630          85 MAGGSVSHLLSKYG-AFKEAVIINYTEQLLR----------------------GLSYLHENQIIHRDVKGANLLIDST  139 (268)
T ss_pred             cCCCcHHHHHHHhC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEcCC
Confidence            99999999998655 7899999999887777                      7777888888999999988887554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.84  E-value=6.2e-20  Score=127.03  Aligned_cols=127  Identities=17%  Similarity=0.141  Sum_probs=108.7

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      ||.|++|.||++....   .+++|.+...........+.+.+|+.+++.++|||++++++.+.....+++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6999999999999864   4999999765433445567789999999999999999999999999999999999999999


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+++.... .+++..+..++.|++.                      +|+++|+++++|+|+++.|++..+..
T Consensus        81 ~~~l~~~~-~l~~~~~~~~~~~i~~----------------------~l~~lH~~~~~h~dl~~~nilv~~~~  130 (262)
T cd05572          81 WTILRDRG-LFDEYTARFYIACVVL----------------------AFEYLHNRGIIYRDLKPENLLLDSNG  130 (262)
T ss_pred             HHHHhhcC-CCCHHHHHHHHHHHHH----------------------HHHHHhhCCcccCCCCHHHEEEcCCC
Confidence            99998754 6888888888887777                      88888988999999999998876543

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.84  E-value=7.4e-20  Score=126.90  Aligned_cols=130  Identities=25%  Similarity=0.389  Sum_probs=107.1

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCH------HHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE------KTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   71 (157)
                      +++.||+|++|.||+|....   .+++|.+........      .....+.+|+.++.+++|||++++++++...+..++
T Consensus         4 ~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (267)
T cd06628           4 KGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNI   83 (267)
T ss_pred             ccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEE
Confidence            46789999999999998744   499998875432211      223567889999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           72 VTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      ++||+++++|.+++...+ .+++..+..++.|++.                      +++++|+++++|||+++.|++..
T Consensus        84 v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~----------------------~l~~lH~~~ivH~di~p~nil~~  140 (267)
T cd06628          84 FLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILK----------------------GLNYLHNRGIIHRDIKGANILVD  140 (267)
T ss_pred             EEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHH----------------------HHHHHHhcCcccccCCHHHEEEc
Confidence            999999999999998754 6888888888887777                      77778888889999998888775


Q ss_pred             cc
Q psy697          152 SA  153 (157)
Q Consensus       152 ~~  153 (157)
                      +.
T Consensus       141 ~~  142 (267)
T cd06628         141 NK  142 (267)
T ss_pred             CC
Confidence            43

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.84  E-value=5.8e-20  Score=129.14  Aligned_cols=129  Identities=23%  Similarity=0.381  Sum_probs=107.0

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   72 (157)
                      .+.||+|+||.||++...+        .+++|.+...  ........+.+|+.++..+ +|+|++++++.+...+.++++
T Consensus        17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li   94 (293)
T cd05053          17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVV   94 (293)
T ss_pred             eeEecccccccEEEEEEecCCCCCCceeEEEEEccCC--CCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEE
Confidence            4679999999999998742        4899988764  2334456688999999999 899999999999999999999


Q ss_pred             EecCCCCCHhHHHhhh---------------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697           73 TSKCNGHTLYTNIHIY---------------KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~---------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      |||+++|+|..++...               ...+++..+..++.|++.                      +++++|+++
T Consensus        95 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------al~~LH~~~  152 (293)
T cd05053          95 VEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVAR----------------------GMEFLASKK  152 (293)
T ss_pred             EEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHH----------------------HHHHHHHCC
Confidence            9999999999998642               125788888888887777                      788888889


Q ss_pred             ccccCCCCccccccccc
Q psy697          138 ILARSPSHPLNLSRSAE  154 (157)
Q Consensus       138 ~~~rd~k~~~~~~~~~~  154 (157)
                      ++|||+|+.|++.....
T Consensus       153 ivH~dlkp~Nil~~~~~  169 (293)
T cd05053         153 CIHRDLAARNVLVTEDH  169 (293)
T ss_pred             ccccccceeeEEEcCCC
Confidence            99999999998876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.84  E-value=1.1e-20  Score=130.47  Aligned_cols=129  Identities=20%  Similarity=0.134  Sum_probs=110.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+...........+.+.+|+..+++++|||++++++.+......++++||+.+
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   84 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLG   84 (258)
T ss_pred             EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCC
Confidence            5689999999999999864   4999999865433445567889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+.+.... .+++..+..++.|+++                      ++.++|+++++|+|+++.|++..+.
T Consensus        85 ~~L~~~l~~~~-~l~~~~~~~~~~~i~~----------------------~l~~lh~~~i~h~dl~~~nil~~~~  136 (258)
T cd05578          85 GDLRYHLSQKV-KFSEEQVKFWICEIVL----------------------ALEYLHSKGIIHRDIKPDNILLDEQ  136 (258)
T ss_pred             CCHHHHHHhcC-CcCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCHHHeEEcCC
Confidence            99999998753 7899999999887777                      7777888889999999999887653

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.84  E-value=5.6e-20  Score=131.32  Aligned_cols=127  Identities=17%  Similarity=0.174  Sum_probs=106.2

Q ss_pred             CccccC--ceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKG--HFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G--~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      ..||+|  +||.||++.+..   .+|+|++.... ......+.+.+|+.++..++||||+++++.+...+..++++||+.
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLEN-CTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            456776  899999998854   59999987653 334456778889999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           78 GHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        78 ~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++++.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~----------------------aL~~lH~~~ivHrDlkp~Nill~~  136 (328)
T cd08226          83 YGSANSLLKTYFPEGMSEALIGNILFGALR----------------------GLNYLHQNGYIHRNIKASHILISG  136 (328)
T ss_pred             CCCHHHHHHhhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEeC
Confidence            999999988643 24788888888887777                      778888889999999999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.84  E-value=7.9e-20  Score=127.40  Aligned_cols=129  Identities=18%  Similarity=0.269  Sum_probs=106.6

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||++....        .+++|.+...  ........+.+|+.++..++|||++++++++......+++|
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~   88 (277)
T cd05032          11 IRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNEN--ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVM   88 (277)
T ss_pred             EeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCc--cCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEE
Confidence            4679999999999998752        4899998654  23345567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc---------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           74 SKCNGHTLYTNIHIYK---------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                      ||+++|+|.+++....         ..+++..+..++.|++.                      ++.++|+++++|||++
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~di~  146 (277)
T cd05032          89 ELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIAD----------------------GMAYLAAKKFVHRDLA  146 (277)
T ss_pred             ecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccccccC
Confidence            9999999999987532         13577788888887777                      7777888899999999


Q ss_pred             Cccccccccc
Q psy697          145 HPLNLSRSAE  154 (157)
Q Consensus       145 ~~~~~~~~~~  154 (157)
                      +.|++..+..
T Consensus       147 p~nill~~~~  156 (277)
T cd05032         147 ARNCMVAEDL  156 (277)
T ss_pred             hheEEEcCCC
Confidence            9998876543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.84  E-value=7.7e-20  Score=126.76  Aligned_cols=130  Identities=22%  Similarity=0.388  Sum_probs=107.7

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCC---CHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLD---DEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      +++.||+|+||.||+|....  .+|+|.+......   .......+.+|+..++.++|+|++++.+++...+..++++||
T Consensus         4 ~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (265)
T cd06631           4 KGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEF   83 (265)
T ss_pred             ccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEec
Confidence            35789999999999997643  4899988754211   122345688899999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++++|.+++...+ .+++..+..++.|++.                      +++++|+++++|+|+++.|++..+.
T Consensus        84 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~nil~~~~  138 (265)
T cd06631          84 VPGGSISSILNRFG-PLPEPVFCKYTKQILD----------------------GVAYLHNNCVVHRDIKGNNVMLMPN  138 (265)
T ss_pred             CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCcCHHhEEECCC
Confidence            99999999998654 6888888888887777                      7888888899999999999888654

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.84  E-value=1.3e-19  Score=125.18  Aligned_cols=126  Identities=21%  Similarity=0.315  Sum_probs=105.8

Q ss_pred             CccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            3 DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +.||+|+||.||+|.+..      .+++|.+.... . ....+.+..|+.+++.++|||++++++.+. ....+++|||+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~-~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~   77 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEH-I-AAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA   77 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEeccccc-c-hHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence            479999999999997633      48999987653 1 245667889999999999999999999775 44679999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++++|.+++.... .+++..+..++.|++.                      +++++|.++++|+|+++.|++.....
T Consensus        78 ~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lh~~~i~H~di~p~nili~~~~  132 (257)
T cd05060          78 PLGPLLKYLKKRR-EIPVSDLKELAHQVAM----------------------GMAYLESKHFVHRDLAARNVLLVNRH  132 (257)
T ss_pred             CCCcHHHHHHhCC-CCCHHHHHHHHHHHHH----------------------HHHHHhhcCeeccCcccceEEEcCCC
Confidence            9999999998755 6899999999998888                      78888999999999999998876543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.84  E-value=9.4e-20  Score=125.54  Aligned_cols=130  Identities=32%  Similarity=0.516  Sum_probs=111.4

Q ss_pred             CCCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      +.+.||+|+||.||++....       .+++|.+....  .......+..|+..+..++|+|++++++.+...+..+++|
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            46789999999999998853       48999997642  2235678889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhccc-CCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEK-FALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ||+++++|.+++...... +++..+..++.|++.                      ++.++|+++++|+|+++.|++..+
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~----------------------~l~~lh~~~~~h~dl~~~nil~~~  138 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIAR----------------------GMEYLESKNFIHRDLAARNCLVGE  138 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHH----------------------HHHHHhcCCeeecccccceEEEcc
Confidence            999999999999865423 899999999997777                      777888889999999999999877


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      .+
T Consensus       139 ~~  140 (258)
T smart00219      139 NL  140 (258)
T ss_pred             CC
Confidence            65

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.84  E-value=4.7e-20  Score=129.03  Aligned_cols=129  Identities=19%  Similarity=0.185  Sum_probs=107.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+.... ......+.+.+|+.+++.++|||++++++.+.....++++|||+++
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~   84 (286)
T cd07847           6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE-DDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDH   84 (286)
T ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEEeecc-cCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCc
Confidence            4679999999999999864   49999886543 2223345678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|..++.... .+++..+..++.|++.                      +|+++|+.+++|+|+++.|++..+.+
T Consensus        85 ~~l~~~~~~~~-~~~~~~~~~~~~ql~~----------------------~l~~LH~~~i~H~dl~p~nil~~~~~  137 (286)
T cd07847          85 TVLNELEKNPR-GVPEHLIKKIIWQTLQ----------------------AVNFCHKHNCIHRDVKPENILITKQG  137 (286)
T ss_pred             cHHHHHHhCCC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCceecCCChhhEEEcCCC
Confidence            88888776544 6899999999998777                      78888989999999999998886543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0201|consensus

Probab=99.84  E-value=6.1e-22  Score=140.66  Aligned_cols=127  Identities=20%  Similarity=0.348  Sum_probs=109.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|+++...  ..........|+.++.+++++|+.++|+++.....+|++||||.+
T Consensus        18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~g   95 (467)
T KOG0201|consen   18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGG   95 (467)
T ss_pred             chhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcC
Confidence            3679999999999999866   49999999874  334566778899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |++.++++... .+++..+.-+++                      +++.+++++|.++.+|||+|+.|+|..+.
T Consensus        96 Gsv~~lL~~~~-~~~E~~i~~ilr----------------------e~l~~l~ylH~~~kiHrDIKaanil~s~~  147 (467)
T KOG0201|consen   96 GSVLDLLKSGN-ILDEFEIAVILR----------------------EVLKGLDYLHSEKKIHRDIKAANILLSES  147 (467)
T ss_pred             cchhhhhccCC-CCccceeeeehH----------------------HHHHHhhhhhhcceecccccccceeEecc
Confidence            99999998644 457777777777                      45559999999999999999999988765

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.84  E-value=7.8e-20  Score=126.42  Aligned_cols=128  Identities=27%  Similarity=0.429  Sum_probs=108.2

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.+.||+|+||.||++...+  .+++|.+....    .....+.+|+..++.++|||++++++.+......+++|||+++
T Consensus        10 i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   85 (261)
T cd05034          10 LERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT----MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSK   85 (261)
T ss_pred             eeeeeccCcceEEEEEEEcCCceEEEEEecCCc----cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCC
Confidence            35789999999999998765  48999887542    2345688899999999999999999999888899999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... ..+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+..
T Consensus        86 ~~L~~~i~~~~~~~~~~~~~~~~~~~i~~----------------------al~~lh~~~i~h~di~p~nili~~~~  140 (261)
T cd05034          86 GSLLDFLKSGEGKKLRLPQLVDMAAQIAE----------------------GMAYLESRNYIHRDLAARNILVGENL  140 (261)
T ss_pred             CCHHHHHhccccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCcchheEEEcCCC
Confidence            99999997643 35888888888887777                      78888999999999999998886643

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG3653|consensus

Probab=99.84  E-value=9.9e-21  Score=135.75  Aligned_cols=131  Identities=21%  Similarity=0.307  Sum_probs=109.7

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHh--cCCCceeeeeeEEecCC----ceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK--TRHENLVLFMGACMKPP----HLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e   74 (157)
                      .+.+|+|.||.||+|.+.+ .||||+++.      ...+.+.+|-.+.+.  ++|+||+++++.-....    .+++|++
T Consensus       215 ~eli~~Grfg~V~KaqL~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~  288 (534)
T KOG3653|consen  215 LELIGRGRFGCVWKAQLDNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE  288 (534)
T ss_pred             HHHhhcCccceeehhhccCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence            5689999999999999977 599999975      456777778777664  59999999998876654    7999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |-+.|+|.++++.+  ..+|.....++..+++ .+.|+|..-+            ...-|.-.|.|||+|..|+|.|+.
T Consensus       289 fh~kGsL~dyL~~n--tisw~~~cria~Smar-GLa~LHee~p------------~~d~~Kp~IaHRDlkSkNVLvK~D  352 (534)
T KOG3653|consen  289 FHPKGSLCDYLKAN--TISWNSLCRIAESMAR-GLAHLHEELP------------RGDHHKPPIAHRDLKSKNVLVKND  352 (534)
T ss_pred             eccCCcHHHHHHhc--cccHHHHHHHHHHHHH-HHHHhcccCC------------cCCCCCCccccccccccceEEccC
Confidence            99999999999975  6899999999999999 8888877644            122344579999999999999975

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.84  E-value=7.2e-20  Score=129.13  Aligned_cols=126  Identities=21%  Similarity=0.259  Sum_probs=106.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+....   ....+.+.+|+.+++.++|||++++++.+......+++|||+++
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~  100 (297)
T cd06656          24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  100 (297)
T ss_pred             eeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCC
Confidence            4679999999999998643   59999987632   23456678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...  .+++.++..++.|++.                      ++.++|+.+++|||+++.|++....+
T Consensus       101 ~~L~~~~~~~--~~~~~~~~~~~~~l~~----------------------~L~~LH~~~i~H~dL~p~Nili~~~~  152 (297)
T cd06656         101 GSLTDVVTET--CMDEGQIAAVCRECLQ----------------------ALDFLHSNQVIHRDIKSDNILLGMDG  152 (297)
T ss_pred             CCHHHHHHhC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEECCCC
Confidence            9999998753  5788888888887776                      78888888999999999999886543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.84  E-value=4.7e-20  Score=129.01  Aligned_cols=128  Identities=20%  Similarity=0.254  Sum_probs=105.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||+|....   .+++|.+.... .+......+.+|+.++..++|||++++++.+...+..+++|||++ 
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-   82 (285)
T cd07861           5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLES-EEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-   82 (285)
T ss_pred             eeEecccCceEEEEEEECCCCcEEEEEEecccc-ccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-
Confidence            5689999999999998754   49999987543 223334567889999999999999999999999999999999997 


Q ss_pred             CCHhHHHhhhc--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK--EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++....  ..+++..+..++.|++.                      +|+++|+++++|+|+++.|++..+.
T Consensus        83 ~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~L~~lH~~~i~H~dl~p~nil~~~~  137 (285)
T cd07861          83 MDLKKYLDSLPKGQYMDAELVKSYLYQILQ----------------------GILFCHSRRVLHRDLKPQNLLIDNK  137 (285)
T ss_pred             CCHHHHHhcCCCCCcCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeecCCCHHHEEEcCC
Confidence            68888886532  36889999999998877                      7777888899999999999887654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.84  E-value=8.7e-20  Score=128.26  Aligned_cols=128  Identities=22%  Similarity=0.301  Sum_probs=106.7

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||++....        .+++|.+..   ......+.+.+|+..+++++|||++++++++......+++|
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   86 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD---PTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVF   86 (291)
T ss_pred             eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC---ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEE
Confidence            4679999999999998532        278888765   33445567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccc
Q psy697           74 SKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRI  138 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~  138 (157)
                      ||+++++|.+++...+               ..+++..+..++.|++.                      +++++|++++
T Consensus        87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~----------------------al~~lH~~~i  144 (291)
T cd05094          87 EYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIAS----------------------GMVYLASQHF  144 (291)
T ss_pred             ecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCe
Confidence            9999999999997532               23788888888887777                      8888999999


Q ss_pred             cccCCCCccccccccc
Q psy697          139 LARSPSHPLNLSRSAE  154 (157)
Q Consensus       139 ~~rd~k~~~~~~~~~~  154 (157)
                      +|||+|+.|++.....
T Consensus       145 ~H~dlkp~Nil~~~~~  160 (291)
T cd05094         145 VHRDLATRNCLVGANL  160 (291)
T ss_pred             eecccCcceEEEccCC
Confidence            9999999999886543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG4279|consensus

Probab=99.84  E-value=6.5e-21  Score=142.79  Aligned_cols=128  Identities=22%  Similarity=0.328  Sum_probs=113.2

Q ss_pred             ccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            4 RIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      +||+|+||.||-|++..   ..|+|.++.   .+....+.+..|+.+-+.+.|.|||++.|++...+.+-|.||-.+||+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpe---kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPE---KDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeeccc---ccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            58999999999999877   389999987   445678899999999999999999999999999999999999999999


Q ss_pred             HhHHHhhhcccC--CHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccCC
Q psy697           81 LYTNIHIYKEKF--ALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESV  156 (157)
Q Consensus        81 L~~~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~~  156 (157)
                      |.++++..=+++  .+..+..+.+||++                      +|.|+|++.|+|||+|..|+|...+..+
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILe----------------------GLkYLHen~IVHRDIKGDNVLvNTySGv  714 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILE----------------------GLKYLHENKIVHRDIKGDNVLVNTYSGV  714 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHH----------------------HhhhhhhcceeeccccCCcEEEeeccce
Confidence            999998754455  77778888887666                      9999999999999999999999888754

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.84  E-value=5.1e-20  Score=128.81  Aligned_cols=129  Identities=13%  Similarity=0.143  Sum_probs=108.9

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+.||+|++|.||+|....   .+++|.+.... ........+.+|+.+++.++|||++++++++......++++||+ 
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-   81 (286)
T cd07832           4 ILGRIGEGAHGIVFKAKDRETGETVALKKVALRR-LEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-   81 (286)
T ss_pred             EEeecccCCCcEEEEEEECCCCceEEEEEEEccc-ccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-
Confidence            35789999999999999754   59999987654 22344567889999999999999999999999999999999999 


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++|.+++......+++.++..++.|++.                      +|+++|+.+++|+|+++.|++..+.
T Consensus        82 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~p~ni~~~~~  135 (286)
T cd07832          82 PSDLSEVLRDEERPLPEAQVKSYMRMLLK----------------------GVAYMHANGIMHRDLKPANLLISAD  135 (286)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCcCHHHEEEcCC
Confidence            99999999765557899999999998777                      7777888889999999998887653

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.84  E-value=8.2e-20  Score=127.54  Aligned_cols=127  Identities=25%  Similarity=0.206  Sum_probs=105.6

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      ||+|+||.||++....   .+++|.+.............+..|+.++..++|||++++++.+...+..+++|||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6899999999998754   5999998754322233455667899999999999999999999999999999999999999


Q ss_pred             hHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           82 YTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        82 ~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      .+++.... ..+++..+..++.|++.                      ++.++|.++++|+|+++.|++....
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~----------------------~l~~lH~~~i~H~di~p~Nil~~~~  131 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIIC----------------------GLEHLHQRRIVYRDLKPENVLLDDH  131 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCHHHEEECCC
Confidence            99987644 25889999999888777                      7777888889999999999887654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.84  E-value=6.4e-20  Score=128.32  Aligned_cols=128  Identities=23%  Similarity=0.371  Sum_probs=105.8

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|....        .+|+|.+...  ........+..|..++..++|||++++++.+...+..++++
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~   87 (283)
T cd05091          10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDK--AEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIF   87 (283)
T ss_pred             HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEE
Confidence            4679999999999998632        4999999754  23445667889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhh---------------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccc
Q psy697           74 SKCNGHTLYTNIHIY---------------KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRI  138 (157)
Q Consensus        74 e~~~~g~L~~~i~~~---------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~  138 (157)
                      ||+.+++|.+++...               +..+++..+..++.|++.                      +|+++|++++
T Consensus        88 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~----------------------aL~~lH~~gi  145 (283)
T cd05091          88 SYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAA----------------------GMEFLSSHHV  145 (283)
T ss_pred             EcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHH----------------------HHHHHHHcCc
Confidence            999999999998532               124677777788887777                      8888999999


Q ss_pred             cccCCCCcccccccc
Q psy697          139 LARSPSHPLNLSRSA  153 (157)
Q Consensus       139 ~~rd~k~~~~~~~~~  153 (157)
                      +|||+|+.|++....
T Consensus       146 ~H~dlkp~Nil~~~~  160 (283)
T cd05091         146 VHKDLATRNVLVFDK  160 (283)
T ss_pred             cccccchhheEecCC
Confidence            999999999987654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.84  E-value=7.1e-20  Score=126.28  Aligned_cols=126  Identities=21%  Similarity=0.339  Sum_probs=107.0

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++.+..  .+++|.+....    .....+..|+.+++.++|||++++++.+......++++||++++
T Consensus         9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (256)
T cd05112           9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA----MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHG   84 (256)
T ss_pred             EeeecCcccceEEEEEEeCCCeEEEEECCCCC----CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCC
Confidence            4679999999999998753  58999887543    12346788999999999999999999999889999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.+++......+++..+..++.|++.                      +++++|+++++|+|+++.|++....
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lH~~~i~h~dl~p~ni~i~~~  136 (256)
T cd05112          85 CLSDYLRAQRGKFSQETLLGMCLDVCE----------------------GMAYLESSNVIHRDLAARNCLVGEN  136 (256)
T ss_pred             cHHHHHHhCccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccccccceEEEcCC
Confidence            999999865546888888888887777                      7778888899999999999888654

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=7.2e-20  Score=130.00  Aligned_cols=131  Identities=19%  Similarity=0.185  Sum_probs=111.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+...........+.+..|+.++..++|||++++++.+......+++|||+.+
T Consensus         6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   85 (316)
T cd05574           6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPG   85 (316)
T ss_pred             eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCC
Confidence            4679999999999999855   5999999876433334566788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... ..+++..+..++.|++.                      +|+++|..+++|+|+|+.|++....+
T Consensus        86 ~~L~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlkp~Nili~~~~  140 (316)
T cd05574          86 GELFRLLQRQPGKCLSEEVARFYAAEVLL----------------------ALEYLHLLGIVYRDLKPENILLHESG  140 (316)
T ss_pred             CCHHHHHHhCCCCccCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCChHHeEEcCCC
Confidence            99999987642 36888888888887777                      77888888999999999999987543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.83  E-value=1e-19  Score=127.09  Aligned_cols=128  Identities=25%  Similarity=0.400  Sum_probs=107.9

Q ss_pred             CCccccCceeeEEEEEEe-------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--CCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH-------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--PPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~-------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv   72 (157)
                      .+.||+|+||.||++.+.       ..+|+|.+....  .......+.+|+..++.++|||++++++++..  ....+++
T Consensus         9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   86 (284)
T cd05038           9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSG--EEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLI   86 (284)
T ss_pred             heeeccCCCeeEEEeeecCCCCCCceEEEEEEecccc--chHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEE
Confidence            467999999999999864       149999998653  11356788999999999999999999998877  5578999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++++|.+++......+++..+..++.|++.                      +|+++|+++++|+|+++.|++...
T Consensus        87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~----------------------aL~~lH~~~i~H~dl~p~nil~~~  144 (284)
T cd05038          87 MEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICK----------------------GMDYLGSQRYIHRDLAARNILVES  144 (284)
T ss_pred             EecCCCCCHHHHHHhCccccCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHhEEEcC
Confidence            9999999999999876546899999999888777                      788889999999999999988765


Q ss_pred             c
Q psy697          153 A  153 (157)
Q Consensus       153 ~  153 (157)
                      .
T Consensus       145 ~  145 (284)
T cd05038         145 E  145 (284)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.83  E-value=5.5e-20  Score=137.83  Aligned_cols=130  Identities=20%  Similarity=0.169  Sum_probs=106.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC--------ceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP--------HLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--------~~~   70 (157)
                      .+.||+|+||.||++....   .+|+|.+.... .+......+.+|+..+..++|+|+++++..+...+        .++
T Consensus        37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~-~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~  115 (496)
T PTZ00283         37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEG-MSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIA  115 (496)
T ss_pred             EEEEecCCCEEEEEEEEcCCCCEEEEEEEeccc-CCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEE
Confidence            4689999999999998754   59999997754 34556677889999999999999999987765432        368


Q ss_pred             EEEecCCCCCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           71 IVTSKCNGHTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ++|||+++|+|.+++....   ..+++..+..++.|++.                      +|+++|+++++|||+|+.|
T Consensus       116 lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~----------------------aL~~lH~~~IiHrDLKP~N  173 (496)
T PTZ00283        116 LVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLL----------------------AVHHVHSKHMIHRDIKSAN  173 (496)
T ss_pred             EEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEecCCCCHHH
Confidence            9999999999999987532   35888888888887777                      7888889999999999999


Q ss_pred             ccccccc
Q psy697          148 NLSRSAE  154 (157)
Q Consensus       148 ~~~~~~~  154 (157)
                      ++..+..
T Consensus       174 ILl~~~~  180 (496)
T PTZ00283        174 ILLCSNG  180 (496)
T ss_pred             EEEeCCC
Confidence            9987643

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.83  E-value=6.5e-20  Score=131.56  Aligned_cols=129  Identities=25%  Similarity=0.427  Sum_probs=103.1

Q ss_pred             CCCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC-CceE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP-PHLA   70 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~~~   70 (157)
                      +.+.||+|+||.||+|...+        .+|+|.+....  .....+.+..|+.++..+ +|+|++++++++... ..++
T Consensus        11 i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~   88 (337)
T cd05054          11 LGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLM   88 (337)
T ss_pred             hhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEE
Confidence            46789999999999997422        49999987542  234456678899999999 899999999988654 5688


Q ss_pred             EEEecCCCCCHhHHHhhhc------------------------------------------------------------c
Q psy697           71 IVTSKCNGHTLYTNIHIYK------------------------------------------------------------E   90 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~------------------------------------------------------------~   90 (157)
                      +++||+++++|.+++....                                                            .
T Consensus        89 ~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (337)
T cd05054          89 VIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKE  168 (337)
T ss_pred             EEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhc
Confidence            9999999999999986421                                                            1


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           91 KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        91 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.
T Consensus       169 ~l~~~~~~~~~~qi~~----------------------aL~~lH~~~ivHrDikp~Nill~~~  209 (337)
T cd05054         169 PLTLEDLISYSFQVAR----------------------GMEFLASRKCIHRDLAARNILLSEN  209 (337)
T ss_pred             CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCcceEEEeCC
Confidence            4667777777776666                      8888999999999999999988754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.83  E-value=1.5e-19  Score=126.15  Aligned_cols=126  Identities=21%  Similarity=0.328  Sum_probs=106.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+....  .......+.+|+..+..++|||++++++.+......+++|||+++
T Consensus         9 ~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06641           9 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG   86 (277)
T ss_pred             heeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCC
Confidence            4679999999999998743   59999886542  234456788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++...  .+++..+..++.|++.                      ++.++|+++++|+|+++.|++....
T Consensus        87 ~~l~~~i~~~--~~~~~~~~~~~~~l~~----------------------~l~~lh~~~i~h~dl~p~Ni~i~~~  137 (277)
T cd06641          87 GSALDLLEPG--PLDETQIATILREILK----------------------GLDYLHSEKKIHRDIKAANVLLSEH  137 (277)
T ss_pred             CcHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHccCCeecCCCCHHhEEECCC
Confidence            9999998743  6889999889887777                      7777888899999999999887644

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.83  E-value=4.5e-20  Score=129.28  Aligned_cols=130  Identities=18%  Similarity=0.248  Sum_probs=108.5

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+.||+|+||.||++....   .+++|.+...  .+......+.+|+.++..++|||++++++.+...+.++++|||++
T Consensus         5 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (286)
T cd06622           5 VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMD   82 (286)
T ss_pred             hhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecC
Confidence            35789999999999999863   5999988754  234445678899999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhh--cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIY--KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...  ...+++..+..++.|++.                      +++++|+ .+++|+|+++.|++..+.+
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~LH~~~~i~H~dl~p~nil~~~~~  140 (286)
T cd06622          83 AGSLDKLYAGGVATEGIPEDVLRRITYAVVK----------------------GLKFLKEEHNIIHRDVKPTNVLVNGNG  140 (286)
T ss_pred             CCCHHHHHHhccccCCCCHHHHHHHHHHHHH----------------------HHHHHHhcCCEeeCCCCHHHEEECCCC
Confidence            99999988763  226889999999887777                      7777775 4899999999998887643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.83  E-value=1.5e-19  Score=126.48  Aligned_cols=127  Identities=23%  Similarity=0.328  Sum_probs=105.9

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||++....        .+++|.+..   ........+.+|+.++..++|+|++++++++......+++|
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   86 (280)
T cd05092          10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVF   86 (280)
T ss_pred             ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc---CCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEE
Confidence            5789999999999997421        378888765   34456678899999999999999999999999989999999


Q ss_pred             ecCCCCCHhHHHhhhc--------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccccc
Q psy697           74 SKCNGHTLYTNIHIYK--------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRIL  139 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~--------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~  139 (157)
                      ||+++++|.+++...+              ..+++..+..++.|++.                      +++++|+++++
T Consensus        87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------al~~LH~~~i~  144 (280)
T cd05092          87 EYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIAS----------------------GMVYLASLHFV  144 (280)
T ss_pred             ecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHH----------------------HHHHHHHCCee
Confidence            9999999999987643              13677888888887777                      77778888999


Q ss_pred             ccCCCCcccccccc
Q psy697          140 ARSPSHPLNLSRSA  153 (157)
Q Consensus       140 ~rd~k~~~~~~~~~  153 (157)
                      |||+|+.|++..+.
T Consensus       145 H~dlkp~nil~~~~  158 (280)
T cd05092         145 HRDLATRNCLVGQG  158 (280)
T ss_pred             cccccHhhEEEcCC
Confidence            99999999988754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG0660|consensus

Probab=99.83  E-value=2e-20  Score=130.14  Aligned_cols=129  Identities=17%  Similarity=0.182  Sum_probs=111.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-----CCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-----PPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~lv~   73 (157)
                      .+.||+|+||.|..+..+.   .||+|.+.... .+....+...+|+.+++.++|+||+.+.+.+..     -+.+|+|+
T Consensus        27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F-~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~  105 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPF-ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF  105 (359)
T ss_pred             cccccCcceeeEEEEEEcCCCCEeehhhhhhhh-hchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence            3679999999999999866   49999997555 566778888999999999999999999998876     25699999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |++ ..+|.+.++..+ .++...+..++.|+++                      +|.|+|+.+++|||+|+.|++..+.
T Consensus       106 elM-etDL~~iik~~~-~L~d~H~q~f~YQiLr----------------------gLKyiHSAnViHRDLKPsNll~n~~  161 (359)
T KOG0660|consen  106 ELM-ETDLHQIIKSQQ-DLTDDHAQYFLYQILR----------------------GLKYIHSANVIHRDLKPSNLLLNAD  161 (359)
T ss_pred             hHH-hhHHHHHHHcCc-cccHHHHHHHHHHHHH----------------------hcchhhcccccccccchhheeeccC
Confidence            999 569999998754 5999999999997777                      9999999999999999999998776


Q ss_pred             cC
Q psy697          154 ES  155 (157)
Q Consensus       154 ~~  155 (157)
                      -+
T Consensus       162 c~  163 (359)
T KOG0660|consen  162 CD  163 (359)
T ss_pred             CC
Confidence            44

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=3.8e-20  Score=137.29  Aligned_cols=121  Identities=17%  Similarity=0.219  Sum_probs=102.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+++|....         ..+.+|+++++.++|+||+++++++...+..+++||++. 
T Consensus       174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-  243 (461)
T PHA03211        174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-  243 (461)
T ss_pred             EEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence            4579999999999999865   488985432         124679999999999999999999999999999999995 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++......+++.++..++.|++.                      +|.++|+++|+|||+|+.|+|..+..
T Consensus       244 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~----------------------aL~yLH~~gIvHrDLKP~NILl~~~~  297 (461)
T PHA03211        244 SDLYTYLGARLRPLGLAQVTAVARQLLS----------------------AIDYIHGEGIIHRDIKTENVLVNGPE  297 (461)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEECcCCHHHEEECCCC
Confidence            6898888765446899999999998887                      88889999999999999999987644

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.83  E-value=1.7e-19  Score=125.98  Aligned_cols=127  Identities=23%  Similarity=0.333  Sum_probs=107.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+++|.+....  .......+.+|+.+++.+.|||++++++.+...+..+++|||+++
T Consensus         9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (277)
T cd06640           9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGG   86 (277)
T ss_pred             hhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCC
Confidence            4679999999999998754   59999987642  234567788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...  .+++.++..++.|++.                      +++++|.++++|+|+++.|++..+.+
T Consensus        87 ~~L~~~i~~~--~l~~~~~~~~~~~l~~----------------------~l~~lh~~~ivH~dl~p~Nil~~~~~  138 (277)
T cd06640          87 GSALDLLRAG--PFDEFQIATMLKEILK----------------------GLDYLHSEKKIHRDIKAANVLLSEQG  138 (277)
T ss_pred             CcHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCccCcCCChhhEEEcCCC
Confidence            9999998743  6888888888887777                      77778888999999999998887543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.83  E-value=7.1e-20  Score=132.29  Aligned_cols=126  Identities=19%  Similarity=0.214  Sum_probs=101.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC------ceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP------HLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv   72 (157)
                      .+.||+|+||.||++....   .+|+|.+.... ........+.+|+.++..++|||++++++++....      .++++
T Consensus        26 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv  104 (359)
T cd07876          26 LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLV  104 (359)
T ss_pred             EEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEE
Confidence            4679999999999998754   59999997643 33445667788999999999999999999886543      47999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++ ++.+.+..   .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus       105 ~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~----------------------~L~~LH~~~ivHrDlkp~NIl~~~  158 (359)
T cd07876         105 MELMDA-NLCQVIHM---ELDHERMSYLLYQMLC----------------------GIKHLHSAGIIHRDLKPSNIVVKS  158 (359)
T ss_pred             EeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCHHHEEECC
Confidence            999965 66666642   5788888888887777                      888889999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      .+
T Consensus       159 ~~  160 (359)
T cd07876         159 DC  160 (359)
T ss_pred             CC
Confidence            54

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.83  E-value=5.4e-20  Score=129.58  Aligned_cols=130  Identities=17%  Similarity=0.169  Sum_probs=108.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCC--CHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD--DEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+.||+|++|.||+|....   .+++|.+......  .......+..|+.++..++|+|++++++++...+..+++|||+
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   84 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM   84 (298)
T ss_pred             eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc
Confidence            5689999999999999754   5999999765321  1223456678999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                       +++|.+++......+++..+..++.|+++                      +|.++|+++++|+|+++.|++..+.+
T Consensus        85 -~~~L~~~i~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~~i~H~dl~p~nill~~~~  139 (298)
T cd07841          85 -ETDLEKVIKDKSIVLTPADIKSYMLMTLR----------------------GLEYLHSNWILHRDLKPNNLLIASDG  139 (298)
T ss_pred             -CCCHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeecCCChhhEEEcCCC
Confidence             89999999864436899999999887777                      77888888999999999999887654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.83  E-value=9.5e-20  Score=128.47  Aligned_cols=125  Identities=21%  Similarity=0.266  Sum_probs=106.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+....   ......+.+|+.+++.++|||++++++.+......+++|||+++
T Consensus        25 ~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~  101 (296)
T cd06654          25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (296)
T ss_pred             EEEecCCCCeEEEEEEECCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCC
Confidence            4579999999999998644   59999887643   23456788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++...  .+++.++..++.|++.                      +++++|.++++|||+++.|++....
T Consensus       102 ~~L~~~~~~~--~~~~~~~~~i~~ql~~----------------------aL~~LH~~gi~H~dLkp~Nill~~~  152 (296)
T cd06654         102 GSLTDVVTET--CMDEGQIAAVCRECLQ----------------------ALEFLHSNQVIHRDIKSDNILLGMD  152 (296)
T ss_pred             CCHHHHHHhc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEEcCC
Confidence            9999998643  5788888888887777                      7778888899999999999888543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.83  E-value=1.5e-19  Score=126.44  Aligned_cols=123  Identities=22%  Similarity=0.243  Sum_probs=103.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+++|.+...  ......+.+.+|+.++..++|||++++++.+...+..+++|||+++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   83 (279)
T cd06619           6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLD--ITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDG   83 (279)
T ss_pred             eeeeccCCCeEEEEEEEcCCCcEEEEEEEecC--CChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCC
Confidence            5789999999999998754   4999998764  2344566788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|..+.     .+++..+..++.|++.                      +++++|+.+++|+|+|+.|++....
T Consensus        84 ~~l~~~~-----~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlkp~Nill~~~  131 (279)
T cd06619          84 GSLDVYR-----KIPEHVLGRIAVAVVK----------------------GLTYLWSLKILHRDVKPSNMLVNTR  131 (279)
T ss_pred             CChHHhh-----cCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeeCCCCHHHEEECCC
Confidence            9986542     4678888888887666                      7788888899999999999888654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.83  E-value=9.1e-20  Score=125.62  Aligned_cols=129  Identities=21%  Similarity=0.180  Sum_probs=109.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+.... ........+.+|+.+++.++|||++++++.+...+..++++||+++
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd08220           5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQ-MTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPG   83 (256)
T ss_pred             EEEecccCceEEEEEEEcCCCcEEEEEEEeccc-cccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCC
Confidence            4679999999999998754   49999997654 3344567888999999999999999999999888999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++.... ..+++..+..++.+++.                      +++++|+++++|+|+++.|++....
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lh~~~i~h~dl~~~nil~~~~  137 (256)
T cd08220          84 GTLAEYIQKRCNSLLDEDTILHFFVQILL----------------------ALHHVHTKLILHRDLKTQNILLDKH  137 (256)
T ss_pred             CCHHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEcCC
Confidence            99999998743 24888888888887777                      7788888899999999999887543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.83  E-value=3e-20  Score=134.22  Aligned_cols=121  Identities=16%  Similarity=0.224  Sum_probs=102.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|......         ...|+.++..++|||++++++++...+..++++|++. 
T Consensus        71 ~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-  140 (357)
T PHA03209         71 IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT---------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-  140 (357)
T ss_pred             EEEecCCCCeEEEEEEECCCCceEEEEeCCccc---------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-
Confidence            4689999999999999865   48899754421         2458889999999999999999999999999999995 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++......+++..+..++.|++.                      +|.++|.++++|||+|+.|++.....
T Consensus       141 ~~l~~~l~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrDlkp~Nill~~~~  194 (357)
T PHA03209        141 SDLYTYLTKRSRPLPIDQALIIEKQILE----------------------GLRYLHAQRIIHRDVKTENIFINDVD  194 (357)
T ss_pred             CcHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEECCCC
Confidence            6888888765557899999999998888                      78888999999999999999987644

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.83  E-value=1.3e-19  Score=128.21  Aligned_cols=127  Identities=27%  Similarity=0.414  Sum_probs=104.7

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||++.+..       .+++|.+....  .......+.+|+.++..++|||++++++.+... ..++++|
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e   88 (303)
T cd05110          12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQ   88 (303)
T ss_pred             ccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeeh
Confidence            4679999999999998743       26888887542  334445688899999999999999999988654 4678999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+++|+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus        89 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~L~~LH~~~ivH~dikp~Nill~~~  145 (303)
T cd05110          89 LMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAK----------------------GMMYLEERRLVHRDLAARNVLVKSP  145 (303)
T ss_pred             hcCCCCHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHhhcCeeccccccceeeecCC
Confidence            99999999999875546888888888887777                      7888899999999999999988653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.83  E-value=5.7e-20  Score=129.07  Aligned_cols=128  Identities=19%  Similarity=0.218  Sum_probs=105.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+....  .......+.+|+.+++.++|||++++++++......+++|||+.+
T Consensus        10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (291)
T cd07844          10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEH--EEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT   87 (291)
T ss_pred             EEEEeecCCeEEEEEEEcCCCcEEEEEEEeccc--ccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC
Confidence            4679999999999998754   49999987542  112233466899999999999999999999999999999999974


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                       +|.+++......+++..+..++.|++.                      +|.++|+++++|||+++.|++..+..
T Consensus        88 -~L~~~~~~~~~~~~~~~~~~~~~ql~~----------------------al~~lH~~~i~H~dl~p~nil~~~~~  140 (291)
T cd07844          88 -DLKQYMDDCGGGLSMHNVRLFLFQLLR----------------------GLAYCHQRRVLHRDLKPQNLLISERG  140 (291)
T ss_pred             -CHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecccCCHHHEEEcCCC
Confidence             999988765546888999888887777                      77778888999999999998886543

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.3e-19  Score=125.26  Aligned_cols=129  Identities=18%  Similarity=0.140  Sum_probs=101.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHH-HhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTF-RKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|....   .+|+|.++............+..|...+ ...+|+|++++++.+...+.+++++||++
T Consensus         1 ~~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (260)
T cd05611           1 LKPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN   80 (260)
T ss_pred             CccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence            3679999999999998754   5999998764322222223344444443 44589999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++|.++++..+ .+++..+..++.|++.                      +|.++|+.+++|+|+++.|++....
T Consensus        81 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------aL~~lH~~~i~H~dl~p~nil~~~~  133 (260)
T cd05611          81 GGDCASLIKTLG-GLPEDWAKQYIAEVVL----------------------GVEDLHQRGIIHRDIKPENLLIDQT  133 (260)
T ss_pred             CCCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHeEECCC
Confidence            999999998655 6899999999887777                      7777888889999999999887654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.83  E-value=5.1e-20  Score=127.22  Aligned_cols=127  Identities=17%  Similarity=0.140  Sum_probs=109.3

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      ||+|+||.||++....   .+++|.+.............+.+|+..+..++|||++++++.+......++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999864   5999998765433335567788999999999999999999999999999999999999999


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+++...+ .+++..+..++.|++.                      +|.++|+++++|+|+++.|++..+.+
T Consensus        81 ~~~l~~~~-~~~~~~~~~i~~qi~~----------------------~L~~lH~~~i~H~di~~~nil~~~~~  130 (265)
T cd05579          81 ASLLENVG-SLDEDVARIYIAEIVL----------------------ALEYLHSNGIIHRDLKPDNILIDSNG  130 (265)
T ss_pred             HHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHcCeecCCCCHHHeEEcCCC
Confidence            99998755 7899999999987777                      78888999999999999999887654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.83  E-value=1.2e-19  Score=126.27  Aligned_cols=129  Identities=24%  Similarity=0.316  Sum_probs=105.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCC-------HHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDD-------EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   71 (157)
                      .+.||+|+||.||+|....   .+++|.+.......       ....+.+..|+..+..++|||++++++.+...+..++
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   85 (272)
T cd06629           6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSI   85 (272)
T ss_pred             cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEE
Confidence            5789999999999998643   49999875421100       1123467789999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           72 VTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      ++||+++++|.++++..+ .+++..+..++.|++.                      ++.++|+++++|+|+++.|++..
T Consensus        86 v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~~~nil~~  142 (272)
T cd06629          86 FLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLE----------------------GLAYLHSKGILHRDLKADNLLVD  142 (272)
T ss_pred             EEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHH----------------------HHHHHhhCCeeecCCChhhEEEc
Confidence            999999999999998764 7889888888887777                      77778888999999999998876


Q ss_pred             cc
Q psy697          152 SA  153 (157)
Q Consensus       152 ~~  153 (157)
                      +.
T Consensus       143 ~~  144 (272)
T cd06629         143 AD  144 (272)
T ss_pred             CC
Confidence            43

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.83  E-value=7.5e-20  Score=127.01  Aligned_cols=128  Identities=20%  Similarity=0.324  Sum_probs=105.9

Q ss_pred             CccccCceeeEEEEEEec---------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            3 DRIGKGHFGTVYNGNWHG---------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      +.||+|+||.||++....         .+++|.+...  ........+.+|+..++.++||||+++++++......+++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG--ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM   78 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcc--cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence            468999999999998742         3788887653  22344667889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           74 SKCNGHTLYTNIHIYK------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ||+++++|.+++....      ..+++.++..++.|++.                      +++++|+++++|+|+++.|
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lH~~~i~H~dl~p~n  136 (269)
T cd05044          79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAK----------------------GCVYLEQMHFIHRDLAARN  136 (269)
T ss_pred             eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCChhe
Confidence            9999999999997531      23677888888887777                      8888999999999999999


Q ss_pred             ccccccc
Q psy697          148 NLSRSAE  154 (157)
Q Consensus       148 ~~~~~~~  154 (157)
                      ++..+.+
T Consensus       137 il~~~~~  143 (269)
T cd05044         137 CLVSEKG  143 (269)
T ss_pred             EEEecCC
Confidence            9887644

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0612|consensus

Probab=99.83  E-value=1.9e-21  Score=151.00  Aligned_cols=131  Identities=18%  Similarity=0.135  Sum_probs=115.6

Q ss_pred             CCCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +++.||+|+||.|.+++++++   ||+|+++++.........-|..|-.+|...+.+.|++++-+|.+..++|+||||++
T Consensus        79 ilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~p  158 (1317)
T KOG0612|consen   79 ILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMP  158 (1317)
T ss_pred             HHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEeccc
Confidence            357899999999999999773   99999998654445566778889999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ||+|..++.+.. .+++..+..+...++.                      +|+.+|+-|.||||+||.|+|....+
T Consensus       159 GGDlltLlSk~~-~~pE~~ArFY~aEiVl----------------------AldslH~mgyVHRDiKPDNvLld~~G  212 (1317)
T KOG0612|consen  159 GGDLLTLLSKFD-RLPEDWARFYTAEIVL----------------------ALDSLHSMGYVHRDIKPDNVLLDKSG  212 (1317)
T ss_pred             CchHHHHHhhcC-CChHHHHHHHHHHHHH----------------------HHHHHHhccceeccCCcceeEecccC
Confidence            999999999887 7999999999885444                      99999999999999999999987654

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.83  E-value=1.6e-19  Score=124.95  Aligned_cols=129  Identities=23%  Similarity=0.307  Sum_probs=110.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+.... ......+.+..|+.+++.++|+|++++++.+...+.+++++||+++
T Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (264)
T cd06626           5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQD-NDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSG   83 (264)
T ss_pred             eeEeecCCCcEEEEEEECCCCcEEEEEEEECcc-cchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCC
Confidence            5789999999999998743   59999987654 3345678899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... .+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+..
T Consensus        84 ~~L~~~~~~~~-~~~~~~~~~i~~~i~~----------------------~l~~lh~~~i~H~dl~~~nil~~~~~  136 (264)
T cd06626          84 GTLEELLEHGR-ILDEHVIRVYTLQLLE----------------------GLAYLHSHGIVHRDIKPANIFLDHNG  136 (264)
T ss_pred             CcHHHHHhhcC-CCChHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEECCCC
Confidence            99999998654 5788888888887777                      77788888999999999998887643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.83  E-value=1.3e-19  Score=127.02  Aligned_cols=127  Identities=17%  Similarity=0.189  Sum_probs=106.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+...  ........+.+|+.++..++|||++++++.+...+..++++||+++
T Consensus        10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (284)
T cd06620          10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIG--AKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDC   87 (284)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEec--CcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCC
Confidence            4689999999999999854   4899988654  2344567788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++...+ .+++..+..++.+++.                      ++.++|+ .+++|||+++.|++....
T Consensus        88 ~~L~~~~~~~~-~~~~~~~~~~~~~i~~----------------------~l~~LH~~~~i~H~dl~p~nil~~~~  140 (284)
T cd06620          88 GSLDRIYKKGG-PIPVEILGKIAVAVVE----------------------GLTYLYNVHRIMHRDIKPSNILVNSR  140 (284)
T ss_pred             CCHHHHHHhcc-CCCHHHHHHHHHHHHH----------------------HHHHHHHhcCeeccCCCHHHEEECCC
Confidence            99999988754 6899999999888777                      6666775 478999999998887643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.83  E-value=2.2e-19  Score=124.57  Aligned_cols=129  Identities=25%  Similarity=0.347  Sum_probs=105.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCC--CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL--DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e   74 (157)
                      .+.||+|+||.||.+....   .+++|.+.....  ......+.+.+|+.++..+.|||++++++++...  ..++++||
T Consensus         7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e   86 (265)
T cd06652           7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME   86 (265)
T ss_pred             eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence            5789999999999998755   499998864321  1223456788899999999999999999988664  46789999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+++++|.+++.... .+++.....++.|++.                      +|+++|+++++|+|+++.|++..+.
T Consensus        87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~----------------------~l~~lH~~~i~H~dl~p~nil~~~~  142 (265)
T cd06652          87 HMPGGSIKDQLKSYG-ALTENVTRKYTRQILE----------------------GVSYLHSNMIVHRDIKGANILRDSV  142 (265)
T ss_pred             ecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEecCCCCHHHEEecCC
Confidence            999999999988654 6788888888887777                      7777888899999999999887654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.83  E-value=2e-19  Score=126.18  Aligned_cols=128  Identities=19%  Similarity=0.292  Sum_probs=105.3

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||++....        .+++|.+...  ........+.+|+.++..++|||++++++++......++++
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~   87 (288)
T cd05050          10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLF   87 (288)
T ss_pred             cccccccccccEEEEEEcccCCCCcceeEEEEecCCC--cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEE
Confidence            5689999999999998632        4899988754  33445667889999999999999999999999888999999


Q ss_pred             ecCCCCCHhHHHhhhc---------------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhc
Q psy697           74 SKCNGHTLYTNIHIYK---------------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEK  132 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~---------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~  132 (157)
                      ||+++|+|.+++....                     ..+++..+..++.|++.                      +|++
T Consensus        88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~----------------------aL~~  145 (288)
T cd05050          88 EYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA----------------------GMAY  145 (288)
T ss_pred             ecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHH----------------------HHHH
Confidence            9999999999997532                     13567777788887776                      7778


Q ss_pred             cccccccccCCCCcccccccc
Q psy697          133 LPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       133 ~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|+++++|||+++.|++....
T Consensus       146 lH~~~i~H~dl~p~nil~~~~  166 (288)
T cd05050         146 LSERKFVHRDLATRNCLVGEN  166 (288)
T ss_pred             HHhCCeecccccHhheEecCC
Confidence            888899999999999887654

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.83  E-value=3.2e-20  Score=129.89  Aligned_cols=129  Identities=20%  Similarity=0.268  Sum_probs=106.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+++|.++... ........+.+|+.+++.++|||++++++.+.....+++++||++ 
T Consensus         5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-   82 (284)
T cd07839           5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-   82 (284)
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeeccc-ccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-
Confidence            4679999999999999854   49999987543 222334567789999999999999999999999999999999996 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+..+++..+..++.|+++                      +|.++|+++++|||+++.|++..+.+
T Consensus        83 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~LH~~~i~H~dl~~~nil~~~~~  136 (284)
T cd07839          83 QDLKKYFDSCNGDIDPEIVKSFMFQLLK----------------------GLAFCHSHNVLHRDLKPQNLLINKNG  136 (284)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEecCCCCHHHEEEcCCC
Confidence            5888887765557899999999998877                      77778888999999999998876544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.83  E-value=9.6e-20  Score=127.13  Aligned_cols=125  Identities=24%  Similarity=0.354  Sum_probs=106.1

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||+|....   .+++|.+....  .....+.+.+|+.+++.++|||++++++.+...+..++++||++++
T Consensus        10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (277)
T cd06642          10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGG   87 (277)
T ss_pred             HHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCC
Confidence            578999999999998754   48999887542  2345667889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.+++...  .+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+.
T Consensus        88 ~L~~~~~~~--~~~~~~~~~~~~~i~~----------------------~l~~lH~~~ivH~dl~p~ni~i~~~  137 (277)
T cd06642          88 SALDLLKPG--PLEETYIATILREILK----------------------GLDYLHSERKIHRDIKAANVLLSEQ  137 (277)
T ss_pred             cHHHHhhcC--CCCHHHHHHHHHHHHH----------------------HHHHHhcCCeeccCCChheEEEeCC
Confidence            999988642  6888888888887777                      7777888899999999999887654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.83  E-value=1.4e-19  Score=125.50  Aligned_cols=126  Identities=25%  Similarity=0.357  Sum_probs=103.4

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.+.||+|+||.||+|.+.+  .+++|.+.... .   ....+..|+.++..++|||++++++.+. ....+++|||+++
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~   84 (262)
T cd05071          10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-M---SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSK   84 (262)
T ss_pred             EeeecCCCCCCcEEEEEecCCceEEEEecccCc-c---CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCC
Confidence            35789999999999998755  49999987543 1   2346788999999999999999998764 4567999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+++.|++....
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------aL~~lH~~~i~H~dl~p~Nill~~~  138 (262)
T cd05071          85 GSLLDFLKGEMGKYLRLPQLVDMAAQIAS----------------------GMAYVERMNYVHRDLRAANILVGEN  138 (262)
T ss_pred             CcHHHHHhhccccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccccCcccEEEcCC
Confidence            99999998642 24788888888887777                      7778888899999999999887653

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG1025|consensus

Probab=99.83  E-value=6.7e-21  Score=144.46  Aligned_cols=128  Identities=26%  Similarity=0.358  Sum_probs=113.4

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .++||+|+||+||+|.+-.       +||+|++...  ...+....+..|...|.++.|||++++.+.+..+. +.|+++
T Consensus       701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            4789999999999999833       5999999765  34456778999999999999999999999998876 789999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++.|+|.++++.++..+.....+.++.|||+                      ++.|+++++.+|||+...|+|+++-+
T Consensus       778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAk----------------------gM~YLe~qrlVHrdLaaRNVLVksP~  835 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAK----------------------GMKYLEEQRLVHRDLAARNVLVKSPN  835 (1177)
T ss_pred             hcccchHHHHHHHhhccccHHHHHHHHHHHHH----------------------HHHHHHhcchhhhhhhhhheeecCCC
Confidence            99999999999998878999999999999999                      77788899999999999999998754

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.82  E-value=2.2e-19  Score=123.73  Aligned_cols=128  Identities=23%  Similarity=0.320  Sum_probs=107.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCC--CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL--DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+.||+|++|.||+|....   .+++|.+.....  ......+.+.+|+.+++.++|+|++++++.+.....+++++||+
T Consensus         5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   84 (258)
T cd06632           5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELV   84 (258)
T ss_pred             cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEec
Confidence            5789999999999998863   599998865321  12345567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++++|.+++.... .+++..+..++.|++.                      ++.++|+.+++|+|+++.|++..+
T Consensus        85 ~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~~~ni~~~~  137 (258)
T cd06632          85 PGGSLAKLLKKYG-SFPEPVIRLYTRQILL----------------------GLEYLHDRNTVHRDIKGANILVDT  137 (258)
T ss_pred             CCCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEECC
Confidence            9999999998654 6889988888887777                      777788888999999999988754

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.82  E-value=1.6e-19  Score=126.76  Aligned_cols=130  Identities=22%  Similarity=0.261  Sum_probs=99.7

Q ss_pred             CCCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc---CCCceeeeeeEEec-----CCc
Q psy697            1 MGDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT---RHENLVLFMGACMK-----PPH   68 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~~   68 (157)
                      +.+.||+|+||.||+|....    .+|+|.+.... ........+.+|+.++..+   +|||++++++++..     ...
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~   83 (290)
T cd07862           5 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-GEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK   83 (290)
T ss_pred             eeeEeccCCCeEEEEEEEcCCCCeEEEEEEEeccc-CCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCc
Confidence            35789999999999998732    38999887543 2222233455666666554   79999999998853     356


Q ss_pred             eEEEEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           69 LAIVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        69 ~~lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ++++|||+. ++|.+++.... ..+++..+..++.|++.                      +|.++|+++++|||+|+.|
T Consensus        84 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~lH~~~iiH~dlkp~N  140 (290)
T cd07862          84 LTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLR----------------------GLDFLHSHRVVHRDLKPQN  140 (290)
T ss_pred             EEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeCCCCHHH
Confidence            899999996 68999887632 35888999999888777                      7788888899999999999


Q ss_pred             ccccccc
Q psy697          148 NLSRSAE  154 (157)
Q Consensus       148 ~~~~~~~  154 (157)
                      ++..+..
T Consensus       141 il~~~~~  147 (290)
T cd07862         141 ILVTSSG  147 (290)
T ss_pred             EEEcCCC
Confidence            9986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0667|consensus

Probab=99.82  E-value=6.3e-20  Score=135.72  Aligned_cols=127  Identities=23%  Similarity=0.264  Sum_probs=110.1

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-C-----CceeeeeeEEecCCceEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-H-----ENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~~l   71 (157)
                      +.+.||+|+||+|.+|.+..   .||+|+++.    ......+...|+.+|..++ |     -|+|+++++|...++++|
T Consensus       190 V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN----~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  190 VLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN----KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEecccccceeEEEEecCCCcEEEEEeecc----ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            35789999999999999876   399999984    4567778888999999996 4     399999999999999999


Q ss_pred             EEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           72 VTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      |+|.++. +|+++++.++ ..++...+..++.||+.                      +|..||+.+|||.||||+|+|.
T Consensus       266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~----------------------~L~~L~~l~IIHcDLKPENILL  322 (586)
T KOG0667|consen  266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILT----------------------ALLFLHELGIIHCDLKPENILL  322 (586)
T ss_pred             eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeccCChhheee
Confidence            9999954 9999999864 35889999999887777                      8888999999999999999998


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      ....
T Consensus       323 ~~~~  326 (586)
T KOG0667|consen  323 KDPK  326 (586)
T ss_pred             ccCC
Confidence            8764

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.82  E-value=1.7e-19  Score=124.81  Aligned_cols=127  Identities=23%  Similarity=0.358  Sum_probs=104.9

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.++||+|+||.||+|....  .+++|.+....    .....+.+|+.+++.++|||++++++.+ ..+..+++|||+++
T Consensus        10 ~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~   84 (260)
T cd05067          10 LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS----MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMEN   84 (260)
T ss_pred             eeeeeccCccceEEeeecCCCceEEEEEecCCC----CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCC
Confidence            35789999999999998755  59999987643    1235678899999999999999999876 45668999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... ..+++.++..++.|++.                      +|+++|+.+++|||+++.|++..+..
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~----------------------al~~LH~~~i~H~dl~p~ni~i~~~~  139 (260)
T cd05067          85 GSLVDFLKTPEGIKLTINKLIDMAAQIAE----------------------GMAFIERKNYIHRDLRAANILVSETL  139 (260)
T ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHhcCCeecccccHHhEEEcCCC
Confidence            99999987533 35788888888887777                      88888999999999999998887643

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG4278|consensus

Probab=99.82  E-value=1.4e-20  Score=139.62  Aligned_cols=126  Identities=28%  Similarity=0.441  Sum_probs=108.1

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+||-|.||.||.|.|++   ++|||.++.+    .-..+.|+.|..+|+.++|||+|++.|.|.....+||++|||..|
T Consensus       273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yG  348 (1157)
T KOG4278|consen  273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYG  348 (1157)
T ss_pred             eccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCc
Confidence            579999999999999988   6999999753    345788999999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++++.. ..++.-..+.++.||+.                      +++|+-.+++||||+.+.|-|+.+..
T Consensus       349 NLLdYLRecnr~ev~avvLlyMAtQIsS----------------------aMeYLEkknFIHRDLAARNCLVgEnh  402 (1157)
T KOG4278|consen  349 NLLDYLRECNRSEVPAVVLLYMATQISS----------------------AMEYLEKKNFIHRDLAARNCLVGENH  402 (1157)
T ss_pred             cHHHHHHHhchhhcchhHHHHHHHHHHH----------------------HHHHHHHhhhhhhhhhhhhccccccc
Confidence            9999999853 34666667777887777                      77778888899999988887766543

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.82  E-value=4.9e-20  Score=128.97  Aligned_cols=129  Identities=19%  Similarity=0.172  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+.+   .+++|.+.... ........+.+|+.++..++|||++++++++...+..++++||+++
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   84 (286)
T cd07846           6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESE-DDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDH   84 (286)
T ss_pred             eeeeccCCCeEEEEEEECCCCCEEEEEeHhhcc-CcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCc
Confidence            5789999999999999854   59999886643 2223456678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|..+..... .+++.++..++.|++.                      ++.++|+++++|+|+++.|++..+..
T Consensus        85 ~~l~~~~~~~~-~~~~~~~~~~~~~i~~----------------------~l~~LH~~~i~h~~l~p~ni~~~~~~  137 (286)
T cd07846          85 TVLDDLEKYPN-GLDESRVRKYLFQILR----------------------GIEFCHSHNIIHRDIKPENILVSQSG  137 (286)
T ss_pred             cHHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCCHHHEEECCCC
Confidence            98888776543 5899999999998777                      77778888999999999998886643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.82  E-value=3.5e-19  Score=126.13  Aligned_cols=130  Identities=19%  Similarity=0.256  Sum_probs=107.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+...........+.+.+|+.++..++|||++++.+++...+..++++||+. 
T Consensus        20 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-   98 (307)
T cd06607          20 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-   98 (307)
T ss_pred             heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-
Confidence            4679999999999998753   599998875432344556678899999999999999999999999999999999996 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++.+++......+++..+..++.|++.                      +|.++|..+++|+|+++.|++.....
T Consensus        99 g~l~~~~~~~~~~l~~~~~~~~~~ql~~----------------------~L~~LH~~~i~H~dl~p~nIl~~~~~  152 (307)
T cd06607          99 GSASDILEVHKKPLQEVEIAAICHGALQ----------------------GLAYLHSHERIHRDIKAGNILLTEPG  152 (307)
T ss_pred             CCHHHHHHHcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCceecCCCcccEEECCCC
Confidence            5777777654447899999888887777                      77788888999999999998886543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.82  E-value=2.6e-19  Score=123.56  Aligned_cols=126  Identities=26%  Similarity=0.360  Sum_probs=105.2

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++...+ .+++|.+...     ...+.+.+|+.+++.++|+|++++++++.. .+..++++||++++
T Consensus        11 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~   85 (256)
T cd05082          11 LQTIGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   85 (256)
T ss_pred             eeeecccCCCeEEEEEEcCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCC
Confidence            5789999999999998876 5899988642     234568899999999999999999997654 46789999999999


Q ss_pred             CHhHHHhhhcc-cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKE-KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.++++..+. .+++..+..++.|++.                      +++++|+++++|||+|+.|++.....
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlkp~nil~~~~~  139 (256)
T cd05082          86 SLVDYLRSRGRSVLGGDCLLKFSLDVCE----------------------AMEYLEANNFVHRDLAARNVLVSEDN  139 (256)
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeccccchheEEEcCCC
Confidence            99999986542 4788888888887777                      88889999999999999999886543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.82  E-value=2.3e-19  Score=124.08  Aligned_cols=126  Identities=23%  Similarity=0.366  Sum_probs=104.7

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.+.||+|+||.||++....  .+++|.+.... .   ..+.+.+|+.++++++|+|++++++.+. ....+++|||+++
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~   84 (260)
T cd05070          10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-M---SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSK   84 (260)
T ss_pred             hhheeccccCceEEEEEecCCceeEEEEecCCC-C---CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCC
Confidence            35789999999999998754  48999987643 2   2356889999999999999999998874 4568899999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++.... ..+++..+..++.|++.                      +++++|+++++|||+++.|++..+.
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------al~~lH~~~i~H~di~p~Nili~~~  138 (260)
T cd05070          85 GSLLDFLKDGEGRALKLPNLVDMAAQVAA----------------------GMAYIERMNYIHRDLRSANILVGDG  138 (260)
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCccceEEEeCC
Confidence            99999997643 25888899999887777                      7888899999999999999888654

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.82  E-value=2.5e-19  Score=123.59  Aligned_cols=130  Identities=22%  Similarity=0.310  Sum_probs=109.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.+|.+....   .+++|.+.... ........+.+|+..+++++|||++++.+++...+..++++||+++
T Consensus         5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd08218           5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISK-MSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEG   83 (256)
T ss_pred             EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHh-CChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCC
Confidence            4689999999999998754   49999987643 2334556788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+.+.... ..+++.++..++.|++.                      ++.++|+++++|+|+++.|++..+.+
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lh~~~i~h~~l~~~nil~~~~~  138 (256)
T cd08218          84 GDLYKKINAQRGVLFPEDQILDWFVQICL----------------------ALKHVHDRKILHRDIKSQNIFLTKDG  138 (256)
T ss_pred             CcHHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEecCCCCHHHEEEcCCC
Confidence            99999987643 25788889999888777                      77778888999999999998876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.82  E-value=5.6e-19  Score=125.66  Aligned_cols=129  Identities=19%  Similarity=0.272  Sum_probs=107.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+.............+.+|+..++.++|||++++++++......+++|||+. 
T Consensus        30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-  108 (317)
T cd06635          30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-  108 (317)
T ss_pred             hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-
Confidence            3579999999999998754   499999876533344556678899999999999999999999999999999999996 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |++.+.+......+++.++..++.|++.                      ++.++|.++++|||+++.|++....
T Consensus       109 g~l~~~~~~~~~~l~~~~~~~i~~~i~~----------------------~l~~lH~~~i~H~dL~p~Nil~~~~  161 (317)
T cd06635         109 GSASDLLEVHKKPLQEVEIAAITHGALQ----------------------GLAYLHSHNMIHRDIKAGNILLTEP  161 (317)
T ss_pred             CCHHHHHHHhcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCcccEEECCC
Confidence            5788877665557899999999888877                      7777888889999999999888653

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.82  E-value=3.1e-19  Score=123.49  Aligned_cols=125  Identities=22%  Similarity=0.335  Sum_probs=104.2

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++...+  .+++|.+...    ....+.+.+|+.+++.++|+|++++++.+.. ...+++|||++++
T Consensus        11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~   85 (260)
T cd05073          11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKG   85 (260)
T ss_pred             EeEecCccceEEEEEEecCCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCC
Confidence            5789999999999998654  4899987642    2345678899999999999999999998877 7789999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.+++.... ..+++..+..++.|++.                      +|+++|+++++|+|+++.|++....
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------aL~~lH~~~i~H~dl~p~ni~i~~~  138 (260)
T cd05073          86 SLLDFLKSDEGSKQPLPKLIDFSAQIAE----------------------GMAFIEQRNYIHRDLRAANILVSAS  138 (260)
T ss_pred             cHHHHHHhCCccccCHHHHHHHHHHHHH----------------------HHHHHHhCCccccccCcceEEEcCC
Confidence            9999997642 34778888888887777                      7888888899999999999887543

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.82  E-value=1.3e-19  Score=128.71  Aligned_cols=122  Identities=17%  Similarity=0.271  Sum_probs=98.1

Q ss_pred             CCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e   74 (157)
                      +++||+|+||.||+|....     .+|+|.+....     ......+|+.+++.++|||++++++.+..  ...+++++|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD   80 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence            4689999999999998643     48999987542     12346789999999999999999998865  456899999


Q ss_pred             cCCCCCHhHHHhhhc--------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCc
Q psy697           75 KCNGHTLYTNIHIYK--------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP  146 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~  146 (157)
                      |+. ++|.+++....        ..+++..+..++.|++.                      +|+++|+++++|||+|+.
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------al~~LH~~~ivHrDlkp~  137 (317)
T cd07868          81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD----------------------GIHYLHANWVLHRDLKPA  137 (317)
T ss_pred             ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEcCCCCHH
Confidence            985 58888876321        24788888888887777                      888899999999999999


Q ss_pred             ccccc
Q psy697          147 LNLSR  151 (157)
Q Consensus       147 ~~~~~  151 (157)
                      |++..
T Consensus       138 Nil~~  142 (317)
T cd07868         138 NILVM  142 (317)
T ss_pred             HEEEe
Confidence            99873

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.82  E-value=2.1e-19  Score=124.47  Aligned_cols=129  Identities=18%  Similarity=0.220  Sum_probs=110.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++..+.   .+++|.+....  .......+.+|+..++.++|||++++++.+...+.+++++||+++
T Consensus         6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (265)
T cd06605           6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDG   83 (265)
T ss_pred             HHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCC
Confidence            4679999999999999864   49999987753  345567788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++......+++..+..++.|++.                      +++++|+ .+++|+|+++.|++.....
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lH~~~~i~H~dl~~~ni~~~~~~  138 (265)
T cd06605          84 GSLDKILKEVQGRIPERILGKIAVAVLK----------------------GLTYLHEKHKIIHRDVKPSNILVNSRG  138 (265)
T ss_pred             CcHHHHHHHccCCCCHHHHHHHHHHHHH----------------------HHHHHcCCCCeecCCCCHHHEEECCCC
Confidence            9999999876447889988888887777                      7777888 8999999999998887643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.82  E-value=5.3e-19  Score=122.23  Aligned_cols=128  Identities=24%  Similarity=0.274  Sum_probs=111.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+....  .......+.+|+..+..++|+|++++++.+...+..++++||+++
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG--DEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDG   83 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc--chHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCC
Confidence            5789999999999999865   49999987653  225567889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... .+++..+..++.|++.                      +++++|+ ++++|+|+++.|++....+
T Consensus        84 ~~L~~~l~~~~-~l~~~~~~~~~~~l~~----------------------~l~~lh~~~~~~H~~l~~~ni~~~~~~  137 (264)
T cd06623          84 GSLADLLKKVG-KIPEPVLAYIARQILK----------------------GLDYLHTKRHIIHRDIKPSNLLINSKG  137 (264)
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHhccCCCccCCCCHHHEEECCCC
Confidence            99999998754 7899999999998888                      7778888 8999999999998887654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=3.5e-19  Score=124.05  Aligned_cols=127  Identities=23%  Similarity=0.310  Sum_probs=108.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||.|++|.||++....   .+++|.+....  .......+.+|+.+++.++|+|++++.+.+.....+++++||+++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   83 (274)
T cd06609           6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGG   83 (274)
T ss_pred             hhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCC
Confidence            4689999999999999754   49999987642  234456788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...  .+++..+..++.|++.                      ++.++|.++++|+|+++.|++..+..
T Consensus        84 ~~L~~~~~~~--~~~~~~~~~~~~ql~~----------------------~l~~lh~~~i~h~dl~p~ni~i~~~~  135 (274)
T cd06609          84 GSCLDLLKPG--KLDETYIAFILREVLL----------------------GLEYLHEEGKIHRDIKAANILLSEEG  135 (274)
T ss_pred             CcHHHHHhhc--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCHHHEEECCCC
Confidence            9999999864  6899999999888777                      77778888999999999998877643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.82  E-value=9.9e-20  Score=133.03  Aligned_cols=121  Identities=18%  Similarity=0.248  Sum_probs=101.5

Q ss_pred             CCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+.||+|+||.||++...+     .+++|.+...        ....+|+.+++.++|||++++++.+......+++||++
T Consensus        97 ~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~  168 (392)
T PHA03207         97 LSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKY  168 (392)
T ss_pred             EEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhc
Confidence            4679999999999997643     4888887542        12457999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      . ++|.+++...+ .+++..+..++.|++.                      +|+++|.++|+|||+|+.|++.....
T Consensus       169 ~-~~l~~~l~~~~-~l~~~~~~~i~~ql~~----------------------aL~~LH~~givHrDlkp~Nill~~~~  222 (392)
T PHA03207        169 K-CDLFTYVDRSG-PLPLEQAITIQRRLLE----------------------ALAYLHGRGIIHRDVKTENIFLDEPE  222 (392)
T ss_pred             C-CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCCHHHEEEcCCC
Confidence            5 68988885443 7999999999998777                      88888999999999999999887654

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.82  E-value=1.2e-19  Score=130.41  Aligned_cols=127  Identities=17%  Similarity=0.190  Sum_probs=102.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ........+.+|+.+++.++||||+++++++...      ...+++
T Consensus        20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   98 (343)
T cd07878          20 LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV   98 (343)
T ss_pred             heecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEE
Confidence            5689999999999998754   49999987643 2223455677899999999999999999887543      357899


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++++ +++|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus        99 ~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrdikp~Nil~~~  153 (343)
T cd07878          99 TNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLR----------------------GLKYIHSAGIIHRDLKPSNVAVNE  153 (343)
T ss_pred             eecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecccCChhhEEECC
Confidence            9988 77998887643  6899999999998777                      778888889999999999998865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       154 ~~  155 (343)
T cd07878         154 DC  155 (343)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.82  E-value=1.5e-19  Score=127.32  Aligned_cols=124  Identities=23%  Similarity=0.265  Sum_probs=105.9

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ..||+|+||.||++....   .+++|.+..   ........+.+|+..++.++|||++++++.+...+..+++|||++++
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~  104 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDL---RKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG  104 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEec---chHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence            568999999999998743   599998865   33445667889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.+++...  .+++..+..++.|++.                      +++++|+++++|||+++.|++....
T Consensus       105 ~L~~~~~~~--~l~~~~~~~~~~qi~~----------------------~l~~LH~~~ivH~dlkp~Nill~~~  154 (292)
T cd06658         105 ALTDIVTHT--RMNEEQIATVCLSVLR----------------------ALSYLHNQGVIHRDIKSDSILLTSD  154 (292)
T ss_pred             cHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeecCCCHHHEEEcCC
Confidence            999988642  5888888888887777                      8888999999999999999888654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.82  E-value=3.6e-19  Score=122.75  Aligned_cols=131  Identities=22%  Similarity=0.281  Sum_probs=107.5

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEEecC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVTSKC   76 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~   76 (157)
                      +.+.||+|++|.||++....   .+++|.+.... ......+.+..|+.+++.++|+|++++.+.+.. ...+++++||+
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (257)
T cd08223           4 FVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRN-ASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFC   82 (257)
T ss_pred             EEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhh-cCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEeccc
Confidence            35789999999999998754   49999987643 334456678889999999999999999988764 44689999999


Q ss_pred             CCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++++|.+++.... ..+++.++..++.+++.                      +++++|+++++|+|+++.|++.....
T Consensus        83 ~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~----------------------~l~~lH~~~i~H~di~p~nil~~~~~  139 (257)
T cd08223          83 EGGDLYHKLKEQKGKLLPENQVVEWFVQIAM----------------------ALQYLHEKHILHRDLKTQNVFLTRTN  139 (257)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCchhEEEecCC
Confidence            9999999998642 35899999999987777                      78888999999999999998876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.82  E-value=2.3e-19  Score=126.01  Aligned_cols=127  Identities=20%  Similarity=0.181  Sum_probs=102.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+++|.+....  .......+.+|+..++.++|+|++++++++......++++||+. 
T Consensus        10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-   86 (291)
T cd07870          10 LEKLGEGSYATVYKGISRINGQLVALKVISMKT--EEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-   86 (291)
T ss_pred             EEEEEecCCEEEEEEEEcCCCcEEEEEEecccC--cCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-
Confidence            4689999999999998753   59999987542  12223356789999999999999999999999999999999995 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++.+.+......+++..+..++.|++.                      +|.++|.++++|+|+|+.|++....
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~L~~lH~~~i~H~dlkp~Nil~~~~  139 (291)
T cd07870          87 TDLAQYMIQHPGGLHPYNVRLFMFQLLR----------------------GLAYIHGQHILHRDLKPQNLLISYL  139 (291)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCChHHEEEcCC
Confidence            6787777654446788888888877666                      7888899999999999999987643

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.82  E-value=4.6e-19  Score=123.91  Aligned_cols=128  Identities=20%  Similarity=0.182  Sum_probs=99.8

Q ss_pred             ccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHH---HHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            4 RIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEV---TTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .||+|+||.||++....   .+|+|.+.............+..|.   ..+....|||++.+.+.+...+..+++|||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            48999999999998754   5999998765322222222233333   34445689999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...+ .+++..+..++.|+++                      +++++|+++++|||+++.|++..+.+
T Consensus        81 g~~L~~~l~~~~-~l~~~~~~~~~~ql~~----------------------~l~~lH~~~i~H~di~p~nili~~~~  134 (278)
T cd05606          81 GGDLHYHLSQHG-VFSEAEMRFYAAEIIL----------------------GLEHMHNRFVVYRDLKPANILLDEHG  134 (278)
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEcCCCCHHHEEECCCC
Confidence            999999887654 7899999999998888                      77778888899999999998876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.82  E-value=2.7e-19  Score=125.13  Aligned_cols=127  Identities=20%  Similarity=0.267  Sum_probs=105.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||+|....   .+++|.+....  .......+.+|+.+++.++|||++++++.+...+..+++|||+++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   82 (284)
T cd07836           5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDA--EEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK   82 (284)
T ss_pred             eeeeccCCceEEEEEEECCCCeEEEEEEecccc--cccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc
Confidence            5789999999999999854   49999987642  122345567899999999999999999999999999999999975


Q ss_pred             CCHhHHHhhhc--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK--EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                       +|.+++....  ..+++..+..++.|++.                      +|+++|+++++|+|+++.|++..+.
T Consensus        83 -~l~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~h~dl~p~ni~~~~~  136 (284)
T cd07836          83 -DLKKYMDTHGVRGALDPNTVKSFTYQLLK----------------------GIAFCHENRVLHRDLKPQNLLINKR  136 (284)
T ss_pred             -cHHHHHHhcCCCCCcCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeCCCCHHHEEECCC
Confidence             8888887543  35899999999998877                      7778888899999999999888654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.82  E-value=2.6e-19  Score=125.89  Aligned_cols=128  Identities=21%  Similarity=0.248  Sum_probs=105.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|....   .+++|.+.... ........+.+|+.++..++|||++++++++...  ...++++||+
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~   88 (293)
T cd07843          10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEK-EKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYV   88 (293)
T ss_pred             hhhhcCCCCeEEEEEEECCCCcEEEEEEEeecc-ccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhc
Confidence            4679999999999999864   48999987543 2223334567899999999999999999998877  8899999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      . ++|.+++......+++..+..++.|++.                      +|+++|+++++|+|+++.|++..+.
T Consensus        89 ~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~----------------------aL~~LH~~~i~H~dl~p~nili~~~  142 (293)
T cd07843          89 E-HDLKSLMETMKQPFLQSEVKCLMLQLLS----------------------GVAHLHDNWILHRDLKTSNLLLNNR  142 (293)
T ss_pred             C-cCHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeccCCHHHEEECCC
Confidence            7 4999988765546899999999998887                      7777888899999999999887654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.82  E-value=3.5e-19  Score=123.27  Aligned_cols=125  Identities=24%  Similarity=0.360  Sum_probs=103.2

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|++|.||++....  .+++|.+....    ...+.+.+|+.+++.++|||++++++++. .+..+++|||++++
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~   85 (260)
T cd05069          11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT----MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKG   85 (260)
T ss_pred             eeeecCcCCCeEEEEEEcCCceEEEEEcccCC----ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCC
Confidence            4679999999999998755  48999886532    23456788999999999999999998875 45678999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.+++.... ..+++..+..++.|++.                      +++++|+++++|+|+++.|++..+.
T Consensus        86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------al~~lH~~~i~H~dl~~~Nill~~~  138 (260)
T cd05069          86 SLLDFLKEGDGKYLKLPQLVDMAAQIAD----------------------GMAYIERMNYIHRDLRAANILVGDN  138 (260)
T ss_pred             CHHHHHhhCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeecccCcceEEEcCC
Confidence            9999997643 24788888888887777                      8888999999999999999988654

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.82  E-value=2.6e-19  Score=126.28  Aligned_cols=125  Identities=21%  Similarity=0.257  Sum_probs=105.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||.|++|.||++....   .+++|.+....   ......+.+|+..++.++|||++++++.+.....+++++||+++
T Consensus        24 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  100 (296)
T cd06655          24 YEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAG  100 (296)
T ss_pred             EEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCC
Confidence            3579999999999998644   59999887532   23456678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|..++...  .+++.++..++.|++.                      +++++|+++++|+|+++.|++....
T Consensus       101 ~~L~~~~~~~--~l~~~~~~~i~~~l~~----------------------al~~LH~~~i~H~dL~p~Nili~~~  151 (296)
T cd06655         101 GSLTDVVTET--CMDEAQIAAVCRECLQ----------------------ALEFLHANQVIHRDIKSDNVLLGMD  151 (296)
T ss_pred             CcHHHHHHhc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEECCC
Confidence            9999988753  6899999999998777                      6777778889999999999887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.82  E-value=5.2e-19  Score=121.85  Aligned_cols=126  Identities=20%  Similarity=0.336  Sum_probs=108.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+...     ...+.+.+|+..++.++|||++++++.+.....+++++||+++
T Consensus         8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   82 (256)
T cd06612           8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE-----EDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA   82 (256)
T ss_pred             hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH-----HHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence            5679999999999999864   4899998653     2267889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+..+++..+..++.|++.                      ++.++|..+++|+|+++.|++..+..
T Consensus        83 ~~L~~~l~~~~~~l~~~~~~~~~~~l~~----------------------~l~~lh~~~i~H~dl~~~ni~~~~~~  136 (256)
T cd06612          83 GSVSDIMKITNKTLTEEEIAAILYQTLK----------------------GLEYLHSNKKIHRDIKAGNILLNEEG  136 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCcceEEECCCC
Confidence            9999999865557899999999998777                      77778888899999999998876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.81  E-value=1.7e-19  Score=130.19  Aligned_cols=126  Identities=17%  Similarity=0.204  Sum_probs=101.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      .+.||+|+||.||++....   .+|+|.+.... ........+.+|+.+++.++|||++++++.+...      ...+++
T Consensus        22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv  100 (355)
T cd07874          22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLV  100 (355)
T ss_pred             EEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEE
Confidence            4679999999999998754   59999987643 3344566778899999999999999999988653      347999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++ ++.+.+..   .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus       101 ~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~----------------------aL~~LH~~givHrDikp~Nill~~  154 (355)
T cd07874         101 MELMDA-NLCQVIQM---ELDHERMSYLLYQMLC----------------------GIKHLHSAGIIHRDLKPSNIVVKS  154 (355)
T ss_pred             hhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCChHHEEECC
Confidence            999965 67776653   5788888888887777                      888889999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       155 ~~  156 (355)
T cd07874         155 DC  156 (355)
T ss_pred             CC
Confidence            54

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.81  E-value=8.4e-19  Score=121.73  Aligned_cols=129  Identities=23%  Similarity=0.310  Sum_probs=104.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCC--CHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD--DEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e   74 (157)
                      .+.||+|+||.||++....   .+++|.+......  .......+.+|+.+++.++|||++++++.+..  ...+++++|
T Consensus         7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e   86 (266)
T cd06651           7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFME   86 (266)
T ss_pred             cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEe
Confidence            5789999999999998754   4999988654311  12345578889999999999999999998865  356889999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+++++|.+++...+ .+++.....++.|++.                      +++++|+++++|+|+++.|++..+.
T Consensus        87 ~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------~l~~LH~~~i~H~~l~p~nil~~~~  142 (266)
T cd06651          87 YMPGGSVKDQLKAYG-ALTESVTRKYTRQILE----------------------GMSYLHSNMIVHRDIKGANILRDSA  142 (266)
T ss_pred             CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeCCCCHHHEEECCC
Confidence            999999999998654 6888888888887777                      7777888889999999988887654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=7.8e-19  Score=120.69  Aligned_cols=128  Identities=23%  Similarity=0.354  Sum_probs=111.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.+|++....   .+++|.+.... ........+.+|+.++..++|||++++.+++...+..++++||+++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (254)
T cd06627           5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEK-IKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAEN   83 (254)
T ss_pred             eeEEcccCCeEEEEEEEcCCCcEEEEEEecccc-cCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCC
Confidence            5789999999999998754   59999998754 2335667899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++.... .+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+.
T Consensus        84 ~~L~~~~~~~~-~l~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~p~ni~i~~~  135 (254)
T cd06627          84 GSLRQIIKKFG-PFPESLVAVYVYQVLQ----------------------GLAYLHEQGVIHRDIKAANILTTKD  135 (254)
T ss_pred             CcHHHHHHhcc-CCCHHHHHHHHHHHHH----------------------HHHHHhhCCcccCCCCHHHEEECCC
Confidence            99999998754 7899999999887777                      7788898999999999999888763

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG0584|consensus

Probab=99.81  E-value=6.5e-20  Score=135.24  Aligned_cols=130  Identities=19%  Similarity=0.262  Sum_probs=106.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCC-CCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc--eEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDY-LDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH--LAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~lv~e~   75 (157)
                      .+.||+|+|-+||+|.+..   .||.-.++... ..++...+.|..|+.+++.++||||++++.++.+...  +.+++|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            4689999999999999855   35543333221 1456678999999999999999999999999988654  8899999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +..|+|.+++++.+ ..+...+..++.||++ .+.|+|+++|                   .|+|||+|=.|+|...
T Consensus       125 ~TSGtLr~Y~kk~~-~vn~kaik~W~RQILk-GL~yLHs~~P-------------------PIIHRDLKCDNIFinG  180 (632)
T KOG0584|consen  125 FTSGTLREYRKKHR-RVNIKAIKSWCRQILK-GLVYLHSQDP-------------------PIIHRDLKCDNIFVNG  180 (632)
T ss_pred             ccCCcHHHHHHHhc-cCCHHHHHHHHHHHHH-HhhhhhcCCC-------------------CccccccccceEEEcC
Confidence            99999999999987 7899999999998888 6666655555                   6899999999988754

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.81  E-value=3e-19  Score=125.79  Aligned_cols=125  Identities=22%  Similarity=0.286  Sum_probs=105.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+...   .....+.+.+|+.+++.++|||++++++.+...+..++++||+++
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~  100 (293)
T cd06647          24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAG  100 (293)
T ss_pred             eeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCC
Confidence            4679999999999998643   4999998653   233456788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++...  .+++..+..++.|++.                      ++.++|+++++|+|+++.|++....
T Consensus       101 ~~L~~~~~~~--~l~~~~~~~i~~~l~~----------------------al~~LH~~gi~H~dL~p~Nili~~~  151 (293)
T cd06647         101 GSLTDVVTET--CMDEGQIAAVCRECLQ----------------------ALEFLHSNQVIHRDIKSDNILLGMD  151 (293)
T ss_pred             CcHHHHHhhc--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeeccCCHHHEEEcCC
Confidence            9999998753  5788888888887777                      7777888899999999999887653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.81  E-value=1.1e-19  Score=126.66  Aligned_cols=130  Identities=24%  Similarity=0.237  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|++|.||++....   .+++|.+.............+..|..++..+. |||++++++.+......+++|||++
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~   85 (280)
T cd05581           6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAP   85 (280)
T ss_pred             eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCC
Confidence            5789999999999999854   49999987643333444567788899999998 9999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...+ .+++..+..++.|++.                      ++.++|+.+++|+|+++.|++....+
T Consensus        86 ~~~L~~~l~~~~-~l~~~~~~~i~~ql~~----------------------~l~~Lh~~~~~H~dl~~~ni~i~~~~  139 (280)
T cd05581          86 NGELLQYIRKYG-SLDEKCTRFYAAEILL----------------------ALEYLHSKGIIHRDLKPENILLDKDM  139 (280)
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCCHHHeEECCCC
Confidence            999999998765 7999999999998888                      77778888999999999999886543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.81  E-value=3.5e-19  Score=122.81  Aligned_cols=126  Identities=26%  Similarity=0.400  Sum_probs=104.5

Q ss_pred             CCCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.+.||+|+||.||++...+ .+++|.+...     ...+.+.+|+.++..++|||++++++++... ..+++|||++++
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~-----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~   83 (254)
T cd05083          10 LGEIIGEGEFGAVLQGEYTGQKVAVKNIKCD-----VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKG   83 (254)
T ss_pred             eeeeeccCCCCceEecccCCCceEEEeecCc-----chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCC
Confidence            35789999999999998755 5999988653     2345788899999999999999999988655 468999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++.... ..+++..+..++.|++.                      ++.++|+++++|||+++.|++.....
T Consensus        84 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~~~~H~dl~p~nili~~~~  137 (254)
T cd05083          84 NLVNFLRTRGRALVSVIQLLQFSLDVAE----------------------GMEYLESKKLVHRDLAARNILVSEDG  137 (254)
T ss_pred             CHHHHHHhcCcCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccccCcceEEEcCCC
Confidence            9999998643 24788888888887777                      78888999999999999999886543

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.81  E-value=2.4e-19  Score=126.52  Aligned_cols=124  Identities=22%  Similarity=0.251  Sum_probs=105.0

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ..||+|+||.||++....   .+++|.+....   ......+.+|+..+..++|||++++++.+...+..++++||++++
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~  103 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG  103 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence            468999999999998743   59999986532   234566788999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|..++...  .+++..+..++.|++.                      +++++|+++++|||+++.|++....
T Consensus       104 ~L~~~~~~~--~~~~~~~~~~~~qi~~----------------------~L~~LH~~~ivH~dl~p~Nill~~~  153 (297)
T cd06659         104 ALTDIVSQT--RLNEEQIATVCESVLQ----------------------ALCYLHSQGVIHRDIKSDSILLTLD  153 (297)
T ss_pred             CHHHHHhhc--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHeEEccC
Confidence            999987642  6889998888887777                      7888899999999999999988654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.81  E-value=6.6e-19  Score=121.67  Aligned_cols=130  Identities=22%  Similarity=0.252  Sum_probs=107.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--CCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--PPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~   76 (157)
                      .+.||.|+||.||++....   .+++|.+.... ......+.+..|+..+++++|||++++++.+..  ....+++|||+
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~   83 (265)
T cd08217           5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGN-MTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYC   83 (265)
T ss_pred             eeeeccCCCeEEEEeeecCCCCEEEEEEEeccc-CCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhc
Confidence            5689999999999998755   48999887654 345556778899999999999999999997764  35689999999


Q ss_pred             CCCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc-----cccccccCCCCccc
Q psy697           77 NGHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP-----KKRILARSPSHPLN  148 (157)
Q Consensus        77 ~~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~-----~~~~~~rd~k~~~~  148 (157)
                      ++++|.+++...   ...+++..+..++.|++.                      +++++|     ..+++|+|+++.|+
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~----------------------~l~~lH~~~~~~~~i~h~dl~p~ni  141 (265)
T cd08217          84 EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLL----------------------ALYECHNRSDPGNTVLHRDLKPANI  141 (265)
T ss_pred             cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHH----------------------HHHHHhcCccccCcceecCCCHHHE
Confidence            999999999764   346889999999998888                      666677     78899999999999


Q ss_pred             cccccc
Q psy697          149 LSRSAE  154 (157)
Q Consensus       149 ~~~~~~  154 (157)
                      +..+.+
T Consensus       142 li~~~~  147 (265)
T cd08217         142 FLDANN  147 (265)
T ss_pred             EEecCC
Confidence            887644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=5.9e-19  Score=123.05  Aligned_cols=127  Identities=22%  Similarity=0.346  Sum_probs=106.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC---CCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR---HENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..   .+++|.+....  .......+.+|+.+++.+.   |||++++++.+......+++|||
T Consensus         6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~   83 (277)
T cd06917           6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEY   83 (277)
T ss_pred             hhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEec
Confidence            4689999999999999744   49999987642  2344566788888888886   99999999999998999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.++++..  .+++..+..++.|++.                      ++.++|+.+++|+|+++.|++..+.+
T Consensus        84 ~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~----------------------~l~~lh~~~i~H~dl~p~ni~i~~~~  138 (277)
T cd06917          84 AEGGSVRTLMKAG--PIAEKYISVIIREVLV----------------------ALKYIHKVGVIHRDIKAANILVTNTG  138 (277)
T ss_pred             CCCCcHHHHHHcc--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCcCHHHEEEcCCC
Confidence            9999999998653  6889999988887777                      77778888999999999998887543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0658|consensus

Probab=99.81  E-value=3.3e-20  Score=129.33  Aligned_cols=122  Identities=26%  Similarity=0.293  Sum_probs=99.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--C---ceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--P---HLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~---~~~lv~   73 (157)
                      .+.+|+|+||.||+|....   ++|+|.+-...       +---+|+.+|+.++|||||++.-+|...  .   ...+||
T Consensus        29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             eEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            3678999999999999865   49999885432       1224688999999999999999888653  2   356799


Q ss_pred             ecCCCCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           74 SKCNGHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        74 e~~~~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ||++. +|.+.++..   +..++.-.+..++.|+.+                      +|.|+|..+|+|||+||.|+|.
T Consensus       102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfr----------------------gl~yLh~~~IcHRDIKPqNlLv  158 (364)
T KOG0658|consen  102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFR----------------------GLAYLHSHGICHRDIKPQNLLV  158 (364)
T ss_pred             HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHH----------------------HHHHHHhcCcccCCCChheEEE
Confidence            99976 999999852   336788888889998888                      8999999999999999999998


Q ss_pred             ccc
Q psy697          151 RSA  153 (157)
Q Consensus       151 ~~~  153 (157)
                      ...
T Consensus       159 D~~  161 (364)
T KOG0658|consen  159 DPD  161 (364)
T ss_pred             cCC
Confidence            654

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.81  E-value=9.7e-19  Score=122.60  Aligned_cols=127  Identities=21%  Similarity=0.273  Sum_probs=109.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.+|+|++|.||++.+..   .+++|.+....   . ....+.+|+..+..++|+|++++++.+...+..++++||+++
T Consensus        24 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   99 (286)
T cd06614          24 LEKIGEGASGEVYKATDRATGKEVAIKKMRLRK---Q-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG   99 (286)
T ss_pred             hHhccCCCCeEEEEEEEccCCcEEEEEEEecCc---h-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence            3578999999999999863   49999997642   2 456788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++......+++..+..++.|++.                      +|.++|..+++|+|+++.|++..+.+
T Consensus       100 ~~L~~~l~~~~~~l~~~~~~~i~~~i~~----------------------~L~~lH~~gi~H~dl~p~ni~i~~~~  153 (286)
T cd06614         100 GSLTDIITQNFVRMNEPQIAYVCREVLQ----------------------GLEYLHSQNVIHRDIKSDNILLSKDG  153 (286)
T ss_pred             CcHHHHHHHhccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeCCCChhhEEEcCCC
Confidence            9999999876446899999999998877                      78888888999999999998887543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.81  E-value=2.2e-19  Score=123.79  Aligned_cols=130  Identities=26%  Similarity=0.350  Sum_probs=108.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+.... ........+.+|+.+++.++|+|++++++.+...+.+++++||+++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (257)
T cd08225           5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTK-MPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDG   83 (257)
T ss_pred             EEEecCCCcceEEEEEEcCCCceEEEEEeeHhh-ccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCC
Confidence            4679999999999999865   48999987643 2233456778899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... ..+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+.+
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lh~~~i~H~dl~~~nil~~~~~  138 (257)
T cd08225          84 GDLMKRINRQRGVLFSEDQILSWFVQISL----------------------GLKHIHDRKILHRDIKSQNIFLSKNG  138 (257)
T ss_pred             CcHHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccccCCHHHEEEcCCC
Confidence            99999997643 24788899999998777                      67777888889999998888876553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=8.2e-19  Score=121.65  Aligned_cols=130  Identities=26%  Similarity=0.371  Sum_probs=104.8

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCC--CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL--DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVT   73 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~   73 (157)
                      +.+.||+|+||.||++....   .+++|.+.....  ........+.+|+.+++.++|+|++++++++...  ..+++++
T Consensus         6 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~   85 (264)
T cd06653           6 LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFV   85 (264)
T ss_pred             eeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEE
Confidence            36789999999999998754   499998754311  1234456788999999999999999999988764  4688999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+++++|.+++...+ .+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+.
T Consensus        86 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~----------------------al~~LH~~~i~H~dl~p~ni~i~~~  142 (264)
T cd06653          86 EYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQ----------------------GVSYLHSNMIVHRDIKGANILRDSA  142 (264)
T ss_pred             EeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEecCCCCHHHEEEcCC
Confidence            9999999999998654 6888888888887777                      7777888888999999888887543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.81  E-value=7.9e-19  Score=122.65  Aligned_cols=128  Identities=16%  Similarity=0.224  Sum_probs=106.1

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+..       .+++|.+...  ........+.+|+.++.+++|||++++++++.. ....++++
T Consensus        11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   88 (280)
T cd05043          11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLY   88 (280)
T ss_pred             eeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEE
Confidence            4789999999999999754       3888887643  345557778899999999999999999998776 46789999


Q ss_pred             ecCCCCCHhHHHhhhc-------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCc
Q psy697           74 SKCNGHTLYTNIHIYK-------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP  146 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~  146 (157)
                      ||+++++|.+++....       ..+++..+..++.|++.                      +++++|+++++|||+++.
T Consensus        89 ~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~----------------------~l~~LH~~~i~H~di~p~  146 (280)
T cd05043          89 PYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIAC----------------------GMSYLHKRGVIHKDIAAR  146 (280)
T ss_pred             EcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeecccCHh
Confidence            9999999999987632       24788888889887777                      777888889999999999


Q ss_pred             ccccccc
Q psy697          147 LNLSRSA  153 (157)
Q Consensus       147 ~~~~~~~  153 (157)
                      |++..+.
T Consensus       147 nil~~~~  153 (280)
T cd05043         147 NCVIDEE  153 (280)
T ss_pred             hEEEcCC
Confidence            9888654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.81  E-value=3.5e-19  Score=128.93  Aligned_cols=126  Identities=18%  Similarity=0.198  Sum_probs=101.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      .+.||+|+||.||++....   .+|+|.+.... .+......+.+|+.+++.++|||++++++.+...      ..++++
T Consensus        29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv  107 (364)
T cd07875          29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV  107 (364)
T ss_pred             EEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEE
Confidence            4679999999999998754   49999997643 3344566778899999999999999999887543      357999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++ +|.+.+..   .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus       108 ~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivH~Dlkp~NIll~~  161 (364)
T cd07875         108 MELMDA-NLCQVIQM---ELDHERMSYLLYQMLC----------------------GIKHLHSAGIIHRDLKPSNIVVKS  161 (364)
T ss_pred             EeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHH----------------------HHHHHhhCCeecCCCCHHHEEECC
Confidence            999965 77777753   4788888888887777                      888889999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       162 ~~  163 (364)
T cd07875         162 DC  163 (364)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.81  E-value=1.1e-18  Score=120.93  Aligned_cols=130  Identities=19%  Similarity=0.213  Sum_probs=109.0

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +++.||.|+||.||++....   .+++|.+.... . ....+.+.+|+..++.++|+|++++++.+......++++|+++
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~   82 (267)
T cd06610           5 LIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEK-C-QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLS   82 (267)
T ss_pred             eeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCC-c-chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccC
Confidence            35789999999999998754   48999987643 1 2356778899999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhc--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYK--EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.++++...  ..+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+.+
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~----------------------al~~lh~~~i~h~~l~p~ni~~~~~~  139 (267)
T cd06610          83 GGSLLDIMKSSYPRGGLDEAIIATVLKEVLK----------------------GLEYLHSNGQIHRDIKAGNILLGEDG  139 (267)
T ss_pred             CCcHHHHHHHhcccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHhEEEcCCC
Confidence            999999997642  25888888888887777                      77778888899999999998877643

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0599|consensus

Probab=99.81  E-value=4.5e-20  Score=125.13  Aligned_cols=129  Identities=17%  Similarity=0.188  Sum_probs=109.8

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCC-----CHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEE
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD-----DEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~-----~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      +.+|.|..+.|.++.++.   .+|+|++..+...     .....+.-..|+.+++++ .||+|+++.+.|.++..+++|+
T Consensus        23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVF  102 (411)
T KOG0599|consen   23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVF  102 (411)
T ss_pred             HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhh
Confidence            468999999999888765   4899988765421     123355667899999999 8999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |.|+.|.|++++...- .+++.....+|.|+..                      +++++|.++|+|||+|+.|+|....
T Consensus       103 dl~prGELFDyLts~V-tlSEK~tR~iMrqlfe----------------------gVeylHa~~IVHRDLKpENILlddn  159 (411)
T KOG0599|consen  103 DLMPRGELFDYLTSKV-TLSEKETRRIMRQLFE----------------------GVEYLHARNIVHRDLKPENILLDDN  159 (411)
T ss_pred             hhcccchHHHHhhhhe-eecHHHHHHHHHHHHH----------------------HHHHHHHhhhhhcccChhheeeccc
Confidence            9999999999998744 7999999999997777                      8888999999999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       160 ~  160 (411)
T KOG0599|consen  160 M  160 (411)
T ss_pred             c
Confidence            4

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.81  E-value=9.6e-19  Score=122.73  Aligned_cols=125  Identities=22%  Similarity=0.261  Sum_probs=106.8

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|++|.||++....   .+++|.+..   ......+.+.+|+.+++.++|||++++++.+...+..++++||++++
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~---~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDL---RKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEec---cchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence            579999999999998754   499998865   33344566889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++.. + .+++..+..++.|++.                      +++++|+++++|||+++.|++....+
T Consensus       102 ~L~~~~~~-~-~~~~~~~~~~~~ql~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~~~  152 (285)
T cd06648         102 ALTDIVTH-T-RMNEEQIATVCLAVLK----------------------ALSFLHAQGVIHRDIKSDSILLTSDG  152 (285)
T ss_pred             CHHHHHHh-C-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCChhhEEEcCCC
Confidence            99999886 3 6888988888887777                      78888999999999999998876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG1035|consensus

Probab=99.81  E-value=4.9e-20  Score=144.08  Aligned_cols=129  Identities=22%  Similarity=0.241  Sum_probs=100.7

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC------------
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP------------   67 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------------   67 (157)
                      +.||+|+||.||+++-+=   .||+|.++...  +...-.+..+|+.++++++|||+|+++.++....            
T Consensus       485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~  562 (1351)
T KOG1035|consen  485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASD  562 (1351)
T ss_pred             HHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccc
Confidence            579999999999998643   59999998763  3445667788999999999999999997764321            


Q ss_pred             --------------------------------------------------------------------------------
Q psy697           68 --------------------------------------------------------------------------------   67 (157)
Q Consensus        68 --------------------------------------------------------------------------------   67 (157)
                                                                                                      
T Consensus       563 ~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~  642 (1351)
T KOG1035|consen  563 SESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVIL  642 (1351)
T ss_pred             hhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCcccc
Confidence                                                                                            


Q ss_pred             ---------------------------ceEEEEecCCCCCHhHHHhhhcccC-CHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy697           68 ---------------------------HLAIVTSKCNGHTLYTNIHIYKEKF-ALNKMSTVGQQISQDVLMKCWSYKPSD  119 (157)
Q Consensus        68 ---------------------------~~~lv~e~~~~g~L~~~i~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~  119 (157)
                                                 .+||-||||+..++.++++... .. .....+.++.+|++             
T Consensus       643 d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~-~~~~~d~~wrLFreIlE-------------  708 (1351)
T KOG1035|consen  643 DDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH-FNSQRDEAWRLFREILE-------------  708 (1351)
T ss_pred             CcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc-cchhhHHHHHHHHHHHH-------------
Confidence                                       3677888888777777666532 22 35566777775555             


Q ss_pred             CCCHHHHHHHHhccccccccccCCCCcccccccccCC
Q psy697          120 RPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESV  156 (157)
Q Consensus       120 Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~~  156 (157)
                               +|.|+|++++||||+||.|+|..+.+.+
T Consensus       709 ---------GLaYIH~~giIHRDLKP~NIFLd~~~~V  736 (1351)
T KOG1035|consen  709 ---------GLAYIHDQGIIHRDLKPRNIFLDSRNSV  736 (1351)
T ss_pred             ---------HHHHHHhCceeeccCCcceeEEcCCCCe
Confidence                     9999999999999999999999877653

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.81  E-value=5.5e-19  Score=122.86  Aligned_cols=127  Identities=24%  Similarity=0.370  Sum_probs=103.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC------CceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP------PHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~------~~~~l   71 (157)
                      .+.||+|+||.||+|....   .+++|.+....    .....+..|+.++..+ +|+|++++++.+...      ..+++
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i   86 (272)
T cd06637          11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL   86 (272)
T ss_pred             HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence            4679999999999998865   48999987542    2335677889999998 799999999998753      45899


Q ss_pred             EEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           72 VTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      +|||+++++|.+++.... ..+++..+..++.|++.                      ++.++|+++++|||+++.|++.
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~----------------------~l~~LH~~~ivh~dl~~~nili  144 (272)
T cd06637          87 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR----------------------GLSHLHQHKVIHRDIKGQNVLL  144 (272)
T ss_pred             EEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCCccCCCCHHHEEE
Confidence            999999999999988643 35888988888888777                      7777888889999999999887


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      ....
T Consensus       145 ~~~~  148 (272)
T cd06637         145 TENA  148 (272)
T ss_pred             CCCC
Confidence            6543

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0690|consensus

Probab=99.81  E-value=1.3e-20  Score=130.43  Aligned_cols=129  Identities=20%  Similarity=0.222  Sum_probs=113.8

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +++||+|.||+|.+++.+.+   +|+|++++..+...+....-..|-+++...+||.+..+--.|.+.+++++||||..|
T Consensus       173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanG  252 (516)
T KOG0690|consen  173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANG  252 (516)
T ss_pred             HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccC
Confidence            57899999999999998773   999999988776666667777899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |.|+-.+.+.+ .+++...+.+..+|+.                      +|.|+|+++|++||+|-.|.+....
T Consensus       253 GeLf~HLsrer-~FsE~RtRFYGaEIvs----------------------AL~YLHs~~ivYRDlKLENLlLDkD  304 (516)
T KOG0690|consen  253 GELFFHLSRER-VFSEDRTRFYGAEIVS----------------------ALGYLHSRNIVYRDLKLENLLLDKD  304 (516)
T ss_pred             ceEeeehhhhh-cccchhhhhhhHHHHH----------------------HhhhhhhCCeeeeechhhhheeccC
Confidence            99999998766 7999999999885444                      8999999999999999999887654

>KOG0199|consensus

Probab=99.81  E-value=5.6e-20  Score=137.62  Aligned_cols=126  Identities=25%  Similarity=0.371  Sum_probs=109.0

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|.||.|++|.|..      .||||.+......  .....|++|+..|.++.|+|++++||...+ ..+.+|+|+
T Consensus       115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~--~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL  191 (1039)
T KOG0199|consen  115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN--AIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL  191 (1039)
T ss_pred             HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc--hhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence            5789999999999999965      4999999875432  267789999999999999999999999887 567899999


Q ss_pred             CCCCCHhHHHhh-hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           76 CNGHTLYTNIHI-YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        76 ~~~g~L~~~i~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++.|+|.+.+++ .+..|.......++.|||.                      ++.|+-.++++|||+.+.|++..+
T Consensus       192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~----------------------aM~YLeskrlvHRDLAARNlllas  247 (1039)
T KOG0199|consen  192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAK----------------------AMQYLESKRLVHRDLAARNLLLAS  247 (1039)
T ss_pred             cccchHHHHHhhccccceeHHHHHHHHHHHHH----------------------HHHHHhhhhhhhhhhhhhhheecc
Confidence            999999999998 4446888888899998888                      777788889999999999988766

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.81  E-value=6.9e-19  Score=123.23  Aligned_cols=127  Identities=22%  Similarity=0.288  Sum_probs=101.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEe-----cCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACM-----KPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~-----~~~~~~lv   72 (157)
                      .+.||+|+||.||++....   .+++|.+....    .....+.+|+.++..+ +|||++++++++.     ..+.++++
T Consensus        23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv   98 (286)
T cd06638          23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLV   98 (286)
T ss_pred             eeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEE
Confidence            5789999999999998854   48999876532    2234577889999999 7999999999874     34568999


Q ss_pred             EecCCCCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           73 TSKCNGHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      |||+++++|.+++...   +..+++..+..++.|++.                      ++.++|+++++|||+++.|++
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlkp~nil  156 (286)
T cd06638          99 LELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALM----------------------GLQHLHVNKTIHRDVKGNNIL  156 (286)
T ss_pred             EeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHH----------------------HHHHHHhCCccccCCCHHhEE
Confidence            9999999999987632   235788888888887777                      777788888999999999988


Q ss_pred             ccccc
Q psy697          150 SRSAE  154 (157)
Q Consensus       150 ~~~~~  154 (157)
                      ..+..
T Consensus       157 i~~~~  161 (286)
T cd06638         157 LTTEG  161 (286)
T ss_pred             ECCCC
Confidence            77654

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.80  E-value=1.7e-18  Score=123.07  Aligned_cols=128  Identities=20%  Similarity=0.294  Sum_probs=106.4

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||+|....   .+++|.+...........+.+.+|+.++..++|||++++++++......+++|||+. |
T Consensus        27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~  105 (313)
T cd06633          27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-G  105 (313)
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-C
Confidence            569999999999998744   499999876543444455678889999999999999999999999999999999995 5


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++.+++......+++.++..++.|++.                      ++.++|+++++|+|+++.|++....
T Consensus       106 ~l~~~l~~~~~~l~~~~~~~~~~qi~~----------------------al~~LH~~gi~H~dl~p~nili~~~  157 (313)
T cd06633         106 SASDLLEVHKKPLQEVEIAAITHGALQ----------------------GLAYLHSHNMIHRDIKAGNILLTEP  157 (313)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCChhhEEECCC
Confidence            788887765546889988888887777                      7777888899999999999887654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.80  E-value=5.4e-19  Score=124.09  Aligned_cols=129  Identities=23%  Similarity=0.236  Sum_probs=106.3

Q ss_pred             CCccccCceeeEEEEEEe------cceEEEEeccCCC-CCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH------GEVAVKVLDVDYL-DDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~------~~~avk~~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||.+...      ..+|+|.+..... ......+.+.+|+.++..+ +|+|++++++++......++++
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL   84 (290)
T ss_pred             eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence            568999999999999863      2499999875321 1223456678899999999 6999999999999989999999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+++++|.+++...+ .+++..+..++.|++.                      +++++|+++++|||+++.|++....
T Consensus        85 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------al~~lH~~~i~H~dl~p~nil~~~~  141 (290)
T cd05613          85 DYINGGELFTHLSQRE-RFKEQEVQIYSGEIVL----------------------ALEHLHKLGIIYRDIKLENILLDSN  141 (290)
T ss_pred             ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCHHHeEECCC
Confidence            9999999999998654 6888888888888777                      7777888899999999999888654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.80  E-value=8.4e-19  Score=123.50  Aligned_cols=125  Identities=22%  Similarity=0.249  Sum_probs=105.4

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ..||+|+||.||++....   .+++|.+..   ........+.+|+..++.++|+|++++++.+...+..+++|||++++
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  102 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDL---RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  102 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecc---cchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence            368999999999998854   499998764   23345667889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++...  .+++..+..++.|++.                      +++++|+++++|+|+++.|++..+.+
T Consensus       103 ~L~~~~~~~--~~~~~~~~~~~~ql~~----------------------~l~~lH~~givH~dl~p~Nilv~~~~  153 (292)
T cd06657         103 ALTDIVTHT--RMNEEQIAAVCLAVLK----------------------ALSVLHAQGVIHRDIKSDSILLTHDG  153 (292)
T ss_pred             cHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEECCCC
Confidence            999987643  5788888888887777                      77788888999999999998887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.80  E-value=1.3e-18  Score=119.66  Aligned_cols=129  Identities=26%  Similarity=0.297  Sum_probs=111.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+.... ........+..|+.+++.++|||++++.+.+...+..++++||+++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~   83 (258)
T cd08215           5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN-MSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADG   83 (258)
T ss_pred             EeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc-CChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCC
Confidence            4679999999999999863   59999997754 3345667788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+.+....   ..+++..+..++.++++                      ++.++|+++++|+|+++.|++....
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lh~~~~~H~dl~~~nil~~~~  139 (258)
T cd08215          84 GDLSQKIKKQKKEGKPFPEEQILDWFVQLCL----------------------ALKYLHSRKILHRDIKPQNIFLTSN  139 (258)
T ss_pred             CcHHHHHHHhhccCCCcCHHHHHHHHHHHHH----------------------HHHHHHhCCEecccCChHHeEEcCC
Confidence            99999998752   47899999999998777                      8888999999999999999888763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.80  E-value=1.5e-18  Score=121.73  Aligned_cols=128  Identities=16%  Similarity=0.257  Sum_probs=103.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~   76 (157)
                      .+.||.|++|.||++....   .+++|.+...  ........+.+|+.+++.++||||+++++++...  +.++++|||+
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~   83 (287)
T cd06621           6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTD--PNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYC   83 (287)
T ss_pred             EEEeccCCceEEEEEEECCCCeEEEEEEEecC--CchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEec
Confidence            3679999999999999854   4999998764  2334567788999999999999999999988653  4689999999


Q ss_pred             CCCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++++|.+++...   ...+++..+..++.|++.                      +|.++|+.+++|+|+++.|++..+.
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~----------------------~L~~lH~~~i~H~dl~~~nil~~~~  141 (287)
T cd06621          84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLK----------------------GLSYLHSRKIIHRDIKPSNILLTRK  141 (287)
T ss_pred             CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEEecC
Confidence            999999887642   235788888888887777                      7777888888999999888887654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1152|consensus

Probab=99.80  E-value=1.1e-19  Score=133.48  Aligned_cols=130  Identities=16%  Similarity=0.201  Sum_probs=108.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCC-CHH----HHHHHHHHHHHHHhcC---CCceeeeeeEEecCCceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD-DEK----TWEAFKLEVTTFRKTR---HENLVLFMGACMKPPHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~-~~~----~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~   70 (157)
                      .+.+|+|+||+|++|.+++   .|++|.+.+.... +..    .......|+++|..++   |+||+++.++|+.++++|
T Consensus       566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yy  645 (772)
T KOG1152|consen  566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYY  645 (772)
T ss_pred             eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeE
Confidence            4689999999999999987   4999999876531 111    1224568999999996   999999999999999999


Q ss_pred             EEEecC-CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           71 IVTSKC-NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        71 lv~e~~-~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      ++||-- ++-+|+++|.... .+++.++..++.||+-                      +.+.+|+++|+|||+|.+|+.
T Consensus       646 l~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~a----------------------gi~hlh~~~ivhrdikdenvi  702 (772)
T KOG1152|consen  646 LETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVA----------------------GIKHLHDQGIVHRDIKDENVI  702 (772)
T ss_pred             EEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHh----------------------ccccccccCceecccccccEE
Confidence            999954 4569999998765 7999999999997777                      888899999999999999998


Q ss_pred             ccccc
Q psy697          150 SRSAE  154 (157)
Q Consensus       150 ~~~~~  154 (157)
                      ..+.+
T Consensus       703 vd~~g  707 (772)
T KOG1152|consen  703 VDSNG  707 (772)
T ss_pred             EecCC
Confidence            87754

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.80  E-value=7.3e-19  Score=124.83  Aligned_cols=122  Identities=17%  Similarity=0.257  Sum_probs=97.4

Q ss_pred             CCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e   74 (157)
                      +..||+|+||.||+|....     .+|+|.+....     ....+.+|+.+++.++|||++++++++..  ...+++++|
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD   80 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence            4679999999999998643     48999886542     12346789999999999999999998854  467899999


Q ss_pred             cCCCCCHhHHHhhhc--------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCc
Q psy697           75 KCNGHTLYTNIHIYK--------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP  146 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~  146 (157)
                      |+.+ +|.+++....        ..+++..+..++.|++.                      +|+++|+++++|||+|+.
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------aL~~lH~~~ivH~Dlkp~  137 (317)
T cd07867          81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILD----------------------GIHYLHANWVLHRDLKPA  137 (317)
T ss_pred             eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEcCCCCHH
Confidence            9864 7877775321        24778888888887777                      888889889999999999


Q ss_pred             ccccc
Q psy697          147 LNLSR  151 (157)
Q Consensus       147 ~~~~~  151 (157)
                      |++..
T Consensus       138 Nil~~  142 (317)
T cd07867         138 NILVM  142 (317)
T ss_pred             HEEEc
Confidence            99873

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.80  E-value=4.8e-19  Score=131.12  Aligned_cols=123  Identities=20%  Similarity=0.221  Sum_probs=96.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--------CceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--------PHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~~~~   70 (157)
                      ++.||+|+||.||+|....   .+|+|.+....       ....+|+.+++.++|||++++++++...        ..++
T Consensus        71 ~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~  143 (440)
T PTZ00036         71 GNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLN  143 (440)
T ss_pred             eEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEE
Confidence            5689999999999999854   49999885421       1234689999999999999998876432        2467


Q ss_pred             EEEecCCCCCHhHHHhh---hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           71 IVTSKCNGHTLYTNIHI---YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ++|||+++ ++.+++..   .+..+++..+..++.|++.                      +|+++|+++|+|||+|+.|
T Consensus       144 lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------gL~yLH~~~IiHrDLKp~N  200 (440)
T PTZ00036        144 VVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCR----------------------ALAYIHSKFICHRDLKPQN  200 (440)
T ss_pred             EEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEecCCcCHHH
Confidence            89999975 77777653   2336888888888887777                      8888899999999999999


Q ss_pred             ccccccc
Q psy697          148 NLSRSAE  154 (157)
Q Consensus       148 ~~~~~~~  154 (157)
                      ++....+
T Consensus       201 ILl~~~~  207 (440)
T PTZ00036        201 LLIDPNT  207 (440)
T ss_pred             EEEcCCC
Confidence            9986543

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.80  E-value=3.4e-19  Score=124.79  Aligned_cols=127  Identities=21%  Similarity=0.173  Sum_probs=105.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||+|....   .+++|.+.... .+......+.+|+.+++.++|+|++++++.+...+..++++||+++
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~   84 (288)
T cd07833           6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVER   84 (288)
T ss_pred             EEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-ccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCC
Confidence            4679999999999998864   49999887543 2334567788999999999999999999999999999999999998


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +.+..+..... .+++..+..++.|++.                      ++.++|+++++|+|+++.|++...
T Consensus        85 ~~l~~~~~~~~-~~~~~~~~~~~~~i~~----------------------~l~~LH~~~i~H~dl~~~ni~~~~  135 (288)
T cd07833          85 TLLELLEASPG-GLPPDAVRSYIWQLLQ----------------------AIAYCHSHNIIHRDIKPENILVSE  135 (288)
T ss_pred             CHHHHHHhcCC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHeEECC
Confidence            77766655433 6899999999998777                      777788888999999999888765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.80  E-value=7e-19  Score=120.80  Aligned_cols=127  Identities=22%  Similarity=0.209  Sum_probs=109.1

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      ||+|+||.||++....   .+++|.+.............+..|+.+++.++|||++++++.+...+.++++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6999999999999854   5899998775433344566788899999999999999999999999999999999999999


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+++...+ .+++..+..++.|+++                      ++.++|.++++|+|+++.|++....+
T Consensus        81 ~~~l~~~~-~l~~~~~~~~~~qi~~----------------------~l~~lh~~~~~H~~l~p~ni~~~~~~  130 (250)
T cd05123          81 FSHLSKEG-RFSEERARFYAAEIVL----------------------ALEYLHSLGIIYRDLKPENILLDADG  130 (250)
T ss_pred             HHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCceecCCCcceEEEcCCC
Confidence            99998755 6899999999888777                      78888989999999999998876644

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.80  E-value=6.3e-19  Score=123.53  Aligned_cols=129  Identities=22%  Similarity=0.272  Sum_probs=98.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHh---cCCCceeeeeeEEec-----CCceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK---TRHENLVLFMGACMK-----PPHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~---l~h~niv~~~~~~~~-----~~~~~   70 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ..........+|+.++..   ++|||++++++++..     ...++
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~   83 (288)
T cd07863           5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQT-NEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVT   83 (288)
T ss_pred             eeEEeecCCeEEEEEEECCCCcEEEEEEeccCc-CCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEE
Confidence            5789999999999999865   49999987643 111122334456666554   479999999998764     24589


Q ss_pred             EEEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           71 IVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      +++||+. ++|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++
T Consensus        84 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~~ivH~dikp~Nil  140 (288)
T cd07863          84 LVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLR----------------------GLDFLHANCIVHRDLKPENIL  140 (288)
T ss_pred             EEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEE
Confidence            9999997 48888887643 24889999999887777                      788888889999999999998


Q ss_pred             ccccc
Q psy697          150 SRSAE  154 (157)
Q Consensus       150 ~~~~~  154 (157)
                      ..+.+
T Consensus       141 i~~~~  145 (288)
T cd07863         141 VTSGG  145 (288)
T ss_pred             ECCCC
Confidence            86544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.80  E-value=1e-18  Score=123.94  Aligned_cols=127  Identities=14%  Similarity=0.119  Sum_probs=102.0

Q ss_pred             ccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCHh
Q psy697            4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLY   82 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~   82 (157)
                      .+|.|+++.++++...+ .+|+|.+.... ........+..|+..++.++|||++++++++......+++|||+++|+|.
T Consensus         9 ~~~~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   87 (314)
T cd08216           9 CFEDLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE   87 (314)
T ss_pred             hhcCCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence            34445555555555433 59999997643 34456678999999999999999999999999999999999999999999


Q ss_pred             HHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           83 TNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        83 ~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++.... ..+++..+..++.|++.                      +|+++|+++++|||+++.|++....
T Consensus        88 ~~l~~~~~~~~~~~~~~~~~~~l~~----------------------~L~~LH~~~ivH~dlk~~Nili~~~  137 (314)
T cd08216          88 DLLKTHFPEGLPELAIAFILKDVLN----------------------ALDYIHSKGFIHRSVKASHILLSGD  137 (314)
T ss_pred             HHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCcceEEEecC
Confidence            9998642 35788888888887766                      8888898999999999999988753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.80  E-value=1.6e-18  Score=121.12  Aligned_cols=127  Identities=17%  Similarity=0.207  Sum_probs=99.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHH-HHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTT-FRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||++....   .+|+|.++... .. .....+..|... ++..+|||++++++++...+..+++|||++
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~-~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~   83 (283)
T cd06617           6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATV-NS-QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD   83 (283)
T ss_pred             EEEecccCCeEEEEEEEcCCCcEEEEEEEecCC-Cc-HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc
Confidence            4679999999999999864   49999987653 22 223344455554 556699999999999999999999999996


Q ss_pred             CCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~  153 (157)
                       |+|.+++...   +..+++..+..++.|++.                      +++++|++ +++|||+|+.|++..+.
T Consensus        84 -~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~~i~h~dlkp~nil~~~~  140 (283)
T cd06617          84 -TSLDKFYKKVYDKGLTIPEDILGKIAVSIVK----------------------ALEYLHSKLSVIHRDVKPSNVLINRN  140 (283)
T ss_pred             -ccHHHHHHHhccCCCCCCHHHHHHHHHHHHH----------------------HHHHHhhcCCeecCCCCHHHEEECCC
Confidence             6888887642   235889999999998888                      77778876 88999999999887654

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.80  E-value=8e-19  Score=124.35  Aligned_cols=129  Identities=21%  Similarity=0.252  Sum_probs=103.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ........+.+|+.++.+++|+|++++++++...  +.++++|||+
T Consensus        12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~   90 (309)
T cd07845          12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDN-ERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYC   90 (309)
T ss_pred             eeeeeecCCEEEEEEEECCCCcEEEEEEEEecc-CCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecC
Confidence            4679999999999999854   49999987543 1222233456799999999999999999998764  5689999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+ +|.+++......+++.++..++.|++.                      ++.++|+++++|||+++.|++.....
T Consensus        91 ~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~nil~~~~~  145 (309)
T cd07845          91 EQ-DLASLLDNMPTPFSESQVKCLMLQLLR----------------------GLQYLHENFIIHRDLKVSNLLLTDKG  145 (309)
T ss_pred             CC-CHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEECCCC
Confidence            64 888888765447899999999887777                      77778888999999999998886543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.79  E-value=2.6e-18  Score=118.12  Aligned_cols=128  Identities=25%  Similarity=0.346  Sum_probs=110.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~   76 (157)
                      .+.||+|++|.||+|....   .+++|.+.... ......+.+.+|+..+++++|||++++++.+...  ..+++++||+
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~   83 (260)
T cd06606           5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSG-DSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV   83 (260)
T ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence            4679999999999999863   49999987654 2245577889999999999999999999999888  8899999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++++|.+++.... .+++..+..++.|++.                      +++++|+.+++|+|+++.|++....
T Consensus        84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~----------------------~l~~lh~~~~~h~dl~p~ni~i~~~  137 (260)
T cd06606          84 SGGSLSSLLKKFG-KLPEPVIRKYTRQILE----------------------GLAYLHSNGIVHRDIKGANILVDSD  137 (260)
T ss_pred             CCCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCCHHHEEEcCC
Confidence            9999999998765 7899999999887777                      7777888899999999998887753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.79  E-value=2.9e-18  Score=119.30  Aligned_cols=130  Identities=21%  Similarity=0.322  Sum_probs=103.5

Q ss_pred             CCCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC------c
Q psy697            1 MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP------H   68 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~   68 (157)
                      +.+.||+|+||.||+|.+..      .+|+|.+.... .+....+.+.+|+.+++.++|||++++++.+....      .
T Consensus         3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             chhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            35789999999999998642      48999987654 34455667889999999999999999999886532      3


Q ss_pred             eEEEEecCCCCCHhHHHhhhc-----ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCC
Q psy697           69 LAIVTSKCNGHTLYTNIHIYK-----EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP  143 (157)
Q Consensus        69 ~~lv~e~~~~g~L~~~i~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~  143 (157)
                      .++++||+.+|+|.+++....     ..+++..+..++.|++.                      +++++|+++++|||+
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~di  139 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIAS----------------------GMEYLSSKNFIHRDL  139 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeeccc
Confidence            478899999999988875321     13677778888887777                      888889889999999


Q ss_pred             CCcccccccc
Q psy697          144 SHPLNLSRSA  153 (157)
Q Consensus       144 k~~~~~~~~~  153 (157)
                      |+.|++..+.
T Consensus       140 kp~nili~~~  149 (273)
T cd05074         140 AARNCMLNEN  149 (273)
T ss_pred             chhhEEEcCC
Confidence            9999988654

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.79  E-value=6.9e-19  Score=123.11  Aligned_cols=129  Identities=20%  Similarity=0.229  Sum_probs=105.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||+|....   .+++|.+.... ........+.+|+..+++++|||++++++++...+..+++|||+. 
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-   82 (284)
T cd07860           5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-   82 (284)
T ss_pred             eeeecCCCceEEEEEEECCCCCEEEEEEccccc-cccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-
Confidence            4679999999999998754   49999887543 223334578889999999999999999999999999999999995 


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|..++.... ..+++..+..++.|++.                      +++++|+++++|+|+++.|++..+..
T Consensus        83 ~~l~~~~~~~~~~~l~~~~~~~~~~~i~~----------------------~l~~lh~~~i~H~~l~p~nill~~~~  137 (284)
T cd07860          83 QDLKKFMDASPLSGIPLPLIKSYLFQLLQ----------------------GLAFCHSHRVLHRDLKPQNLLINTEG  137 (284)
T ss_pred             cCHHHHHHhCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEECCCC
Confidence            68888886532 36889999999998777                      77778888899999999988876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.79  E-value=2.9e-18  Score=119.12  Aligned_cols=127  Identities=23%  Similarity=0.361  Sum_probs=104.2

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCC------ceE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPP------HLA   70 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~------~~~   70 (157)
                      +.+.||+|++|.||+|....   .+++|.+....    ...+.+.+|+.++.++ .|+|++++++++....      .++
T Consensus        10 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~   85 (275)
T cd06608          10 LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW   85 (275)
T ss_pred             heeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence            35789999999999999854   48999887642    2346788999999999 7999999999997654      489


Q ss_pred             EEEecCCCCCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           71 IVTSKCNGHTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ++|||+++++|.+++....   ..+++..+..++.|++.                      +++++|+++++|+|+++.|
T Consensus        86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~----------------------al~~lH~~~i~H~~l~p~n  143 (275)
T cd06608          86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLR----------------------GLAYLHENKVIHRDIKGQN  143 (275)
T ss_pred             EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHH----------------------HHHHHhcCCcccCCCCHHH
Confidence            9999999999999987532   46889999999998888                      7777888888899999888


Q ss_pred             cccccc
Q psy697          148 NLSRSA  153 (157)
Q Consensus       148 ~~~~~~  153 (157)
                      ++....
T Consensus       144 i~~~~~  149 (275)
T cd06608         144 ILLTKN  149 (275)
T ss_pred             EEEccC
Confidence            887643

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.79  E-value=1.3e-18  Score=139.39  Aligned_cols=118  Identities=17%  Similarity=0.258  Sum_probs=98.1

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||+|....   .+|+|.+.....       ....|+..+++++||||+++++++...+..+++|||+++|
T Consensus       696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g  768 (968)
T PLN00113        696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGK  768 (968)
T ss_pred             cEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCC
Confidence            579999999999999743   599998865321       1123577889999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc---cccccccCCCCcccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP---KKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~---~~~~~~rd~k~~~~~~~~~  153 (157)
                      +|.++++    .++|..+..++.|++.                      +++++|   ..+++|||+|+.|++....
T Consensus       769 ~L~~~l~----~l~~~~~~~i~~~ia~----------------------~L~yLH~~~~~~iiH~dlkp~Nil~~~~  819 (968)
T PLN00113        769 NLSEVLR----NLSWERRRKIAIGIAK----------------------ALRFLHCRCSPAVVVGNLSPEKIIIDGK  819 (968)
T ss_pred             cHHHHHh----cCCHHHHHHHHHHHHH----------------------HHHHhccCCCCCeecCCCCHHhEEECCC
Confidence            9999996    4789999999998888                      555566   5689999999999987654

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.79  E-value=1.6e-18  Score=121.11  Aligned_cols=126  Identities=19%  Similarity=0.254  Sum_probs=101.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC--CceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP--PHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~~lv~e~   75 (157)
                      .+.||+|+||.||++....   .+++|.+.... .+. .......|+..+.++ +|+|++++++.+...  +.+++++||
T Consensus         4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~-~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHF-KSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             EeeccccccceEEEEEEcCCCcEEEEEEehhcc-CCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            5689999999999998754   49999887643 122 222345688888888 599999999999887  889999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++ +++.+.+......+++..+..++.|++.                      +|+++|+++++|||+++.|++...
T Consensus        82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~L~~LH~~~i~H~dl~p~ni~l~~  135 (282)
T cd07831          82 MD-MNLYELIKGRKRPLPEKRVKSYMYQLLK----------------------SLDHMHRNGIFHRDIKPENILIKD  135 (282)
T ss_pred             CC-ccHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCceecccCHHHEEEcC
Confidence            96 5888888765446899999999998777                      777888889999999999988765

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.79  E-value=1.6e-18  Score=124.67  Aligned_cols=126  Identities=17%  Similarity=0.188  Sum_probs=102.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC------ceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP------HLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv   72 (157)
                      .+.||+|+||.||++....   .+|+|.+.... ........+.+|+.+++.++|||++++++.+....      ..+++
T Consensus        20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv   98 (343)
T cd07880          20 LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLV   98 (343)
T ss_pred             EEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEE
Confidence            4679999999999998754   49999986543 33344566789999999999999999999887653      35899


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+ +++|.+++...  .+++..+..++.|++.                      +++++|+.+++|||+++.|++...
T Consensus        99 ~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~----------------------al~~LH~~gi~H~dlkp~Nill~~  153 (343)
T cd07880          99 MPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLK----------------------GLKYIHAAGIIHRDLKPGNLAVNE  153 (343)
T ss_pred             EecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEcC
Confidence            9999 77998888642  6899999999888777                      777788889999999999988765


Q ss_pred             c
Q psy697          153 A  153 (157)
Q Consensus       153 ~  153 (157)
                      .
T Consensus       154 ~  154 (343)
T cd07880         154 D  154 (343)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.79  E-value=5.1e-18  Score=116.26  Aligned_cols=127  Identities=28%  Similarity=0.434  Sum_probs=109.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++...+   .+++|.+....   ......+.+|+..++.++|+|++++.+.+......++++||+++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLES---KEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             eeeeccCCceEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            4689999999999999863   49999997642   24567888999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++......+++..+..++.|++.                      ++.++|.++++|+|+++.|++....
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lh~~~i~h~dl~p~ni~i~~~  134 (253)
T cd05122          82 GSLKDLLKSTNQTLTESQIAYVCKELLK----------------------GLEYLHSNGIIHRDIKAANILLTSD  134 (253)
T ss_pred             CcHHHHHhhcCCCCCHHHHHHHHHHHHH----------------------HHHHhhcCCEecCCCCHHHEEEccC
Confidence            9999999876347899999999998777                      7778888899999999999887654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.79  E-value=4e-18  Score=120.82  Aligned_cols=129  Identities=21%  Similarity=0.283  Sum_probs=106.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+++|.+...........+.+.+|+.+++.++|+|++++.+++......++++||+. 
T Consensus        20 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-   98 (308)
T cd06634          20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-   98 (308)
T ss_pred             HHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-
Confidence            3578999999999999754   489998875432344455678889999999999999999999999999999999996 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |++.+.+......+++..+..++.|++.                      ++.++|+++++|||+++.|++....
T Consensus        99 ~~l~~~~~~~~~~l~~~~~~~~~~~l~~----------------------~l~~LH~~~i~H~dl~p~nil~~~~  151 (308)
T cd06634          99 GSASDLLEVHKKPLQEVEIAAVTHGALQ----------------------GLAYLHSHNMIHRDVKAGNILLSEP  151 (308)
T ss_pred             CCHHHHHHHcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCHHhEEECCC
Confidence            6888877655546888888888887777                      7777888899999999999888654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.79  E-value=1.5e-18  Score=122.63  Aligned_cols=128  Identities=23%  Similarity=0.315  Sum_probs=101.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC--------ceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP--------HLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--------~~~   70 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ........+.+|+.++++++|||++++++.+....        ..+
T Consensus        17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   95 (310)
T cd07865          17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFY   95 (310)
T ss_pred             EEEeecCCCEEEEEEEECCCCcEEEEEEEeccC-CcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEE
Confidence            4679999999999999754   59999886542 12222345567999999999999999999886653        459


Q ss_pred             EEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           71 IVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ++|||+. +++.+.+......+++..+..++.|++.                      +++++|+++++|+|+++.|++.
T Consensus        96 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~----------------------al~~lH~~~i~H~dl~p~nil~  152 (310)
T cd07865          96 LVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLN----------------------GLYYIHRNKILHRDMKAANILI  152 (310)
T ss_pred             EEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCCHHHEEE
Confidence            9999996 4888888765546899999999998888                      7777888888999999998887


Q ss_pred             ccc
Q psy697          151 RSA  153 (157)
Q Consensus       151 ~~~  153 (157)
                      ...
T Consensus       153 ~~~  155 (310)
T cd07865         153 TKD  155 (310)
T ss_pred             CCC
Confidence            653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.79  E-value=1.7e-18  Score=122.13  Aligned_cols=128  Identities=20%  Similarity=0.218  Sum_probs=101.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC----------c
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP----------H   68 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----------~   68 (157)
                      .+.||+|+||.||+|....   .+++|.+.... ........+..|+.+++.++|||++++++.+....          .
T Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   90 (302)
T cd07864          12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDN-EKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGA   90 (302)
T ss_pred             eeeecccCCEEEEEEEECCCCcEEEEEEEeecc-cccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCc
Confidence            5789999999999999864   48999987542 12223345678999999999999999999887654          7


Q ss_pred             eEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccc
Q psy697           69 LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLN  148 (157)
Q Consensus        69 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~  148 (157)
                      +++++||+++ ++...+......+++..+..++.|++.                      +|.++|+.+++|+|+++.|+
T Consensus        91 ~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~i~H~dl~p~ni  147 (302)
T cd07864          91 FYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLE----------------------GLNYCHKKNFLHRDIKCSNI  147 (302)
T ss_pred             EEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHE
Confidence            8999999976 777777654446899999999998888                      67777788888999998887


Q ss_pred             ccccc
Q psy697          149 LSRSA  153 (157)
Q Consensus       149 ~~~~~  153 (157)
                      +..+.
T Consensus       148 li~~~  152 (302)
T cd07864         148 LLNNK  152 (302)
T ss_pred             EECCC
Confidence            76543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.79  E-value=3.4e-18  Score=120.12  Aligned_cols=127  Identities=25%  Similarity=0.298  Sum_probs=102.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC-----CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP-----PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-----~~~~lv   72 (157)
                      .+.||+|+||.||++....   .+++|.+....    .....+..|+.++.++ +|||++++++.+...     +..+++
T Consensus        27 ~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv  102 (291)
T cd06639          27 IETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLV  102 (291)
T ss_pred             EEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEE
Confidence            4578999999999998854   48999886532    2234567788889988 899999999998754     358999


Q ss_pred             EecCCCCCHhHHHhh---hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           73 TSKCNGHTLYTNIHI---YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      |||+++++|.++++.   .+..+++..+..++.|++.                      +++++|+++++|||+++.|++
T Consensus       103 ~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~~ivH~dlkp~nil  160 (291)
T cd06639         103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALL----------------------GLQHLHNNRIIHRDVKGNNIL  160 (291)
T ss_pred             EEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCHHHEE
Confidence            999999999998864   2236889998889888777                      777788889999999999988


Q ss_pred             ccccc
Q psy697          150 SRSAE  154 (157)
Q Consensus       150 ~~~~~  154 (157)
                      .....
T Consensus       161 i~~~~  165 (291)
T cd06639         161 LTTEG  165 (291)
T ss_pred             EcCCC
Confidence            76544

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PRK10345 hypothetical protein; Provisional

Probab=99.78  E-value=1.4e-18  Score=116.42  Aligned_cols=119  Identities=12%  Similarity=0.130  Sum_probs=90.3

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-----CCCceeeeeeEEecCC---c-eEE
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-----RHENLVLFMGACMKPP---H-LAI   71 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~---~-~~l   71 (157)
                      +.||+|++|.||.  ++.  ..++|++....   ....+.+.+|+..+..+     +||||+++++++.++.   . +.+
T Consensus         8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             ceecCCCceEEEE--CCCCcCeEEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            6799999999996  433  35788876532   23456789999999999     5799999999998863   4 337


Q ss_pred             EEec--CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH-hccccccccccCCCCccc
Q psy697           72 VTSK--CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSL-EKLPKKRILARSPSHPLN  148 (157)
Q Consensus        72 v~e~--~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l-~~~~~~~~~~rd~k~~~~  148 (157)
                      ++||  +.+|+|.++++..  .+++.  ...+.+++.                      .+ +++|+++|+|||+|+.|+
T Consensus        83 I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~----------------------~l~~yLh~~~IvhrDlKp~NI  136 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLK----------------------KLKRYLLDNRIVTMELKPQNI  136 (210)
T ss_pred             EecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHH----------------------HHHHHHHHCCEeecCCCHHHE
Confidence            8999  5579999999753  45555  234444443                      44 788999999999999999


Q ss_pred             cccc
Q psy697          149 LSRS  152 (157)
Q Consensus       149 ~~~~  152 (157)
                      +...
T Consensus       137 Ll~~  140 (210)
T PRK10345        137 LCQR  140 (210)
T ss_pred             EEec
Confidence            9863

>KOG0666|consensus

Probab=99.78  E-value=5.5e-20  Score=126.51  Aligned_cols=128  Identities=16%  Similarity=0.249  Sum_probs=102.1

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~   73 (157)
                      ...||+|+||.||+|..++       .+|+|.++.+. ..........+|+.+++.++|||++++...+.+ ...+++++
T Consensus        29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~k-d~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~f  107 (438)
T KOG0666|consen   29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEK-DGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLF  107 (438)
T ss_pred             cceecccccceeeEeeeccCCcccchhhHHHHHhccC-CCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEe
Confidence            4578999999999996533       48999987654 223445677899999999999999999998877 78899999


Q ss_pred             ecCCCCCHhHHHhhhcc----cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           74 SKCNGHTLYTNIHIYKE----KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      ||+++ +|.+.|+.++.    .++...+..++.                      +++.++.|+|++=++|||+|+.|++
T Consensus       108 dYAEh-DL~~II~fHr~~~~~~lp~~mvKsilw----------------------Qil~Gv~YLH~NWvlHRDLKPaNIl  164 (438)
T KOG0666|consen  108 DYAEH-DLWHIIKFHRASKAKQLPRSMVKSILW----------------------QILDGVHYLHSNWVLHRDLKPANIL  164 (438)
T ss_pred             hhhhh-hHHHHHHHhccchhccCCHHHHHHHHH----------------------HHHhhhHHHhhhheeeccCCcceEE
Confidence            99987 99999987542    355555555555                      5555999999999999999999998


Q ss_pred             cccc
Q psy697          150 SRSA  153 (157)
Q Consensus       150 ~~~~  153 (157)
                      .-..
T Consensus       165 vmgd  168 (438)
T KOG0666|consen  165 VMGD  168 (438)
T ss_pred             Eecc
Confidence            7544

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.78  E-value=2.8e-18  Score=120.67  Aligned_cols=127  Identities=19%  Similarity=0.230  Sum_probs=102.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|.+|.||++....   .+++|.+.... ........+.+|+..++.++|||++++++++......+++|||++ 
T Consensus         7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-   84 (294)
T PLN00009          7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-   84 (294)
T ss_pred             EEEecCCCCEEEEEEEecCCCcEEEEEehhhcc-ccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-
Confidence            4678999999999998754   49999886543 222334567889999999999999999999999999999999996 


Q ss_pred             CCHhHHHhhhcc-cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKE-KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +++.+.+..... .+++..+..++.|++.                      +|+++|+++++|+|+++.|++...
T Consensus        85 ~~l~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------aL~~LH~~~i~H~dl~p~nill~~  137 (294)
T PLN00009         85 LDLKKHMDSSPDFAKNPRLIKTYLYQILR----------------------GIAYCHSHRVLHRDLKPQNLLIDR  137 (294)
T ss_pred             ccHHHHHHhCCCCCcCHHHHHHHHHHHHH----------------------HHHHHHhCCeeCCCCCcceEEEEC
Confidence            588887765432 3567777788887777                      788888889999999999988864

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.78  E-value=2.3e-18  Score=123.29  Aligned_cols=129  Identities=17%  Similarity=0.191  Sum_probs=104.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHH-----------HHHHHHHHHHHHHhcCCCceeeeeeEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEK-----------TWEAFKLEVTTFRKTRHENLVLFMGACMKPP   67 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~   67 (157)
                      .+.||+|+||.||+|....   .+|+|.+.........           ....+.+|+.++..++|||++++++++...+
T Consensus        14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   93 (335)
T PTZ00024         14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD   93 (335)
T ss_pred             hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence            4679999999999998754   5999998654311100           0124678999999999999999999999999


Q ss_pred             ceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           68 HLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        68 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ..+++|||+. |+|.+++.... .+++.....++.|++.                      +|+++|+++++|+|+++.|
T Consensus        94 ~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~----------------------aL~~LH~~~i~H~dl~~~n  149 (335)
T PTZ00024         94 FINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILN----------------------GLNVLHKWYFMHRDLSPAN  149 (335)
T ss_pred             cEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecccccHHH
Confidence            9999999996 69999987644 6889988888887777                      7788888899999999999


Q ss_pred             ccccccc
Q psy697          148 NLSRSAE  154 (157)
Q Consensus       148 ~~~~~~~  154 (157)
                      ++.....
T Consensus       150 ill~~~~  156 (335)
T PTZ00024        150 IFINSKG  156 (335)
T ss_pred             eEECCCC
Confidence            8876543

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.78  E-value=4.6e-18  Score=118.91  Aligned_cols=127  Identities=24%  Similarity=0.399  Sum_probs=102.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEec------CCceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMK------PPHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~~~~l   71 (157)
                      .+.+|+|+||.||+|....   .+++|.+...    ......+..|+.++.++ +|+|++++++++..      ...+++
T Consensus        21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i   96 (282)
T cd06636          21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWL   96 (282)
T ss_pred             heeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEE
Confidence            4679999999999999855   4899988653    23345678888888888 79999999999853      356899


Q ss_pred             EEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           72 VTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      +|||+++|+|.+++.... ..+++..+..++.|++.                      ++.++|+++++|+|+++.|++.
T Consensus        97 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~LH~~~ivH~dl~~~nili  154 (282)
T cd06636          97 VMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILR----------------------GLAHLHAHKVIHRDIKGQNVLL  154 (282)
T ss_pred             EEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEE
Confidence            999999999999997643 35788888888887777                      7777888889999999999887


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      ....
T Consensus       155 ~~~~  158 (282)
T cd06636         155 TENA  158 (282)
T ss_pred             CCCC
Confidence            6543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.78  E-value=8.8e-19  Score=116.15  Aligned_cols=127  Identities=13%  Similarity=0.055  Sum_probs=90.3

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHH-----------------------HHHHHHHHHHHHHhcCCCc
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEK-----------------------TWEAFKLEVTTFRKTRHEN   55 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~h~n   55 (157)
                      +...||+|+||.||+|....  ++|+|+++........                       .......|...+..+.+++
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           1 INGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            45789999999999999753  5999999764211100                       0122345888899987776


Q ss_pred             eeeeeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcc-c
Q psy697           56 LVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL-P  134 (157)
Q Consensus        56 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~-~  134 (157)
                      +........  ...+++|||++++++.......+ .++...+..++.|++.                      .|+++ |
T Consensus        81 v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~-~~~~~~~~~i~~qi~~----------------------~L~~l~H  135 (190)
T cd05147          81 IPCPEPILL--KSHVLVMEFIGDDGWAAPRLKDA-PLSESKARELYLQVIQ----------------------IMRILYQ  135 (190)
T ss_pred             CCCCcEEEe--cCCEEEEEEeCCCCCcchhhhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHH
Confidence            533322222  22389999999887765533323 6888888888887777                      77777 6


Q ss_pred             cccccccCCCCccccccc
Q psy697          135 KKRILARSPSHPLNLSRS  152 (157)
Q Consensus       135 ~~~~~~rd~k~~~~~~~~  152 (157)
                      +.+++|||+|+.|++..+
T Consensus       136 ~~giiHrDlkP~NIli~~  153 (190)
T cd05147         136 DCRLVHADLSEYNLLYHD  153 (190)
T ss_pred             hCCcccCCCCHHHEEEEC
Confidence            889999999999999874

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0604|consensus

Probab=99.78  E-value=1.4e-19  Score=123.81  Aligned_cols=122  Identities=21%  Similarity=0.198  Sum_probs=100.5

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC----CceEEEEe
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP----PHLAIVTS   74 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~----~~~~lv~e   74 (157)
                      ++||-|-.|.|..+.++.   .+|+|++..        .++..+|+++--.. .|||||++++.|.+.    ..+.+|||
T Consensus        68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D--------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE  139 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD--------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVME  139 (400)
T ss_pred             hhhccccCCceEEEEeccchhhhHHHHHhc--------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeee
Confidence            578999999999999877   499998853        23456677665444 799999999998764    45789999


Q ss_pred             cCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      .++||+|++.++.++ ..+++.++..++.||+.                      ++.++|+.+|.|||+|++|+|..+.
T Consensus       140 ~meGGeLfsriq~~g~~afTErea~eI~~qI~~----------------------Av~~lH~~nIAHRDlKpENLLyt~t  197 (400)
T KOG0604|consen  140 CMEGGELFSRIQDRGDQAFTEREASEIMKQIGL----------------------AVRYLHSMNIAHRDLKPENLLYTTT  197 (400)
T ss_pred             cccchHHHHHHHHcccccchHHHHHHHHHHHHH----------------------HHHHHHhcchhhccCChhheeeecC
Confidence            999999999999876 35999999999999999                      5556777788999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       198 ~  198 (400)
T KOG0604|consen  198 S  198 (400)
T ss_pred             C
Confidence            4

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.78  E-value=1.3e-18  Score=122.03  Aligned_cols=129  Identities=22%  Similarity=0.218  Sum_probs=105.6

Q ss_pred             CCccccCceeeEEEEEEe------cceEEEEeccCCC-CCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH------GEVAVKVLDVDYL-DDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~------~~~avk~~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|++|.||++...      .++++|.+..... ......+.+.+|+.++.++ +|||++++++.+......+++|
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   84 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL   84 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence            467999999999999753      2499999875321 1123345678899999999 6999999999999899999999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+++++|.+.+...+ .+++..+..++.|+++                      +|+++|..+++|+|+++.|++..+.
T Consensus        85 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~----------------------~l~~lH~~~~~H~dl~p~nil~~~~  141 (288)
T cd05583          85 DYVNGGELFTHLYQRE-HFTESEVRVYIAEIVL----------------------ALDHLHQLGIIYRDIKLENILLDSE  141 (288)
T ss_pred             ecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCCHHHeEECCC
Confidence            9999999999987654 6889988888887777                      7777888889999999999887654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PTZ00284 protein kinase; Provisional

Probab=99.78  E-value=2.4e-18  Score=128.36  Aligned_cols=125  Identities=20%  Similarity=0.194  Sum_probs=96.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC------CceeeeeeEEecC-CceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH------ENLVLFMGACMKP-PHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~~-~~~~l   71 (157)
                      .+.||+|+||.||+|.+..   .+|+|++...    .........|+.++..+.|      .+++.+.+++... ..+++
T Consensus       134 ~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~i  209 (467)
T PTZ00284        134 LSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV----PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCI  209 (467)
T ss_pred             EEEEEeccCEEEEEEEEcCCCeEEEEEEEecc----hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEE
Confidence            3579999999999998754   4999998642    1223344556666666544      4588888888764 56889


Q ss_pred             EEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCccccc
Q psy697           72 VTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLS  150 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~  150 (157)
                      +||++ +++|.+++...+ .+++..+..++.|++.                      +|+++|. .+|+|||+|+.|+|.
T Consensus       210 v~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~----------------------aL~yLH~~~gIiHrDlKP~NILl  265 (467)
T PTZ00284        210 VMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGV----------------------ALDYFHTELHLMHTDLKPENILM  265 (467)
T ss_pred             EEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhcCCeecCCCCHHHEEE
Confidence            99988 778999887655 7899999888887777                      8888997 499999999999998


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      ...+
T Consensus       266 ~~~~  269 (467)
T PTZ00284        266 ETSD  269 (467)
T ss_pred             ecCC
Confidence            7543

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.78  E-value=2.1e-18  Score=122.26  Aligned_cols=128  Identities=19%  Similarity=0.243  Sum_probs=103.0

Q ss_pred             CCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e   74 (157)
                      .+.||+|++|.||+|....     .+|+|.+.............+..|+.++..++|||++++++++...  ..++++||
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   84 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFD   84 (316)
T ss_pred             EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEe
Confidence            4679999999999999844     4999999763211123345677899999999999999999999888  78999999


Q ss_pred             cCCCCCHhHHHhhhc----ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           75 KCNGHTLYTNIHIYK----EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      |+++ ++.+++....    ..+++..+..++.|++.                      +++++|+++++|||+++.|++.
T Consensus        85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~h~dlkp~Nil~  141 (316)
T cd07842          85 YAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILN----------------------GVHYLHSNWVLHRDLKPANILV  141 (316)
T ss_pred             CCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHH----------------------HHHHHHhCCEeeCCCCHHHEEE
Confidence            9975 7777765422    25788888888887777                      7778888899999999999988


Q ss_pred             cc
Q psy697          151 RS  152 (157)
Q Consensus       151 ~~  152 (157)
                      .+
T Consensus       142 ~~  143 (316)
T cd07842         142 MG  143 (316)
T ss_pred             cC
Confidence            76

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.78  E-value=2.7e-18  Score=120.07  Aligned_cols=129  Identities=21%  Similarity=0.225  Sum_probs=107.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~   76 (157)
                      .+.||+|++|.||+|....   .+++|.+.... ........+..|+.++..++|||++++++.+...  +..++++||+
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~   82 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYM   82 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccc
Confidence            5679999999999999865   49999998753 2334456678899999999999999999999887  8899999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++ +|.+++......+++..+..++.|++.                      +++++|.++++|+|+++.|++..+..
T Consensus        83 ~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~----------------------al~~LH~~~~~h~dl~p~nil~~~~~  137 (287)
T cd07840          83 DH-DLTGLLDSPEVKFTESQIKCYMKQLLE----------------------GLQYLHSNGILHRDIKGSNILINNDG  137 (287)
T ss_pred             cc-cHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCceeccCcHHHeEEcCCC
Confidence            74 898888765446899999999998887                      77778888899999999998877543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0695|consensus

Probab=99.78  E-value=9.2e-20  Score=126.98  Aligned_cols=130  Identities=18%  Similarity=0.223  Sum_probs=117.4

Q ss_pred             CCCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecC
Q psy697            1 MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      ++++||+|+|++|.+++++++   +|+|++++...++.++...+..|-.+.... +||.+|.++.+|.+...+++|.||.
T Consensus       254 ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv  333 (593)
T KOG0695|consen  254 LLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYV  333 (593)
T ss_pred             eeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEe
Confidence            357899999999999999874   999999998888888888999999888888 8999999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +||+|...+++.+ .++++.+..+..+|+.                      +|+++|+++|++||+|-.|+|..+-
T Consensus       334 ~ggdlmfhmqrqr-klpeeharfys~ei~l----------------------al~flh~rgiiyrdlkldnvlldae  387 (593)
T KOG0695|consen  334 NGGDLMFHMQRQR-KLPEEHARFYSAEICL----------------------ALNFLHERGIIYRDLKLDNVLLDAE  387 (593)
T ss_pred             cCcceeeehhhhh-cCcHHHhhhhhHHHHH----------------------HHHHHhhcCeeeeeccccceEEccC
Confidence            9999999998877 7999999999886666                      8889999999999999999887653

>KOG2345|consensus

Probab=99.78  E-value=4.1e-19  Score=118.55  Aligned_cols=127  Identities=16%  Similarity=0.109  Sum_probs=107.6

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-----CCceEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-----PPHLAIV   72 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~lv   72 (157)
                      +.+.||+|+|+.|++++.-.   .+|+|.+-.   ...++.+..++|++..++++|||++++++....     ....|++
T Consensus        25 i~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c---~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll  101 (302)
T KOG2345|consen   25 IQRLLGEGGFSFVDLVKGLSTGHLYALKKILC---HSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLL  101 (302)
T ss_pred             EeeeecCCCceeeeeecccCcccchhhheeec---cchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEE
Confidence            35789999999999998533   499999977   445678889999999999999999999877644     3459999


Q ss_pred             EecCCCCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc--ccccCCCCcc
Q psy697           73 TSKCNGHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR--ILARSPSHPL  147 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~--~~~rd~k~~~  147 (157)
                      ++|...|+|.+.+...   +..+++.+++.++.++++                      +|+.+|+..  ..|||+|+.|
T Consensus       102 ~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~----------------------gL~~lH~~~~~yAH~DiKP~N  159 (302)
T KOG2345|consen  102 LPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICR----------------------GLEALHEKEPPYAHRDIKPAN  159 (302)
T ss_pred             eehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHH----------------------HHHHHhccCCcccccCCCcce
Confidence            9999999999999874   236999999999999999                      777777776  8999999999


Q ss_pred             ccccc
Q psy697          148 NLSRS  152 (157)
Q Consensus       148 ~~~~~  152 (157)
                      ++..+
T Consensus       160 ILls~  164 (302)
T KOG2345|consen  160 ILLSD  164 (302)
T ss_pred             eEecC
Confidence            98766

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.78  E-value=2.3e-18  Score=121.10  Aligned_cols=127  Identities=16%  Similarity=0.179  Sum_probs=102.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCc-----eEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPH-----LAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~-----~~lv   72 (157)
                      .+.||+|+||.||+|....   .+++|.+.... ........+.+|+.++..+ .|||++++++.+...+.     .+++
T Consensus         6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv   84 (295)
T cd07837           6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLV   84 (295)
T ss_pred             eeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEE
Confidence            4679999999999999854   49999886543 2222345677899999999 56999999998877655     8999


Q ss_pred             EecCCCCCHhHHHhhhc----ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccc
Q psy697           73 TSKCNGHTLYTNIHIYK----EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLN  148 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~  148 (157)
                      |||+++ +|.+++....    ..+++..+..++.|++.                      +|+++|+++++|||+++.|+
T Consensus        85 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~L~~LH~~~i~H~dl~~~ni  141 (295)
T cd07837          85 FEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLK----------------------GVAHCHKHGVMHRDLKPQNL  141 (295)
T ss_pred             eeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCChHHE
Confidence            999975 8888876532    24788999999887777                      78888888999999999998


Q ss_pred             cccc
Q psy697          149 LSRS  152 (157)
Q Consensus       149 ~~~~  152 (157)
                      +...
T Consensus       142 l~~~  145 (295)
T cd07837         142 LVDK  145 (295)
T ss_pred             EEec
Confidence            8875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.78  E-value=2.4e-18  Score=120.29  Aligned_cols=128  Identities=19%  Similarity=0.212  Sum_probs=105.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+.... ........+.+|+..++.++|||++++++.+...+..++++||++ 
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-   81 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLET-EDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-   81 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeeccc-ccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-
Confidence            5789999999999998754   59999987643 222334567889999999999999999999999999999999995 


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++.... ..+++..+..++.|+++                      +|+++|+++++|+|+++.|++....
T Consensus        82 ~~l~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~L~~lH~~~~~H~dl~p~nil~~~~  135 (283)
T cd07835          82 LDLKKYMDSSPLTGLDPPLIKSYLYQLLQ----------------------GIAYCHSHRVLHRDLKPQNLLIDRE  135 (283)
T ss_pred             cCHHHHHhhCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeCCCCCHHHEEEcCC
Confidence            68999887643 35889999999998777                      7777888888999999988887653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.78  E-value=2.9e-18  Score=118.02  Aligned_cols=129  Identities=21%  Similarity=0.244  Sum_probs=108.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.+|+|++|.||++....   .+++|.+.... ........+..|+.+++.++|+|++++.+.+......++++||+++
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd08530           5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGS-MSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPF   83 (256)
T ss_pred             eeeecCCCceeEEEEEECCCCCEEEEEEEehhh-ccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCC
Confidence            4689999999999998754   48999987654 2345567788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++...   +..+++..+..++.|++.                      +++++|+++++|+|+++.|++..+.
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------al~~lh~~~i~h~~l~~~ni~~~~~  139 (256)
T cd08530          84 GDLSKAISKRKKKRKLIPEQEIWRIFIQLLR----------------------GLQALHEQKILHRDLKSANILLVAN  139 (256)
T ss_pred             CCHHHHHHHHHhhcCCCCHHHHHHHHHHHHH----------------------HHHHHhhCCcccCCCCcceEEEecC
Confidence            9999998763   235888888899888777                      7777888899999999999887653

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG2052|consensus

Probab=99.78  E-value=6.2e-19  Score=125.87  Aligned_cols=131  Identities=27%  Similarity=0.377  Sum_probs=102.2

Q ss_pred             CCccccCceeeEEEEEEecc-eEEEEeccCCCCCHHHHHHHHHHHHHHHhc--CCCceeeeeeEEecC----CceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKT--RHENLVLFMGACMKP----PHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~-~avk~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~----~~~~lv~e   74 (157)
                      .+.+|+|.||.||+|.|+++ ||||++...   +   .+...+|-++..++  +|+||+.++++-..+    ..+|++++
T Consensus       216 ~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr---d---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTd  289 (513)
T KOG2052|consen  216 QEIIGKGRFGEVWRGRWRGEDVAVKIFSSR---D---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTD  289 (513)
T ss_pred             EEEecCccccceeeccccCCceEEEEeccc---c---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeee
Confidence            57899999999999999885 999999763   2   22345567777664  999999999887654    36999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |-+.|||++++.+.  .++.....+++..+|. .+.++|..=.           +.+  -.=.|.|||+|+-|+|+|+.+
T Consensus       290 YHe~GSL~DyL~r~--tv~~~~ml~LalS~As-GLaHLH~eI~-----------GTq--gKPaIAHRDlKSKNILVKkn~  353 (513)
T KOG2052|consen  290 YHEHGSLYDYLNRN--TVTTEGMLKLALSIAS-GLAHLHMEIV-----------GTQ--GKPAIAHRDLKSKNILVKKNG  353 (513)
T ss_pred             cccCCcHHHHHhhc--cCCHHHHHHHHHHHhh-hHHHHHHHHh-----------cCC--CCchhhccccccccEEEccCC
Confidence            99999999999974  7999999999999999 5555554300           000  001378999999999999865

>KOG0576|consensus

Probab=99.77  E-value=2.1e-20  Score=138.85  Aligned_cols=129  Identities=23%  Similarity=0.358  Sum_probs=111.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ..++|+|++|.||+++++.   ..|+|.++..-.   .+......|+-+++.++||||+.+++.|.....+|+.||||.+
T Consensus        20 lqrvgsgTygdvyKaRd~~s~elaavkvVkLep~---dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgg   96 (829)
T KOG0576|consen   20 LQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG---DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGG   96 (829)
T ss_pred             eeeecCCcccchhhhcccccCchhhheeeeccCC---ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCC
Confidence            5689999999999999866   388999887542   3345567788899999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccCC
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAESV  156 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~~  156 (157)
                      |+|.+..+--+ ++++.++...++...+                      +++++|.++.+|||+|..|+++.+.+++
T Consensus        97 gslQdiy~~Tg-plselqiayvcRetl~----------------------gl~ylhs~gk~hRdiKGanilltd~gDv  151 (829)
T KOG0576|consen   97 GSLQDIYHVTG-PLSELQIAYVCRETLQ----------------------GLKYLHSQGKIHRDIKGANILLTDEGDV  151 (829)
T ss_pred             Ccccceeeecc-cchhHHHHHHHhhhhc----------------------cchhhhcCCcccccccccceeecccCce
Confidence            99999877655 8999999888885544                      9999999999999999999999988875

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.77  E-value=5.4e-18  Score=122.30  Aligned_cols=126  Identities=17%  Similarity=0.186  Sum_probs=101.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      .+.||+|+||.||++....   .+|+|.+.... .+......+.+|+.++..++|||++++++++...      ...+++
T Consensus        21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv   99 (353)
T cd07850          21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLV   99 (353)
T ss_pred             EEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEE
Confidence            4679999999999998754   59999987543 3344556677899999999999999999988654      357999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+. ++|.+.+..   .+++..+..++.|++.                      +|+++|.++++|||+|+.|++..+
T Consensus       100 ~e~~~-~~l~~~~~~---~l~~~~~~~~~~ql~~----------------------aL~~LH~~gi~H~dlkp~Nil~~~  153 (353)
T cd07850         100 MELMD-ANLCQVIQM---DLDHERMSYLLYQMLC----------------------GIKHLHSAGIIHRDLKPSNIVVKS  153 (353)
T ss_pred             EeccC-CCHHHHHhh---cCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeCCCCHHHEEECC
Confidence            99995 588887764   3788888888887777                      888889889999999999998876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       154 ~~  155 (353)
T cd07850         154 DC  155 (353)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.77  E-value=1.5e-18  Score=124.22  Aligned_cols=128  Identities=16%  Similarity=0.173  Sum_probs=103.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec----CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK----PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e   74 (157)
                      .+.||+|++|.||++....   .+++|.+.... ........+.+|+.++..++|||++++++++..    ...+++++|
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e   88 (334)
T cd07855          10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-DVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMD   88 (334)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-ccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEe
Confidence            4679999999999998755   59999987643 223345667789999999999999999987754    346899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+. ++|.+++...+ .+++..+..++.|++.                      +|.++|+++++|||+|+.|++..+..
T Consensus        89 ~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~dlkp~Nil~~~~~  144 (334)
T cd07855          89 LME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLR----------------------GLKYIHSANVIHRDLKPSNLLVNEDC  144 (334)
T ss_pred             hhh-hhHHHHhccCC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            995 68999887654 6899999999998877                      77778888889999999988876543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.77  E-value=1.3e-18  Score=130.73  Aligned_cols=130  Identities=14%  Similarity=0.178  Sum_probs=93.3

Q ss_pred             CCccccCceeeEEEEEEecc----eEEEE--------------eccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEE
Q psy697            2 GDRIGKGHFGTVYNGNWHGE----VAVKV--------------LDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC   63 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~----~avk~--------------~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~   63 (157)
                      .+.||+|+||.||+|..+..    .+.|.              +.+...........+.+|+.++..++||||+++++++
T Consensus       153 i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~  232 (501)
T PHA03210        153 IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEIL  232 (501)
T ss_pred             EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEeEEE
Confidence            46899999999999876431    11111              1110002223455678999999999999999999999


Q ss_pred             ecCCceEEEEecCCCCCHhHHHhhhc----ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccccc
Q psy697           64 MKPPHLAIVTSKCNGHTLYTNIHIYK----EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRIL  139 (157)
Q Consensus        64 ~~~~~~~lv~e~~~~g~L~~~i~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~  139 (157)
                      ...+..+++++++. +++.+++....    ......++..++.|++.                      +|+++|+++|+
T Consensus       233 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~----------------------aL~yLH~~gIi  289 (501)
T PHA03210        233 RSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLC----------------------AVEYIHDKKLI  289 (501)
T ss_pred             EECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHH----------------------HHHHHHhCCee
Confidence            99999999999985 57777765421    11234445556665555                      88889999999


Q ss_pred             ccCCCCccccccccc
Q psy697          140 ARSPSHPLNLSRSAE  154 (157)
Q Consensus       140 ~rd~k~~~~~~~~~~  154 (157)
                      |||+|+.|+|..+..
T Consensus       290 HrDLKP~NILl~~~~  304 (501)
T PHA03210        290 HRDIKLENIFLNCDG  304 (501)
T ss_pred             cCCCCHHHEEECCCC
Confidence            999999999987643

>KOG4645|consensus

Probab=99.77  E-value=1.1e-19  Score=142.91  Aligned_cols=129  Identities=23%  Similarity=0.283  Sum_probs=107.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +..+|.|.||.||.|...+   -.|+|-+.... ..........+|..++..++|||+|+++|.-......+|.||||++
T Consensus      1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~-~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQD-SDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred             ccccCCcceeeeEEeecCCccchhhhhhhhcCc-cccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence            4578999999999998765   28888876543 2234445667899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.++++..+ -.++-...-+..|++.                      ++.++|+.+|+|||+|+.|++....+
T Consensus      1319 GsLa~ll~~gr-i~dE~vt~vyt~qll~----------------------gla~LH~~gIVHRDIK~aNI~Ld~~g 1371 (1509)
T KOG4645|consen 1319 GSLASLLEHGR-IEDEMVTRVYTKQLLE----------------------GLAYLHEHGIVHRDIKPANILLDFNG 1371 (1509)
T ss_pred             CcHHHHHHhcc-hhhhhHHHHHHHHHHH----------------------HHHHHHhcCceecCCCccceeeecCC
Confidence            99999998654 4566666667776666                      99999999999999999999987765

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.77  E-value=1.6e-17  Score=115.45  Aligned_cols=130  Identities=25%  Similarity=0.335  Sum_probs=104.3

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCC-------CCHHHHHHHHHHHHHHHh-cCCCceeeeeeEEecCCce
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYL-------DDEKTWEAFKLEVTTFRK-TRHENLVLFMGACMKPPHL   69 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~-------~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~   69 (157)
                      .+.||+|+||.||++....    .+++|.+.....       ........+..|+.++.+ ++|||++++++.+...+..
T Consensus         5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   84 (269)
T cd08528           5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRL   84 (269)
T ss_pred             hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeE
Confidence            5789999999999999855    389998764321       122344567778887765 6999999999999999999


Q ss_pred             EEEEecCCCCCHhHHHhh---hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCC
Q psy697           70 AIVTSKCNGHTLYTNIHI---YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSH  145 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~  145 (157)
                      +++|||+++++|.+++..   .+..+++..++.++.|++.                      ++.++|. ++++|+|+++
T Consensus        85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lh~~~~i~H~dl~~  142 (269)
T cd08528          85 YIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVL----------------------ALRYLHKEKRIVHRDLTP  142 (269)
T ss_pred             EEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHhccCCceeecCCCH
Confidence            999999999999998754   2336888889999988887                      7777885 6789999999


Q ss_pred             cccccccc
Q psy697          146 PLNLSRSA  153 (157)
Q Consensus       146 ~~~~~~~~  153 (157)
                      .|++..+.
T Consensus       143 ~nil~~~~  150 (269)
T cd08528         143 NNIMLGED  150 (269)
T ss_pred             HHEEECCC
Confidence            99988654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.77  E-value=3e-18  Score=122.87  Aligned_cols=128  Identities=19%  Similarity=0.211  Sum_probs=103.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-----CceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-----PHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~   73 (157)
                      .+.||+|+||.||++....   .+++|.+.... ........+..|+.+++.++|+|++++++++...     ...++++
T Consensus        10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~   88 (337)
T cd07858          10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-DNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVY   88 (337)
T ss_pred             EEEeccCCCeEEEEEEecCCCCeEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEE
Confidence            4679999999999998754   49999987543 2233345667899999999999999999887654     3489999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+. ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+++.|++..+.
T Consensus        89 e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~----------------------aL~~LH~~~i~H~dlkp~Nil~~~~  144 (337)
T cd07858          89 ELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLR----------------------GLKYIHSANVLHRDLKPSNLLLNAN  144 (337)
T ss_pred             eCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEecCCCCHHHEEEcCC
Confidence            9995 68998887654 7899999999887777                      7888888899999999999987654


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       145 ~  145 (337)
T cd07858         145 C  145 (337)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.77  E-value=1.1e-17  Score=116.48  Aligned_cols=119  Identities=13%  Similarity=0.160  Sum_probs=96.4

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      +|+|+||.||++..+.   .+++|.+...... .     .  |......+ +|||++++++.+...+..+++|||+++++
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~-----~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~   95 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-A-----I--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGD   95 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-h-----h--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCc
Confidence            5999999999998755   4899988754211 1     0  11112212 79999999999999999999999999999


Q ss_pred             HhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           81 LYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        81 L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |.+++...+ .+++..+..++.|+++                      +++++|+.+++|||+++.|++.....
T Consensus        96 L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~nil~~~~~  146 (267)
T PHA03390         96 LFDLLKKEG-KLSEAEVKKIIRQLVE----------------------ALNDLHKHNIIHNDIKLENVLYDRAK  146 (267)
T ss_pred             HHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeCCCCHHHEEEeCCC
Confidence            999998765 7899999999998777                      78888999999999999998887654

>KOG0608|consensus

Probab=99.77  E-value=1.4e-18  Score=129.25  Aligned_cols=129  Identities=16%  Similarity=0.076  Sum_probs=111.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||-|+||.|.++.-..   -+|+|.+.+...........+..|-.+|.....+.+|++|-.|.+.+.+|+||||++|
T Consensus       634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPG  713 (1034)
T KOG0608|consen  634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG  713 (1034)
T ss_pred             EeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCC
Confidence            4679999999999998755   3999999886554455566677888999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |++..++-+.+ -|.+..++.++.++.-                      +++++|.-|+||||+|+.|+|..-.
T Consensus       714 GDmMSLLIrmg-IFeE~LARFYIAEltc----------------------AiesVHkmGFIHRDiKPDNILIDrd  765 (1034)
T KOG0608|consen  714 GDMMSLLIRMG-IFEEDLARFYIAELTC----------------------AIESVHKMGFIHRDIKPDNILIDRD  765 (1034)
T ss_pred             ccHHHHHHHhc-cCHHHHHHHHHHHHHH----------------------HHHHHHhccceecccCccceEEccC
Confidence            99999998766 6888888888885555                      8888999999999999999987543

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.76  E-value=5.2e-18  Score=118.45  Aligned_cols=129  Identities=19%  Similarity=0.226  Sum_probs=108.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|++|.||++....   .+++|.+.... ........+..|+..++.++|+|++++++.+......++++||+++
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   82 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRF-ESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT   82 (283)
T ss_pred             ceeeecCCCceEEEEEcCCCCcEEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC
Confidence            5679999999999998753   49999987654 2323456778899999999999999999999999999999999975


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                       ++.+.+......+++..+..++.|++.                      +++++|.++++|+|+++.|++....+
T Consensus        83 -~l~~~l~~~~~~~~~~~~~~~~~~i~~----------------------~l~~LH~~~i~H~dl~p~nili~~~~  135 (283)
T cd05118          83 -DLYKLIKDRQRGLPESLIKSYLYQLLQ----------------------GLAFCHSHGILHRDLKPENLLINTEG  135 (283)
T ss_pred             -CHHHHHHhhcccCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCcCHHHEEECCCC
Confidence             888888775447899999999998777                      77888888999999999998887543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.76  E-value=8.5e-18  Score=120.81  Aligned_cols=118  Identities=14%  Similarity=0.094  Sum_probs=86.5

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCC--CCHHHHHHHHHHHHHHHhcCCCceee-eeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYL--DDEKTWEAFKLEVTTFRKTRHENLVL-FMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||+||+|.+..    .+|+|.+.....  .+......+.+|+.++..++|+|+++ ++.    .+..+++||
T Consensus        23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~~~~LVmE   98 (365)
T PRK09188         23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TGKDGLVRG   98 (365)
T ss_pred             ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cCCcEEEEE
Confidence            5789999999999998753    269998754311  12334667899999999999999985 443    245799999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCC-CCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP-SHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~-k~~~~~~~~~  153 (157)
                      |+++++|.. +..    ...   ..++.+                      ++.+|.++|+++|+|||+ |+.|++....
T Consensus        99 ~~~G~~L~~-~~~----~~~---~~~~~~----------------------i~~aL~~lH~~gIiHrDL~KP~NILv~~~  148 (365)
T PRK09188         99 WTEGVPLHL-ARP----HGD---PAWFRS----------------------AHRALRDLHRAGITHNDLAKPQNWLMGPD  148 (365)
T ss_pred             ccCCCCHHH-hCc----cch---HHHHHH----------------------HHHHHHHHHHCCCeeCCCCCcceEEEcCC
Confidence            999999963 211    111   234444                      444888899999999999 9999988543

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.76  E-value=4.6e-18  Score=121.88  Aligned_cols=125  Identities=20%  Similarity=0.269  Sum_probs=100.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-----CceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-----PHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~   73 (157)
                      .+.||+|+||.||++....   .+|+|.+...  ........+..|+.++..++|||++++++.+...     ...++++
T Consensus        10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~   87 (336)
T cd07849          10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQ   87 (336)
T ss_pred             EEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEe
Confidence            4679999999999998754   4999998653  2233456677899999999999999999877553     3579999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+. +++.+.+...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.
T Consensus        88 e~~~-~~l~~~~~~~--~l~~~~~~~i~~ql~~----------------------aL~~LH~~~ivH~dlkp~Nill~~~  142 (336)
T cd07849          88 ELME-TDLYKLIKTQ--HLSNDHIQYFLYQILR----------------------GLKYIHSANVLHRDLKPSNLLLNTN  142 (336)
T ss_pred             hhcc-cCHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCHHHEEECCC
Confidence            9996 4888877643  6899999888887777                      7777888899999999999887654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.76  E-value=1.3e-17  Score=119.33  Aligned_cols=126  Identities=17%  Similarity=0.161  Sum_probs=100.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||++....   .+++|.+.... ......+.+..|+.++..++|||++++.+++.. ....++++||+ 
T Consensus        15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-   92 (328)
T cd07856          15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-   92 (328)
T ss_pred             EEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-
Confidence            4679999999999998754   49999886543 223345667789999999999999999998876 45789999998 


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++|.++++..  .+++..+..++.|++.                      +|.++|+++++|||+++.|++..+.
T Consensus        93 ~~~L~~~~~~~--~~~~~~~~~~~~ql~~----------------------aL~~LH~~~iiH~dl~p~Nili~~~  144 (328)
T cd07856          93 GTDLHRLLTSR--PLEKQFIQYFLYQILR----------------------GLKYVHSAGVVHRDLKPSNILINEN  144 (328)
T ss_pred             ccCHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCHHHEeECCC
Confidence            56898888643  5788888888887666                      7777888888999999888887543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.76  E-value=6.1e-18  Score=118.24  Aligned_cols=128  Identities=23%  Similarity=0.236  Sum_probs=104.8

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +.+.||+|++|.||+|....   .+++|.+.... .. .......+|+..+..+. |||++++++.+...+..+++|||+
T Consensus         3 ~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~-~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           3 VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKF-YS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             eheeeccCCceEEEEEEECCCCcEEEEEEehhhc-cc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            35789999999999999854   49999887643 11 22334456888899998 999999999999999999999999


Q ss_pred             CCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                       +|+|.+.+.... ..+++..+..++.|++.                      ++.++|+++++|+|+++.|++..+.
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~Lh~~~i~H~dl~~~ni~i~~~  135 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQ----------------------GLAHIHKHGFFHRDLKPENLLVSGP  135 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCChhhEEEcCC
Confidence             789999887643 36789999999998777                      7778888899999999999887653

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.76  E-value=4.6e-18  Score=118.65  Aligned_cols=128  Identities=20%  Similarity=0.289  Sum_probs=108.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|.+|.||+|....   .+++|.+.... ........+..|+..++.++|+|++++++.+...+..++++||++ 
T Consensus         4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-   81 (282)
T cd07829           4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-   81 (282)
T ss_pred             ehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-
Confidence            4679999999999999864   59999998653 233445667789999999999999999999999999999999997 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++......+++..+..++.|++.                      +++++|+++++|+|+++.|++....
T Consensus        82 ~~l~~~i~~~~~~~~~~~~~~~~~~i~~----------------------~l~~LH~~~i~H~~l~~~ni~~~~~  134 (282)
T cd07829          82 MDLKKYLDKRPGPLSPNLIKSIMYQLLR----------------------GLAYCHSHRILHRDLKPQNILINRD  134 (282)
T ss_pred             cCHHHHHHhhccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCChheEEEcCC
Confidence            5999999876346899999999987777                      7778888899999999999888663

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0587|consensus

Probab=99.76  E-value=7e-18  Score=128.63  Aligned_cols=128  Identities=23%  Similarity=0.365  Sum_probs=104.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEec-----CCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMK-----PPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-----~~~~~lv   72 (157)
                      .+.+|.|++|.||++..+.   ..|+|+.....    ........|..+++.. .|||++.+++++..     .+.+|+|
T Consensus        24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV   99 (953)
T KOG0587|consen   24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV   99 (953)
T ss_pred             EEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence            4679999999999998766   38899987653    2334556677888877 79999999999975     4789999


Q ss_pred             EecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           73 TSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      ||||.+|+..++++.-. ..+.|..+..|+..++.                      ++..+|.+.++|||+|..|+|..
T Consensus       100 MEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lr----------------------gl~HLH~nkviHRDikG~NiLLT  157 (953)
T KOG0587|consen  100 MEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILR----------------------GLAHLHNNKVIHRDIKGQNVLLT  157 (953)
T ss_pred             eeccCCccHHHHHhhhcccchhhHHHHHHHHHHHH----------------------HHHHHhhcceeeecccCceEEEe
Confidence            99999999999998743 36888888888886666                      88889999999999999998876


Q ss_pred             cccC
Q psy697          152 SAES  155 (157)
Q Consensus       152 ~~~~  155 (157)
                      ....
T Consensus       158 ~e~~  161 (953)
T KOG0587|consen  158 ENAE  161 (953)
T ss_pred             ccCc
Confidence            5443

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.76  E-value=4e-18  Score=121.78  Aligned_cols=129  Identities=22%  Similarity=0.249  Sum_probs=107.9

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC-----ceEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP-----HLAIV   72 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~lv   72 (157)
                      +.+.||+|++|.||+|....   .+++|.+.... .+....+.+..|+..++.++|||++++.+.+...+     .++++
T Consensus         4 i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv   82 (330)
T cd07834           4 LLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIV   82 (330)
T ss_pred             eeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEE
Confidence            35789999999999999754   49999987643 23455677889999999999999999999887765     78999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||++ ++|.+++.... .+++..+..++.|++.                      +++++|+++++|+|+|+.|++...
T Consensus        83 ~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~----------------------~l~~LH~~gi~H~dlkp~nili~~  138 (330)
T cd07834          83 TELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILR----------------------GLKYLHSANVIHRDLKPSNILVNS  138 (330)
T ss_pred             ecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEcC
Confidence            99997 58988887654 7899999999997777                      788888889999999999998876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       139 ~~  140 (330)
T cd07834         139 NC  140 (330)
T ss_pred             CC
Confidence            53

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.76  E-value=1.1e-17  Score=120.32  Aligned_cols=127  Identities=18%  Similarity=0.186  Sum_probs=101.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      .+.||+|+||.||++....   .+|+|.+.... ......+.+.+|+.++.+++||||+++++.+...      ...+++
T Consensus        22 ~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv  100 (345)
T cd07877          22 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV  100 (345)
T ss_pred             EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEE
Confidence            3579999999999998644   49999987532 2233456678899999999999999999987643      346788


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++++ +++|.+++...  .+++..+..++.|+++                      +++++|+++++|||+++.|++...
T Consensus       101 ~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~dlkp~NIll~~  155 (345)
T cd07877         101 THLM-GADLNNIVKCQ--KLTDDHVQFLIYQILR----------------------GLKYIHSADIIHRDLKPSNLAVNE  155 (345)
T ss_pred             ehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCChHHEEEcC
Confidence            8876 78998887643  5899999999888887                      777788889999999999988876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       156 ~~  157 (345)
T cd07877         156 DC  157 (345)
T ss_pred             CC
Confidence            44

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.75  E-value=5.5e-18  Score=117.17  Aligned_cols=130  Identities=22%  Similarity=0.287  Sum_probs=101.0

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCC--CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL--DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      +.+.||+|+||.||++....   ..++|.+.....  ........+..|..++..++|||++++++++......++++||
T Consensus         4 i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (260)
T cd08222           4 LQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEY   83 (260)
T ss_pred             eeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEe
Confidence            35789999999999998755   255555443211  1222344566788899999999999999999988899999999


Q ss_pred             CCCCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           76 CNGHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        76 ~~~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +++++|.+++...   +..+++..+..++.|++.                      +++++|+++++|+|+++.|++..+
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lH~~~i~h~~l~~~nili~~  141 (260)
T cd08222          84 CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLL----------------------GVHYMHQRRILHRDLKAKNIFLKN  141 (260)
T ss_pred             CCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHH----------------------HHHHHHHcCccccCCChhheEeec
Confidence            9999999988642   236899999999998888                      667777788888888888877653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.75  E-value=1.3e-17  Score=119.39  Aligned_cols=127  Identities=16%  Similarity=0.130  Sum_probs=101.3

Q ss_pred             CCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC----CceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP----PHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~----~~~~l   71 (157)
                      .+.||+|+||.||++....     .+|+|.+.... ......+.+.+|+.++..+ +|||++++++.....    ...++
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~   83 (332)
T cd07857           5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYL   83 (332)
T ss_pred             EEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEE
Confidence            4679999999999999854     39999987543 2333456678899999999 699999999875432    45788


Q ss_pred             EEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           72 VTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      ++||+. ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..
T Consensus        84 ~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~givH~dlkp~Nili~  139 (332)
T cd07857          84 YEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILC----------------------GLKYIHSANVLHRDLKPGNLLVN  139 (332)
T ss_pred             EEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCHHHeEEc
Confidence            899885 68999887644 7899999999887777                      88888888999999999998876


Q ss_pred             cc
Q psy697          152 SA  153 (157)
Q Consensus       152 ~~  153 (157)
                      ..
T Consensus       140 ~~  141 (332)
T cd07857         140 AD  141 (332)
T ss_pred             CC
Confidence            54

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0696|consensus

Probab=99.75  E-value=1.4e-19  Score=128.84  Aligned_cols=130  Identities=23%  Similarity=0.203  Sum_probs=111.9

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+||+|+||+|.+++.+++   +|+|++++..+....+.+--+.|-+++.-. +.|.+++++.++.+-+++|+||||+.
T Consensus       354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn  433 (683)
T KOG0696|consen  354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN  433 (683)
T ss_pred             EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence            56899999999999998773   999999887655455555566777777766 67899999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ||+|.-.|++.+ .+-++.+..++.+|+-                      +|=.+|+++|++||+|-.|++..+.+
T Consensus       434 GGDLMyhiQQ~G-kFKEp~AvFYAaEiai----------------------gLFFLh~kgIiYRDLKLDNvmLd~eG  487 (683)
T KOG0696|consen  434 GGDLMYHIQQVG-KFKEPVAVFYAAEIAI----------------------GLFFLHSKGIIYRDLKLDNVMLDSEG  487 (683)
T ss_pred             CchhhhHHHHhc-ccCCchhhhhhHHHHH----------------------HhhhhhcCCeeeeeccccceEeccCC
Confidence            999999999877 8999999999998888                      77789999999999999999876643

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.75  E-value=1.3e-17  Score=119.54  Aligned_cols=126  Identities=16%  Similarity=0.160  Sum_probs=101.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC--CceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP--PHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|....   .+++|.+.... ........+..|+.++.++ +|||++++++++...  ..++++|||
T Consensus        12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~   90 (337)
T cd07852          12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEY   90 (337)
T ss_pred             hHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecc
Confidence            4689999999999998753   48999886533 2233455677899999999 999999999988654  368999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++ ++|.+++...  .+++.....++.|++.                      +|.++|+.+++|||+++.|++....
T Consensus        91 ~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~----------------------~L~~LH~~~i~H~dl~p~nill~~~  143 (337)
T cd07852          91 ME-TDLHAVIRAN--ILEDVHKRYIMYQLLK----------------------ALKYIHSGNVIHRDLKPSNILLNSD  143 (337)
T ss_pred             cc-cCHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEEcCC
Confidence            97 5998888753  6788888888887777                      7778888899999999999887654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.75  E-value=1.2e-17  Score=114.35  Aligned_cols=116  Identities=15%  Similarity=0.121  Sum_probs=95.2

Q ss_pred             CceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCHhHH
Q psy697            8 GHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTN   84 (157)
Q Consensus         8 G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~   84 (157)
                      |.+|.||++....   .+++|.+....        ....+...+....|||++++++.+......+++|||+++|+|.++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   75 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH   75 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence            8899999999865   49999987632        122344445556799999999999999999999999999999999


Q ss_pred             HhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           85 IHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        85 i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +.... .+++..+..++.|++.                      +++++|+++++|||+|+.|++..+.+
T Consensus        76 l~~~~-~l~~~~~~~~~~ql~~----------------------~l~~lH~~~i~H~dlkp~Nil~~~~~  122 (237)
T cd05576          76 ISKFL-NIPEECVKRWAAEMVV----------------------ALDALHREGIVCRDLNPNNILLDDRG  122 (237)
T ss_pred             HHHhc-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCHHHEEEcCCC
Confidence            98755 6899999999887777                      77778888999999999998877654

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0986|consensus

Probab=99.75  E-value=7.4e-19  Score=126.01  Aligned_cols=130  Identities=23%  Similarity=0.188  Sum_probs=111.9

Q ss_pred             CccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ++||+|+||.|+-++-+.+   +|+|.+.+..+....-.....+|-.++.+++.+.||.+--+|.+.+.+.+|+..|+||
T Consensus       191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGG  270 (591)
T KOG0986|consen  191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGG  270 (591)
T ss_pred             EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCC
Confidence            5799999999999987663   8898887765443444556788999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcc-cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKE-KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.-.|-..++ .+++..+..++.+|+-                      +|+.+|+++|++||+||.|+|....+
T Consensus       271 DLkfHiyn~g~~gF~e~ra~FYAAEi~c----------------------GLehlH~~~iVYRDLKPeNILLDd~G  324 (591)
T KOG0986|consen  271 DLKFHIYNHGNPGFDEQRARFYAAEIIC----------------------GLEHLHRRRIVYRDLKPENILLDDHG  324 (591)
T ss_pred             ceeEEeeccCCCCCchHHHHHHHHHHHh----------------------hHHHHHhcceeeccCChhheeeccCC
Confidence            99888876553 5999999999996666                      99999999999999999999987654

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.75  E-value=6.4e-18  Score=121.46  Aligned_cols=123  Identities=16%  Similarity=0.137  Sum_probs=99.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------------
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------------   66 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------------   66 (157)
                      .+.||+|+||.||+|....   .+++|.+....   ......+.+|+.+++.++|||++++++.+...            
T Consensus        10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   86 (342)
T cd07854          10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLT   86 (342)
T ss_pred             EEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccccc
Confidence            4679999999999998854   49999887642   24456788899999999999999999776553            


Q ss_pred             --CceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           67 --PHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        67 --~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                        ...++++||++ ++|.+.+...  .+++..+..++.|++.                      +++++|+++++|||+|
T Consensus        87 ~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~----------------------aL~~LH~~givH~dik  141 (342)
T cd07854          87 ELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLR----------------------GLKYIHSANVLHRDLK  141 (342)
T ss_pred             ccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCC
Confidence              35789999996 5888887642  6899999999998777                      7777888888999999


Q ss_pred             Cccccccc
Q psy697          145 HPLNLSRS  152 (157)
Q Consensus       145 ~~~~~~~~  152 (157)
                      +.|++..+
T Consensus       142 p~Nili~~  149 (342)
T cd07854         142 PANVFINT  149 (342)
T ss_pred             HHHEEEcC
Confidence            88888754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0200|consensus

Probab=99.75  E-value=1.4e-17  Score=127.41  Aligned_cols=128  Identities=21%  Similarity=0.341  Sum_probs=111.9

Q ss_pred             CCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~   70 (157)
                      .+.+|+|.||.|++|....          .+|||.+....  +....+.+..|+.++..+ .|+|++.+.|++...+.++
T Consensus       301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~--~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~  378 (609)
T KOG0200|consen  301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA--SSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY  378 (609)
T ss_pred             cceeecccccceEeEEEeecccccccceEEEEEEeccccc--CcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence            4579999999999998532          48999998764  336788899999999999 7999999999999999999


Q ss_pred             EEEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697           71 IVTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      +++||+..|+|..+++..+               ..++......++.|||.                      +++++.+
T Consensus       379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~----------------------GMe~L~~  436 (609)
T KOG0200|consen  379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIAN----------------------GMEYLAS  436 (609)
T ss_pred             EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHH----------------------HHHHHhh
Confidence            9999999999999999865               23888899999999999                      8888898


Q ss_pred             ccccccCCCCcccccccc
Q psy697          136 KRILARSPSHPLNLSRSA  153 (157)
Q Consensus       136 ~~~~~rd~k~~~~~~~~~  153 (157)
                      +.++|||+.+.|+|....
T Consensus       437 ~~~vHRDLAaRNVLi~~~  454 (609)
T KOG0200|consen  437 VPCVHRDLAARNVLITKN  454 (609)
T ss_pred             CCccchhhhhhhEEecCC
Confidence            899999999999988765

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.75  E-value=7.2e-18  Score=119.27  Aligned_cols=129  Identities=19%  Similarity=0.214  Sum_probs=101.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--------CceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--------PHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~~~~   70 (157)
                      .+.||+|+||.||++....   .+++|.+.... ........+.+|+.+++.++|||++++++.+...        ..++
T Consensus        13 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   91 (311)
T cd07866          13 LGKLGEGTFGEVYKARQIKTGRVVALKKILMHN-EKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVY   91 (311)
T ss_pred             EEEeccCCCEEEEEEEECCCCcEEEEEEEEecc-CCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEE
Confidence            4679999999999999854   49999886543 1122234567899999999999999999877543        3469


Q ss_pred             EEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           71 IVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      +++||+.+ ++...+......+++..+..++.|+++                      +|+++|.++++|+|+++.|++.
T Consensus        92 lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~----------------------al~~lH~~~i~H~dl~p~nil~  148 (311)
T cd07866          92 MVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLE----------------------GINYLHENHILHRDIKAANILI  148 (311)
T ss_pred             EEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEE
Confidence            99999965 777777654446899999999998877                      7778888899999999999988


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      .+..
T Consensus       149 ~~~~  152 (311)
T cd07866         149 DNQG  152 (311)
T ss_pred             CCCC
Confidence            7643

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0614|consensus

Probab=99.74  E-value=1.6e-19  Score=131.05  Aligned_cols=129  Identities=19%  Similarity=0.174  Sum_probs=116.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +..||-|+||.|-++...+   .+|+|++++....+....+....|-.+|..+..|.||++|..|.++.++|++||-|-|
T Consensus       425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG  504 (732)
T KOG0614|consen  425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG  504 (732)
T ss_pred             hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence            3568999999999998866   3899999988877788888889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |.++..++.++ .|+......++.++.+                      +++|+|+++|++||+||+|.+....
T Consensus       505 GElWTiLrdRg-~Fdd~tarF~~acv~E----------------------AfeYLH~k~iIYRDLKPENllLd~~  556 (732)
T KOG0614|consen  505 GELWTILRDRG-SFDDYTARFYVACVLE----------------------AFEYLHRKGIIYRDLKPENLLLDNR  556 (732)
T ss_pred             chhhhhhhhcC-CcccchhhhhHHHHHH----------------------HHHHHHhcCceeccCChhheeeccC
Confidence            99999999877 8999999999997777                      9999999999999999999887543

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.74  E-value=3.6e-17  Score=114.73  Aligned_cols=128  Identities=20%  Similarity=0.204  Sum_probs=101.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||++....   .+|+|.+....  .......+..|+..+.++. |||++++++++...+..+++|||+.
T Consensus         9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~   86 (288)
T cd06616           9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTV--DEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD   86 (288)
T ss_pred             HHHhCCCCceEEEEEEECCCCCEEEEEEehhcc--ChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc
Confidence            3579999999999999855   49999987643  2345667888999999995 9999999999999999999999986


Q ss_pred             CCCHhHHHh---hh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCccccccc
Q psy697           78 GHTLYTNIH---IY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRS  152 (157)
Q Consensus        78 ~g~L~~~i~---~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~  152 (157)
                      . ++.++..   .. ...+++..+..++.|++.                      +++++|++ +++|||+++.|++..+
T Consensus        87 ~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~----------------------~l~~lh~~~~i~H~dlkp~Nil~~~  143 (288)
T cd06616          87 I-SLDKFYKYVYEVLKSVIPEEILGKIAVATVK----------------------ALNYLKEELKIIHRDVKPSNILLDR  143 (288)
T ss_pred             C-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH----------------------HHHHHhhcCCeeccCCCHHHEEEcc
Confidence            4 5555432   21 236888989889887777                      77778764 8999999999998865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      .+
T Consensus       144 ~~  145 (288)
T cd06616         144 NG  145 (288)
T ss_pred             CC
Confidence            43

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.74  E-value=4.2e-17  Score=114.07  Aligned_cols=129  Identities=22%  Similarity=0.303  Sum_probs=101.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc---CCCceeeeeeEEecCCc-----eE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT---RHENLVLFMGACMKPPH-----LA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~-----~~   70 (157)
                      .+.||+|+||.||++....   .+++|.+.... ........+.+|+.++..+   +|||++++++.+...+.     ++
T Consensus         4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~   82 (287)
T cd07838           4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPL-SEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT   82 (287)
T ss_pred             EEEecccCceEEEEEEECCCCCEEEEEEecccc-ccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence            4689999999999999854   59999997643 2222334555677666555   69999999999988776     99


Q ss_pred             EEEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           71 IVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      ++|||+. ++|.+++.... ..+++.++..++.|+++                      +|.++|+.+++|+|+++.|++
T Consensus        83 l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~----------------------al~~LH~~~i~h~~l~~~nil  139 (287)
T cd07838          83 LVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLR----------------------GVDFLHSHRIVHRDLKPQNIL  139 (287)
T ss_pred             EEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeccCChhhEE
Confidence            9999997 48988887643 25899999999998888                      777788888999999999988


Q ss_pred             ccccc
Q psy697          150 SRSAE  154 (157)
Q Consensus       150 ~~~~~  154 (157)
                      .....
T Consensus       140 i~~~~  144 (287)
T cd07838         140 VTSDG  144 (287)
T ss_pred             EccCC
Confidence            76543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.74  E-value=2.8e-17  Score=109.04  Aligned_cols=126  Identities=13%  Similarity=0.079  Sum_probs=90.2

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCC---------------------H--HHHHHHHHHHHHHHhcCCCc
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDD---------------------E--KTWEAFKLEVTTFRKTRHEN   55 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~---------------------~--~~~~~~~~e~~~l~~l~h~n   55 (157)
                      +...||+|++|+||+|....  .+|+|+++......                     .  .....+..|...+..+.+++
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            46789999999999998752  59999998642100                     0  00223457888899998888


Q ss_pred             eeeeeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697           56 LVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus        56 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      +.........  ..+++|||++++++....... ..++......++.|++.                      .+.++|.
T Consensus        81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-~~~~~~~~~~i~~~l~~----------------------~l~~lH~  135 (190)
T cd05145          81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-VPLEEEEAEELYEQVVE----------------------QMRRLYQ  135 (190)
T ss_pred             CCCceEEEec--CCEEEEEEecCCCchhhhhhh-ccCCHHHHHHHHHHHHH----------------------HHHHHHH
Confidence            7544333322  247999999887554432222 25777888888887777                      7778888


Q ss_pred             -ccccccCCCCcccccc
Q psy697          136 -KRILARSPSHPLNLSR  151 (157)
Q Consensus       136 -~~~~~rd~k~~~~~~~  151 (157)
                       ++++|||+|+.|++..
T Consensus       136 ~~givHrDlkP~NIll~  152 (190)
T cd05145         136 EAGLVHGDLSEYNILYH  152 (190)
T ss_pred             hCCEecCCCChhhEEEE
Confidence             8999999999999986

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.73  E-value=6.8e-17  Score=113.86  Aligned_cols=127  Identities=15%  Similarity=0.181  Sum_probs=100.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|++|.||++.+..   .+++|.+....  .......+..|+..+... .|||++++++++......+++|||+.
T Consensus        20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   97 (296)
T cd06618          20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS   97 (296)
T ss_pred             eeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC
Confidence            5689999999999999864   49999997642  223345566677666666 59999999999999999999999985


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~  153 (157)
                       +++..++......+++..+..++.|++.                      ++.++|+ .+++|||+++.|++..+.
T Consensus        98 -~~l~~l~~~~~~~l~~~~~~~i~~~i~~----------------------~l~~lH~~~~i~H~dl~p~nill~~~  151 (296)
T cd06618          98 -TCLDKLLKRIQGPIPEDILGKMTVAIVK----------------------ALHYLKEKHGVIHRDVKPSNILLDAS  151 (296)
T ss_pred             -cCHHHHHHHhcCCCCHHHHHHHHHHHHH----------------------HHHHHHhhCCEecCCCcHHHEEEcCC
Confidence             5788877765447889888888887777                      6777776 488999999999887643

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.73  E-value=1.8e-17  Score=119.17  Aligned_cols=126  Identities=17%  Similarity=0.202  Sum_probs=102.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc------eEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH------LAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~~lv   72 (157)
                      .+.||+|++|.||+|....   .+++|.+.... ........+.+|+.+++.+.|||++++.+.+.....      .+++
T Consensus        20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv   98 (343)
T cd07851          20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLV   98 (343)
T ss_pred             EEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEE
Confidence            3678999999999999854   49999887543 233445667789999999999999999987766544      8999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +||+ +++|.+++...  .+++..+..++.|+++                      +++++|+.+++|||+++.|++..+
T Consensus        99 ~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~----------------------aL~~LH~~gi~H~dlkp~Nill~~  153 (343)
T cd07851          99 THLM-GADLNNIVKCQ--KLSDDHIQFLVYQILR----------------------GLKYIHSAGIIHRDLKPSNIAVNE  153 (343)
T ss_pred             EecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHeEECC
Confidence            9998 66999988752  6899999999998777                      777788889999999999988765


Q ss_pred             c
Q psy697          153 A  153 (157)
Q Consensus       153 ~  153 (157)
                      .
T Consensus       154 ~  154 (343)
T cd07851         154 D  154 (343)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.71  E-value=6.6e-16  Score=102.71  Aligned_cols=124  Identities=27%  Similarity=0.373  Sum_probs=106.7

Q ss_pred             cccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            5 IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      ||+|.+|.||++...+   .+++|.+....  .....+.+.+|+..+..++|++++++++.+......++++|++.+++|
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKED--SSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEecccc--chhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            6899999999999863   59999998643  111456788999999999999999999999998999999999999999


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      .+++......+++..+..++.++++                      +++++|.++++|+|+++.|++...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lh~~~~~H~dl~~~ni~~~~  127 (215)
T cd00180          79 KDLLKENEGKLSEDEILRILLQILE----------------------GLEYLHSNGIIHRDLKPENILLDS  127 (215)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCHhhEEEeC
Confidence            9999875336889999999998887                      777888889999999999998876

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.70  E-value=1.1e-16  Score=115.01  Aligned_cols=125  Identities=17%  Similarity=0.187  Sum_probs=98.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC------ceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP------HLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv   72 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ........+.+|+.++..++|||++++++++....      ..+++
T Consensus        20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   98 (342)
T cd07879          20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF-QSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLV   98 (342)
T ss_pred             EEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc-ccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEE
Confidence            4678999999999998754   59999987543 22333456788999999999999999999887542      46899


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +||+.. ++.....   ..+++..+..++.|++.                      +++++|+++++|||+++.|++..+
T Consensus        99 ~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~----------------------aL~~LH~~~i~H~dlkp~NIll~~  152 (342)
T cd07879          99 MPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLC----------------------GLKYIHSAGIIHRDLKPGNLAVNE  152 (342)
T ss_pred             eccccc-CHHHHHc---CCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEECC
Confidence            999854 6666542   25888888888887777                      777788889999999999988765


Q ss_pred             c
Q psy697          153 A  153 (157)
Q Consensus       153 ~  153 (157)
                      .
T Consensus       153 ~  153 (342)
T cd07879         153 D  153 (342)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0669|consensus

Probab=99.69  E-value=2.2e-19  Score=120.53  Aligned_cols=129  Identities=22%  Similarity=0.316  Sum_probs=103.8

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--------CCceEE
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--------PPHLAI   71 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------~~~~~l   71 (157)
                      .++|+|.||.||+|+.++   .||+|.+--+. -.........+|+.++..++|+|++.++..|.+        ...+|+
T Consensus        23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~yl  101 (376)
T KOG0669|consen   23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYL  101 (376)
T ss_pred             HhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeee
Confidence            478999999999999876   37777553221 122334456789999999999999998877744        235899


Q ss_pred             EEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           72 VTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      |+++|++ +|..++......++...+..++.++.+                      +|.++|+..|+|||.|+.|+|..
T Consensus       102 Vf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~----------------------GL~~iHr~kilHRDmKaaNvLIt  158 (376)
T KOG0669|consen  102 VFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMN----------------------GLYYIHRNKILHRDMKAANVLIT  158 (376)
T ss_pred             eHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHH----------------------HHHHHHHhhHHhhcccHhhEEEc
Confidence            9999977 999999877668999999999997777                      99999999999999999999887


Q ss_pred             cccC
Q psy697          152 SAES  155 (157)
Q Consensus       152 ~~~~  155 (157)
                      ..+.
T Consensus       159 ~dgi  162 (376)
T KOG0669|consen  159 KDGI  162 (376)
T ss_pred             CCce
Confidence            6554

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.68  E-value=8.7e-16  Score=103.60  Aligned_cols=128  Identities=30%  Similarity=0.409  Sum_probs=107.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.+|+|++|.||++....   .+++|.+......  ...+.+.+|+..+..++|+|++++++.+......++++|++++
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            5678999999999999854   4999999864311  2567888999999999999999999999988999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+++......+++..+..++.+++.                      ++.++|.+++.|+|+++.|++....
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lh~~~i~h~di~~~ni~v~~~  134 (225)
T smart00221       82 GDLFDYLRKKGGKLSEEEARFYLRQILE----------------------ALEYLHSLGIVHRDLKPENILLGMD  134 (225)
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEcCC
Confidence            9999999875422788888888887777                      7777888888999999888777653

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.68  E-value=2.8e-16  Score=117.36  Aligned_cols=127  Identities=19%  Similarity=0.225  Sum_probs=86.9

Q ss_pred             CCccccCceeeEEEEEEe-------------------cceEEEEeccCCCCCHHHHH--------------HHHHHHHHH
Q psy697            2 GDRIGKGHFGTVYNGNWH-------------------GEVAVKVLDVDYLDDEKTWE--------------AFKLEVTTF   48 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~-------------------~~~avk~~~~~~~~~~~~~~--------------~~~~e~~~l   48 (157)
                      .++||+|+||.||+|...                   ..+|+|.+....   ....+              ....|+..+
T Consensus       150 ~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~---~~~~~~fl~e~~~~~~~~e~~~vE~~~l  226 (507)
T PLN03224        150 RDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDR---QGVRQDFLKTGTLAKGSAETGMVEAYMC  226 (507)
T ss_pred             eeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccc---hhhHHHHHhhhhhhhcccchhHHHHHHH
Confidence            468999999999999641                   148999986532   11222              233466667


Q ss_pred             HhcCCCce-----eeeeeEEec--------CCceEEEEecCCCCCHhHHHhhhcccC-----------------------
Q psy697           49 RKTRHENL-----VLFMGACMK--------PPHLAIVTSKCNGHTLYTNIHIYKEKF-----------------------   92 (157)
Q Consensus        49 ~~l~h~ni-----v~~~~~~~~--------~~~~~lv~e~~~~g~L~~~i~~~~~~~-----------------------   92 (157)
                      .+++|.++     +.+.+++..        .+..++|+||+++++|.+++....+.+                       
T Consensus       227 ~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~  306 (507)
T PLN03224        227 AKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKR  306 (507)
T ss_pred             HHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccC
Confidence            77766554     556666543        356899999999999999987532111                       


Q ss_pred             CHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           93 ALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        93 ~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++..+..++.                      +++.++.++|.++++|||+|+.|++....
T Consensus       307 ~~~~~~~i~~----------------------ql~~aL~~lH~~~ivHrDLKp~NILl~~~  345 (507)
T PLN03224        307 DINVIKGVMR----------------------QVLTGLRKLHRIGIVHRDIKPENLLVTVD  345 (507)
T ss_pred             CHHHHHHHHH----------------------HHHHHHHHHHHCCeecCCCchHhEEECCC
Confidence            2233333444                      55558888999999999999999987654

>KOG1151|consensus

Probab=99.67  E-value=1.2e-16  Score=115.15  Aligned_cols=129  Identities=19%  Similarity=0.161  Sum_probs=103.7

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHH----HHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEK----TWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~   73 (157)
                      +..||+|+|+.||+|.+-..   +|||+-.....+..+    ......+|.++-+.+.||.||++|+++.- .+.++.|+
T Consensus       468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVL  547 (775)
T KOG1151|consen  468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVL  547 (775)
T ss_pred             HHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeee
Confidence            45799999999999987542   888876554322222    23456688899999999999999999965 57789999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc--cccccCCCCcccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK--RILARSPSHPLNLSR  151 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~--~~~~rd~k~~~~~~~  151 (157)
                      |||+|.+|+.+++.++ .+++.++..|+.||+.                      +|.|+.+.  .|+|=|+|+.|+|..
T Consensus       548 EYceGNDLDFYLKQhk-lmSEKEARSIiMQiVn----------------------AL~YLNEikpPIIHYDLKPgNILLv  604 (775)
T KOG1151|consen  548 EYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVN----------------------ALKYLNEIKPPIIHYDLKPGNILLV  604 (775)
T ss_pred             eecCCCchhHHHHhhh-hhhHHHHHHHHHHHHH----------------------HHHHHhccCCCeeeeccCCccEEEe
Confidence            9999999999999877 7999999999998888                      55555553  589999999999976


Q ss_pred             cc
Q psy697          152 SA  153 (157)
Q Consensus       152 ~~  153 (157)
                      ++
T Consensus       605 ~G  606 (775)
T KOG1151|consen  605 NG  606 (775)
T ss_pred             cC
Confidence            54

>KOG0983|consensus

Probab=99.66  E-value=1.3e-16  Score=108.42  Aligned_cols=128  Identities=14%  Similarity=0.167  Sum_probs=103.7

Q ss_pred             CCccccCceeeEEEEEEecc---eEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~---~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +..||+|+.|.|+++.++++   +|||....+  .+.+.-......++++... .+|+||+.+|+|.....+++.||.+.
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs  174 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS  174 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence            34689999999999999872   899999987  4555566667777777666 59999999999999999999999985


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~~  154 (157)
                      . .+..++++.++++++..+.++...+++                      +|.|+.++ +++|||.|+.|+|..+.+
T Consensus       175 ~-C~ekLlkrik~piPE~ilGk~tva~v~----------------------AL~YLKeKH~viHRDvKPSNILlDe~G  229 (391)
T KOG0983|consen  175 T-CAEKLLKRIKGPIPERILGKMTVAIVK----------------------ALYYLKEKHGVIHRDVKPSNILLDERG  229 (391)
T ss_pred             H-HHHHHHHHhcCCchHHhhhhhHHHHHH----------------------HHHHHHHhcceeecccCccceEEccCC
Confidence            4 677777776668888877777664444                      78888875 699999999999987654

>KOG0596|consensus

Probab=99.66  E-value=4.9e-16  Score=113.95  Aligned_cols=127  Identities=14%  Similarity=0.074  Sum_probs=104.3

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+.+.||++...+  -+|+|.+.... .+....+.+.+|+.+|.++ .|.+|++++++-...+.+|+||||= .
T Consensus       366 lk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d  443 (677)
T KOG0596|consen  366 LKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-D  443 (677)
T ss_pred             HHhhcCCCcceeeeeecCCCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-c
Confidence            5789999999999998765  47877776555 6778899999999999999 7899999999999999999999965 5


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      .+|..++++....++...+..+-.|++.                      .+.++|..||+|-|||+.|-|.-.
T Consensus       444 ~DL~kiL~k~~~~~~~~~lk~ywkqML~----------------------aV~~IH~~gIVHSDLKPANFLlVk  495 (677)
T KOG0596|consen  444 IDLNKILKKKKSIDPDWFLKFYWKQMLL----------------------AVKTIHQHGIVHSDLKPANFLLVK  495 (677)
T ss_pred             ccHHHHHHhccCCCchHHHHHHHHHHHH----------------------HHHHHHHhceeecCCCcccEEEEe
Confidence            6999999986533443355566665555                      888899999999999999876543

>KOG1006|consensus

Probab=99.66  E-value=2.1e-17  Score=111.73  Aligned_cols=128  Identities=23%  Similarity=0.226  Sum_probs=99.6

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ..||.|+||.|++..++.   .+|||.++..  ......+++..|.....+- ++||||++||..+..+..|+-||++. 
T Consensus        70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~--n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-  146 (361)
T KOG1006|consen   70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSN--NIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-  146 (361)
T ss_pred             HHhcCCcchhhhhhhcCccCcEEEEEEeeec--cchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence            468999999999999977   3999999876  4456677788888666655 89999999999999999999999994 


Q ss_pred             CCHhHHHhhh----cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIY----KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~  153 (157)
                      .++..+.+.-    +..+++.-+..+...+..                      +|+++.+ -.|+|||+|++|+|..-.
T Consensus       147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~----------------------AL~yLK~~lkiIHRDvKPSNILldr~  204 (361)
T KOG1006|consen  147 ISLDKLYKRVYSVQKSRIPENILGHITVATVD----------------------ALDYLKEELKIIHRDVKPSNILLDRH  204 (361)
T ss_pred             hhHHHHHHHHHHHHhccCcHhhhhheeeeehh----------------------HHHHHHHHhhhhhccCChhheEEecC
Confidence            4777765531    225777766666554444                      7888886 469999999999998655


Q ss_pred             cC
Q psy697          154 ES  155 (157)
Q Consensus       154 ~~  155 (157)
                      +.
T Consensus       205 G~  206 (361)
T KOG1006|consen  205 GD  206 (361)
T ss_pred             CC
Confidence            43

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.66  E-value=2.7e-15  Score=100.96  Aligned_cols=123  Identities=15%  Similarity=0.172  Sum_probs=94.6

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCH-----HHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDE-----KTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|++|.||+|.+.+ .+++|..........     .....+.+|+.++..+.++++.....++......+++|||
T Consensus         1 ~~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          1 MKLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             CcccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            3679999999999998755 588887654321111     1234577899999999999887777677677788999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      ++|++|.+++....    + ....++.+++.                      .+.++|..+++|+|+++.|++..
T Consensus        81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~----------------------~l~~lH~~~i~H~Dl~p~Nil~~  129 (211)
T PRK14879         81 IEGEPLKDLINSNG----M-EELELSREIGR----------------------LVGKLHSAGIIHGDLTTSNMILS  129 (211)
T ss_pred             eCCcCHHHHHHhcc----H-HHHHHHHHHHH----------------------HHHHHHhCCcccCCCCcccEEEE
Confidence            99999999886432    2 55666666665                      77778888999999999999886

>KOG0668|consensus

Probab=99.65  E-value=1.2e-16  Score=106.21  Aligned_cols=120  Identities=12%  Similarity=0.175  Sum_probs=95.1

Q ss_pred             CCccccCceeeEEEEEEe---cceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC--CceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWH---GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP--PHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~---~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~~lv~e~   75 (157)
                      .+++|+|.++.||.|..-   ..+++|++++.      ......+|+.++..+ .||||+++.+....+  ..+.+++||
T Consensus        43 vrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~  116 (338)
T KOG0668|consen   43 VRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEY  116 (338)
T ss_pred             HHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhh
Confidence            467899999999999852   25899998763      345678999999999 599999999998775  568899999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      .++.+..++.+    .++...+..++.+++.                      +|+++|+.||+|||.||.|++....
T Consensus       117 v~n~Dfk~ly~----tl~d~dIryY~~elLk----------------------ALdyCHS~GImHRDVKPhNvmIdh~  168 (338)
T KOG0668|consen  117 VNNTDFKQLYP----TLTDYDIRYYIYELLK----------------------ALDYCHSMGIMHRDVKPHNVMIDHE  168 (338)
T ss_pred             hccccHHHHhh----hhchhhHHHHHHHHHH----------------------HHhHHHhcCcccccCCcceeeechh
Confidence            99887766654    5788889999886666                      5555666688888888888776543

>KOG1345|consensus

Probab=99.64  E-value=2.6e-16  Score=106.78  Aligned_cols=125  Identities=16%  Similarity=0.160  Sum_probs=100.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeee-EEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMG-ACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~-~~~~~~~~~lv~e~~   76 (157)
                      .+.+|+|-||.+.+++++.   .+++|.++...    .....|.+|...--.+ .|.||+.-|+ .|.+.+.+++++||+
T Consensus        29 ~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~a  104 (378)
T KOG1345|consen   29 NKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFA  104 (378)
T ss_pred             HHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccC
Confidence            4679999999999999977   39999998653    3455677787655556 5788887664 456678889999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +.|+|.+-+...  .+.+.....++.|++.                      +++++|+++++|||+|..|+|.-..+
T Consensus       105 P~gdL~snv~~~--GigE~~~K~v~~ql~S----------------------Ai~fMHsknlVHRdlK~eNiLif~~d  158 (378)
T KOG1345|consen  105 PRGDLRSNVEAA--GIGEANTKKVFAQLLS----------------------AIEFMHSKNLVHRDLKAENILIFDAD  158 (378)
T ss_pred             ccchhhhhcCcc--cccHHHHHHHHHHHHH----------------------HHHHhhccchhhcccccceEEEecCC
Confidence            999999988764  4778877778887666                      88899999999999999999876543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.63  E-value=3.3e-15  Score=99.72  Aligned_cols=118  Identities=19%  Similarity=0.181  Sum_probs=87.3

Q ss_pred             ccccCceeeEEEEEEec-ceEEEEeccCCCCCH-----HHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDE-----KTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .||+|++|.||++.+.+ ++++|..........     .....+.+|+.++..+.++++......+...+..+++|||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            48999999999999766 588888654221111     123567789999999988776554445556667789999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      |++|.+++.... .       .++.+++.                      ++.++|+.+++|+|+++.|++..
T Consensus        81 g~~l~~~~~~~~-~-------~~~~~i~~----------------------~l~~lH~~gi~H~Dl~~~Nil~~  124 (199)
T TIGR03724        81 GKPLKDVIEEGN-D-------ELLREIGR----------------------LVGKLHKAGIVHGDLTTSNIIVR  124 (199)
T ss_pred             CccHHHHHhhcH-H-------HHHHHHHH----------------------HHHHHHHCCeecCCCCcceEEEE
Confidence            999988876432 1       45555444                      77888999999999999999886

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.63  E-value=3e-15  Score=101.17  Aligned_cols=122  Identities=11%  Similarity=0.063  Sum_probs=91.8

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHH------HHHHHHHHHhcCCCceeeeeeEEecC--------
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEA------FKLEVTTFRKTRHENLVLFMGACMKP--------   66 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~------~~~e~~~l~~l~h~niv~~~~~~~~~--------   66 (157)
                      .+.+|+|+||.||++.... .+++|.+......++.....      +.+|+..+.++.|+++..+...+...        
T Consensus        36 ~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~  115 (232)
T PRK10359         36 IKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYA  115 (232)
T ss_pred             EEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccccc
Confidence            4678999999999987644 59999998655333333333      57888999999999999998876533        


Q ss_pred             CceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCc
Q psy697           67 PHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP  146 (157)
Q Consensus        67 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~  146 (157)
                      +..+++|||++|.+|.++..     +++.    ...                      ++...+..+|+.+++|||++++
T Consensus       116 ~~~~lvmEyi~G~tL~~~~~-----~~~~----~~~----------------------~i~~~l~~lH~~gi~H~Dikp~  164 (232)
T PRK10359        116 HTYIMLIEYIEGVELNDMPE-----ISED----VKA----------------------KIKASIESLHQHGMVSGDPHKG  164 (232)
T ss_pred             CCeEEEEEEECCccHHHhhh-----ccHH----HHH----------------------HHHHHHHHHHHcCCccCCCChH
Confidence            35789999999999977632     2222    222                      3444788899999999999999


Q ss_pred             cccccccc
Q psy697          147 LNLSRSAE  154 (157)
Q Consensus       147 ~~~~~~~~  154 (157)
                      |++...++
T Consensus       165 Nili~~~g  172 (232)
T PRK10359        165 NFIVSKNG  172 (232)
T ss_pred             HEEEeCCC
Confidence            99887643

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.63  E-value=3.1e-15  Score=105.49  Aligned_cols=129  Identities=12%  Similarity=0.070  Sum_probs=86.8

Q ss_pred             CCCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHH---------HHHHHHHHHHHHhcCCCceeeeeeEEec
Q psy697            1 MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKT---------WEAFKLEVTTFRKTRHENLVLFMGACMK   65 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~~~~~~~~   65 (157)
                      +.+.||+|+||.||+|....      .+++|...... .....         ......+...+..+.|+|++++++++..
T Consensus        16 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~   94 (294)
T PHA02882         16 IDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN-ETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSF   94 (294)
T ss_pred             EeeEEecCCCceEEEEEEcCCcccccceEEEeccccC-CchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeE
Confidence            35789999999999998744      25566543221 10000         0111223344556799999999987665


Q ss_pred             CC----ceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccccccc
Q psy697           66 PP----HLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILAR  141 (157)
Q Consensus        66 ~~----~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~r  141 (157)
                      ..    ..++++|++. .++.+.+.... ..++..+..++.|++.                      +++++|+++++||
T Consensus        95 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~qi~~----------------------~l~~lH~~~iiHr  150 (294)
T PHA02882         95 KRCRMYYRFILLEKLV-ENTKEIFKRIK-CKNKKLIKNIMKDMLT----------------------TLEYIHEHGISHG  150 (294)
T ss_pred             ecCCceEEEEEEehhc-cCHHHHHHhhc-cCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecC
Confidence            43    3467778764 36666665433 4677777778777776                      8888899999999


Q ss_pred             CCCCccccccccc
Q psy697          142 SPSHPLNLSRSAE  154 (157)
Q Consensus       142 d~k~~~~~~~~~~  154 (157)
                      |+|+.|++..+..
T Consensus       151 DiKp~Nill~~~~  163 (294)
T PHA02882        151 DIKPENIMVDGNN  163 (294)
T ss_pred             CCCHHHEEEcCCC
Confidence            9999999986543

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.62  E-value=9.1e-15  Score=110.84  Aligned_cols=119  Identities=17%  Similarity=0.175  Sum_probs=89.3

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCC-----CHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLD-----DEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||++.+.. .+++|........     .......+.+|+.++..++|++++....++......+++|||
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~  417 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEY  417 (535)
T ss_pred             cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEe
Confidence            4679999999999998865 3444433221101     112245688999999999999998877777777778999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +++++|.+++..         ...++.+++.                      .+.++|+.+++|||+|+.|++..
T Consensus       418 ~~g~~L~~~l~~---------~~~~~~~i~~----------------------~L~~lH~~giiHrDlkp~NILl~  462 (535)
T PRK09605        418 IGGKDLKDVLEG---------NPELVRKVGE----------------------IVAKLHKAGIVHGDLTTSNFIVR  462 (535)
T ss_pred             cCCCcHHHHHHH---------HHHHHHHHHH----------------------HHHHHHhCCCccCCCChHHEEEE
Confidence            999999887751         2345565555                      77788889999999999999983

>KOG1167|consensus

Probab=99.61  E-value=1.6e-15  Score=107.66  Aligned_cols=119  Identities=18%  Similarity=0.203  Sum_probs=101.2

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+++|+|.|+.||++....      .+|+|.+..+..     .....+|++.+..+ .+.|++++.+++...+...+++|
T Consensus        41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-----p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp  115 (418)
T KOG1167|consen   41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-----PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP  115 (418)
T ss_pred             hccccccchhhhhhhhHhhhccccceEeeeecccccC-----chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence            5789999999999998643      399999987642     33478899999999 78999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      |.++-+-.++..    .++..++..++..+..                      +|..+|.+||+|||+|++|.++.
T Consensus       116 ~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~----------------------Al~~~h~~GIvHRDiKpsNFL~n  166 (418)
T KOG1167|consen  116 YFEHDRFRDLYR----SLSLAEIRWYLRNLLK----------------------ALAHLHKNGIVHRDIKPSNFLYN  166 (418)
T ss_pred             ccCccCHHHHHh----cCCHHHHHHHHHHHHH----------------------HhhhhhccCccccCCCccccccc
Confidence            999988888776    4677788888775444                      89999999999999999998875

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.61  E-value=7.9e-15  Score=99.75  Aligned_cols=120  Identities=23%  Similarity=0.324  Sum_probs=101.0

Q ss_pred             ceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCHhHHH
Q psy697            9 HFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNI   85 (157)
Q Consensus         9 ~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~i   85 (157)
                      +||.||++...+   .+++|.+......  ...+.+..|+..++.++|+|++++.+.+......++++||+++++|..++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~   78 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIK--KKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL   78 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccc--cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence            589999999865   4999999764311  11678889999999999999999999999989999999999999999999


Q ss_pred             hhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           86 HIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      .... .+++..+..++.+++.                      ++.++|..+++|+|+++.|++..+.
T Consensus        79 ~~~~-~~~~~~~~~~~~~l~~----------------------~l~~lh~~~i~h~~i~~~ni~~~~~  123 (244)
T smart00220       79 KKRG-RLSEDEARFYARQILS----------------------ALEYLHSNGIIHRDLKPENILLDED  123 (244)
T ss_pred             Hhcc-CCCHHHHHHHHHHHHH----------------------HHHHHHHcCeecCCcCHHHeEECCC
Confidence            8654 4788888888887777                      7777888899999999999888764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0603|consensus

Probab=99.60  E-value=2.1e-15  Score=111.93  Aligned_cols=122  Identities=19%  Similarity=0.187  Sum_probs=97.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      ...+|.|+|+.|..+.+..   ..++|++.....       ...+|+.++... +|||++++.+.+......|+|||.+.
T Consensus       327 ~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~  399 (612)
T KOG0603|consen  327 REELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLD  399 (612)
T ss_pred             ccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCceeeeeehhcc
Confidence            3458999999999999866   489999987521       123456555554 89999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc-cccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS-RSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~-~~~~  154 (157)
                      ++.+.+.+...+ .+. .++..++.+++.                      .++++|+++++|||+|+.|+|. .+.+
T Consensus       400 g~ell~ri~~~~-~~~-~e~~~w~~~lv~----------------------Av~~LH~~gvvhRDLkp~NIL~~~~~g  453 (612)
T KOG0603|consen  400 GGELLRRIRSKP-EFC-SEASQWAAELVS----------------------AVDYLHEQGVVHRDLKPGNILLDGSAG  453 (612)
T ss_pred             ccHHHHHHHhcc-hhH-HHHHHHHHHHHH----------------------HHHHHHhcCeeecCCChhheeecCCCC
Confidence            998888877643 233 666677775555                      8889999999999999999999 4655

>KOG0984|consensus

Probab=99.59  E-value=6.5e-15  Score=96.55  Aligned_cols=128  Identities=16%  Similarity=0.184  Sum_probs=100.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +..||+|++|.|-+-++..   -+|+|.+..+. + .....+..+|+.+..+. .+|.+|.++|.+.....+|+.||.++
T Consensus        51 i~elGrGayG~vekmrh~~sg~imAvKri~~tv-n-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~  128 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV-N-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD  128 (282)
T ss_pred             hhhhcCCccchhhheeeccCCeEEEEeeehhhc-C-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh
Confidence            3579999999988887744   28999998764 4 44455667788776665 89999999999999999999999995


Q ss_pred             CCCHhHHHhh---hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCcccccccc
Q psy697           78 GHTLYTNIHI---YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~  153 (157)
                       .||..+.++   .++..++..+.+++..+..                      +|+++|++ .++|||.|++|+|..-.
T Consensus       129 -tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~----------------------al~~L~~kL~vIHRDvKPsNiLIn~~  185 (282)
T KOG0984|consen  129 -TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVH----------------------ALEFLHSKLSVIHRDVKPSNILINYD  185 (282)
T ss_pred             -hhHHHHHHHHHhcCCcCchHHhhHhHHHHHH----------------------HHHHHHHHhhhhhccCCcceEEEccC
Confidence             488777654   3447888888888775444                      88888876 58999999999987644


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       186 G  186 (282)
T KOG0984|consen  186 G  186 (282)
T ss_pred             C
Confidence            3

>KOG0664|consensus

Probab=99.57  E-value=1.7e-16  Score=108.10  Aligned_cols=126  Identities=21%  Similarity=0.212  Sum_probs=102.3

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-----CceEEEEe
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-----PHLAIVTS   74 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e   74 (157)
                      +.||=|+||.||.+++.+   .+++|.+.... .+-.....+.+|+.++..++|.|+....+....+     ..+|+++|
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            578999999999998865   38888886544 3444567788899999999999999888776554     24778888


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++ ..+|...|-..+ .++...+.-+..||.+                      +|+|+|+.+|+|||+|++|.|..|.
T Consensus       138 Lm-QSDLHKIIVSPQ-~Ls~DHvKVFlYQILR----------------------GLKYLHsA~ILHRDIKPGNLLVNSN  192 (449)
T KOG0664|consen  138 LM-QSDLHKIIVSPQ-ALTPDHVKVFVYQILR----------------------GLKYLHTANILHRDIKPGNLLVNSN  192 (449)
T ss_pred             HH-HhhhhheeccCC-CCCcchhhhhHHHHHh----------------------hhHHHhhcchhhccCCCccEEeccC
Confidence            88 458888777655 7888888888887777                      9999999999999999999999875

>KOG1290|consensus

Probab=99.57  E-value=3e-14  Score=103.37  Aligned_cols=126  Identities=22%  Similarity=0.264  Sum_probs=101.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-----C---CceeeeeeEEecC----
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-----H---ENLVLFMGACMKP----   66 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~~----   66 (157)
                      .++||=|-|++||+|-+..   -||+|+++..    .-..+..+.|+.+++++.     +   ..+|++++.|...    
T Consensus        83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG  158 (590)
T KOG1290|consen   83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNG  158 (590)
T ss_pred             EEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCC
Confidence            4689999999999998744   3999999753    456778899999999872     2   3689999998764    


Q ss_pred             CceEEEEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCC
Q psy697           67 PHLAIVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPS  144 (157)
Q Consensus        67 ~~~~lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k  144 (157)
                      .++++|+|++ |-+|..+|.... ..++...+..|+.||+.                      +|+|+|++ +|+|-|+|
T Consensus       159 ~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~----------------------GLdYLH~ecgIIHTDlK  215 (590)
T KOG1290|consen  159 QHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLT----------------------GLDYLHRECGIIHTDLK  215 (590)
T ss_pred             cEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHH----------------------HHHHHHHhcCccccCCC
Confidence            5799999999 669999998754 24777777666665555                      99999975 79999999


Q ss_pred             Cccccccccc
Q psy697          145 HPLNLSRSAE  154 (157)
Q Consensus       145 ~~~~~~~~~~  154 (157)
                      +.|+|.-+.|
T Consensus       216 PENvLl~~~e  225 (590)
T KOG1290|consen  216 PENVLLCSTE  225 (590)
T ss_pred             cceeeeeccc
Confidence            9999988774

>KOG1163|consensus

Probab=99.56  E-value=2.4e-14  Score=95.94  Aligned_cols=121  Identities=17%  Similarity=0.215  Sum_probs=95.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +++||+|+||.+|+|..-.   .||+|.-+... .    -..+.-|..+...++ ...|..+.-+......-.+|||.. 
T Consensus        20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-   93 (341)
T KOG1163|consen   20 VRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-K----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-   93 (341)
T ss_pred             EEeecCCchhheeeeeeccCCceEEEEeecccC-C----CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-
Confidence            5789999999999998744   59999876543 1    123566778888884 467777766666677788999998 


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      |.+|.++.......++...++.++-|++.                      .++++|.++.+|||+||.|-|.
T Consensus        94 GPsLEdLfnfC~R~ftmkTvLMLaDQml~----------------------RiEyvH~r~fiHRDIKPdNFLM  144 (341)
T KOG1163|consen   94 GPSLEDLFNFCSRRFTMKTVLMLADQMLS----------------------RIEYVHLRNFIHRDIKPDNFLM  144 (341)
T ss_pred             CccHHHHHHHHhhhhhHHhHHHHHHHHHH----------------------HHHHHHhhccccccCCccceee
Confidence            77999999876547888888777775555                      9999999999999999998765

>KOG0671|consensus

Probab=99.56  E-value=8.9e-15  Score=103.05  Aligned_cols=126  Identities=21%  Similarity=0.230  Sum_probs=104.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC--C----ceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH--E----NLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~----niv~~~~~~~~~~~~~lv   72 (157)
                      .+.+|+|+||.|..+-+..   .+|+|+++..    ...+++..-|++++.++.+  |    ..+++.+|+.-.++..++
T Consensus        94 ~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCiv  169 (415)
T KOG0671|consen   94 VDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIV  169 (415)
T ss_pred             hhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEE
Confidence            5679999999999998755   4999998742    4567788889999999832  2    357777888889999999


Q ss_pred             EecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           73 TSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +|.+ |.+++++++.++ .+++...+..++.|+++                      ++.++|+.+++|=|+|++|++..
T Consensus       170 fell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~----------------------sv~fLh~~kl~HTDLKPENILfv  226 (415)
T KOG0671|consen  170 FELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLE----------------------SVAFLHDLKLTHTDLKPENILFV  226 (415)
T ss_pred             Eecc-ChhHHHHhccCCccccchHHHHHHHHHHHH----------------------HHHHHHhcceeecCCChheEEEe
Confidence            9988 669999999754 36899999999998888                      77779999999999999999987


Q ss_pred             ccc
Q psy697          152 SAE  154 (157)
Q Consensus       152 ~~~  154 (157)
                      +.+
T Consensus       227 ss~  229 (415)
T KOG0671|consen  227 SSE  229 (415)
T ss_pred             ccc
Confidence            765

>smart00090 RIO RIO-like kinase

Probab=99.56  E-value=2.8e-14  Score=97.70  Aligned_cols=124  Identities=16%  Similarity=0.065  Sum_probs=85.6

Q ss_pred             CCCccccCceeeEEEEE-E-ec--ceEEEEeccCCCCC----------H-----------HHHHHHHHHHHHHHhcCCC-
Q psy697            1 MGDRIGKGHFGTVYNGN-W-HG--EVAVKVLDVDYLDD----------E-----------KTWEAFKLEVTTFRKTRHE-   54 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~-~-~~--~~avk~~~~~~~~~----------~-----------~~~~~~~~e~~~l~~l~h~-   54 (157)
                      +.+.||+|++|.||+|. . ..  ++|+|.+.......          .           .....+..|..++..+.+. 
T Consensus        32 i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~  111 (237)
T smart00090       32 IGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAG  111 (237)
T ss_pred             hCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            35789999999999998 3 22  59999987542100          0           0123456899999998653 


Q ss_pred             -ceeeeeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697           55 -NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus        55 -niv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                       .+.++++.    ...+++|||+++.++........ .+.......++.|++.                      .+.++
T Consensus       112 i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~----------------------~l~~L  164 (237)
T smart00090      112 VPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILE----------------------EMRKL  164 (237)
T ss_pred             CCCCeeeEe----cCceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHH----------------------HHHHH
Confidence             23344432    23589999999988776543222 3455555566665555                      88889


Q ss_pred             cccc-ccccCCCCcccccc
Q psy697          134 PKKR-ILARSPSHPLNLSR  151 (157)
Q Consensus       134 ~~~~-~~~rd~k~~~~~~~  151 (157)
                      |.++ ++|||+|+.|++..
T Consensus       165 H~~g~iiH~Dikp~NIli~  183 (237)
T smart00090      165 YKEGELVHGDLSEYNILVH  183 (237)
T ss_pred             HhcCCEEeCCCChhhEEEE
Confidence            9999 99999999999876

>KOG1164|consensus

Probab=99.55  E-value=2.7e-14  Score=102.02  Aligned_cols=127  Identities=20%  Similarity=0.224  Sum_probs=98.5

Q ss_pred             CCCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC----CCceeeeeeEE-ecCCceEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR----HENLVLFMGAC-MKPPHLAI   71 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~----h~niv~~~~~~-~~~~~~~l   71 (157)
                      +.+.||+|+||.||.+....    .+|+|.........   ...+..|..++..+.    .+++..+++.. .....-++
T Consensus        22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            35789999999999999755    38888877642111   115667777777775    35788888888 46777899


Q ss_pred             EEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           72 VTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ||+.+ |.+|.++..... ..++...+..++.|++.                      .|+++|+.|.+|||+|+.|...
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~----------------------~l~~lH~~G~iHRDiKp~N~~~  155 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLN----------------------ALEDLHSKGFIHRDIKPENFVV  155 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHH----------------------HHHHHHhcCcccCCcCHHHeee
Confidence            99988 779999886544 47899999999887777                      8888999999999999999776


Q ss_pred             ccc
Q psy697          151 RSA  153 (157)
Q Consensus       151 ~~~  153 (157)
                      .-.
T Consensus       156 g~~  158 (322)
T KOG1164|consen  156 GQS  158 (322)
T ss_pred             cCC
Confidence            543

>KOG1027|consensus

Probab=99.55  E-value=7.9e-15  Score=111.81  Aligned_cols=121  Identities=22%  Similarity=0.280  Sum_probs=93.5

Q ss_pred             CccccCceee-EEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGT-VYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~-v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.+|.|+.|+ ||+|.+.+ .||||.+-.      +...-..+|+.++..- .||||+++++.-.+....||..|.| ..
T Consensus       515 eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~  587 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVYEGREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-AC  587 (903)
T ss_pred             HHcccCCCCcEEEEEeeCCceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hh
Confidence            4577888876 89999866 699998854      3344567899999988 8999999999888889999999999 45


Q ss_pred             CHhHHHhhhcccCCH---HHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           80 TLYTNIHIYKEKFAL---NKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +|.+++...+..+..   -..+....                      ++.+++..+|.-+|+|||+||+|+|...
T Consensus       588 sL~dlie~~~~d~~~~~~i~~~~~l~----------------------q~~~GlaHLHsl~iVHRDLkPQNILI~~  641 (903)
T KOG1027|consen  588 SLQDLIESSGLDVEMQSDIDPISVLS----------------------QIASGLAHLHSLKIVHRDLKPQNILISV  641 (903)
T ss_pred             hHHHHHhccccchhhcccccHHHHHH----------------------HHHHHHHHHHhcccccccCCCceEEEEc
Confidence            999999874111111   12233334                      4555999999999999999999999766

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.55  E-value=1.6e-14  Score=109.89  Aligned_cols=122  Identities=17%  Similarity=0.192  Sum_probs=76.6

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeE------EecCCc
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA------CMKPPH   68 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~------~~~~~~   68 (157)
                      .+.||+|+||.||+|.+..       .+|+|.+....  .   .+....+  .+....+.++..+...      ......
T Consensus       137 ~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~---~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (566)
T PLN03225        137 GKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--A---VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDE  209 (566)
T ss_pred             eEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--h---hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCc
Confidence            4689999999999999843       49999876431  1   1111111  1111112222221111      234567


Q ss_pred             eEEEEecCCCCCHhHHHhhhcccCCH-------------------HHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q psy697           69 LAIVTSKCNGHTLYTNIHIYKEKFAL-------------------NKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKS  129 (157)
Q Consensus        69 ~~lv~e~~~~g~L~~~i~~~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~  129 (157)
                      .++++||+++++|.+++.........                   ..+..++.                      +++.+
T Consensus       210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~----------------------qll~a  267 (566)
T PLN03225        210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMR----------------------QILFA  267 (566)
T ss_pred             eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHH----------------------HHHHH
Confidence            89999999999999998754211110                   11112222                      66669


Q ss_pred             HhccccccccccCCCCccccccc
Q psy697          130 LEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus       130 l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+++|+++|+|||+|+.|+|...
T Consensus       268 L~yLH~~gIiHRDLKP~NILl~~  290 (566)
T PLN03225        268 LDGLHSTGIVHRDVKPQNIIFSE  290 (566)
T ss_pred             HHHHHHCCEEeCcCCHHHEEEeC
Confidence            99999999999999999999865

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.53  E-value=1.1e-13  Score=92.11  Aligned_cols=119  Identities=10%  Similarity=0.016  Sum_probs=82.5

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCC-HHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDD-EKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ...|++|+||+|+.+...+ +++.+.+....... ......+.+|+.++.+++ ++++++++++    +..+++|||++|
T Consensus         7 ~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G   82 (218)
T PRK12274          7 NEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAG   82 (218)
T ss_pred             ceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecC
Confidence            4679999999999887755 46655554321111 112335789999999994 5788888875    346899999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCC-CCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP-SHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~-k~~~~~~~~~~  154 (157)
                      .+|.+.+..       . ...++.|                      +...++++|+++++|||+ |+.|++..+.+
T Consensus        83 ~~L~~~~~~-------~-~~~~~~q----------------------i~~~L~~lH~~GIvHrDL~kp~NILv~~~g  129 (218)
T PRK12274         83 AAMYQRPPR-------G-DLAYFRA----------------------ARRLLQQLHRCGVAHNDLAKEANWLVQEDG  129 (218)
T ss_pred             ccHHhhhhh-------h-hHHHHHH----------------------HHHHHHHHHHCcCccCCCCCcceEEEcCCC
Confidence            888654321       1 1223444                      344788899999999999 67898886544

>KOG1165|consensus

Probab=99.50  E-value=7.9e-14  Score=97.28  Aligned_cols=122  Identities=18%  Similarity=0.260  Sum_probs=99.1

Q ss_pred             CCCccccCceeeEEEEEE--ec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecC
Q psy697            1 MGDRIGKGHFGTVYNGNW--HG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~--~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      ++++||+|+||.++.|.-  .+ +||+|.-+..     +.+.++..|.+..+.+ ..++|...|-+....-+-.+|+|+.
T Consensus        32 VGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   32 VGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             eccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            578999999999999974  33 6999987653     2345677888888888 6788888876666666668899998


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                       |.+|.++..-.+..|+...+..++.|++.                      .++++|++..|+||+|+.|-|.
T Consensus       107 -GPSLEDLFD~CgR~FSvKTV~miA~Qmi~----------------------rie~vH~k~LIYRDIKPdNFLI  157 (449)
T KOG1165|consen  107 -GPSLEDLFDLCGRRFSVKTVAMIAKQMIT----------------------RIEYVHEKDLIYRDIKPDNFLI  157 (449)
T ss_pred             -CcCHHHHHHHhcCcccHHhHHHHHHHHHH----------------------HHHHHHhcceeecccCccceee
Confidence             77999999887767999988888886555                      8999999999999999998764

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.46  E-value=2.1e-12  Score=90.92  Aligned_cols=131  Identities=24%  Similarity=0.234  Sum_probs=108.4

Q ss_pred             CCccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCC-ceeeeeeEEecCCceEEEEecCCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE-NLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      .+.||.|+|+.||.+.....+++|.+.............+.+|...+..+.|+ +++++.+.+......+++++++.+++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~   84 (384)
T COG0515           5 LRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGS   84 (384)
T ss_pred             EEeecCCCCeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCc
Confidence            46789999999999999977899999876533333577889999999999888 79999999977777899999999999


Q ss_pred             HhHHHhhhc--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           81 LYTNIHIYK--EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        81 L~~~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +.+++....  ..++......++.|++.                      +++++|+.+++|||+|+.|++....+
T Consensus        85 l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~l~~~H~~~~~hrd~kp~nil~~~~~  138 (384)
T COG0515          85 LEDLLKKIGRKGPLSESEALFILAQILS----------------------ALEYLHSKGIIHRDIKPENILLDRDG  138 (384)
T ss_pred             HHHHHHhcccccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCHHHeeecCCC
Confidence            997776543  15788888888887777                      56688888899999999999887654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.44  E-value=6.7e-13  Score=88.61  Aligned_cols=119  Identities=19%  Similarity=0.132  Sum_probs=80.9

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCC-------------------HHHHHHHHHHHHHHHhcCCCc--eee
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDD-------------------EKTWEAFKLEVTTFRKTRHEN--LVL   58 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~-------------------~~~~~~~~~e~~~l~~l~h~n--iv~   58 (157)
                      .+.||+|+||.||++....  .+++|+++......                   ......+..|...+..+.+++  ++.
T Consensus        20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~   99 (198)
T cd05144          20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK   99 (198)
T ss_pred             CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence            5789999999999998743  59999876532000                   001223567888888887764  344


Q ss_pred             eeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccc
Q psy697           59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRI  138 (157)
Q Consensus        59 ~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~  138 (157)
                      .++    ....+++|||+++++|......       .....++.+                      +..++.++|..++
T Consensus       100 ~~~----~~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~----------------------i~~~l~~lh~~gi  146 (198)
T cd05144         100 PID----WNRHAVVMEYIDGVELYRVRVL-------EDPEEVLDE----------------------ILEEIVKAYKHGI  146 (198)
T ss_pred             eee----cCCceEEEEEeCCcchhhcccc-------ccHHHHHHH----------------------HHHHHHHHHHCCC
Confidence            433    2456899999999988665331       122334443                      4447777899999


Q ss_pred             cccCCCCcccccccc
Q psy697          139 LARSPSHPLNLSRSA  153 (157)
Q Consensus       139 ~~rd~k~~~~~~~~~  153 (157)
                      +|||+++.|++....
T Consensus       147 ~H~Dl~p~Nill~~~  161 (198)
T cd05144         147 IHGDLSEFNILVDDD  161 (198)
T ss_pred             CcCCCCcccEEEcCC
Confidence            999999999988653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.38  E-value=4.8e-12  Score=80.28  Aligned_cols=116  Identities=12%  Similarity=0.023  Sum_probs=88.3

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC--CceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH--ENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.+|+|.++.||++...+ .+++|......   .  ...+..|...+..+.+  .++++++.+....+..++++||+++
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~---~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g   77 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSRE---K--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG   77 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCC---c--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence            5789999999999999866 58999886642   1  4567889999999966  5888888888777889999999988


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc---ccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK---KRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~---~~~~~rd~k~~~~~~~~  152 (157)
                      +++..+        +......+..+++.                      .+..+|.   .+++|+|+++.|++...
T Consensus        78 ~~~~~~--------~~~~~~~~~~~~~~----------------------~l~~lh~~~~~~i~H~Dl~~~Nil~~~  124 (155)
T cd05120          78 ETLDEV--------SEEEKEDIAEQLAE----------------------LLAKLHQLPLLVLCHGDLHPGNILVDD  124 (155)
T ss_pred             eecccC--------CHHHHHHHHHHHHH----------------------HHHHHhCCCceEEEecCCCcceEEEEC
Confidence            776543        33444455665555                      3444443   68999999999998876

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.37  E-value=6.5e-12  Score=82.99  Aligned_cols=122  Identities=16%  Similarity=0.121  Sum_probs=74.7

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHH---------------------HHHHHHHHHhcCCC--c
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEA---------------------FKLEVTTFRKTRHE--N   55 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~---------------------~~~e~~~l~~l~h~--n   55 (157)
                      +++.||+|+||.||+|....  ++|+|++.............                     ...|...+..+.+.  .
T Consensus         1 ~~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           1 VGGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CCcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            46789999999999998763  59999987643111111111                     12445555555332  2


Q ss_pred             eeeeeeEEecCCceEEEEecCCCCCHhH-HHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697           56 LVLFMGACMKPPHLAIVTSKCNGHTLYT-NIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus        56 iv~~~~~~~~~~~~~lv~e~~~~g~L~~-~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      +.+.++.    ...+++|||++++++.. .+....  .. .+...++.+++                      ..+..+|
T Consensus        81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~----------------------~~l~~lh  131 (187)
T cd05119          81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQIL----------------------ELMRKLY  131 (187)
T ss_pred             CCceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHH----------------------HHHHHHh
Confidence            3333332    24589999999855322 122111  11 34445555444                      4788888


Q ss_pred             c-ccccccCCCCcccccc
Q psy697          135 K-KRILARSPSHPLNLSR  151 (157)
Q Consensus       135 ~-~~~~~rd~k~~~~~~~  151 (157)
                      . .+++|+|+++.|++..
T Consensus       132 ~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119         132 REAGLVHGDLSEYNILVD  149 (187)
T ss_pred             hccCcCcCCCChhhEEEE
Confidence            8 8999999999999876

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.37  E-value=1.1e-11  Score=85.03  Aligned_cols=124  Identities=12%  Similarity=0.033  Sum_probs=86.0

Q ss_pred             Cccc-cCceeeEEEEEEec-ceEEEEeccCCC----------CCHHHHHHHHHHHHHHHhcCCCce--eeeeeEEecC-C
Q psy697            3 DRIG-KGHFGTVYNGNWHG-EVAVKVLDVDYL----------DDEKTWEAFKLEVTTFRKTRHENL--VLFMGACMKP-P   67 (157)
Q Consensus         3 ~~lg-~G~~g~v~~~~~~~-~~avk~~~~~~~----------~~~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~-~   67 (157)
                      ..+| .|+.|+||.+...+ .+++|.+.....          .+......+.+|+.++..+.++++  +..++..... .
T Consensus        37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~  116 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG  116 (239)
T ss_pred             ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence            3576 78888998888755 588887754211          112334567889999999988775  5555553332 2


Q ss_pred             ---ceEEEEecCCC-CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCC
Q psy697           68 ---HLAIVTSKCNG-HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP  143 (157)
Q Consensus        68 ---~~~lv~e~~~~-g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~  143 (157)
                         ..+++||++++ .+|.+++...  .++...    +.+++.                      .+.++|+++|+|||+
T Consensus       117 ~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~~----~~~i~~----------------------~l~~lH~~GI~HrDl  168 (239)
T PRK01723        117 LFYRADILIERIEGARDLVALLQEA--PLSEEQ----WQAIGQ----------------------LIARFHDAGVYHADL  168 (239)
T ss_pred             cceeeeEEEEecCCCCCHHHHHhcC--CCCHHH----HHHHHH----------------------HHHHHHHCCCCCCCC
Confidence               23599999997 6898888642  444432    333344                      788899999999999


Q ss_pred             CCccccccccc
Q psy697          144 SHPLNLSRSAE  154 (157)
Q Consensus       144 k~~~~~~~~~~  154 (157)
                      |+.|+|....+
T Consensus       169 kp~NILv~~~~  179 (239)
T PRK01723        169 NAHNILLDPDG  179 (239)
T ss_pred             CchhEEEcCCC
Confidence            99999987544

>KOG1166|consensus

Probab=99.36  E-value=7.6e-13  Score=104.13  Aligned_cols=121  Identities=18%  Similarity=0.137  Sum_probs=92.4

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC---CCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR---HENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+.+|+|+||+||.|...+  .+|+|+-.+...+.--..      .+++.+++   -+.+..+..++...+.-++++||.
T Consensus       703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~------~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~  776 (974)
T KOG1166|consen  703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYIC------LQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYS  776 (974)
T ss_pred             EeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeeh------HHHHHhhchhhhcchHHHHHHHccCCcceeeeecc
Confidence            4679999999999999866  499998877542221112      23333343   234455566666677788999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +.|+|.+++...+ .+++..+..+..|+++                      .++.+|..+|||+|+|+.|-+.+
T Consensus       777 ~~Gtlld~~N~~~-~m~e~lv~~~~~qml~----------------------ive~lH~~~IIHgDiKPDNfll~  828 (974)
T KOG1166|consen  777 PYGTLLDLINTNK-VMDEYLVMFFSCQMLR----------------------IVEHLHAMGIIHGDIKPDNFLLR  828 (974)
T ss_pred             ccccHHHhhccCC-CCCchhhhHHHHHHHH----------------------HHHHHHhcceecccCCcceeEee
Confidence            9999999999655 7899999999998777                      78889999999999999997654

>KOG0665|consensus

Probab=99.36  E-value=6.1e-13  Score=92.15  Aligned_cols=109  Identities=15%  Similarity=0.180  Sum_probs=88.1

Q ss_pred             cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEEEecCCCCCHhHHHhhhcccCC
Q psy697           20 GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIVTSKCNGHTLYTNIHIYKEKFA   93 (157)
Q Consensus        20 ~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv~e~~~~g~L~~~i~~~~~~~~   93 (157)
                      .++++|...... .+...++...+|..++..++|+|+++++.++...      ...|++||++. .+|.+.+..   .++
T Consensus        42 ~~v~ikk~~~pf-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~---elD  116 (369)
T KOG0665|consen   42 RPVAIKKLSRPF-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILM---ELD  116 (369)
T ss_pred             CceehhhhcCcc-ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHH---hcc
Confidence            358888776654 4455567788999999999999999999998664      35899999995 588888873   456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           94 LNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        94 ~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      =..+..+..|.+.                      +.+++|+.+|+|||+||.|++.++.+.
T Consensus       117 H~tis~i~yq~~~----------------------~ik~lhs~~IihRdLkPsnivv~~~~~  156 (369)
T KOG0665|consen  117 HETISYILYQMLC----------------------GIKHLHSAGIIHRDLKPSNIVVNSDCT  156 (369)
T ss_pred             hHHHHHHHHHHHH----------------------HHHHHHhcceeecccCcccceecchhh
Confidence            6777788886666                      888899999999999999999988654

>KOG1024|consensus

Probab=99.33  E-value=9.7e-12  Score=88.74  Aligned_cols=102  Identities=18%  Similarity=0.308  Sum_probs=79.7

Q ss_pred             CccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-CceEEEE
Q psy697            3 DRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-PHLAIVT   73 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~   73 (157)
                      ..+.+|+||.||.|.+.+        .+-+|.+...  .++-....+..|.-++.+..|||+.++.+.+... ..++.+.
T Consensus       290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y  367 (563)
T KOG1024|consen  290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLY  367 (563)
T ss_pred             hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEE
Confidence            356789999999997654        2567766543  3344566788899999999999999999888664 5678888


Q ss_pred             ecCCCCCHhHHHhhhc-------ccCCHHHHHHHHHHHHH
Q psy697           74 SKCNGHTLYTNIHIYK-------EKFALNKMSTVGQQISQ  106 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~-------~~~~~~~~~~~~~~i~~  106 (157)
                      .+..-|+|..+++..+       ..++..+...++.|++.
T Consensus       368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~  407 (563)
T KOG1024|consen  368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAM  407 (563)
T ss_pred             eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHH
Confidence            9998899999998322       24777788999999998

>KOG0195|consensus

Probab=99.31  E-value=6.1e-13  Score=90.93  Aligned_cols=113  Identities=22%  Similarity=0.421  Sum_probs=92.2

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      ..+|.+...|..|+|++.+ .++.|++.... ......+.|..|...++-++||||+.+.+.|.+++.+.++..|++.|+
T Consensus       195 ~tkl~e~hsgelwrgrwqgndivakil~vr~-~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  195 ITKLAESHSGELWRGRWQGNDIVAKILNVRE-VTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhhhccCCCcccccccccCcchhhhhhhhhh-cchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence            3567788889999999977 57778877654 344456678889999999999999999999999999999999999999


Q ss_pred             HhHHHhhhcc-cCCHHHHHHHHHHHHHHHHHHhhcCC
Q psy697           81 LYTNIHIYKE-KFALNKMSTVGQQISQDVLMKCWSYK  116 (157)
Q Consensus        81 L~~~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~  116 (157)
                      |+..+....+ -.+..++..++.++++ .+.|+|+-+
T Consensus       274 lynvlhe~t~vvvd~sqav~faldiar-gmaflhsle  309 (448)
T KOG0195|consen  274 LYNVLHEQTSVVVDHSQAVRFALDIAR-GMAFLHSLE  309 (448)
T ss_pred             HHHHHhcCccEEEecchHHHHHHHHHh-hHHHHhhcc
Confidence            9999987542 3677889999999999 555555543

>KOG0670|consensus

Probab=99.17  E-value=6.7e-11  Score=87.18  Aligned_cols=124  Identities=20%  Similarity=0.213  Sum_probs=101.1

Q ss_pred             ccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC------CceeeeeeEEecCCceEEEEe
Q psy697            4 RIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH------ENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~~~~~~lv~e   74 (157)
                      ..|+|-||.|..|.+..   +||||++..    +.-+-..=..|+.+|.+++.      -+.+.++..|...+++++|+|
T Consensus       439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRn----NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE  514 (752)
T KOG0670|consen  439 YTGKGVFSTVVRARDQARGQEVAIKIIRN----NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFE  514 (752)
T ss_pred             ccccceeeeeeeccccCCCCeeEEEEeec----chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEeh
Confidence            46899999999998855   599999985    34444555679999999854      267888888999999999999


Q ss_pred             cCCCCCHhHHHhhhc--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           75 KCNGHTLYTNIHIYK--EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      -+. -+|.+++++.+  ..+....+..++.|+..                      +|.-+..-+++|.|+||.|+|+.+
T Consensus       515 ~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLfl----------------------ALklLK~c~vlHaDIKPDNiLVNE  571 (752)
T KOG0670|consen  515 PLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFL----------------------ALKLLKKCGVLHADIKPDNILVNE  571 (752)
T ss_pred             hhh-chHHHHHHHhCcccceeehHHHHHHHHHHH----------------------HHHHHHhcCeeecccCccceEecc
Confidence            884 59999999865  35778888889887777                      666678889999999999999887


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       572 ~k  573 (752)
T KOG0670|consen  572 SK  573 (752)
T ss_pred             Cc
Confidence            54

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.15  E-value=2.7e-10  Score=84.53  Aligned_cols=128  Identities=10%  Similarity=0.077  Sum_probs=76.1

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCCCCH---------------------------H----HHH------HHHH
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDE---------------------------K----TWE------AFKL   43 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~---------------------------~----~~~------~~~~   43 (157)
                      +.||+|++|+||+|+.++  .||||+..+.....-                           .    ...      .+.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            468999999999999865  599999876320000                           0    000      1333


Q ss_pred             HHHHHHhc----CCCceeeeeeEEe-cCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy697           44 EVTTFRKT----RHENLVLFMGACM-KPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPS  118 (157)
Q Consensus        44 e~~~l~~l----~h~niv~~~~~~~-~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  118 (157)
                      |...+..+    ++.+-+.+...+. ....-+++|||++|++|.+.........+.   ..++..++.            
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~---~~ia~~~~~------------  267 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDR---KALAENLAR------------  267 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCH---HHHHHHHHH------------
Confidence            44444443    2322233333332 234568999999999998876543212221   223333322            


Q ss_pred             CCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697          119 DRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       119 ~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                               ..+..+|..+++|+|+++.|++....+
T Consensus       268 ---------~~l~ql~~~g~~H~D~hPgNilv~~~g  294 (437)
T TIGR01982       268 ---------SFLNQVLRDGFFHADLHPGNIFVLKDG  294 (437)
T ss_pred             ---------HHHHHHHhCCceeCCCCcccEEECCCC
Confidence                     124456788999999999999986554

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.02  E-value=7.3e-10  Score=83.66  Aligned_cols=128  Identities=9%  Similarity=0.064  Sum_probs=72.6

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCC--------------------------C-H----HHHHHH------H
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD--------------------------D-E----KTWEAF------K   42 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~--------------------------~-~----~~~~~~------~   42 (157)
                      +.+|+|++|+||+|..++   .||||++.+....                          + .    +..+.+      .
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~  204 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM  204 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence            468999999999999864   5999999764200                          0 0    111222      2


Q ss_pred             HHHHHHHhc----CCCceeeeeeEEec-CCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCC
Q psy697           43 LEVTTFRKT----RHENLVLFMGACMK-PPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKP  117 (157)
Q Consensus        43 ~e~~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  117 (157)
                      +|...+.++    .+.+.+.+...+.. +..-+++|||++|+.+.+.-.......+...   ++...+.           
T Consensus       205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~---la~~~v~-----------  270 (537)
T PRK04750        205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKL---LAERGVE-----------  270 (537)
T ss_pred             HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHH---HHHHHHH-----------
Confidence            333333333    23333333333322 4456799999999999775322111222221   1121111           


Q ss_pred             CCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697          118 SDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       118 ~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                                ..+..+.+.|++|+|++++|++....+
T Consensus       271 ----------~~~~Qif~~GffHaDpHPGNIlv~~~g  297 (537)
T PRK04750        271 ----------VFFTQVFRDGFFHADMHPGNIFVSYDP  297 (537)
T ss_pred             ----------HHHHHHHhCCeeeCCCChHHeEEecCC
Confidence                      122234458999999999999987653

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.97  E-value=2e-10  Score=91.07  Aligned_cols=76  Identities=9%  Similarity=0.017  Sum_probs=60.0

Q ss_pred             CceeeeeeEE-------ecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q psy697           54 ENLVLFMGAC-------MKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITL  126 (157)
Q Consensus        54 ~niv~~~~~~-------~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i  126 (157)
                      +||.++.+++       .....++.++||+ +++|.+++......+++..+..++.||+.                    
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~--------------------   91 (793)
T PLN00181         33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVE--------------------   91 (793)
T ss_pred             HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHH--------------------
Confidence            4666666665       2234567788877 66999999764446899999999998888                    


Q ss_pred             HHHHhccccccccccCCCCccccccc
Q psy697          127 MKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus       127 ~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                        +|+++|+++|+|||+|+.|+|...
T Consensus        92 --al~~lH~~gIvHrDlKP~NiLl~~  115 (793)
T PLN00181         92 --IVNAAHSQGIVVHNVRPSCFVMSS  115 (793)
T ss_pred             --HHHHHHhCCeeeccCCchhEEEcc
Confidence              888889999999999999999853

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.92  E-value=2.1e-08  Score=67.75  Aligned_cols=145  Identities=12%  Similarity=0.129  Sum_probs=99.6

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC--CceeeeeeEEecC---CceEEEEec
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH--ENLVLFMGACMKP---PHLAIVTSK   75 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~---~~~~lv~e~   75 (157)
                      +.++.|..+.+|+++..+  .+++|.......  ......+..|..++..+.+  .++.+++.+....   +..+++|||
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~--~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL--LPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCccc--CcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            568999999999998865  599998765321  1134467888888888855  3456666665543   356899999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCC--CC-----------------------------CHH
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSD--RP-----------------------------DFI  124 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--Rp-----------------------------~~~  124 (157)
                      +++.++.+.+..  ..+++.+...++.++++ .+..+|+.....  .+                             .+.
T Consensus        82 i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~-~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (223)
T cd05154          82 VDGRVLRDRLLR--PELSPEERRALARALAD-TLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME  158 (223)
T ss_pred             eCCEecCCCCCC--CCCCHHHHHHHHHHHHH-HHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence            999888776542  25788888889999999 999999754321  11                             111


Q ss_pred             HHHHHHhcc----ccccccccCCCCccccccc
Q psy697          125 TLMKSLEKL----PKKRILARSPSHPLNLSRS  152 (157)
Q Consensus       125 ~i~~~l~~~----~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++++.+...    ....++|+|+.+.|++...
T Consensus       159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~  190 (223)
T cd05154         159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHP  190 (223)
T ss_pred             HHHHHHHhhCCCCCCcEEEECCCCcccEEEcC
Confidence            222222211    1346899999999999876

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.89  E-value=1.2e-08  Score=66.26  Aligned_cols=118  Identities=11%  Similarity=-0.052  Sum_probs=74.9

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCce-eeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL-VLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.++.|.++.||+++..+ .+++|......    .....+..|...+..+...++ .+++....  ...+++|||+++.
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~   76 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGT----ELLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGS   76 (170)
T ss_pred             eeecCCcccCceEEEEECCeEEEEEeCCCCc----ccccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCC
Confidence            3578899999999998765 59999876532    112234667777777754443 34444432  3357999999998


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      ++...    . ...    .....++++ ++..+|+..+.                ..+++|+|+++.|++..
T Consensus        77 ~l~~~----~-~~~----~~~~~~l~~-~l~~LH~~~~~----------------~~~~~HgD~~~~Nil~~  122 (170)
T cd05151          77 ELLTE----D-FSD----PENLEKIAK-LLKKLHSSPLP----------------DLVPCHNDLLPGNFLLD  122 (170)
T ss_pred             ccccc----c-ccC----HHHHHHHHH-HHHHHhCCCCC----------------CceeecCCCCcCcEEEE
Confidence            77543    0 111    123455555 44444444321                33569999999999876

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0590|consensus

Probab=98.88  E-value=6.4e-10  Score=85.29  Aligned_cols=128  Identities=13%  Similarity=0.106  Sum_probs=91.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEec----cCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLD----VDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~----~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      ...+|.|++|.++.+....   ..+.|...    ... ........+..|..+-..++|||++.............-.||
T Consensus       323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTE-SERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             cceeeecccCceEEEEecCCCccchhhhhhcccCCcc-cHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            3568899999777776533   13333222    211 222223336677777778899998777666655544444599


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ||++ +|+.++...+ .++...+..++.|+..                      +++++|..|+.|||+|.+|.+....+
T Consensus       402 ~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~----------------------Gv~y~h~~GiahrdlK~enll~~~~g  457 (601)
T KOG0590|consen  402 YCPY-DLFSLVMSNG-KLTPLEADCFFKQLLR----------------------GVKYLHSMGLAHRDLKLENLLVTENG  457 (601)
T ss_pred             cccH-HHHHHHhccc-ccchhhhhHHHHHHHH----------------------HHHHHHhcCceeccCccccEEEecCC
Confidence            9999 9999998753 5788888888887666                      89999999999999999999887664

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.76  E-value=9.4e-08  Score=63.55  Aligned_cols=124  Identities=15%  Similarity=0.078  Sum_probs=78.6

Q ss_pred             CCccccCceeeEEEEEEe---------cceEEEEeccCCC----------CC---------H----HHHHHHHHHHHHHH
Q psy697            2 GDRIGKGHFGTVYNGNWH---------GEVAVKVLDVDYL----------DD---------E----KTWEAFKLEVTTFR   49 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~---------~~~avk~~~~~~~----------~~---------~----~~~~~~~~e~~~l~   49 (157)
                      ...||.|.=+.||.|...         ..+|+|+......          .+         .    ....+..+|...|.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            457899999999999754         2599998764320          00         0    11223348888888


Q ss_pred             hcC--CCceeeeeeEEecCCceEEEEecCCCCCHh-HHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q psy697           50 KTR--HENLVLFMGACMKPPHLAIVTSKCNGHTLY-TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITL  126 (157)
Q Consensus        50 ~l~--h~niv~~~~~~~~~~~~~lv~e~~~~g~L~-~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i  126 (157)
                      ++.  .-+++..++.    ..-+++|||+.+..+. ..++..  .++..+...+..                      ++
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~----------------------~i  133 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYY----------------------QV  133 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHH----------------------HH
Confidence            883  3455666643    4567999999765432 222221  234444444444                      44


Q ss_pred             HHHHhcc-ccccccccCCCCcccccccc
Q psy697          127 MKSLEKL-PKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       127 ~~~l~~~-~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +..+..+ |..+++|+|++..|++....
T Consensus       134 ~~~l~~l~H~~glVHGDLs~~NIL~~~~  161 (197)
T cd05146         134 LSMMKQLYKECNLVHADLSEYNMLWHDG  161 (197)
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEEECC
Confidence            4467666 78899999999999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG3087|consensus

Probab=98.76  E-value=5.6e-08  Score=63.43  Aligned_cols=130  Identities=20%  Similarity=0.140  Sum_probs=86.4

Q ss_pred             CccccCceeeEEEEEEecc-eEEEEe-ccC----CCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            3 DRIGKGHFGTVYNGNWHGE-VAVKVL-DVD----YLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~~-~avk~~-~~~----~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      ..+.+|+=+.|+++.+.+. +.+|.= ++.    .++..-..+...+|.+++.++.--.|.-..=++.+...-.+.|||.
T Consensus        13 ~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~   92 (229)
T KOG3087|consen   13 ELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFI   92 (229)
T ss_pred             eeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEec
Confidence            4677899999999999885 445532 221    1223334667788898888875444433333344555567899999


Q ss_pred             CC-CCHhHHHhhhcccCCHHHH-HHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NG-HTLYTNIHIYKEKFALNKM-STVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~-g~L~~~i~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++ .++.+++...-..-.+... ..++..+-+                      .+..+|.+.++|.|+.-+|++.++.+
T Consensus        93 ~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~----------------------~igklH~ndiiHGDLTTSNill~~~~  150 (229)
T KOG3087|consen   93 DGASTVKDFILSTMEDESEDEGLAELARRIGE----------------------LIGKLHDNDIIHGDLTTSNILLRSDG  150 (229)
T ss_pred             cchhHHHHHHHHHccCcccchhHHHHHHHHHH----------------------HHHHhhhCCeecccccccceEEecCC
Confidence            76 4788888764323233333 556665555                      77779999999999999999877654

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=3.1e-07  Score=59.98  Aligned_cols=121  Identities=19%  Similarity=0.190  Sum_probs=82.1

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEe-ccCCCCCH-----HHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVL-DVDYLDDE-----KTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~-~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ..+++|+=+.++.+.+.+ ++.+|.= ++.. -.+     -......+|..++.++.--.+....=+...++...|+|||
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~Y-R~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRY-RHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeeccCcceEEEeecCccc-CChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            467889999999998865 5555533 2222 222     2345667889999888544444333444566777899999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+|-.|.+.+...    ......++..                          .+..+|..+|+|.||...|++..+.+
T Consensus        81 I~G~~lkd~l~~~----~~~~~r~vG~--------------------------~vg~lH~~givHGDLTtsNiIl~~~~  129 (204)
T COG3642          81 IEGELLKDALEEA----RPDLLREVGR--------------------------LVGKLHKAGIVHGDLTTSNIILSGGR  129 (204)
T ss_pred             eCChhHHHHHHhc----chHHHHHHHH--------------------------HHHHHHhcCeecCCCccceEEEeCCc
Confidence            9998888777653    2333333333                          55559999999999999998887764

>KOG0603|consensus

Probab=98.72  E-value=2.8e-09  Score=79.93  Aligned_cols=127  Identities=20%  Similarity=0.139  Sum_probs=98.5

Q ss_pred             ccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecC
Q psy697            4 RIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+|+|+||.|+++....      -+++|.+.+...... .......|..++..++ ||.+++++..+.++...++++++.
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~-~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~   79 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVR-DRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL   79 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccc-cccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence            47999999999886422      288888876653222 2224455667777774 999999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+|++...+.... .+.+.....+...++-                      +++.+|..++++||+|..|++....+
T Consensus        80 rgg~lft~l~~~~-~f~~~~~~~~~aelaL----------------------ald~lh~l~iiyrd~k~enilld~~G  134 (612)
T KOG0603|consen   80 RGGDLFTRLSKEV-MFDELDVAFYLAELAL----------------------ALDHLHKLGIAYRDYKLENVLLLLEG  134 (612)
T ss_pred             ccchhhhccccCC-chHHHHHHHHHHHHHH----------------------HHhhcchhHHHHhcccccceeecccC
Confidence            9999998887755 5666666666664444                      88999999999999999999887655

>KOG1240|consensus

Probab=98.65  E-value=3.1e-09  Score=84.45  Aligned_cols=125  Identities=18%  Similarity=0.137  Sum_probs=90.2

Q ss_pred             CCccccCceeeEEEEEEecc-eEEEEeccCCCCCHHHHHHHH---HHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFK---LEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~-~avk~~~~~~~~~~~~~~~~~---~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||++-|=+|.+|.+++. +++|++-+..  +.-..+.+.   .|+. ..-.++||.+++.-+-.+....|++-+|..
T Consensus        28 ~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~--p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvk  104 (1431)
T KOG1240|consen   28 VENLGSTRFLKVARAKDREGLVVVKVFVKQD--PTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVK  104 (1431)
T ss_pred             ecccCchhhhhhhhccCCCceEEEEEEeccC--CCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHh
Confidence            46789999999999998774 8888886542  222222233   3333 455599999999877777777888888885


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      + +|++.+..+. -+..-+..=++.|+..                      ++..+|..+|+|.|+|.+|+|..|-
T Consensus       105 h-nLyDRlSTRP-FL~~iEKkWiaFQLL~----------------------al~qcH~~gVcHGDIKsENILiTSW  156 (1431)
T KOG1240|consen  105 H-NLYDRLSTRP-FLVLIEKKWIAFQLLK----------------------ALSQCHKLGVCHGDIKSENILITSW  156 (1431)
T ss_pred             h-hhhhhhccch-HHHHHHHHHHHHHHHH----------------------HHHHHHHcCccccccccceEEEeee
Confidence            5 8999887653 3444444556665554                      7777888899999999999998764

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.50  E-value=5e-06  Score=58.09  Aligned_cols=118  Identities=8%  Similarity=-0.099  Sum_probs=75.0

Q ss_pred             eEEEEEEec-ceEEEEeccCCCCCH---------HHHHHHHHHHHHHHhcCC--CceeeeeeEEec-----CCceEEEEe
Q psy697           12 TVYNGNWHG-EVAVKVLDVDYLDDE---------KTWEAFKLEVTTFRKTRH--ENLVLFMGACMK-----PPHLAIVTS   74 (157)
Q Consensus        12 ~v~~~~~~~-~~avk~~~~~~~~~~---------~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~-----~~~~~lv~e   74 (157)
                      .|...++.+ .+.+|...... ...         .....+.+|...+..+..  -..+...++...     ...-+++||
T Consensus        37 rvvr~~~~g~~~~vKr~~~~~-~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         37 RTLRFELAGKSYFLKWHRGTG-WGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             eEEEEEECCEEEEEEEecCCc-HHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            355666554 48888664322 000         001136678887776632  222333333332     235789999


Q ss_pred             cCCCC-CHhHHHhhh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           75 KCNGH-TLYTNIHIY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        75 ~~~~g-~L~~~i~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++++. +|.+++... ....+......++.+++.                      .+..+|..|++|+|++..|++.+.
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~----------------------~i~~LH~~Gi~HgDL~~~NiLl~~  173 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVAT----------------------MVRDMHAAGINHRDCYICHFLLHL  173 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCcCccCCCChhhEEEec
Confidence            99886 898888642 123455566677776666                      788899999999999999999874

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.41  E-value=2e-06  Score=60.40  Aligned_cols=137  Identities=15%  Similarity=0.140  Sum_probs=77.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC----------CceeeeeeEEe----
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH----------ENLVLFMGACM----   64 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h----------~niv~~~~~~~----   64 (157)
                      ++.||.|+++.||.+++..   ++++|+............+.+.+|......+.+          -.++-.++...    
T Consensus        17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~   96 (288)
T PF14531_consen   17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK   96 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred             ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence            4578999999999999976   499998876553333346666666544444322          11111111111    


Q ss_pred             -----cC---C-----ceEEEEecCCCCCHhHHHhhhcc-cCCHHHHHHHH-HHHHHHHHHHhhcCCCCCCCCHHHHHHH
Q psy697           65 -----KP---P-----HLAIVTSKCNGHTLYTNIHIYKE-KFALNKMSTVG-QQISQDVLMKCWSYKPSDRPDFITLMKS  129 (157)
Q Consensus        65 -----~~---~-----~~~lv~e~~~~g~L~~~i~~~~~-~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~Rp~~~~i~~~  129 (157)
                           ..   .     ..+++|+-+ .+||.+++..-.. .-........+ ..+..                  |.++.
T Consensus        97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~------------------Q~I~l  157 (288)
T PF14531_consen   97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTV------------------QMIRL  157 (288)
T ss_dssp             -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHH------------------HHHHH
T ss_pred             CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHH------------------HHHHH
Confidence                 11   1     246677766 5688888654110 11111111111 11112                  56668


Q ss_pred             HhccccccccccCCCCcccccccccCCC
Q psy697          130 LEKLPKKRILARSPSHPLNLSRSAESVF  157 (157)
Q Consensus       130 l~~~~~~~~~~rd~k~~~~~~~~~~~~~  157 (157)
                      .+.+|..+++|.|+++.|.+....+.+|
T Consensus       158 vA~Lh~~GlVHgdi~~~nfll~~~G~v~  185 (288)
T PF14531_consen  158 VANLHSYGLVHGDIKPENFLLDQDGGVF  185 (288)
T ss_dssp             HHHHHHTTEEEST-SGGGEEE-TTS-EE
T ss_pred             HHHHhhcceEecccceeeEEEcCCCCEE
Confidence            8899999999999999999998877654

>KOG4158|consensus

Probab=98.38  E-value=5.2e-07  Score=65.39  Aligned_cols=79  Identities=16%  Similarity=0.177  Sum_probs=58.8

Q ss_pred             CCCceeeeeeEEecC---------------------------CceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHH
Q psy697           52 RHENLVLFMGACMKP---------------------------PHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI  104 (157)
Q Consensus        52 ~h~niv~~~~~~~~~---------------------------~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i  104 (157)
                      +|||||++.++|.++                           ..+|++|.-+. .+|.+++-.+  ..+......+..|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~--~~s~r~~~~~laQl  350 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR--HRSYRTGRVILAQL  350 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC--CCchHHHHHHHHHH
Confidence            799999999887642                           25778887663 4787777654  35666666676665


Q ss_pred             HHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697          105 SQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus       105 ~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      .+                      +..++|..++.|||+|+.|+|..=.++
T Consensus       351 LE----------------------av~hL~~hgvAhRDlKSDNiL~ElddD  379 (598)
T KOG4158|consen  351 LE----------------------AVTHLHKHGVAHRDLKSDNILLELDDD  379 (598)
T ss_pred             HH----------------------HHHHHHHccchhhcccccceEEEecCC
Confidence            55                      778899999999999999998765443

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.26  E-value=1e-05  Score=54.47  Aligned_cols=94  Identities=11%  Similarity=0.051  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHHhcC--CCceeeeeeEEecC----CceEEEEecCCCC-CHhHHHhhhcccCCHHHHHHHHHHHHHHHHH
Q psy697           38 WEAFKLEVTTFRKTR--HENLVLFMGACMKP----PHLAIVTSKCNGH-TLYTNIHIYKEKFALNKMSTVGQQISQDVLM  110 (157)
Q Consensus        38 ~~~~~~e~~~l~~l~--h~niv~~~~~~~~~----~~~~lv~e~~~~g-~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~  110 (157)
                      .....+|...+..+.  .-..+...++....    ...+++||++++. +|.+++.... ..+......++.+++.    
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-~~~~~~~~~ll~~l~~----  129 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-QLDPSQRRELLRALAR----  129 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-ccchhhHHHHHHHHHH----
Confidence            345667777666652  22233444444332    3458999999874 8999988643 3556666677776666    


Q ss_pred             HhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697          111 KCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       111 ~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                                        .+..+|+.++.|+|+++.|+|.+..+
T Consensus       130 ------------------~i~~lH~~gi~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  130 ------------------LIAKLHDAGIYHGDLNPSNILVDPDD  155 (206)
T ss_pred             ------------------HHHHHHHCcCCCCCCCcccEEEeCCC
Confidence                              78889999999999999999998876

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0601|consensus

Probab=98.19  E-value=1.7e-06  Score=64.93  Aligned_cols=128  Identities=15%  Similarity=-0.025  Sum_probs=92.0

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +..||.|.|+.++.+..+.    .|++|.+....... .....-..|+-+...+ .|.+.+.+...+...+..++--|||
T Consensus       270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~-~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~  348 (524)
T KOG0601|consen  270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF-ASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFC  348 (524)
T ss_pred             eEEccCCccccceeeeecCCCCceEeChhhhccccch-HhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhh
Confidence            4578899999999887542    37888776544222 2223334455555555 7888888877777777778999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++++...+.-.. .+++...+.+..|++.                      .+.++|...++|+|+++.|++....
T Consensus       349 ~~~s~~l~~~~~~-~~d~~~~~~~~~q~~~----------------------~l~~i~s~~~~~~d~~psni~i~~~  402 (524)
T KOG0601|consen  349 EGGSSSLRSVTSQ-MLDEDPRLRLTAQILT----------------------ALNVIHSKLFVHLDVKPSNILISND  402 (524)
T ss_pred             cCcchhhhhHHHH-hcCcchhhhhHHHHHh----------------------ccccccchhhhcccccccceeeccc
Confidence            9988766653322 4667777777776555                      8999999999999999999988763

>PLN02876 acyl-CoA dehydrogenase

Probab=98.19  E-value=4.3e-05  Score=61.45  Aligned_cols=144  Identities=13%  Similarity=0.129  Sum_probs=90.5

Q ss_pred             CccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCce--eeeeeEEecC---CceEE
Q psy697            3 DRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENL--VLFMGACMKP---PHLAI   71 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni--v~~~~~~~~~---~~~~l   71 (157)
                      +.++.|.+..+|+.+...     .+++|..+....  ......+.+|..++..+. |+++  .+++..+...   +..|+
T Consensus        44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~--~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL--LQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc--CccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence            456788888999887643     477777654321  122446788999998884 5654  6777766553   46789


Q ss_pred             EEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCC---------------------------------
Q psy697           72 VTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPS---------------------------------  118 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------------------  118 (157)
                      ||||++|..+.+..   -..++..+...+..++++ .+..+|+-++.                                 
T Consensus       122 VME~v~G~~~~~~~---~~~~~~~~r~~l~~~l~~-~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~  197 (822)
T PLN02876        122 IMEYLEGRIFVDPK---LPGVAPERRRAIYRATAK-VLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGK  197 (822)
T ss_pred             EEEecCCcccCCcc---CCCCCHHHHHHHHHHHHH-HHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccC
Confidence            99999875443211   012455566667777777 66666664321                                 


Q ss_pred             --CCCCHHHHHHHHhc-ccc-------ccccccCCCCccccccc
Q psy697          119 --DRPDFITLMKSLEK-LPK-------KRILARSPSHPLNLSRS  152 (157)
Q Consensus       119 --~Rp~~~~i~~~l~~-~~~-------~~~~~rd~k~~~~~~~~  152 (157)
                        ..|.+.+++..|.. +..       ..++|.|.+..|+++..
T Consensus       198 ~~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~  241 (822)
T PLN02876        198 PPRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHP  241 (822)
T ss_pred             CCCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcC
Confidence              12334445555522 232       34899999999999864

>KOG0590|consensus

Probab=98.17  E-value=3e-07  Score=70.82  Aligned_cols=130  Identities=20%  Similarity=0.227  Sum_probs=95.1

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+.+|+|+|+.+-.....+    .+++|.+.... ...........|..+-..++ |+|++..++....++..++.+++.
T Consensus        25 ~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s  103 (601)
T KOG0590|consen   25 SRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYS  103 (601)
T ss_pred             cccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccccccCcc
Confidence            4568999999988887644    26777776543 22333334445666556665 999999999999999999999999


Q ss_pred             CCCCHhHHH-hhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc-cccccccCCCCccccccccc
Q psy697           77 NGHTLYTNI-HIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP-KKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~-~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .++++...+ .......+......+..|+..                      ++.++| ..++.|||+|+.|.+..+..
T Consensus       104 ~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s----------------------~l~~~H~~~~~~h~~ikP~n~~l~~s~  161 (601)
T KOG0590|consen  104 DGGSLFSKISHPDSTGTSSSSASRYLPQLNS----------------------GLSYLHPENGVTHRDIKPSNSLLDESG  161 (601)
T ss_pred             cccccccccccCCccCCCCcchhhhhhhhcc----------------------CccccCcccccccCCCCCccchhccCC
Confidence            999999988 432213555666667675555                      888899 88999999999987766544

>KOG1235|consensus

Probab=98.10  E-value=2.3e-05  Score=59.50  Aligned_cols=123  Identities=15%  Similarity=0.110  Sum_probs=72.3

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCCCCH-----------------------------HHHHH------HHHHH
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDE-----------------------------KTWEA------FKLEV   45 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~-----------------------------~~~~~------~~~e~   45 (157)
                      +.||..+.|+|++|+.++  .||||+..+.. .+.                             +....      |.+|.
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l-~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGL-EKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcCh-HHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            568889999999999977  49999887643 000                             00111      12222


Q ss_pred             HHHH----hcCCCc------eeeeeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcC
Q psy697           46 TTFR----KTRHEN------LVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSY  115 (157)
Q Consensus        46 ~~l~----~l~h~n------iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  115 (157)
                      ....    .+.|-+      +.+++-.+.  ..-.++|||++|..+.+.-.-.+..++...+..-..+.           
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~-----------  312 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEA-----------  312 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhhcC--cceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHH-----------
Confidence            2222    234444      344443322  34579999999987766643333245555333222221           


Q ss_pred             CCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697          116 KPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus       116 ~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                                   ..+-|-..|++|.||.|+|++.++
T Consensus       313 -------------~~~qIf~~GffHaDPHPGNilv~~  336 (538)
T KOG1235|consen  313 -------------YLEQIFKTGFFHADPHPGNILVRP  336 (538)
T ss_pred             -------------HHHHHHhcCCccCCCCCCcEEEec
Confidence                         233355668999999999999984

>KOG1023|consensus

Probab=98.07  E-value=6.9e-06  Score=61.46  Aligned_cols=81  Identities=20%  Similarity=0.256  Sum_probs=64.9

Q ss_pred             HhcCCCceeeeeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q psy697           49 RKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMK  128 (157)
Q Consensus        49 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~  128 (157)
                      +.+.|.|+.+++|.+...+..+.+.+||..|+|.+.+......+++.-...++++                      +++
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rd----------------------i~~   59 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRD----------------------ISK   59 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHH----------------------HHH
Confidence            4678999999999999999999999999999999999875546777766666664                      444


Q ss_pred             HHhccccccc-cccCCCCcccccc
Q psy697          129 SLEKLPKKRI-LARSPSHPLNLSR  151 (157)
Q Consensus       129 ~l~~~~~~~~-~~rd~k~~~~~~~  151 (157)
                      +|+++|...| .|..++..|-+..
T Consensus        60 Gl~ylh~s~i~~hg~l~s~nClvd   83 (484)
T KOG1023|consen   60 GLAYLHNSPIGYHGALKSSNCLVD   83 (484)
T ss_pred             HHHHHhcCcceeeeeeccccceee
Confidence            8888887765 6888877765544

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.97  E-value=0.00026  Score=48.38  Aligned_cols=140  Identities=14%  Similarity=0.105  Sum_probs=85.6

Q ss_pred             CccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCC--ceeeeeeEEecCCceEEEEecCCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE--NLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      ..+|+|..+.||+.. .+.+++|......     ......+|.+++..+..-  .+.+.+......+...++||+++|.+
T Consensus         7 ~~i~~G~t~~~y~~~-~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTHK-TGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEec-CCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            367999999999853 4467888876532     223457788888877433  34566666666677789999998863


Q ss_pred             -HhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCC---------------------CHHHHHHHHhcccc-cc
Q psy697           81 -LYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRP---------------------DFITLMKSLEKLPK-KR  137 (157)
Q Consensus        81 -L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp---------------------~~~~i~~~l~~~~~-~~  137 (157)
                       +...+.     .+......++.++++ .+..+|+..+...+                     ....+...++.+.. ..
T Consensus        81 ~~~~~~~-----~~~~~~~~l~~~la~-~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~  154 (226)
T TIGR02172        81 SFSRIIS-----DNPSRLEEIAKIFAE-MAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTST  154 (226)
T ss_pred             chhhhhc-----CCHHHHHHHHHHHHH-HHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCc
Confidence             333322     233344456666777 77777765443222                     11112222333332 24


Q ss_pred             ccccCCCCccccccccc
Q psy697          138 ILARSPSHPLNLSRSAE  154 (157)
Q Consensus       138 ~~~rd~k~~~~~~~~~~  154 (157)
                      .+|.|+.++|++....+
T Consensus       155 ~~HgD~~~~Nii~~~~~  171 (226)
T TIGR02172       155 CLHGDFQIGNLITSGKG  171 (226)
T ss_pred             eEecCCCCCcEEEcCCC
Confidence            68999999999876543

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.93  E-value=0.00011  Score=55.96  Aligned_cols=128  Identities=13%  Similarity=0.105  Sum_probs=75.3

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCC---------------------C------CHH----HHHH------HHH
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYL---------------------D------DEK----TWEA------FKL   43 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~---------------------~------~~~----~~~~------~~~   43 (157)
                      +.++.++.|+||+|+.++  .||||+..+...                     .      ...    ..+.      +..
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            467889999999999984  599999876430                     0      000    0111      122


Q ss_pred             HHHHHHh----c-CCCceeeeeeEE-ecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCC
Q psy697           44 EVTTFRK----T-RHENLVLFMGAC-MKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKP  117 (157)
Q Consensus        44 e~~~l~~----l-~h~niv~~~~~~-~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  117 (157)
                      |...+..    + +.+++ .+-..+ ..++.-.++|||++|-.+.+.........+...+...   +++    .      
T Consensus       211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~---~~~----~------  276 (517)
T COG0661         211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAEL---LVR----A------  276 (517)
T ss_pred             HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHH---HHH----H------
Confidence            3333332    2 23333 333333 2245567999999998888874332224553332222   222    1      


Q ss_pred             CCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697          118 SDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus       118 ~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                                 .++.+-..++.|.|+.++|++..+...
T Consensus       277 -----------f~~q~~~dgffHaDpHpGNi~v~~~g~  303 (517)
T COG0661         277 -----------FLRQLLRDGFFHADPHPGNILVRSDGR  303 (517)
T ss_pred             -----------HHHHHHhcCccccCCCccceEEecCCc
Confidence                       234455679999999999999988743

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.83  E-value=0.00017  Score=47.82  Aligned_cols=113  Identities=18%  Similarity=0.061  Sum_probs=63.4

Q ss_pred             EEEEEEec--ceEEEEeccCCC-----------------------CCHHHHHHHHHHHHHHHhcCCC--ceeeeeeEEec
Q psy697           13 VYNGNWHG--EVAVKVLDVDYL-----------------------DDEKTWEAFKLEVTTFRKTRHE--NLVLFMGACMK   65 (157)
Q Consensus        13 v~~~~~~~--~~avk~~~~~~~-----------------------~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~   65 (157)
                      ||.|...+  .+|+|+......                       ..........+|...|..+..-  ++++.+++.  
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~--   79 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN--   79 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE--
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe--
Confidence            77777644  488887754220                       1112345677899999999654  556665432  


Q ss_pred             CCceEEEEecCC--CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCC
Q psy697           66 PPHLAIVTSKCN--GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP  143 (157)
Q Consensus        66 ~~~~~lv~e~~~--~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~  143 (157)
                        .-.++|||++  |..+..+...   .++......+..++..                  +   ....+|..+++|.|+
T Consensus        80 --~~~ivME~I~~~G~~~~~l~~~---~~~~~~~~~~~~~il~------------------~---~~~~~~~~givHGDL  133 (188)
T PF01163_consen   80 --RNVIVMEYIGEDGVPLPRLKDV---DLSPEEPKELLEEILE------------------E---IIKMLHKAGIVHGDL  133 (188)
T ss_dssp             --TTEEEEE--EETTEEGGCHHHC---GGGGSTHHHHHHHHHH------------------H---HHHHHHCTTEEESS-
T ss_pred             --CCEEEEEecCCCccchhhHHhc---cccchhHHHHHHHHHH------------------H---HHHHHHhcCceecCC
Confidence              3469999998  5444433322   1223334445444443                  1   222356889999999


Q ss_pred             CCcccccccc
Q psy697          144 SHPLNLSRSA  153 (157)
Q Consensus       144 k~~~~~~~~~  153 (157)
                      ...|++....
T Consensus       134 s~~NIlv~~~  143 (188)
T PF01163_consen  134 SEYNILVDDG  143 (188)
T ss_dssp             STTSEEEETT
T ss_pred             ChhhEEeecc
Confidence            9999988765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.82  E-value=0.00044  Score=46.30  Aligned_cols=124  Identities=14%  Similarity=0.125  Sum_probs=82.1

Q ss_pred             CccccCceeeEEEEEEecceEEEEeccCCC-------------CCHHHHHHHHHHHHHHHhcC------CCceeeeeeEE
Q psy697            3 DRIGKGHFGTVYNGNWHGEVAVKVLDVDYL-------------DDEKTWEAFKLEVTTFRKTR------HENLVLFMGAC   63 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~~~avk~~~~~~~-------------~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~   63 (157)
                      ..||+|+.-.||..-.....++|+......             ..........+|+.....+.      +..|.+++|+.
T Consensus         7 ~~i~~G~~R~cy~HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~v   86 (199)
T PF10707_consen    7 DLIAQGGERDCYQHPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFV   86 (199)
T ss_pred             cccccCCCceEEECCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEEE
Confidence            568999998999776666789999877530             00112344455655544444      78899999999


Q ss_pred             ecCCceEEEEecCCC------CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697           64 MKPPHLAIVTSKCNG------HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus        64 ~~~~~~~lv~e~~~~------g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++-=+.+++|.+..      .+|.++++..  .++. .....+.                         ...+++.+.+
T Consensus        87 eT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~--~~~~-~~~~~L~-------------------------~f~~~l~~~~  138 (199)
T PF10707_consen   87 ETNLGLGLVVELIRDADGNISPTLEDYLKEG--GLTE-ELRQALD-------------------------EFKRYLLDHH  138 (199)
T ss_pred             ecCCceEEEEEEEECCCCCcCccHHHHHHcC--CccH-HHHHHHH-------------------------HHHHHHHHcC
Confidence            998778889987632      2677777542  3444 2222222                         1344566778


Q ss_pred             ccccCCCCccccccccc
Q psy697          138 ILARSPSHPLNLSRSAE  154 (157)
Q Consensus       138 ~~~rd~k~~~~~~~~~~  154 (157)
                      |+.+|+++.|++....+
T Consensus       139 Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen  139 IVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             CeecCCCcccEEEEecC
Confidence            99999999998876543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK09902 hypothetical protein; Provisional

Probab=97.78  E-value=0.001  Score=44.92  Aligned_cols=125  Identities=8%  Similarity=-0.032  Sum_probs=81.4

Q ss_pred             ccCceeeEEEEEEec-ceEEEEeccCC--CCC-HHHHHHHHHHHHHHHhcCC--CceeeeeeEEec----CCceEEEEec
Q psy697            6 GKGHFGTVYNGNWHG-EVAVKVLDVDY--LDD-EKTWEAFKLEVTTFRKTRH--ENLVLFMGACMK----PPHLAIVTSK   75 (157)
Q Consensus         6 g~G~~g~v~~~~~~~-~~avk~~~~~~--~~~-~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~----~~~~~lv~e~   75 (157)
                      |+|+.|.|+...+.+ .+-+|....-.  ... +.-...|.+|...+..+..  -++.+...+...    ...-+||+|-
T Consensus        27 ~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~  106 (216)
T PRK09902         27 RRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTED  106 (216)
T ss_pred             CCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEe
Confidence            458888899888755 36677664111  000 2235678899999888833  233444322111    2347899997


Q ss_pred             CCC-CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           76 CNG-HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        76 ~~~-g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +++ -+|.+++.... .+.+......+..+++.                      .+..+|+.++.|+|+-.-+++.+.
T Consensus       107 L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~----------------------~ia~LH~~Gv~Hgdly~khIll~~  163 (216)
T PRK09902        107 MAGFISIADWYAQHAVSPYSDEVRQAMLKAVAL----------------------AFKKMHSVNRQHGCCYVRHIYVKT  163 (216)
T ss_pred             CCCCccHHHHHhcCCcCCcchHHHHHHHHHHHH----------------------HHHHHHHCCCcCCCCCHhheeecC
Confidence            764 58988886532 13466666777777777                      777788889999999888888763

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.70  E-value=0.0003  Score=49.00  Aligned_cols=122  Identities=19%  Similarity=0.122  Sum_probs=79.8

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCC-------------------CCCHHHHHHHHHHHHHHHhcCCC--cee
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDY-------------------LDDEKTWEAFKLEVTTFRKTRHE--NLV   57 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~-------------------~~~~~~~~~~~~e~~~l~~l~h~--niv   57 (157)
                      +++.||-|.=|.||.|...+  ++++|.=....                   .+-...+-.+.+|...|..+...  .+.
T Consensus        95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP  174 (304)
T COG0478          95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP  174 (304)
T ss_pred             hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence            46789999999999999864  58888543211                   01112355677889999988544  555


Q ss_pred             eeeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697           58 LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus        58 ~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      +.++    .+.-.++||+.+|-.|...-      ++..+...+...|..                      -+..+.+.|
T Consensus       175 ~P~~----~nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~----------------------~~~~~~~~G  222 (304)
T COG0478         175 KPIA----WNRHAVVMEYIEGVELYRLR------LDVENPDEILDKILE----------------------EVRKAYRRG  222 (304)
T ss_pred             Cccc----cccceeeeehcccceeeccc------CcccCHHHHHHHHHH----------------------HHHHHHHcC
Confidence            5554    35567999999885553322      123333333332222                      444455779


Q ss_pred             ccccCCCCccccccccc
Q psy697          138 ILARSPSHPLNLSRSAE  154 (157)
Q Consensus       138 ~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.|+..=|++.++.+
T Consensus       223 iVHGDlSefNIlV~~dg  239 (304)
T COG0478         223 IVHGDLSEFNILVTEDG  239 (304)
T ss_pred             ccccCCchheEEEecCC
Confidence            99999999999998863

>KOG3741|consensus

Probab=97.69  E-value=0.00013  Score=54.92  Aligned_cols=104  Identities=19%  Similarity=0.104  Sum_probs=70.8

Q ss_pred             eEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec----CCceEEEEecCCC-CCHhH
Q psy697           12 TVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK----PPHLAIVTSKCNG-HTLYT   83 (157)
Q Consensus        12 ~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~~~~-g~L~~   83 (157)
                      ..|++...-   .|++|.+.......   ......-++.++++.|+|+|++.+.+.+    ...+.+|++|.+. ++|.+
T Consensus       291 Ttyk~~s~~DG~~YvLkRlhg~r~~~---~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  291 TTYKATSNVDGNAYVLKRLHGDRDQS---TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             eeEeeeeccCCceeeeeeeccccccC---cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            456666533   59999995433221   1123344677899999999999988874    3568999999985 57877


Q ss_pred             HHhhh--------------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy697           84 NIHIY--------------KEKFALNKMSTVGQQISQDVLMKCWSYKPSD  119 (157)
Q Consensus        84 ~i~~~--------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  119 (157)
                      +.-..              +-..++..+|.++.|+.. ++.+.|+.+...
T Consensus       368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLta-aL~sIHssGLAc  416 (655)
T KOG3741|consen  368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTA-ALYSIHSSGLAC  416 (655)
T ss_pred             HHccCCccccccccccccCCCCchHHHHHHHHHHHHH-HHHHHHhcCcee
Confidence            64311              124677899999999998 666666665433

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.67  E-value=0.0026  Score=43.78  Aligned_cols=137  Identities=13%  Similarity=0.072  Sum_probs=81.3

Q ss_pred             ccccCce-eeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            4 RIGKGHF-GTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         4 ~lg~G~~-g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      .|..|.. +.||+....+ ++.+|..+...      ......|+.++..+ ++-.+.+++.+....+..+++||+++|.+
T Consensus         5 ~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~   78 (244)
T cd05150           5 RVTEGQSGATVYRLDGKNPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVP   78 (244)
T ss_pred             ecCCCCCcCeEEEEcCCCCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCcc
Confidence            4556666 6788887643 57888876531      22356677777776 33445577776666667899999999877


Q ss_pred             HhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCC---------------------------------CHHHHH
Q psy697           81 LYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRP---------------------------------DFITLM  127 (157)
Q Consensus        81 L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp---------------------------------~~~~i~  127 (157)
                      +.....       ......+..++++ .+..+|+..+...|                                 ...++.
T Consensus        79 l~~~~~-------~~~~~~~~~~l~~-~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (244)
T cd05150          79 AAALWE-------ELEPERLVDALAE-ALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELY  150 (244)
T ss_pred             HhHhhc-------ccCHHHHHHHHHH-HHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHH
Confidence            754321       0111235555555 66666654332111                                 122223


Q ss_pred             HHHhcc----ccccccccCCCCccccccccc
Q psy697          128 KSLEKL----PKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       128 ~~l~~~----~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ..+...    ....++|+|+.+.|++....+
T Consensus       151 ~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~  181 (244)
T cd05150         151 AELEATRPAEEDLVVTHGDACLPNIIVDPGK  181 (244)
T ss_pred             HHHHhhCCCcCceEEECCCCCCccEEEeCCc
Confidence            333221    123479999999999987643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0601|consensus

Probab=97.60  E-value=5.4e-05  Score=57.10  Aligned_cols=132  Identities=20%  Similarity=0.149  Sum_probs=94.9

Q ss_pred             CCcccc--CceeeEEEEEE--ec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGK--GHFGTVYNGNW--HG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~--G~~g~v~~~~~--~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      ...+|.  |.+|.+|.+..  ..   .+|+|.-.... ..+.....-.+++....++ .|+|.++.+..+...+..++-+
T Consensus       119 ~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqt  197 (524)
T KOG0601|consen  119 SSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQT  197 (524)
T ss_pred             ccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCcccccCCcceeee
Confidence            356788  99999999876  33   47877644332 2122222334566666666 7899999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|. .+|..+.......++...++....+...                  +.+.++..+|.+.++|=|+++.+++..+.
T Consensus       198 E~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~------------------~~~~al~~~hs~~~~~~~~kp~~i~~~~~  258 (524)
T KOG0601|consen  198 ELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLS------------------RDVTALSHLHSNNIVHDDLKPANIFTTSD  258 (524)
T ss_pred             cccc-chhHHhhhcccccCCchhhhhHHhhhhh------------------cccccccccCCCcccccccchhheecccc
Confidence            9995 5776666654434777777777775544                  33348999999999999999999887664

>KOG1243|consensus

Probab=97.53  E-value=0.00048  Score=53.18  Aligned_cols=102  Identities=17%  Similarity=0.157  Sum_probs=68.7

Q ss_pred             ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHH
Q psy697           21 EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTV  100 (157)
Q Consensus        21 ~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~  100 (157)
                      ++.|...+...   ........+.+..++.++||||++++..+...+.+|+++|.+..  |..+++..    +...+..-
T Consensus        39 ~vsVF~~~~~~---~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~l----~~~~v~~G  109 (690)
T KOG1243|consen   39 PVSVFVYKRSN---GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKEL----GKEEVCLG  109 (690)
T ss_pred             ceEEEEEeCCC---chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHHh----HHHHHHHH
Confidence            46777766532   23345566777889999999999999999999999999998854  55556543    23333344


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCcccccccc
Q psy697          101 GQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSA  153 (157)
Q Consensus       101 ~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~  153 (157)
                      +.|                      |+++|-.+|+ .+++|..+....+++.+.
T Consensus       110 l~q----------------------Il~AL~FL~~d~~lvHgNv~~~SVfVn~~  141 (690)
T KOG1243|consen  110 LFQ----------------------ILAALSFLNDDCNLVHGNVCKDSVFVNES  141 (690)
T ss_pred             HHH----------------------HHHHHHHHhccCCeeeccEeeeeEEEcCC
Confidence            444                      4447777764 567777776555554443

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.40  E-value=0.0014  Score=42.96  Aligned_cols=76  Identities=24%  Similarity=0.238  Sum_probs=56.2

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCcee-eeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV-LFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.|++|.+|.||++.+.+ .+++|.-..+     +.+..+..|..++..+..-++. +++.+.    ..++.|||+.|.
T Consensus        27 ~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~d-----s~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~   97 (201)
T COG2112          27 EKELAKGTTSVVYLGEWRGGEVALKVRRRD-----SPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGR   97 (201)
T ss_pred             hhhhhcccccEEEEeeccCceEEEEEecCC-----cchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCc
Confidence            3578999999999999987 5888887642     3477889999998888766554 444332    234559999988


Q ss_pred             CHhHHHh
Q psy697           80 TLYTNIH   86 (157)
Q Consensus        80 ~L~~~i~   86 (157)
                      .|.++-.
T Consensus        98 ~L~~~~~  104 (201)
T COG2112          98 PLGKLEI  104 (201)
T ss_pred             chhhhhh
Confidence            8877654

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.23  E-value=0.008  Score=40.35  Aligned_cols=63  Identities=24%  Similarity=0.349  Sum_probs=43.3

Q ss_pred             CCccccCce-eeEEEEEEec-ceEEEEeccCCCCC-----------H-------HHHHHHHHHHHHHHhcC---CCce--
Q psy697            2 GDRIGKGHF-GTVYNGNWHG-EVAVKVLDVDYLDD-----------E-------KTWEAFKLEVTTFRKTR---HENL--   56 (157)
Q Consensus         2 ~~~lg~G~~-g~v~~~~~~~-~~avk~~~~~~~~~-----------~-------~~~~~~~~e~~~l~~l~---h~ni--   56 (157)
                      ++.||.|.- |.|++++..+ .+|+|+........           .       .....|..|++...+++   +.++  
T Consensus        42 lefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e~~~A  121 (207)
T PF13095_consen   42 LEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGREGLWA  121 (207)
T ss_pred             eeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccccCceE
Confidence            567999999 9999999977 59999932211000           0       22346788898888873   3344  


Q ss_pred             eeeeeEEe
Q psy697           57 VLFMGACM   64 (157)
Q Consensus        57 v~~~~~~~   64 (157)
                      ++.+||..
T Consensus       122 vkc~Gyl~  129 (207)
T PF13095_consen  122 VKCHGYLL  129 (207)
T ss_pred             EEeeEEEE
Confidence            88888773

>KOG1266|consensus

Probab=97.20  E-value=0.00042  Score=49.58  Aligned_cols=78  Identities=18%  Similarity=0.149  Sum_probs=60.8

Q ss_pred             HHHHHhcCCCceeeeeeEEecC-----CceEEEEecCCCCCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCC
Q psy697           45 VTTFRKTRHENLVLFMGACMKP-----PHLAIVTSKCNGHTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYK  116 (157)
Q Consensus        45 ~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~e~~~~g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~  116 (157)
                      ...+-.+-|.||++++.++.+.     .+..+++||++.|++.+++++.+   ..+....-.+++-||.. ++.|+|+.+
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIls-al~yLhs~~  196 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILS-ALSYLHSCD  196 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHh-hhhhhhccC
Confidence            3455667899999999888653     45789999999999999998743   34667777799999999 999999875


Q ss_pred             -CCCCCCH
Q psy697          117 -PSDRPDF  123 (157)
Q Consensus       117 -~~~Rp~~  123 (157)
                       +++.|+.
T Consensus       197 Ppiihgnl  204 (458)
T KOG1266|consen  197 PPIIHGNL  204 (458)
T ss_pred             CccccCCc
Confidence             3444443

>KOG0193|consensus

Probab=97.19  E-value=0.00056  Score=52.28  Aligned_cols=62  Identities=32%  Similarity=0.549  Sum_probs=49.5

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCcccccccccCCC
Q psy697           96 KMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSAESVF  157 (157)
Q Consensus        96 ~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~~~~~  157 (157)
                      .+..-+.+-.+.++..||..+..+||.|.+++..|+.+.. +..++|++.+|+.+.++.+..|
T Consensus       616 ~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~RS~S~P~~~~~~~~~~~  678 (678)
T KOG0193|consen  616 KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINRSASEPVLLRSSAETDF  678 (678)
T ss_pred             hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccccCcCccchhhhhhhccC
Confidence            3444444334459999999999999999999997777666 7789999999999988877654

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.18  E-value=0.037  Score=38.14  Aligned_cols=140  Identities=9%  Similarity=-0.008  Sum_probs=79.4

Q ss_pred             CceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc---CCCceeeeeeEEecCCceEEEEecCCCCCHh-
Q psy697            8 GHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT---RHENLVLFMGACMKPPHLAIVTSKCNGHTLY-   82 (157)
Q Consensus         8 G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~-   82 (157)
                      |..-..|...+.. ++-+|.-.      ....+.|..|+.-+.-+   +.-++.+.+......++.|+|+||.+-+.+. 
T Consensus        27 G~inea~~v~dg~~~~FvK~n~------~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d~  100 (286)
T COG3001          27 GDINEAWRLRDGTDPFFVKCNQ------REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLDA  100 (286)
T ss_pred             ccccceeEeecCCcceEEEecc------hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCCc
Confidence            3344445444433 57777643      34566677777666555   4456778888888889999999999875443 


Q ss_pred             -HH------Hh---hh-------------------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697           83 -TN------IH---IY-------------------KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus        83 -~~------i~---~~-------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                       ..      +.   .-                   .+.........++.|=+---+..|-.++. .=|.+..++..+.++
T Consensus       101 ~~~~~~GqqLA~LH~~~~~~~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlqlar~rg~-~f~did~~~~~v~el  179 (286)
T COG3001         101 HSAFILGQQLARLHQWGGQAQFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQLARERGL-TFGDIDAIVEKIQEL  179 (286)
T ss_pred             hhHHHHHHHHHHHHhhcCccccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHHHHHhCC-CccCHHHHHHHHHHH
Confidence             11      10   00                   00111112222222211112233334444 567777888877766


Q ss_pred             cccc-----ccccCCCCccccccccc
Q psy697          134 PKKR-----ILARSPSHPLNLSRSAE  154 (157)
Q Consensus       134 ~~~~-----~~~rd~k~~~~~~~~~~  154 (157)
                      ..+.     .+|.|+...|...-..+
T Consensus       180 L~~hqpqPsLlHGDLW~gN~a~~~~G  205 (286)
T COG3001         180 LADHQPQPSLLHGDLWSGNCAFGKDG  205 (286)
T ss_pred             HhcCCCCcceeecccccccccccCCC
Confidence            6543     69999999887665544

>KOG0606|consensus

Probab=97.09  E-value=0.00038  Score=56.36  Aligned_cols=26  Identities=23%  Similarity=0.095  Sum_probs=22.6

Q ss_pred             HHhccccccccccCCCCccccccccc
Q psy697          129 SLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       129 ~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .++|+|+-+|+|||+|++|.+.++-+
T Consensus       155 a~Eylh~ygivhrdlkpdnllIT~mG  180 (1205)
T KOG0606|consen  155 AVEYLHSYGIVHRDLKPDNLLITSMG  180 (1205)
T ss_pred             HhHhhccCCeecCCCCCCcceeeecc
Confidence            68889999999999999999887643

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.00  E-value=0.011  Score=40.27  Aligned_cols=56  Identities=11%  Similarity=0.178  Sum_probs=39.0

Q ss_pred             CceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCc
Q psy697           67 PHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP  146 (157)
Q Consensus        67 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~  146 (157)
                      ...+++|||++|-.|.+...     +++.        ++.                  .+.+.+..+|..|..|.|+.++
T Consensus       116 ~~~~ll~EYIeG~~l~d~~~-----i~e~--------~~~------------------ki~~~ikqlH~~G~~HGD~hpg  164 (229)
T PF06176_consen  116 SSYVLLMEYIEGVELNDIED-----IDED--------LAE------------------KIVEAIKQLHKHGFYHGDPHPG  164 (229)
T ss_pred             eEEEEEEEEecCeecccchh-----cCHH--------HHH------------------HHHHHHHHHHHcCCccCCCCcC
Confidence            45678999999987765432     2221        222                  3444677899999999999999


Q ss_pred             ccccccc
Q psy697          147 LNLSRSA  153 (157)
Q Consensus       147 ~~~~~~~  153 (157)
                      |.+....
T Consensus       165 NFlv~~~  171 (229)
T PF06176_consen  165 NFLVSNN  171 (229)
T ss_pred             cEEEECC
Confidence            9776543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.88  E-value=0.031  Score=37.73  Aligned_cols=100  Identities=11%  Similarity=0.104  Sum_probs=63.7

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC--CceeeeeeEEec---CCceEEEEecC
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH--ENLVLFMGACMK---PPHLAIVTSKC   76 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~---~~~~~lv~e~~   76 (157)
                      +.++.|..+.+|.....+ .+++|....     ......+..|..++..+..  ..+.+++.....   ....+++|+++
T Consensus         3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~-----~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i   77 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDDGRYVLKFYRP-----PDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI   77 (239)
T ss_dssp             EEEEESSSSEEEEEEETTSEEEEEEESS-----HHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred             ccCCCCCeeeEEEEEECCcEEEEEEeCC-----CCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence            568889999999999876 699998754     2345566777777777632  234566553322   34578999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcC
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSY  115 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  115 (157)
                      ++..+..       ..+......++.++++ .+..+|+.
T Consensus        78 ~g~~~~~-------~~~~~~~~~~~~~~~~-~l~~lh~~  108 (239)
T PF01636_consen   78 PGRPLDD-------ELSPEQRPELLRQLGR-ALAQLHQV  108 (239)
T ss_dssp             SSEEHHH-------TSTHHHHHHHHHHHHH-HHHHHHHS
T ss_pred             ccccccc-------cccccccccccccchh-hhhhcccc
Confidence            9887777       1234444445555555 44455444

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1033|consensus

Probab=96.81  E-value=0.00039  Score=52.07  Aligned_cols=62  Identities=21%  Similarity=0.209  Sum_probs=48.8

Q ss_pred             ceEEEEecCCCCCHhHHHhhhc--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCC
Q psy697           68 HLAIVTSKCNGHTLYTNIHIYK--EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSH  145 (157)
Q Consensus        68 ~~~lv~e~~~~g~L~~~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~  145 (157)
                      ++||.|++|...+|.+|+..++  ...++.....++.|++.                      +++|   ++.+|||+|+
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~----------------------~~~y---k~~ihrdlkp  384 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAP----------------------AVEY---KGLIHRDLKP  384 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhcc----------------------chhh---ccchhhhccc
Confidence            5899999999999999997543  24556666667776666                      7777   8899999999


Q ss_pred             ccccccccc
Q psy697          146 PLNLSRSAE  154 (157)
Q Consensus       146 ~~~~~~~~~  154 (157)
                      .|++....+
T Consensus       385 ~nif~~~d~  393 (516)
T KOG1033|consen  385 SNIFFSDDD  393 (516)
T ss_pred             cccccccch
Confidence            999887654

>PRK10593 hypothetical protein; Provisional

Probab=96.69  E-value=0.04  Score=39.32  Aligned_cols=76  Identities=8%  Similarity=0.012  Sum_probs=53.1

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC---CceeeeeeEEec---CCceEEEEec
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH---ENLVLFMGACMK---PPHLAIVTSK   75 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~---~~~~~lv~e~   75 (157)
                      +.||.|..+.||.....+ .+.+|..+..     .....+..|...++.+..   ..+.++++.+..   .+..+++||+
T Consensus        20 ~~i~~G~~~~vy~~~~~~~~~~~k~~~~~-----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         20 ECISEQPYAALWALYDSQGNPMPLMARSF-----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eecCCccceeEEEEEcCCCCEEEEEeccc-----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            468999999999987644 4677774321     112457778888877732   356777776643   3668999999


Q ss_pred             CCCCCHhH
Q psy697           76 CNGHTLYT   83 (157)
Q Consensus        76 ~~~g~L~~   83 (157)
                      +++.++.+
T Consensus        95 i~G~~~~~  102 (297)
T PRK10593         95 LRGVSVEA  102 (297)
T ss_pred             cCCEecCC
Confidence            99887654

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=96.59  E-value=0.005  Score=39.92  Aligned_cols=37  Identities=11%  Similarity=0.023  Sum_probs=33.2

Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCC
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYK  116 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  116 (157)
                      |+|.+++..++..+++.++..++.|++. ++.|+|+++
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~-~L~~lH~~~   37 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLR-ALRELHRQA   37 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHH-HHHHHHhcC
Confidence            6899999876657999999999999999 999999876

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.44  E-value=0.068  Score=37.10  Aligned_cols=133  Identities=11%  Similarity=-0.005  Sum_probs=71.1

Q ss_pred             ccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCce-eeeeeEEecCCceEEEEecCCCCCH
Q psy697            4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL-VLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      .+..|-...+|+....+ .+.+|......   ....-....|..++..+....+ .+++...  .  -++++||++|..+
T Consensus         3 ~~~~G~tn~~y~~~~~~~~~vlR~~~~~~---~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~   75 (256)
T TIGR02721         3 TLSGGLTNRSWRIEHPGISFVWRPQSPVC---KALGVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVI   75 (256)
T ss_pred             cCCCcCcCCeEEEEeCCccEEEeeCCccc---ccccCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCccc
Confidence            45667778899887655 58888754321   1110123567777776643322 2333322  2  3689999988665


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CHH--------------------HHHHHHhccc-----c
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRP-DFI--------------------TLMKSLEKLP-----K  135 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp-~~~--------------------~i~~~l~~~~-----~  135 (157)
                      ...-     ....    ....++++ .+..+|+......| ++.                    .+...+....     .
T Consensus        76 ~~~~-----~~~~----~~~~~la~-~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (256)
T TIGR02721        76 TLDQ-----FVAL----DLLLELAA-LLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLP  145 (256)
T ss_pred             cccc-----ccCc----hhHHHHHH-HHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCC
Confidence            3310     0111    23455555 66667765443222 222                    1122221111     1


Q ss_pred             ccccccCCCCcccccccc
Q psy697          136 KRILARSPSHPLNLSRSA  153 (157)
Q Consensus       136 ~~~~~rd~k~~~~~~~~~  153 (157)
                      ..++|.|+.+.|++....
T Consensus       146 ~~l~H~Dl~~~Nil~~~~  163 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQ  163 (256)
T ss_pred             CeeecCCCCcCcEEEeCC
Confidence            247999999999988654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.37  E-value=0.075  Score=37.81  Aligned_cols=70  Identities=11%  Similarity=0.046  Sum_probs=41.0

Q ss_pred             ccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc---CCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT---RHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .++.|....+|.....+ ++.+|.-...      ....+..|..-++.+   ..-.+++.+++....+..+++|||++.+
T Consensus        24 ~v~GG~i~~a~~~~~~~~~~FvK~~~~~------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   24 PVSGGDINEAYRLDTDGGSYFVKVNSES------GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EE--SSSSEEEEEETTS-EEEEEEEEGG------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             ecCCCChhheEEEECCCccEEEEecChh------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            46667788888877444 5889987632      223456666666665   4456678888877777779999999765

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.32  E-value=0.027  Score=39.06  Aligned_cols=122  Identities=12%  Similarity=0.083  Sum_probs=68.7

Q ss_pred             ccccCceeeEEEEEEec--ceEEEEeccCCCCCHH---------------------HHHHHHHHHHHHHhcC--CCceee
Q psy697            4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEK---------------------TWEAFKLEVTTFRKTR--HENLVL   58 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~---------------------~~~~~~~e~~~l~~l~--h~niv~   58 (157)
                      .|++|.-+.||+|....  .+|+|+.......-..                     ...+...|...|.++.  +-.+.+
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~  134 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE  134 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            56778888999998743  5999988754311000                     1123446666666652  333333


Q ss_pred             eeeEEecCCceEEEEecCCCC-CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-c
Q psy697           59 FMGACMKPPHLAIVTSKCNGH-TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-K  136 (157)
Q Consensus        59 ~~~~~~~~~~~~lv~e~~~~g-~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~  136 (157)
                      .+++.    .-.++|||+... .-.-.++..  ++.......+..++++                      .+..+.. -
T Consensus       135 Pi~~~----~nVLvMEfIg~~g~pAP~LkDv--~~e~~e~~~~~~~~v~----------------------~~~~l~~~a  186 (268)
T COG1718         135 PIAFR----NNVLVMEFIGDDGLPAPRLKDV--PLELEEAEGLYEDVVE----------------------YMRRLYKEA  186 (268)
T ss_pred             ceeec----CCeEEEEeccCCCCCCCCcccC--CcCchhHHHHHHHHHH----------------------HHHHHHHhc
Confidence            33322    246899999542 222222221  2222234444443333                      5555555 6


Q ss_pred             cccccCCCCcccccccc
Q psy697          137 RILARSPSHPLNLSRSA  153 (157)
Q Consensus       137 ~~~~rd~k~~~~~~~~~  153 (157)
                      +++|.|++.=|+|+-..
T Consensus       187 ~LVHgDLSEyNiL~~~~  203 (268)
T COG1718         187 GLVHGDLSEYNILVHDG  203 (268)
T ss_pred             CcccccchhhheEEECC
Confidence            89999999999887643

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.13  E-value=0.099  Score=35.82  Aligned_cols=99  Identities=11%  Similarity=0.071  Sum_probs=57.6

Q ss_pred             CccccCcee-eEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCC---ceeeeeeEEecC---CceEEEEec
Q psy697            3 DRIGKGHFG-TVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE---NLVLFMGACMKP---PHLAIVTSK   75 (157)
Q Consensus         3 ~~lg~G~~g-~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~---~~~~lv~e~   75 (157)
                      +.++.|+.. .||+.  ...+.+|..+..     .....+..|..++..+...   .+...+......   +..+++|++
T Consensus         3 ~~~~~gG~~n~vy~~--~~~~VlR~~~~~-----~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~   75 (235)
T cd05155           3 EPVDSGGTDNATFRL--GDDMSVRLPSAA-----GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRW   75 (235)
T ss_pred             eeccCCCcccceEEc--CCceEEEcCCcc-----chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEe
Confidence            456766665 48875  345778865431     1244678888888777421   233333332221   245889999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCC
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKP  117 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  117 (157)
                      ++|.++.+...      +.  ...+..++++ ++..+|+-.+
T Consensus        76 i~G~~l~~~~~------~~--~~~l~~~la~-~l~~LH~i~~  108 (235)
T cd05155          76 LEGETATAAAL------SD--PSEFAEDLAD-FLAALRQIDP  108 (235)
T ss_pred             ecCCCCCcccc------CC--HHHHHHHHHH-HHHHHhCCCc
Confidence            99987754311      11  2246666676 7777776544

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.08  E-value=0.11  Score=35.36  Aligned_cols=72  Identities=14%  Similarity=0.062  Sum_probs=42.8

Q ss_pred             CccccCceeeEEEEEEe----cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCc-eeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWH----GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN-LVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~----~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.|..|-...+|+....    +.+.+|+.....   . .......|..++..+...+ .++++....    -.+++||++
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~---~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~   75 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT---E-LIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIP   75 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCc---c-ceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeC
Confidence            45677778899998875    258888765421   1 1112235777777663322 334443322    147999998


Q ss_pred             CCCHh
Q psy697           78 GHTLY   82 (157)
Q Consensus        78 ~g~L~   82 (157)
                      |.++.
T Consensus        76 G~~l~   80 (235)
T cd05157          76 GRTLE   80 (235)
T ss_pred             CCcCC
Confidence            86654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=95.41  E-value=0.61  Score=33.02  Aligned_cols=74  Identities=11%  Similarity=0.037  Sum_probs=43.3

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCC--ceeeeeeE------EecCCceEEEE
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE--NLVLFMGA------CMKPPHLAIVT   73 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~------~~~~~~~~lv~   73 (157)
                      +.+..|....+|+....+ ++++|+....   +   ......|..++..+...  .+.+++..      ....+..+.++
T Consensus        20 ~~i~~G~~n~~y~v~~~~~~~vLr~~~~~---~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~   93 (296)
T cd05153          20 EGISAGIENTNYFVTTDSGRYVLTLFEKV---S---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV   93 (296)
T ss_pred             ecccCccccceEEEEeCCCcEEEEEcCCC---C---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence            345667667888876644 6888987641   1   23344566666655222  23343321      12245678999


Q ss_pred             ecCCCCCHh
Q psy697           74 SKCNGHTLY   82 (157)
Q Consensus        74 e~~~~g~L~   82 (157)
                      +|++|..+.
T Consensus        94 ~~i~G~~~~  102 (296)
T cd05153          94 EFLAGEHLT  102 (296)
T ss_pred             EeCCCCCCC
Confidence            999887653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.90  E-value=0.061  Score=35.75  Aligned_cols=63  Identities=14%  Similarity=0.233  Sum_probs=43.5

Q ss_pred             HHHHHHHhcCC-CceeeeeeEEecCCceEEEEecCCCCCHhHH---HhhhcccCCHHHHHHHHHHHHHHHHHH
Q psy697           43 LEVTTFRKTRH-ENLVLFMGACMKPPHLAIVTSKCNGHTLYTN---IHIYKEKFALNKMSTVGQQISQDVLMK  111 (157)
Q Consensus        43 ~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~---i~~~~~~~~~~~~~~~~~~i~~~~~~~  111 (157)
                      +|..++..+.+ +++++++|+|..    ++++||...+++...   +.... ..+|..+.+++.++++ ++..
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~-~~~w~~R~~iA~~lL~-~l~~   74 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFL-QSPWEQRAKIALQLLE-LLEE   74 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccccccccccc-ccCHHHHHHHHHHHHH-HHHH
Confidence            46777777855 588999998833    468899987766421   11111 3589999999998888 4443

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1236|consensus

Probab=94.51  E-value=0.17  Score=38.08  Aligned_cols=61  Identities=13%  Similarity=0.034  Sum_probs=35.6

Q ss_pred             EEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           70 AIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      .++=+|..|-++..+++..+  .++....+++.--++                  .+++|   +--.+.+|.|+.++|++
T Consensus       321 vl~E~~~~Gl~v~~~v~~~~--~pe~l~kkva~lg~~------------------AllkM---l~vDNFvHaDlHPGNVl  377 (565)
T KOG1236|consen  321 VLVETYERGLSVLRFVKWKS--QPEALVKKVAKLGVN------------------ALLKM---LIVDNFVHADLHPGNVL  377 (565)
T ss_pred             eeeeeccccccHHhhhhccc--ChHHHHHHHHHHHHH------------------HHHHH---HHhhcceecccCCCcEE
Confidence            34445666777777776532  344333333332222                  23333   34468899999999998


Q ss_pred             cccc
Q psy697          150 SRSA  153 (157)
Q Consensus       150 ~~~~  153 (157)
                      .+-.
T Consensus       378 irf~  381 (565)
T KOG1236|consen  378 IRFN  381 (565)
T ss_pred             EEec
Confidence            7754

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=94.49  E-value=0.42  Score=33.43  Aligned_cols=75  Identities=11%  Similarity=-0.020  Sum_probs=47.8

Q ss_pred             ccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC-CC
Q psy697            4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG-HT   80 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-g~   80 (157)
                      .+..|..+.|+.++...  +.++|+......    ...... ....|...+....+++++.-.  ..-.+++|.+.+ .+
T Consensus         9 ~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~----~~~E~~-g~~~L~~w~G~GaVrll~~d~--~~~AlLLErl~~g~~   81 (253)
T PF04655_consen    9 PPAHGSSSLVVPVRRADGTPAVLKLAPPHAE----AEHEAR-GEAALRWWNGRGAVRLLAADP--ERGALLLERLDPGRS   81 (253)
T ss_pred             CCCCCcceEEEEEEcCCCCeEEEEecCCccc----chhhhh-HHhHhheeCCCCceeeecccc--ccchhhhhhccCCCc
Confidence            34568888999997654  588998865321    111111 124477778888899987553  345688999944 46


Q ss_pred             HhHHH
Q psy697           81 LYTNI   85 (157)
Q Consensus        81 L~~~i   85 (157)
                      |.++.
T Consensus        82 L~~~~   86 (253)
T PF04655_consen   82 LASLP   86 (253)
T ss_pred             hhhcc
Confidence            65554

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.30  E-value=0.034  Score=34.06  Aligned_cols=42  Identities=21%  Similarity=0.301  Sum_probs=30.3

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHh
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK   50 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~   50 (157)
                      +.+++|+.|+||+|++++  ++|||+..+.      ..+.+...+.++..
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~------i~~~i~~Dl~~l~~   60 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPG------IEEQIEADLRILRR   60 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchH------HHHHHHHHHHHHHH
Confidence            468999999999999864  6999998753      34445555555443

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0576|consensus

Probab=94.20  E-value=0.019  Score=44.90  Aligned_cols=67  Identities=15%  Similarity=0.130  Sum_probs=46.2

Q ss_pred             cccCceeeEEEEEEecc--eEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCc-eeeeeeEEecCCceEEEEecCCCC
Q psy697            5 IGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN-LVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         5 lg~G~~g~v~~~~~~~~--~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .++++++++++.+...+  ...+.+...        -...-++++|.+++||| .+..++.+......++.++++.++
T Consensus       250 fvK~altknpKkRptaeklL~h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  250 FVKGALTKNPKKRPTAEKLLQHPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTG  319 (829)
T ss_pred             HHHHHhcCCCccCCChhhheeceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCC
Confidence            35567777777665332  334444332        22345678899999999 677777777788899999999876

>KOG2270|consensus

Probab=93.89  E-value=0.73  Score=34.42  Aligned_cols=122  Identities=16%  Similarity=0.125  Sum_probs=69.8

Q ss_pred             ccccCceeeEEEEEEec--ceEEEEeccCCC----------------------CCHH-HHHHHHHHHHHHHhcCCCceee
Q psy697            4 RIGKGHFGTVYNGNWHG--EVAVKVLDVDYL----------------------DDEK-TWEAFKLEVTTFRKTRHENLVL   58 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~--~~avk~~~~~~~----------------------~~~~-~~~~~~~e~~~l~~l~h~niv~   58 (157)
                      .|+.|.=+.||.+....  .+|+|+.+...+                      ++.. ..-+...|++.+.++....|..
T Consensus       151 CiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~  230 (520)
T KOG2270|consen  151 CISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPC  230 (520)
T ss_pred             ccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            45567777899887644  489997753221                      1111 2345677888888776554332


Q ss_pred             eeeEEecCCceEEEEecCCC-CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-c
Q psy697           59 FMGACMKPPHLAIVTSKCNG-HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-K  136 (157)
Q Consensus        59 ~~~~~~~~~~~~lv~e~~~~-g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~  136 (157)
                      .--....  .-.+||+|+.. |-..-.++.  ..++...+..+-.+++.                      .+..+.. .
T Consensus       231 PePIlLk--~hVLVM~FlGrdgw~aPkLKd--~~ls~~ka~~~Y~~~v~----------------------~MR~lY~~c  284 (520)
T KOG2270|consen  231 PEPILLK--NHVLVMEFLGRDGWAAPKLKD--ASLSTSKARELYQQCVR----------------------IMRRLYQKC  284 (520)
T ss_pred             CCceeee--cceEeeeeccCCCCcCccccc--ccCChHHHHHHHHHHHH----------------------HHHHHHHHh
Confidence            2211111  24689999953 222222332  25677776666665555                      3333443 4


Q ss_pred             cccccCCCCcccccc
Q psy697          137 RILARSPSHPLNLSR  151 (157)
Q Consensus       137 ~~~~rd~k~~~~~~~  151 (157)
                      +.+|.||..=|+|.-
T Consensus       285 ~LVHADLSEfN~Lyh  299 (520)
T KOG2270|consen  285 RLVHADLSEFNLLYH  299 (520)
T ss_pred             ceeccchhhhhheEE
Confidence            678999887776654

>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat

Probab=93.75  E-value=0.24  Score=37.20  Aligned_cols=56  Identities=11%  Similarity=0.087  Sum_probs=32.7

Q ss_pred             HHHhcCCCcee--eeeeEEe-cC---CceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHH
Q psy697           47 TFRKTRHENLV--LFMGACM-KP---PHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ  106 (157)
Q Consensus        47 ~l~~l~h~niv--~~~~~~~-~~---~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~  106 (157)
                      ++.+.+||++.  ++|..-. ..   ...+|+|||+++..-..+..    .++..++..++.++|.
T Consensus       122 ~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ven~~~~~~~e----~~~~eql~~iv~aLA~  183 (414)
T PF07914_consen  122 IFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVENVHSMDMYE----NLSVEQLLQIVRALAK  183 (414)
T ss_pred             HHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccCCceeecccC----CCCHHHHHHHHHHHHH
Confidence            34566777764  3332221 12   23789999998753332222    5677777777777776

In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).

>PRK05231 homoserine kinase; Provisional

Probab=93.71  E-value=1.8  Score=31.00  Aligned_cols=72  Identities=10%  Similarity=-0.011  Sum_probs=38.3

Q ss_pred             ccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-----CCCceeeee-e--EEecCCceEEEEe
Q psy697            4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-----RHENLVLFM-G--ACMKPPHLAIVTS   74 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~-~--~~~~~~~~~lv~e   74 (157)
                      .++.|....+|.....+ .+++|+...   .+...   +..+..++..+     .-|.++.-. |  .....+..+++++
T Consensus        29 ~l~~G~~n~~y~v~t~~g~~vLK~~~~---~~~~~---l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~  102 (319)
T PRK05231         29 GIAEGIENSNFFLTTTQGEYVLTLFER---LTAED---LPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT  102 (319)
T ss_pred             hhccccccceEEEEeCCCcEEEEEecc---CChHH---hHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence            45566667888887644 589998752   22222   22233333333     333333211 1  1122456789999


Q ss_pred             cCCCCCH
Q psy697           75 KCNGHTL   81 (157)
Q Consensus        75 ~~~~g~L   81 (157)
                      |++|..+
T Consensus       103 ~l~G~~~  109 (319)
T PRK05231        103 FLEGKWP  109 (319)
T ss_pred             ecCCCCC
Confidence            9988643

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=93.62  E-value=0.066  Score=37.07  Aligned_cols=24  Identities=33%  Similarity=0.960  Sum_probs=19.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHH
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSL  130 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l  130 (157)
                      .++..||+.+|..||++.++++.|
T Consensus       236 ~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  236 SLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHhcC
Confidence            699999999999999999998765

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=93.40  E-value=0.087  Score=36.72  Aligned_cols=32  Identities=28%  Similarity=0.749  Sum_probs=28.2

Q ss_pred             HHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          104 ISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       104 i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +.+ ++..|++.++..||++.+++..|+.++.+
T Consensus       248 ~~~-li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         248 LFA-VMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             HHH-HHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            444 99999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=93.40  E-value=2.6  Score=31.70  Aligned_cols=76  Identities=14%  Similarity=0.111  Sum_probs=49.0

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCC--CC--HHHHHHHHHHHHHHHhc---CCCceeeeeeEEecCCceEEE
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL--DD--EKTWEAFKLEVTTFRKT---RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~--~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~lv   72 (157)
                      +.+|.|.+..||++...+   .+.||.-.+...  ..  +........|...+..+   ....+++++.+  .....+++
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            468999999999998855   589998542210  01  12334555666666665   23456666655  34557899


Q ss_pred             EecCCCCC
Q psy697           73 TSKCNGHT   80 (157)
Q Consensus        73 ~e~~~~g~   80 (157)
                      |||+++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998754

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=93.37  E-value=0.094  Score=36.63  Aligned_cols=32  Identities=22%  Similarity=0.597  Sum_probs=27.9

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .+.. ++..|++.+|..||++.+++..++.+++
T Consensus       252 ~~~~-li~~cl~~~p~~Rps~~~i~~~l~~~~~  283 (283)
T cd05080         252 EVYI-LMKNCWETEAKFRPTFRSLIPILKEMHH  283 (283)
T ss_pred             HHHH-HHHHHhccChhhCCCHHHHHHHHHHhhC
Confidence            4444 9999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0192|consensus

Probab=93.09  E-value=0.11  Score=38.13  Aligned_cols=30  Identities=30%  Similarity=0.821  Sum_probs=27.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..||+.++..||+|.+++..|+.+...
T Consensus       277 ~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~  306 (362)
T KOG0192|consen  277 SLMERCWLVDPSRRPSFLEIVSRLESIMSH  306 (362)
T ss_pred             HHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence            588899999999999999999999887663

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=92.96  E-value=0.15  Score=35.12  Aligned_cols=31  Identities=16%  Similarity=0.524  Sum_probs=27.3

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      .+.. ++..|+..+|..||++.+++.+++.+|
T Consensus       236 ~~~~-~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         236 ELRD-LVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHH-HHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            3444 889999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=92.69  E-value=0.16  Score=35.45  Aligned_cols=26  Identities=27%  Similarity=0.782  Sum_probs=24.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEK  132 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~  132 (157)
                      .++..|++.++..||++.+++..|+.
T Consensus       257 ~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         257 ALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHhc
Confidence            49999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=92.63  E-value=0.16  Score=35.00  Aligned_cols=28  Identities=18%  Similarity=0.390  Sum_probs=25.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      +++..||..+|..||++.++++.++.++
T Consensus       239 ~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         239 ELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            4899999999999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=92.42  E-value=0.19  Score=34.66  Aligned_cols=27  Identities=33%  Similarity=1.011  Sum_probs=24.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      +++..|++.+|..||++.++.+.|+.+
T Consensus       236 ~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         236 ELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            489999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0606|consensus

Probab=92.39  E-value=0.073  Score=43.94  Aligned_cols=78  Identities=18%  Similarity=0.055  Sum_probs=55.5

Q ss_pred             CCCceeeeeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHh
Q psy697           52 RHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLE  131 (157)
Q Consensus        52 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~  131 (157)
                      .+|-++.....+......+++++|..++++...++..+ +.+..-......                      +++...+
T Consensus       862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~----------------------~~vqs~e  918 (1205)
T KOG0606|consen  862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPIL----------------------ERVQSLE  918 (1205)
T ss_pred             CCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCC-CcccccccchhH----------------------HHHhhhh
Confidence            44555655545455677899999999999999988755 444443333333                      4555889


Q ss_pred             ccccccccccCCCCccccccc
Q psy697          132 KLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus       132 ~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++|...++|||+++.+.+-+.
T Consensus       919 ~L~s~~r~h~~~~p~~~l~~~  939 (1205)
T KOG0606|consen  919 SLHSSLRKHRDLKPDSLLIAY  939 (1205)
T ss_pred             ccccchhhcccccccchhhcc
Confidence            999988999999988877543

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=92.39  E-value=0.15  Score=35.11  Aligned_cols=28  Identities=18%  Similarity=0.456  Sum_probs=25.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      .++..|+..++..||++.+++..++.+|
T Consensus       239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         239 QLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            4888999999999999999999998876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>PLN02236 choline kinase

Probab=92.35  E-value=2  Score=31.44  Aligned_cols=69  Identities=17%  Similarity=0.197  Sum_probs=37.5

Q ss_pred             cccCceeeEEEEEEe-------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCce-eeeeeEEecCCceEEEEecC
Q psy697            5 IGKGHFGTVYNGNWH-------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL-VLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         5 lg~G~~g~v~~~~~~-------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~   76 (157)
                      +..|-...+|++...       ..+.+|+.....   .... ....|..++..+...++ .++++.+. .+   .+.+|+
T Consensus        44 l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t---~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~-~g---~v~efi  115 (344)
T PLN02236         44 LKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV---ELFF-DRDDEIRTFECMSRHGQGPRLLGRFP-NG---RVEEFI  115 (344)
T ss_pred             cCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC---Ceee-chHHHHHHHHHHHHcCCCCceEEEEC-Cc---eEEEee
Confidence            334556678888642       247888775421   1111 12456777776643333 34555442 22   578898


Q ss_pred             CCCCH
Q psy697           77 NGHTL   81 (157)
Q Consensus        77 ~~g~L   81 (157)
                      ++.++
T Consensus       116 ~g~~l  120 (344)
T PLN02236        116 HARTL  120 (344)
T ss_pred             CCCCC
Confidence            76554

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=92.01  E-value=3.9  Score=30.35  Aligned_cols=75  Identities=12%  Similarity=0.080  Sum_probs=44.8

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCC----CCHHHHHHHHHHHHHHHhcC--CC-ceeeeeeEEecCCceEEE
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL----DDEKTWEAFKLEVTTFRKTR--HE-NLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~----~~~~~~~~~~~e~~~l~~l~--h~-niv~~~~~~~~~~~~~lv   72 (157)
                      +.+|.|....||++....   .+.||.-.+...    ..+.......-|...|....  .| .+++++.  .++....++
T Consensus         1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~v   78 (370)
T TIGR01767         1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTV   78 (370)
T ss_pred             CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--Eccccceeh
Confidence            357999999999998764   488886532110    11223344445666666552  23 3445543  344556699


Q ss_pred             EecCCCC
Q psy697           73 TSKCNGH   79 (157)
Q Consensus        73 ~e~~~~g   79 (157)
                      ||+++..
T Consensus        79 MEdL~~~   85 (370)
T TIGR01767        79 MEDLSHH   85 (370)
T ss_pred             HhhCccc
Confidence            9999654

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PHA02988 hypothetical protein; Provisional

Probab=91.88  E-value=0.17  Score=35.54  Aligned_cols=28  Identities=18%  Similarity=0.312  Sum_probs=25.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      .++..||+.+|..||++.+++..|+.+.
T Consensus       253 ~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        253 CIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             HHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            5999999999999999999999887643

>KOG0197|consensus

Probab=91.86  E-value=0.18  Score=38.11  Aligned_cols=30  Identities=37%  Similarity=0.777  Sum_probs=26.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .+|..||..+|..||||..+...++.+...
T Consensus       435 ~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  435 ELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             HHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            599999999999999999999988887653

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=91.36  E-value=0.27  Score=34.32  Aligned_cols=30  Identities=33%  Similarity=0.809  Sum_probs=25.9

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      ++.+ ++..|++.+|..||++.++++.|+.+
T Consensus       254 ~~~~-li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         254 EIYA-IMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHH-HHHHHccCChhhCCCHHHHHHHHHhc
Confidence            3444 99999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=91.33  E-value=0.27  Score=34.14  Aligned_cols=30  Identities=30%  Similarity=0.834  Sum_probs=26.0

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      .+.. ++..|++.+|.+||++.+++..|+.+
T Consensus       254 ~~~~-li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         254 EVYD-LMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHH-HHHHHhccChhhCCCHHHHHHHHhhc
Confidence            3444 88999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=91.11  E-value=1.6  Score=31.10  Aligned_cols=73  Identities=19%  Similarity=0.200  Sum_probs=41.5

Q ss_pred             CccccCceeeEEEEEEe---------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCce-eeeeeEEecCCceEEE
Q psy697            3 DRIGKGHFGTVYNGNWH---------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL-VLFMGACMKPPHLAIV   72 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~---------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv   72 (157)
                      +.+..|-...+|+.+..         +++++|+.....    .......+|..++..+....+ .++++.+. .   .++
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~----~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v   75 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV----ELLIDRERELVVFARLSERNLGPKLYGIFP-N---GRI   75 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC----cceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cch
Confidence            34555666788888764         358888865431    112234566666666633222 34444432 2   357


Q ss_pred             EecCCCCCHhH
Q psy697           73 TSKCNGHTLYT   83 (157)
Q Consensus        73 ~e~~~~g~L~~   83 (157)
                      +||++|.++..
T Consensus        76 ~e~i~G~~l~~   86 (302)
T cd05156          76 EEFIPSRTLTT   86 (302)
T ss_pred             hheeCCCcCCH
Confidence            89998866543

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=91.03  E-value=0.33  Score=33.37  Aligned_cols=27  Identities=33%  Similarity=0.999  Sum_probs=24.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      .++..|+..++..||++.++++.|+.+
T Consensus       235 ~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         235 KIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            488899999999999999999998753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=90.95  E-value=0.25  Score=34.20  Aligned_cols=27  Identities=26%  Similarity=0.780  Sum_probs=23.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      .++..||+.++..||++.++.+.|..+
T Consensus       239 ~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         239 QLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            488999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=90.82  E-value=0.34  Score=33.50  Aligned_cols=27  Identities=44%  Similarity=0.858  Sum_probs=24.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      .++..|+..+|.+||++.++++.|+.+
T Consensus       245 ~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         245 SLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            489999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=90.73  E-value=0.27  Score=33.76  Aligned_cols=27  Identities=30%  Similarity=0.770  Sum_probs=24.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      +++..|++.++..||++.+|+..|+..
T Consensus       229 ~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         229 DLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            599999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	157
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		1e-29
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		1e-06
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-23
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-23
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-23
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-23
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-23
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-23
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-23
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		3e-23
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		3e-23
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		8e-23
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-22
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-22
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		8e-22
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-21
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		9e-14
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-13
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		9e-07
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		9e-07
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		9e-07
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		1e-06
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		1e-06
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		1e-06
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		1e-06
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		1e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-06
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		3e-06
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		3e-06
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-06
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		3e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		3e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-06
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		3e-06
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		3e-06
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-06
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		3e-06
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-06
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		3e-06
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		3e-06
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-06
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-06
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		8e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		8e-06
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-05
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-05
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		4e-05
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		5e-05
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		5e-05
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		5e-05
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		5e-05
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		5e-05
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		8e-05
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		8e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		8e-05
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		9e-05
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		1e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-04
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		2e-04
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		2e-04
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-04
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-04
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		2e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-04
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		2e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-04
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		3e-04
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		3e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		4e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		4e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		4e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		4e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		4e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		5e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		5e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		5e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		5e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		5e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		6e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-04
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		6e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		7e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		7e-04
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		9e-04

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G+ IGKG FG VY+G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct: 37  IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 139

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 100 VGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE 154
           +G++IS D+L+ CW+++  +RP F  LM  LEKLPK+    R  SHP +  +SAE
Sbjct: 268 MGKEIS-DILLFCWAFEQEERPTFTKLMDMLEKLPKRN---RRLSHPGHFWKSAE 318

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 70
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 71  GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 14  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 72
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 73  GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 117

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 17  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 75
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 76  GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 120

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 70
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 71  GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 39  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 97
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 98  GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 142

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 32  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 90
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 91  GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 135

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 40  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 98
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 99  GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score =  104 bits (259), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 17  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 75
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 76  GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 120

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score =  104 bits (259), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 40  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 98
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 99  GYSTK-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score =  102 bits (254), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/106 (49%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 70
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G     P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 71  GYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 16  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 74
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++H  + KF + K+  + +Q ++
Sbjct: 75  GYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 119

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 86
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G   K P LAIVT  C G +LY ++H  + KF + K+  + +Q ++
Sbjct: 87  GYSTK-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 99.4 bits (246), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQL-QAFKNEVGVLRKTRHVNILLFM 86
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G     P LAIVT  C G +LY ++H  + KF + K+  + +Q ++
Sbjct: 87  GYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/106 (46%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +  RIG G FGTVY G WHG+VAVK+L V     E+ ++AF+ EV   RKTRH N++LFM
Sbjct: 40  LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ-FQAFRNEVAVLRKTRHVNILLFM 98
Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G  M   +LAIVT  C G +LY ++H+ + KF + ++  + +Q +Q
Sbjct: 99  G-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ 143

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 3   DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++IG G FGTV+   WHG +VAVK+L       E+  E F  EV   ++ RH N+VLFMG
Sbjct: 43  EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMG 101
Query: 62  ACMKPPHLAIVTSKCNGHTLYTNIH 86
           A  +PP+L+IVT   +  +LY  +H
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH 126

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 3   DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++IG G FGTV+   WHG +VAVK+L       E+  E F  EV   ++ RH N+VLFMG
Sbjct: 43  EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNE-FLREVAIMKRLRHPNIVLFMG 101
Query: 62  ACMKPPHLAIVTSKCNGHTLYTNIH 86
           A  +PP+L+IVT   +  +LY  +H
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH 126

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 5  IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDD-EKTWEAFKLEVTTFRKTRHENLVLFMGA 62
          IG G FG VY   W G EVAVK    D  +D  +T E  + E   F   +H N++   G 
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 63 CMKPPHLAIVTSKCNGHTL 81
          C+K P+L +V     G  L
Sbjct: 75 CLKEPNLCLVMEFARGGPL 93

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3   DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           +++G G FG V  G W         VAVK L  D L   +  + F  EV       H NL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           +   G  + PP + +VT      +L   +  ++  F L  +S    Q+++
Sbjct: 84  IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3   DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           +++G G FG V  G W         VAVK L  D L   +  + F  EV       H NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           +   G  + PP + +VT      +L   +  ++  F L  +S    Q+++
Sbjct: 74  IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3   DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           +++G G FG V  G W         VAVK L  D L   +  + F  EV       H NL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           +   G  + PP + +VT      +L   +  ++  F L  +S    Q+++
Sbjct: 84  IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3   DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           +++G G FG V  G W         VAVK L  D L   +  + F  EV       H NL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           +   G  + PP + +VT      +L   +  ++  F L  +S    Q+++
Sbjct: 78  IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 126

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3   DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           +++G G FG V  G W         VAVK L  D L   +  + F  EV       H NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           +   G  + PP + +VT      +L   +  ++  F L  +S    Q+++
Sbjct: 74  IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3   DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           +++G G FG V  G W         VAVK L  D L   +  + F  EV       H NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           +   G  + PP + +VT      +L   +  ++  F L  +S    Q+++
Sbjct: 74  IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 3   DRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           +++G G FG V  G W         VAVK L  D L   +  + F  EV       H NL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           +   G  + PP + +VT      +L   +  ++  F L  +S    Q+++
Sbjct: 78  IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 126

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G FG VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 15 MKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 70
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 71 QLLGVCTREPPFYIITE 87

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 73
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 74 QLLGVCTREPPFYIITE 90

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 78 QLLGVCTREPPFYIITE 94

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 279
Query: 58  LFMGACMKPPHLAIVT 73
             +G C + P   I+T
Sbjct: 280 QLLGVCTREPPFYIIT 295

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58 LFMGACMKPPHLAIVT 73
            +G C + P   I+T
Sbjct: 78 QLLGVCTREPPFYIIT 93

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58 LFMGACMKPPHLAIVT 73
            +G C + P   I+T
Sbjct: 78 QLLGVCTREPPFYIIT 93

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 74
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 75 QLLGVCTREPPFYIITE 91

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIVT 73
            +G C + P   I+T
Sbjct: 73 QLLGVCTREPPFYIIT 88

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 70
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 71 QLLGVCTREPPFYIITE 87

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 30  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 85
Query: 58  LFMGACMKPPHLAIVTS 74
             +G C + P   I+T 
Sbjct: 86  QLLGVCTREPPFYIITE 102

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 73 QLLGVCTREPPFYIITE 89

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 78 QLLGVCTREPPFYIITE 94

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIVT 73
            +G C + P   I+T
Sbjct: 73 QLLGVCTREPPFYIIT 88

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 21 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 76
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 77 QLLGVCTREPPFYIITE 93

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 74
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 75 QLLGVCTREPPFYIITE 91

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 74
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 75 QLLGVCTREPPFYIITE 91

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIVTS 74
            +G C + P   I+T 
Sbjct: 73 QLLGVCTREPPFYIITE 89

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 263 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 318
Query: 58  LFMGACMKPPHLAIVT 73
             +G C + P   I+T
Sbjct: 319 QLLGVCTREPPFYIIT 334

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 5  IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
          +G+G FG V    W   +VA+K      ++ E   +AF +E+    +  H N+V   GAC
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIK-----QIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 64 MKPPHLAIVTSKCNGHTLYTNIH 86
          + P  + +V     G +LY  +H
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLH 92

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 5  IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
          +G+G FG V    W   +VA+K      ++ E   +AF +E+    +  H N+V   GAC
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIK-----QIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 64 MKPPHLAIVTSKCNGHTLYTNIH 86
          + P  + +V     G +LY  +H
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLH 91

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 22  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 77
Query: 58  LFMGACMK-PPHLAIVTSKCNGHTL 81
             +G C + PP   I+     G+ L
Sbjct: 78  QLLGVCTREPPFYIIIEFMTYGNLL 102

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMK-PPHLAIVTSKCNGHTL 81
            +G C + PP   I+     G+ L
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLL 97

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 73
Query: 58 LFMGACMKPPHLAIV 72
            +G C + P   I+
Sbjct: 74 QLLGVCTREPPFYII 88

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72
Query: 58 LFMGACMKPPHLAIV 72
            +G C + P   I+
Sbjct: 73 QLLGVCTREPPFYII 87

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 70
Query: 58 LFMGACMKPPHLAIV 72
            +G C + P   I+
Sbjct: 71 QLLGVCTREPPFYII 85

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 36  MKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 91
Query: 58  LFMGACMKPPHLAIVT 73
             +G C   P   IVT
Sbjct: 92  QLLGVCTLEPPFYIVT 107

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 4   RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
           ++ + H G ++ G W G ++ VKVL V      K+   F  E    R   H N++  +GA
Sbjct: 17  KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKS-RDFNEECPRLRIFSHPNVLPVLGA 75
Query: 63  CMKP--PHLAIVTSKCNGHTLYTNIH 86
           C  P  PH  ++T      +LY  +H
Sbjct: 76  CQSPPAPHPTLITHWMPYGSLYNVLH 101

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 5  IGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
          +GKG +G V+ G+W GE VAVK+       DEK+W   + E+      RHEN++ F+ + 
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFR-ETELYNTVMLRHENILGFIASD 71
Query: 64 MKPPH 68
          M   H
Sbjct: 72 MTSRH 76

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 4   RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
           ++ + H G ++ G W G ++ VKVL V      K+   F  E    R   H N++  +GA
Sbjct: 17  KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKS-RDFNEECPRLRIFSHPNVLPVLGA 75
Query: 63  CMKP--PHLAIVTSKCNGHTLYTNIH 86
           C  P  PH  ++T      +LY  +H
Sbjct: 76  CQSPPAPHPTLITHWXPYGSLYNVLH 101

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 5   IGKGHFGTVYNGNWHGEVAVKVLDVDYLD-DEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
           IG G+FG         + A +++ V Y++  EK  E  K E+   R  RH N+V F    
Sbjct: 27  IGAGNFGVARL--MRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 64  MKPPHLAIVTSKCNGHTLYTNI 85
           + P HLAIV    +G  L+  I
Sbjct: 85  LTPTHLAIVMEYASGGELFERI 106

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 5  IGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
          +GKG +G V+ G+W GE VAVK+       DEK+W   + E+      RHEN++ F+ + 
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFR-ETELYNTVMLRHENILGFIASD 71
Query: 64 MKPPH 68
          M   H
Sbjct: 72 MTSRH 76

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 5   IGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
           +GKG +G V+ G+W GE VAVK+       DEK+W   + E+      RHEN++ F+ + 
Sbjct: 45  VGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFR-ETELYNTVMLRHENILGFIASD 100
Query: 64  MKPPH 68
           M   H
Sbjct: 101 MTSRH 105

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 5   IGKGHFGT---VYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           IG G+FG    + +   +  VAVK ++      EK  E  K E+   R  RH N+V F  
Sbjct: 27  IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 62  ACMKPPHLAIVTSKCNGHTLYTNI 85
             + P HLAIV    +G  L+  I
Sbjct: 83  VILTPTHLAIVMEYASGGELFERI 106

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 5   IGKGHFGT---VYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           IG G+FG    + +   +  VAVK ++      EK  E  K E+   R  RH N+V F  
Sbjct: 27  IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 62  ACMKPPHLAIVTSKCNGHTLYTNI 85
             + P HLAIV    +G  L+  I
Sbjct: 83  VILTPTHLAIVMEYASGGELFERI 106

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 5   IGKGHFGT---VYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           IG G+FG    + +   +  VAVK ++      EK  E  K E+   R  RH N+V F  
Sbjct: 26  IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIDENVKREIINHRSLRHPNIVRFKE 81
Query: 62  ACMKPPHLAIVTSKCNGHTLYTNI 85
             + P HLAIV    +G  L+  I
Sbjct: 82  VILTPTHLAIVMEYASGGELFERI 105

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 1   MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           M  +IGKG +G V+ G W GE VAVKV    +  +E +W   + E+      RHEN++ F
Sbjct: 41  MVKQIGKGRYGEVWMGKWRGEKVAVKVF---FTTEEASW-FRETEIYQTVLMRHENILGF 96
Query: 60  MGACMK 65
           + A +K
Sbjct: 97  IAADIK 102

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G+G FG V+ G W+G   VA+K L    +      EAF  E    +K RHE LV    
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 77
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
             + P + IVT   N  +L
Sbjct: 78 VVSEEP-IYIVTEYMNKGSL 96

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G+G FG V+ G W+G   VA+K L    +      EAF  E    +K RHE LV    
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 77
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
             + P + IVT   N  +L
Sbjct: 78 VVSEEP-IYIVTEYMNKGSL 96

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1   MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
           + + IGKG FG V+ G W G EVAVK+       +E++W  F+  E+      RHEN++ 
Sbjct: 46  LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 100
Query: 59  FMGA 62
           F+ A
Sbjct: 101 FIAA 104

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1  MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
          + + IGKG FG V+ G W G EVAVK+       +E++W  F+  E+      RHEN++ 
Sbjct: 7  LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 61
Query: 59 FMGA 62
          F+ A
Sbjct: 62 FIAA 65

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1  MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
          + + IGKG FG V+ G W G EVAVK+       +E++W  F+  E+      RHEN++ 
Sbjct: 8  LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 62
Query: 59 FMGA 62
          F+ A
Sbjct: 63 FIAA 66

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1  MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
          + + IGKG FG V+ G W G EVAVK+       +E++W  F+  E+      RHEN++ 
Sbjct: 33 LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 87
Query: 59 FMGA 62
          F+ A
Sbjct: 88 FIAA 91

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1  MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
          + + IGKG FG V+ G W G EVAVK+       +E++W  F+  E+      RHEN++ 
Sbjct: 13 LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 67
Query: 59 FMGA 62
          F+ A
Sbjct: 68 FIAA 71

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +      EAF  E    +K RHE LV    
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62  ACMKPPHLAIVTSKCNGHTL 81
              + P   ++     G  L
Sbjct: 81  VVSEEPIYIVIEYMSKGSLL 100

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 1  MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK-LEVTTFRKTRHENLVL 58
          + + IGKG FG V+ G W G EVAVK+       +E++W  F+  E+      RHEN++ 
Sbjct: 10 LQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSW--FREAEIYQTVMLRHENILG 64
Query: 59 FMGA 62
          F+ A
Sbjct: 65 FIAA 68

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +      EAF  E    +K RHE LV    
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62  ACMKPPHLAIVTSKCNGHTL 81
              + P   ++     G  L
Sbjct: 81  VVSEEPIYIVIEYMSKGSLL 100

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 5   IGKGHFGT---VYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           IG G+FG    + +   +  VAVK ++      EK     K E+   R  RH N+V F  
Sbjct: 27  IGSGNFGVARLMRDKQSNELVAVKYIE----RGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 62  ACMKPPHLAIVTSKCNGHTLYTNI 85
             + P HLAIV    +G  L+  I
Sbjct: 83  VILTPTHLAIVMEYASGGELFERI 106

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 5   IGKGHFGTVYNGNW----HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           IGKGHFG VY+G +       +   +  +  + + +  EAF  E    R   H N++  +
Sbjct: 29  IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 61  GACMKP---PHLAIVTSKCNGHTL 81
           G  + P   PH+ ++   C+G  L
Sbjct: 89  GIMLPPEGLPHV-LLPYMCHGDLL 111

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 5  IGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
          +GKG +G V+ G WHGE VAVK+       DE++W   + E+      RH+N++ F+ + 
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSS---RDEQSW-FRETEIYNTVLLRHDNILGFIASD 71
Query: 64 M 64
          M
Sbjct: 72 M 72

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 4  RIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           +G G FG V  G W G+  VAVK++    + +++    F  E  T  K  H  LV F G
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE----FFQEAQTMMKLSHPKLVKFYG 70
Query: 62 ACMKPPHLAIVT 73
           C K   + IVT
Sbjct: 71 VCSKEYPIYIVT 82

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 70
Query: 62 ACMKPPHLAIVTS 74
             + P + IVT 
Sbjct: 71 VVSEEP-IXIVTE 82

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKIRHEKLVQLYA 80
Query: 62  ACMKPPHLAIVTSKCNGHTL 81
              + P   +      G  L
Sbjct: 81  VVSEEPIYIVTEYMSKGSLL 100

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 73
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
             + P   +      G  L
Sbjct: 74 VVSEEPIYIVTEYMSKGSLL 93

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 69
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
             + P   +      G  L
Sbjct: 70 VVSEEPIYIVTEYMSKGSLL 89

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 71
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
             + P   +      G  L
Sbjct: 72 VVSEEPIYIVTEYMSKGSLL 91

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 5  IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
          IGKG FG V  G++ G +VAVK +  D      T +AF  E +   + RH NLV  +G  
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 64 MKPP-HLAIVT 73
          ++    L IVT
Sbjct: 84 VEEKGGLYIVT 94

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 62  ACMKPPHLAIVTSKCNGHTL 81
              + P   +      G  L
Sbjct: 81  VVSEEPIYIVTEYMSKGSLL 100

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 246
Query: 62  ACMKPPHLAIVT 73
              + P + IVT
Sbjct: 247 VVSEEP-IYIVT 257

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 80
Query: 62  ACMKPPHLAIVTSKCNGHTL 81
              + P   +      G  L
Sbjct: 81  VVSEEPIYIVTEYMSKGSLL 100

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 246
Query: 62  ACMKPPHLAIVT 73
              + P + IVT
Sbjct: 247 VVSEEP-IYIVT 257

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 5  IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
          IGKG FG V  G++ G +VAVK +  D      T +AF  E +   + RH NLV  +G  
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 64 MK 65
          ++
Sbjct: 75 VE 76

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          ++G+G FG V+ G W+G   VA+K L    +      EAF  E    +K RHE LV    
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62 ACMKPPHLAIVTS 74
             + P + IVT 
Sbjct: 81 VVSEEP-IYIVTE 92

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 5  IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
          IGKG FG V  G++ G +VAVK +  D      T +AF  E +   + RH NLV  +G  
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 64 MK 65
          ++
Sbjct: 69 VE 70

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQLYA 329
Query: 62  ACMKPPHLAIVT 73
              + P + IVT
Sbjct: 330 VVSEEP-IYIVT 340

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +      EAF  E    +K RHE LV    
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62  ACMKPPHLAIVTSKCNGHTL 81
              + P   +      G  L
Sbjct: 81  VVSEEPIYIVCEYMSKGSLL 100

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 5   IGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC 63
           IGKG FG V  G++ G +VAVK +  D      T +AF  E +   + RH NLV  +G  
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 64  MK 65
           ++
Sbjct: 256 VE 257

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV    
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----AFLQEAQVMKKLRHEKLVQLYA 247
Query: 62  ACMKPPHLAIVT 73
              + P + IVT
Sbjct: 248 VVSEEP-IYIVT 258

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +      EAF  E    +K RHE LV    
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 80
Query: 62  ACMKPPHLAIVTSKCNGHTL 81
              + P   ++     G  L
Sbjct: 81  VVSEEPIYIVMEYMSKGCLL 100

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 4  RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
          R+G G FG V+ G W+G  +VA+K L    +      E+F  E    +K +H+ LV    
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP----ESFLEEAQIMKKLKHDKLVQLYA 71
Query: 62 ACMKPPHLAIVTSKCNGHTL 81
             + P + IVT   N  +L
Sbjct: 72 VVSEEP-IYIVTEYMNKGSL 90

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 1   MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           +G++IG+G+FG V++G    +   VAVK        D K    F  E    ++  H N+V
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYSHPNIV 175
Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYT 83
             +G C +   + IV     G    T
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLT 201

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 1   MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           +G++IG+G+FG V++G    +   VAVK        D K    F  E    ++  H N+V
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA--KFLQEARILKQYSHPNIV 175
Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYT 83
             +G C +   + IV     G    T
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLT 201

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 4   RIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           ++G+G FG V+ G W+G   VA+K L    +      EAF  E    +K RHE LV    
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYA 246
Query: 62  ACMKPP 67
              + P
Sbjct: 247 VVSEEP 252

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 5   IGKGHFGT--VYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           IG G+FG   +       E VAVK ++     DE      + E+   R  RH N+V F  
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENV----QREIINHRSLRHPNIVRFKE 83
Query: 62  ACMKPPHLAIVTSKCNGHTLYTNI 85
             + P HLAI+    +G  LY  I
Sbjct: 84  VILTPTHLAIIMEYASGGELYERI 107

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	157
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-43
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-14
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-38
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-38
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-05
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-31
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-27
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-26
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-23
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-22
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-22
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-20
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-20
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-20
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-19
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-18
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-14
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-12
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-12
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	5e-12
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-04
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-12
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	9e-12
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	9e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-04
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-11
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-11
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-04
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	9e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	6e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-10
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-05
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-10
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-04
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-10
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-10
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-10
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-10
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	9e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	9e-10
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-04
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-09
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-09
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-09
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-09
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-04
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-09
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-09
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-09
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-09
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-04
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-09
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-04
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-08
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-04
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-08
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-04
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-08
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	5e-08
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	5e-08
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-08
4aoj_A	329	High affinity nerve growth factor receptor; transf	7e-08
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	7e-08
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	8e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	6e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-04
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-07
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-06
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-06
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-06
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-06
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-06
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-06
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	8e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	8e-06
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-06
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	9e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-05
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-05
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	6e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	6e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-05
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-05
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	9e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	5e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	6e-04
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	6e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-04
3ork_A	311	Serine/threonine protein kinase; structural genomi	8e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	8e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	8e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	9e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	9e-04

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  145 bits (367), Expect = 1e-43
 Identities = 56/106 (52%), Positives = 77/106 (72%), Gaps = 1/106 (0%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G+ IGKG FG VY+G WHGEVA++++D++  D+E   +AFK EV  +R+TRHEN+VLFM
Sbjct: 37  IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFM 95

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           GACM PPHLAI+TS C G TLY+ +   K    +NK   + Q+I +
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVK 141

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 67.4 bits (165), Expect = 3e-14
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE 154
           D+L+ CW+++  +RP F  LM  LEKLPK+    R  SHP +  +SAE
Sbjct: 274 DILLFCWAFEQEERPTFTKLMDMLEKLPKRN---RRLSHPGHFWKSAE 318

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  131 bits (332), Expect = 1e-38
 Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V      +  +AFK EV   RKTRH N++LFM
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFM 86

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G    P  LAIVT  C G +LY ++H  + KF + K+  + +Q ++
Sbjct: 87  GYSTAPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 7/30 (23%), Positives = 17/30 (56%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK 136
            ++ +C   K  +RP F  ++  +E+L ++
Sbjct: 260 RLMAECLKKKRDERPSFPRILAEIEELARE 289

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  112 bits (281), Expect = 7e-31
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 2/96 (2%)

Query: 1   MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           + ++IG G FGTV+   WHG +VAVK+L        +    F  EV   ++ RH N+VLF
Sbjct: 41  IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIVLF 99

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALN 95
           MGA  +PP+L+IVT   +  +LY  +H    +  L+
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLD 135

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  101 bits (255), Expect = 3e-27
 Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 4/108 (3%)

Query: 1   MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDD-EKTWEAFKLEVTTFRKTRHENLVL 58
           + + IG G FG VY   W G EVAVK    D  +D  +T E  + E   F   +H N++ 
Sbjct: 11  LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
             G C+K P+L +V     G  L   +    ++   + +     QI++
Sbjct: 71  LRGVCLKEPNLCLVMEFARGGPLNRVLS--GKRIPPDILVNWAVQIAR 116

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
           LM+ CW+  P  RP F  ++  L  +
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQLTTI 271

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 99.2 bits (248), Expect = 3e-26
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)

Query: 1   MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
              ++ + H G ++ G W G ++ VKVL V      +    F  E    R   H N++  
Sbjct: 14  FLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFSHPNVLPV 72

Query: 60  MGACMKPP--HLAIVTSKCNGHTLYTNIH 86
           +GAC  PP  H  ++T      +LY  +H
Sbjct: 73  LGACQSPPAPHPTLITHWMPYGSLYNVLH 101

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 92.8 bits (231), Expect = 1e-23
 Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE----KTWEAFKLEVTTFRKTRH 53
              +IGKG FG V+ G        VA+K L +   + E    + ++ F+ EV       H
Sbjct: 23  YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82

Query: 54  ENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
            N+V   G    PP   +V        LY  +         +    +   I+ 
Sbjct: 83  PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 90.1 bits (224), Expect = 1e-22
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 1   MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           + + +G+G FG V    W   +VA+K ++      E   +AF +E+    +  H N+V  
Sbjct: 12  VEEVVGRGAFGVVCKAKWRAKDVAIKQIE-----SESERKAFIVELRQLSRVNHPNIVKL 66

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALN 95
            GAC+ P  + +V     G +LY  +H  +      
Sbjct: 67  YGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYT 100

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 89.7 bits (223), Expect = 2e-22
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
            G+ +GKG FG             + +K L      DE+T   F  EV   R   H N++
Sbjct: 14  HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVL 70

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQIS 105
            F+G   K   L  +T    G TL   I     ++  ++  +  + I+
Sbjct: 71  KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIA 118

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 14/57 (24%), Positives = 19/57 (33%), Gaps = 8/57 (14%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL--------PKKRILARSPSHPLNLSRSAES 155
            + ++C    P  RP F+ L   LE L        P    L +         R  ES
Sbjct: 254 PITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLGPQLEQLDRGFWETYRRGES 310

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 85.2 bits (211), Expect = 1e-20
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           M  +IGKG +G V+ G W GE VAVKV       +E +W   + E+      RHEN++ F
Sbjct: 41  MVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT---EEASWF-RETEIYQTVLMRHENILGF 96

Query: 60  MGACMKP----PHLAIVTSKCNGHTLYTNIH 86
           + A +K       L ++T      +LY  + 
Sbjct: 97  IAADIKGTGSWTQLYLITDYHENGSLYDYLK 127

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 82.4 bits (204), Expect = 8e-20
 Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
          + + +GKG +G V+ G+W GE VAVK+       DEK+W   + E+      RHEN++ F
Sbjct: 12 LLECVGKGRYGEVWRGSWQGENVAVKIFS---SRDEKSW-FRETELYNTVMLRHENILGF 67

Query: 60 MGACMK----PPHLAIVTSKCNGHTLYTNIH 86
          + + M        L ++T      +LY  + 
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQ 98

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 80.5 bits (199), Expect = 6e-19
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           + +   +G FG V+      E VAVK+  +    D+++W+  + EV +    +HEN++ F
Sbjct: 28  LLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ---DKQSWQ-NEYEVYSLPGMKHENILQF 83

Query: 60  MGACMKPPH----LAIVTSKCNGHTLYTNIH 86
           +GA  +       L ++T+     +L   + 
Sbjct: 84  IGAEKRGTSVDVDLWLITAFHEKGSLSDFLK 114

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 79.9 bits (197), Expect = 9e-19
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 10/79 (12%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
          + + IG+G +G VY G+     VAVKV       + + +   K  +       H+N+  F
Sbjct: 17 LLELIGRGRYGAVYKGSLDERPVAVKVFS---FANRQNFINEK-NIYRVPLMEHDNIARF 72

Query: 60 MGACMKPP-----HLAIVT 73
          +    +          +V 
Sbjct: 73 IVGDERVTADGRMEYLLVM 91

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 79.8 bits (197), Expect = 1e-18
 Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 11/111 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           + + IGKG FG V+ G W GE VAVK+       +E++W   + E+      RHEN++ F
Sbjct: 46  LQESIGKGRFGEVWRGKWRGEEVAVKIFS---SREERSWF-REAEIYQTVMLRHENILGF 101

Query: 60  MGACMK----PPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           + A  K       L +V+      +L+  ++  +    +  M  +    + 
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTAS 150

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 67.7 bits (166), Expect = 2e-14
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 1  MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
          + +++G G FG V  G W         VAVK L  D L   +  + F  EV       H 
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81

Query: 55 NLVLFMGACMKPPHLAIVT 73
          NL+   G  + PP + +VT
Sbjct: 82 NLIRLYGVVLTPP-MKMVT 99

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           +V+++CW++KP DRP F+ L   L + 
Sbjct: 256 NVMVQCWAHKPEDRPTFVALRDFLLEA 282

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
              IG G FG V+ G W  +  VA+K +    + +E     F  E     K  H  LV 
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQ 67

Query: 59 FMGACMKPPHLAIVT 73
            G C++   + +VT
Sbjct: 68 LYGVCLEQAPICLVT 82

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW  +P DRP F  L++ L ++
Sbjct: 236 QIMNHCWRERPEDRPAFSRLLRQLAEI 262

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 61.5 bits (150), Expect = 4e-12
 Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 10/80 (12%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
              +G G FGTVY G W  E       VA+K L           +    E        +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDN 76

Query: 54 ENLVLFMGACMKPPHLAIVT 73
           ++   +G C+    + ++T
Sbjct: 77 PHVCRLLGICLTST-VQLIT 95

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 6/44 (13%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS 150
            ++ KCW      RP F  L+    K      +AR P   L + 
Sbjct: 250 MIMRKCWMIDADSRPKFRELIIEFSK------MARDPQRYLVIQ 287

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 61.5 bits (150), Expect = 4e-12
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           +G++IG+G+FG V++G        VAVK        D K    F  E    ++  H N+V
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNIV 175

Query: 58  LFMGACMKPPHLAIVT 73
             +G C +   + IV 
Sbjct: 176 RLIGVCTQKQPIYIVM 191

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 10/30 (33%), Positives = 20/30 (66%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK 136
            ++ +CW+Y+P  RP F T+ + L+ + K+
Sbjct: 346 RLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 61.1 bits (149), Expect = 5e-12
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
              +G G FG V  G W G+  VA+K++    + +++    F  E        HE LV 
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQ 83

Query: 59 FMGACMKPPHLAIVT 73
            G C K   + I+T
Sbjct: 84 LYGVCTKQRPIFIIT 98

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 7/27 (25%), Positives = 14/27 (51%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW  K  +RP F  L+ ++  +
Sbjct: 252 TIMYSCWHEKADERPTFKILLSNILDV 278

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 61.1 bits (149), Expect = 5e-12
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 9/79 (11%)

Query: 1  MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
          +   +G+G FG VY G +         VAVK    D   D K  E F  E    +   H 
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 73

Query: 55 NLVLFMGACMKPPHLAIVT 73
          ++V  +G   + P   I+ 
Sbjct: 74 HIVKLIGIIEEEPTW-IIM 91

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++ +CW Y PSDRP F  L+ SL  +
Sbjct: 245 TLMTRCWDYDPSDRPRFTELVCSLSDV 271

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 60.7 bits (148), Expect = 5e-12
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 6/75 (8%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
          +   +G G FG V  G W G+  VAVK++    + +++    F  E  T  K  H  LV 
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE----FFQEAQTMMKLSHPKLVK 67

Query: 59 FMGACMKPPHLAIVT 73
          F G C K   + IVT
Sbjct: 68 FYGVCSKEYPIYIVT 82

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW   P  RP F  L+ S+E L
Sbjct: 236 QIMYSCWHELPEKRPTFQQLLSSIEPL 262

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 60.4 bits (147), Expect = 9e-12
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 10/80 (12%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
              +G G FGTV+ G W  E       V +KV++       ++++A    +       H
Sbjct: 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDH 74

Query: 54 ENLVLFMGACMKPPHLAIVT 73
           ++V  +G C     L +VT
Sbjct: 75 AHIVRLLGLCPGSS-LQLVT 93

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 6/49 (12%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES 155
            V++KCW    + RP F  L     +      +AR P   L + R +  
Sbjct: 248 MVMVKCWMIDENIRPTFKELANEFTR------MARDPPRYLVIKRESGP 290

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 60.8 bits (148), Expect = 9e-12
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +   IGKG FG V  G++ G +VAVK +  D      T +AF  E +   + RH NLV  
Sbjct: 197 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQL 251

Query: 60  MGACMK-PPHLAIVT 73
           +G  ++    L IVT
Sbjct: 252 LGVIVEEKGGLYIVT 266

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)

Query: 109 LM-KCWSYKPSDRPDFITLMKSLEKL 133
           +M  CW    + RP F+ L + LE +
Sbjct: 418 VMKNCWHLDAATRPTFLQLREQLEHI 443

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 59.9 bits (146), Expect = 1e-11
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 1  MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
          +   IGKG FG V  G++ G +VAVK +  D      T +AF  E +   + RH NLV  
Sbjct: 25 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQL 79

Query: 60 MGACMK-PPHLAIVT 73
          +G  ++    L IVT
Sbjct: 80 LGVIVEEKGGLYIVT 94

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           +V+  CW    + RP F+ L + LE +
Sbjct: 245 EVMKNCWHLDAAMRPSFLQLREQLEHI 271

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           +  ++G+G FG V+ G W+G   VA+K L    +  E     F  E    +K RHE LV 
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQ 243

Query: 59  FMGACMKPPHLAIVT 73
                 + P + IVT
Sbjct: 244 LYAVVSEEP-IYIVT 257

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           D++ +CW  +P +RP F  L   LE  
Sbjct: 412 DLMCQCWRKEPEERPTFEYLQAFLEDY 438

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 59.7 bits (145), Expect = 2e-11
 Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 10/80 (12%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
              +G G FGTVY G W  E       VA+K L           +    E        +
Sbjct: 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDN 76

Query: 54 ENLVLFMGACMKPPHLAIVT 73
           ++   +G C+    + ++T
Sbjct: 77 PHVCRLLGICLTST-VQLIT 95

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK--KRILARSPSHPLNLSRSAESVF 157
            +++KCW      RP F  L+    K+ +  +R L       ++L    +S F
Sbjct: 250 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNF 302

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 4  RIGKGHFGTVYNGNWHGE-----VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           +G G+FGTV  G +  +     VAVK+L  +  +D    +    E    ++  +  +V 
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVR 82

Query: 59 FMGACMKPPHLAIVT 73
           +G C     + +V 
Sbjct: 83 MIGICEAESWM-LVM 96

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           D++  CW+Y   +RP F  +   L   
Sbjct: 251 DLMNLCWTYDVENRPGFAAVELRLRNY 277

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 59.9 bits (145), Expect = 2e-11
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           +  ++G+G FG V+ G W+G   VA+K L    +  E     F  E    +K RHE LV 
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA----FLQEAQVMKKLRHEKLVQ 326

Query: 59  FMGACMKPPHLAIVT 73
                 + P + IVT
Sbjct: 327 LYAVVSEEP-IYIVT 340

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 38.3 bits (89), Expect = 5e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           D++ +CW  +P +RP F  L   LE  
Sbjct: 495 DLMCQCWRKEPEERPTFEYLQAFLEDY 521

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 58.8 bits (143), Expect = 2e-11
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
          + +R+G G FG V+ G ++G   VAVK L    +      +AF  E    ++ +H+ LV 
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVR 72

Query: 59 FMGACMKPPHLAIVT 73
                + P   I+T
Sbjct: 73 LYAVVTQEPIY-IIT 86

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW  +P DRP F  L   LE  
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLEDF 267

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 59.3 bits (144), Expect = 3e-11
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 7/75 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE--VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           +  ++G G FG V+   ++    VAVK +    +  E     F  E    +  +H+ LV 
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA----FLAEANVMKTLQHDKLVK 247

Query: 59  FMGACMKPPHLAIVT 73
                 K P + I+T
Sbjct: 248 LHAVVTKEP-IYIIT 261

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           +++M+CW  +P +RP F  +   L+  
Sbjct: 416 NIMMRCWKNRPEERPTFEYIQSVLDDF 442

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 58.8 bits (143), Expect = 3e-11
 Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 4  RIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           +G G+FG+V  G +       +VA+KVL      ++   E    E     +  +  +V 
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVR 74

Query: 59 FMGACMKPPHLAIVT 73
           +G C     + +V 
Sbjct: 75 LIGVCQAEALM-LVM 88

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW YK  DRPDF+T+ + +   
Sbjct: 244 ALMSDCWIYKWEDRPDFLTVEQRMRAC 270

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 59.4 bits (144), Expect = 3e-11
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 279

Query: 58  LFMGACMKPPHLAIVT 73
             +G C + P   I+T
Sbjct: 280 QLLGVCTREPPFYIIT 295

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           +++  CW + PSDRP F  + ++ E +
Sbjct: 450 ELMRACWQWNPSDRPSFAEIHQAFETM 476

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 58.4 bits (142), Expect = 4e-11
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 7/76 (9%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE---VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 72

Query: 58 LFMGACMKPPHLAIVT 73
            +G C + P   I+T
Sbjct: 73 QLLGVCTREPPFYIIT 88

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           +++  CW + PSDRP F  + ++ E +
Sbjct: 243 ELMRACWQWNPSDRPSFAEIHQAFETM 269

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 58.5 bits (142), Expect = 4e-11
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 1  MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
            + +G+G F  ++ G              EV +KVLD  + +     E+F    +   K
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS---ESFFEAASMMSK 68

Query: 51 TRHENLVLFMGACMKPPHLAIVT 73
            H++LVL  G C+      +V 
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQ 91

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           +++  C  Y+P  RP F  +++ L  L
Sbjct: 247 NLINNCMDYEPDHRPSFRAIIRDLNSL 273

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 58.4 bits (142), Expect = 5e-11
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
          +G  IG+G FG V+ G +         VA+K       D  +  E F  E  T R+  H 
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHP 76

Query: 55 NLVLFMGACMKPPHLAIVT 73
          ++V  +G   + P   I+ 
Sbjct: 77 HIVKLIGVITENPVW-IIM 94

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++ KCW+Y PS RP F  L   L  +
Sbjct: 248 SLMTKCWAYDPSRRPRFTELKAQLSTI 274

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 57.7 bits (140), Expect = 9e-11
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 11/82 (13%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
               +G+GHFG V    +  E       VAVK L  +   +       K E+   R   H
Sbjct: 25  RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--ADLKKEIEILRNLYH 82

Query: 54  ENLVLFMGACMKPPH--LAIVT 73
           EN+V + G C +     + ++ 
Sbjct: 83  ENIVKYKGICTEDGGNGIKLIM 104

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++ KCW ++PS+R  F  L++  E L
Sbjct: 274 QLMRKCWEFQPSNRTSFQNLIEGFEAL 300

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 8/79 (10%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           +   IG G  G V  G           VA+K L   Y + ++    F  E +   +  H 
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDFLSEASIMGQFDHP 110

Query: 55  NLVLFMGACMKPPHLAIVT 73
           N++   G   +     IVT
Sbjct: 111 NIIRLEGVVTRGRLAMIVT 129

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 7/27 (25%), Positives = 14/27 (51%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            +++ CW    + RP F  ++  L+ L
Sbjct: 285 QLMLDCWHKDRAQRPRFSQIVSVLDAL 311

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 56.9 bits (137), Expect = 2e-10
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 4   RIGKGHFGTVYNGNWHGE-----VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
            +G G+FG+V  G +        VA+KVL      ++   E    E     +  +  +V 
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVR 400

Query: 59  FMGACMKPPHLAIVT 73
            +G C     + +V 
Sbjct: 401 LIGVCQAEALM-LVM 414

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 41.1 bits (96), Expect = 6e-05
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW YK  DRPDF+T+ + +   
Sbjct: 570 ALMSDCWIYKWEDRPDFLTVEQRMRAC 596

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 56.6 bits (137), Expect = 2e-10
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 12/82 (14%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
              ++GKG+FG+V    +          VAVK L     D ++    F+ E+   +    
Sbjct: 27  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR---DFQREIQILKALHS 83

Query: 54  ENLVLFMGACMKPPH--LAIVT 73
           + +V + G    P    L +V 
Sbjct: 84  DFIVKYRGVSYGPGRQSLRLVM 105

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 3/49 (6%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL---PKKRILARSPSHPLNLSRS 152
           +++  CW+  P DRP F  L   L+ L    +        +HP     S
Sbjct: 275 ELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGKHHS 323

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 56.2 bits (136), Expect = 3e-10
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 12/82 (14%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
              ++GKG+FG+V    +          VAVK L       E+    F+ E+   +  +H
Sbjct: 45  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSLQH 101

Query: 54  ENLVLFMGACMKPPH--LAIVT 73
           +N+V + G C       L ++ 
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIM 123

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 7/26 (26%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 109 LM-KCWSYKPSDRPDFITLMKSLEKL 133
           +M +CW+   + RP F  L   ++++
Sbjct: 295 IMTECWNNNVNQRPSFRDLALRVDQI 320

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 56.2 bits (136), Expect = 3e-10
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 11/82 (13%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
               +G+GHFG V    +          VAVK L  D     +    +K E+   R   H
Sbjct: 35  KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR--SGWKQEIDILRTLYH 92

Query: 54  ENLVLFMGACMKPPH--LAIVT 73
           E+++ + G C       L +V 
Sbjct: 93  EHIIKYKGCCEDAGAASLQLVM 114

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW  + S RP F  L+  L+ +
Sbjct: 282 HLMKNCWETEASFRPTFENLIPILKTV 308

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 12/82 (14%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
             ++GKG+FG+V    +          VAVK L       E+    F+ E+   +  +H
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSLQH 70

Query: 54 ENLVLFMGACMKPPH--LAIVT 73
          +N+V + G C       L ++ 
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIM 92

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 6/27 (22%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++ +CW+   + RP F  L   ++++
Sbjct: 263 MIMTECWNNNVNQRPSFRDLALRVDQI 289

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 56.0 bits (135), Expect = 4e-10
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           +G  IG+G FG V+ G +         VA+K       D  +  E F  E  T R+  H 
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHP 451

Query: 55  NLVLFMGACMKPPHLAIVT 73
           ++V  +G   + P   I+ 
Sbjct: 452 HIVKLIGVITENPVW-IIM 469

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++ KCW+Y PS RP F  L   L  +
Sbjct: 623 SLMTKCWAYDPSRRPRFTELKAQLSTI 649

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 55.4 bits (134), Expect = 6e-10
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 1   MGDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH 53
               IG G FG VY G            VA+K L   Y + ++    F  E     +  H
Sbjct: 48  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR--VDFLGEAGIMGQFSH 105

Query: 54  ENLVLFMGACMKPPHLAIVT 73
            N++   G   K   + I+T
Sbjct: 106 HNIIRLEGVISKYKPMMIIT 125

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++M+CW  + + RP F  ++  L+KL
Sbjct: 281 QLMMQCWQQERARRPKFADIVSILDKL 307

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 55.1 bits (133), Expect = 9e-10
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 1   MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           +   +G G FG V +G           VA+K L V Y + ++    F  E +   +  H 
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHP 106

Query: 55  NLVLFMGACMKPPHLAIVT 73
           N++   G   K   + IVT
Sbjct: 107 NIIRLEGVVTKSKPVMIVT 125

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            +++ CW    ++RP F  ++  L+KL
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSILDKL 307

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 54.6 bits (132), Expect = 9e-10
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
               IGKGHFG VY+G +  +       A+K L       +   EAF  E    R   H 
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV--EAFLREGLLMRGLNHP 82

Query: 55  NLVLFMGACMKP-PHLAIVT 73
           N++  +G  + P     ++ 
Sbjct: 83  NVLALIGIMLPPEGLPHVLL 102

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            V+ +CW   P+ RP F  L+  +E++
Sbjct: 259 QVMQQCWEADPAVRPTFRVLVGEVEQI 285

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
          +G  +GKG FG+V       E      VAVK+L  D +      E F  E    ++  H 
Sbjct: 27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD-IEEFLREAACMKEFDHP 85

Query: 55 NLVLFMGACMK 65
          ++   +G  ++
Sbjct: 86 HVAKLVGVSLR 96

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP--LNLSRSAES 155
           D++ +CWS  P  RP F  L   LE +     +  +   P  +N+ R+   
Sbjct: 270 DLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYINIERAHHH 320

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
           +   +G G FG VY G   G        +VAVK L     + ++    F +E     K  
Sbjct: 34  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFN 91

Query: 53  HENLVLFMGACMKPPHLAIVT 73
           H+N+V  +G  ++     I+ 
Sbjct: 92  HQNIVRCIGVSLQSLPRFILM 112

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
           +M  CW ++P DRP+F  +++ +E  
Sbjct: 277 IMTQCWQHQPEDRPNFAIILERIEYC 302

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
           +G  +G+G FG V                VAVK+L  +    E        E    ++  
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL--RDLLSEFNVLKQVN 84

Query: 53  HENLVLFMGACMKPPHLAIVT 73
           H +++   GAC +   L ++ 
Sbjct: 85  HPHVIKLYGACSQDGPLLLIV 105

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
           LM  CW  +P  RP F  + K LEK+
Sbjct: 284 LMLQCWKQEPDKRPVFADISKDLEKM 309

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE-----VAVKVLDVDYLDDEKTWEAFKLEVTTFRK-TRHE 54
             D IG+G+FG V       +      A+K +      D+     F  E+    K   H 
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHP 86

Query: 55  NLVLFMGACMKPPHLAIVT 73
           N++  +GAC    +L +  
Sbjct: 87  NIINLLGACEHRGYLYLAI 105

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
           LM+ CW  KP +RP F  ++ SL ++
Sbjct: 273 LMRQCWREKPYERPSFAQILVSLNRM 298

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           +G  +G+G FG+V  GN   E      VAVK + +D     +  E F  E    +   H 
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ-REIEEFLSEAACMKDFSHP 96

Query: 55  NLVLFMGACMK 65
           N++  +G C++
Sbjct: 97  NVIRLLGVCIE 107

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           +++  CW   P DRP F  L   LEKL
Sbjct: 280 EIMYSCWRTDPLDRPTFSVLRLQLEKL 306

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
           M   +G+G FG VY G   G         VA+K ++      E+    F  E +  ++  
Sbjct: 29  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER--IEFLNEASVMKEFN 86

Query: 53  HENLVLFMGACMKPPHLAIVT 73
             ++V  +G   +     ++ 
Sbjct: 87  CHHVVRLLGVVSQGQPTLVIM 107

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 109 LM-KCWSYKPSDRPDFITLMKSLEKL 133
           LM  CW Y P  RP F+ ++ S+++ 
Sbjct: 272 LMRMCWQYNPKMRPSFLEIISSIKEE 297

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 10/80 (12%)

Query: 1   MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
             + IG+GHFG VY+G            AVK L+      E     F  E    +   H 
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV--SQFLTEGIIMKDFSHP 86

Query: 55  NLVLFMGACMK--PPHLAIV 72
           N++  +G C++     L ++
Sbjct: 87  NVLSLLGICLRSEGSPLVVL 106

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 1/26 (3%)

Query: 109 LM-KCWSYKPSDRPDFITLMKSLEKL 133
           +M KCW  K   RP F  L+  +  +
Sbjct: 264 VMLKCWHPKAEMRPSFSELVSRISAI 289

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 1  MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
            + +G+  FG VY G+  G         VA+K L        +  E F+ E     + +
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR--EEFRHEAMLRARLQ 70

Query: 53 HENLVLFMGACMKPPHLAIVT 73
          H N+V  +G   K   L+++ 
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIF 91

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 10/80 (12%)

Query: 1   MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
             + IG+GHFG VY+G            AVK L+     D      F  E    +   H 
Sbjct: 93  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHP 150

Query: 55  NLVLFMGACMK--PPHLAIV 72
           N++  +G C++     L ++
Sbjct: 151 NVLSLLGICLRSEGSPLVVL 170

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           +V++KCW  K   RP F  L+  +  +
Sbjct: 327 EVMLKCWHPKAEMRPSFSELVSRISAI 353

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 3   DRIGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
             IG G FG VY      + E VA+K +        + W+    EV   +K RH N + +
Sbjct: 60  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119

Query: 60  MGACMKPPHLAIVTSKCNG 78
            G  ++     +V   C G
Sbjct: 120 RGCYLREHTAWLVMEYCLG 138

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 53.5 bits (129), Expect = 3e-09
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 3   DRIGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           ++IGKG FG V+ G  N   + VA+K++D++  +DE   E  + E+T   +     +  +
Sbjct: 28  EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE--IEDIQQEITVLSQCDSPYVTKY 85

Query: 60  MGACMKPPHLAIVTSKCNG 78
            G+ +K   L I+     G
Sbjct: 86  YGSYLKDTKLWIIMEYLGG 104

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 52.8 bits (127), Expect = 5e-09
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
           +   +G G FG VY G   G        +VAVK L     + ++    F +E     K  
Sbjct: 75  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE--LDFLMEALIISKFN 132

Query: 53  HENLVLFMGACMKPPHLAIVT 73
           H+N+V  +G  ++     I+ 
Sbjct: 133 HQNIVRCIGVSLQSLPRFILL 153

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
           +M  CW ++P DRP+F  +++ +E  
Sbjct: 318 IMTQCWQHQPEDRPNFAIILERIEYC 343

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 52.7 bits (127), Expect = 5e-09
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 11/81 (13%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
               IG+G FG V+     G         VAVK+L  +   D +    F+ E     +  
Sbjct: 51  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ--ADFQREAALMAEFD 108

Query: 53  HENLVLFMGACMK-PPHLAIV 72
           + N+V  +G C    P   + 
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLF 129

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 1/29 (3%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKLPKK 136
           LM+ CWS  P+DRP F ++ + L+++ ++
Sbjct: 308 LMRLCWSKLPADRPSFCSIHRILQRMCER 336

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 51.6 bits (124), Expect = 9e-09
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 9/111 (8%)

Query: 1   MGDRIGKGHFGTVYNG--NWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
               IG+G F TVY G       EVA   L    L   +  + FK E    +  +H N+V
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER-QRFKEEAEMLKGLQHPNIV 88

Query: 58  LFMGACM----KPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
            F  +          + +VT      TL T +  +K    +  + +  +QI
Sbjct: 89  RFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQI 138

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 11/82 (13%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-T 51
            G  +G G FG V     +G         VAVK+L       E+  EA   E+       
Sbjct: 27  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER--EALMSELKVLSYLG 84

Query: 52  RHENLVLFMGACMKPPHLAIVT 73
            H N+V  +GAC       ++T
Sbjct: 85  NHMNIVNLLGACTIGGPTLVIT 106

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
           D++  CW   P  RP F  +++ +EK 
Sbjct: 279 DIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 51.1 bits (122), Expect = 2e-08
 Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 12/117 (10%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-T 51
           +G  +G+G FG V   +  G         VAVK+L       E    A   E+       
Sbjct: 26  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIG 83

Query: 52  RHENLVLFMGACMKPPH-LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQD 107
            H N+V  +GAC KP   L ++   C    L T +   + +F   K      +  +D
Sbjct: 84  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKD 140

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 50.4 bits (121), Expect = 3e-08
 Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 22/143 (15%)

Query: 2   GDRIGKGHFGTVYNG-NWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
             +IG+G F  VY          VA+K + +  L D K       E+   ++  H N++ 
Sbjct: 37  EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPS 118
           +  + ++   L IV    +   L   I  +K++          + I +  +   W Y   
Sbjct: 97  YYASFIEDNELNIVLELADAGDLSRMIKHFKKQ---------KRLIPERTV---WKY--- 141

Query: 119 DRPDFITLMKSLEKLPKKRILAR 141
               F+ L  +LE +  +R++ R
Sbjct: 142 ----FVQLCSALEHMHSRRVMHR 160

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 50.4 bits (121), Expect = 3e-08
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 13/84 (15%)

Query: 1   MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
           +G  +G+G FG V      G           VAVK+L  D  + +        E+   + 
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--SDLVSEMEMMKM 96

Query: 51  -TRHENLVLFMGACMKPPHLAIVT 73
             +H+N++  +GAC +   L ++ 
Sbjct: 97  IGKHKNIINLLGACTQDGPLYVIV 120

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP-LNLSRSAE 154
           +M+ CW   PS RP F  L++ L+     RIL  + +   L+LS+  E
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLD-----RILTLTTNEEYLDLSQPLE 333

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 50.3 bits (121), Expect = 3e-08
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 13/83 (15%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-T 51
           +G  +G+G FG V   +  G         VAVK+L       E    A   E+       
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIG 88

Query: 52  RHENLVLFMGACMK--PPHLAIV 72
            H N+V  +GAC K   P + IV
Sbjct: 89  HHLNVVNLLGACTKPGGPLMVIV 111

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
             ++ CW  +PS RP F  L++ L  L
Sbjct: 282 QTMLDCWHGEPSQRPTFSELVEHLGNL 308

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 13/84 (15%)

Query: 1   MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
           +G  +G+G FG V      G           VAVK+L  D  + +        E+   + 
Sbjct: 85  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL--SDLVSEMEMMKM 142

Query: 51  -TRHENLVLFMGACMKPPHLAIVT 73
             +H+N++  +GAC +   L ++ 
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIV 166

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW   PS RP F  L++ L+++
Sbjct: 336 MMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-T 51
            G  +G G FG V N   +G        +VAVK+L       E+  EA   E+    +  
Sbjct: 49  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER--EALMSELKMMTQLG 106

Query: 52  RHENLVLFMGACMKPPHLAIVT 73
            HEN+V  +GAC     + ++ 
Sbjct: 107 SHENIVNLLGACTLSGPIYLIF 128

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 7/27 (25%), Positives = 11/27 (40%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW++    RP F  L   L   
Sbjct: 306 IIMQSCWAFDSRKRPSFPNLTSFLGCQ 332

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 49.6 bits (119), Expect = 5e-08
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 5/79 (6%)

Query: 3  DRIGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
          + IG G    V         E VA+K ++++        +    E+    +  H N+V +
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSM--DELLKEIQAMSQCHHPNIVSY 78

Query: 60 MGACMKPPHLAIVTSKCNG 78
            + +    L +V    +G
Sbjct: 79 YTSFVVKDELWLVMKLLSG 97

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 49.6 bits (119), Expect = 5e-08
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 3   DRIGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
             +G G FG VY       G   A KV++    ++    E + +E+       H  +V  
Sbjct: 25  GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---LEDYIVEIEILATCDHPYIVKL 81

Query: 60  MGACMKPPHLAIVTSKCNG 78
           +GA      L I+   C G
Sbjct: 82  LGAYYHDGKLWIMIEFCPG 100

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 49.7 bits (119), Expect = 5e-08
 Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 13/84 (15%)

Query: 1   MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
           +G  +G+G FG V      G          +VAVK+L  D  + +        E+   + 
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKM 130

Query: 51  -TRHENLVLFMGACMKPPHLAIVT 73
             +H+N++  +GAC +   L ++ 
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIV 154

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
           +M+ CW   PS RP F  L++ L+++
Sbjct: 325 MMRDCWHAVPSQRPTFKQLVEDLDRI 350

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 49.6 bits (119), Expect = 6e-08
 Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 9/94 (9%)

Query: 2   GDRIGKGHFGTVYNG-NWH-GE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
              +GKG +G VY G +      +A+K +      D +  +    E+   +  +H+N+V 
Sbjct: 27  RVVLGKGTYGIVYAGRDLSNQVRIAIKEIP---ERDSRYSQPLHEEIALHKHLKHKNIVQ 83

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKF 92
           ++G+  +   + I   +  G +L     + + K+
Sbjct: 84  YLGSFSENGFIKIFMEQVPGGSLSA---LLRSKW 114

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 49.2 bits (118), Expect = 7e-08
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 11/81 (13%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
           +   +G+G FG V+    H          VAVK L       E   + F+ E       +
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQ 101

Query: 53  HENLVLFMGACMKPPHLAIVT 73
           H+++V F G C +   L +V 
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVF 122

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKLPKK 136
           +M+ CW  +P  R     +   L+ L + 
Sbjct: 292 IMRGCWQREPQQRHSIKDVHARLQALAQA 320

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 49.7 bits (119), Expect = 7e-08
 Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 10/110 (9%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
               +GKG FG V        G    E AVKV+    +  +   E+   EV   ++  H 
Sbjct: 30  GQRVLGKGSFGEVILCKDKITGQ---ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           N++          +  +V     G  L+  I I +++F+    + + +Q+
Sbjct: 87  NIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-ISRKRFSEVDAARIIRQV 135

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 49.0 bits (117), Expect = 8e-08
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 11/74 (14%)

Query: 2   GDRIGKGHFGTVYNG-NWH-GE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
             R+G+G FG V+   +   G   AVK + ++    E        E+          +V 
Sbjct: 63  QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGLSSPRIVP 114

Query: 59  FMGACMKPPHLAIV 72
             GA  + P + I 
Sbjct: 115 LYGAVREGPWVNIF 128

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-T 51
            G  +G G FG V      G        +VAVK+L      DEK  EA   E+       
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK--EALMSELKIMSHLG 107

Query: 52  RHENLVLFMGACMKPPHLAIVT 73
           +HEN+V  +GAC     + ++T
Sbjct: 108 QHENIVNLLGACTHGGPVLVIT 129

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 7/27 (25%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++  CW+ +P+ RP F  +   L++ 
Sbjct: 298 SIMQACWALEPTHRPTFQQICSFLQEQ 324

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 11/81 (13%)

Query: 1  MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
          +   +G+G FG V+    +          VAVK L    L   K    F+ E       +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK---DFQREAELLTNLQ 75

Query: 53 HENLVLFMGACMKPPHLAIVT 73
          HE++V F G C     L +V 
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVF 96

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 8/26 (30%), Positives = 12/26 (46%), Gaps = 1/26 (3%)

Query: 109 LMK-CWSYKPSDRPDFITLMKSLEKL 133
           +M  CW  +P  R +   + K L  L
Sbjct: 267 VMLGCWQREPQQRLNIKEIYKILHAL 292

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 10/73 (13%)

Query: 5   IGKGHFGTVYNGN-WHG-EVAVKVLDVDYL---DDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G+G FG VY G    G  VAVK L  +     + +     F+ EV       H NL+  
Sbjct: 38  LGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQ-----FQTEVEMISMAVHRNLLRL 92

Query: 60  MGACMKPPHLAIV 72
            G CM P    +V
Sbjct: 93  RGFCMTPTERLLV 105

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 5   IGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGA 62
           IG G FG VY G      +VA+K    +     + +E    E+ T    RH +LV  +G 
Sbjct: 47  IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET---EIETLSFCRHPHLVSLIGF 103

Query: 63  CMKPPHLAIV 72
           C +   + ++
Sbjct: 104 CDERNEMILI 113

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 46.2 bits (110), Expect = 8e-07
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 3   DRIGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +++G+G +G+VY       G+ VA+K + V     E   +    E++  ++    ++V +
Sbjct: 35  EKLGEGSYGSVYKAIHKETGQIVAIKQVPV-----ESDLQEIIKEISIMQQCDSPHVVKY 89

Query: 60  MGACMKPPHLAIVTSKCNG 78
            G+  K   L IV   C  
Sbjct: 90  YGSYFKNTDLWIVMEYCGA 108

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 3   DRIGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
            +IG+G  G V        G  VAVK++D+         E    EV   R  +H N+V  
Sbjct: 51  VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDYQHFNVVEM 107

Query: 60  MGACMKPPHLAIVTSKCNG 78
             + +    L ++     G
Sbjct: 108 YKSYLVGEELWVLMEFLQG 126

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 8/76 (10%), Positives = 19/76 (25%), Gaps = 3/76 (3%)

Query: 1   MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           + + +  G    V+   +     + A+KV  +   +     E          +   E+  
Sbjct: 66  LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPE 125

Query: 58  LFMGACMKPPHLAIVT 73
                         V 
Sbjct: 126 EARDRRRLLLPSDAVA 141

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 4   RIGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +IG+G  GTVY       G+ VA++ +++     +   E    E+   R+ ++ N+V ++
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYL 83

Query: 61  GACMKPPHLAIVTSKCNG 78
            + +    L +V     G
Sbjct: 84  DSYLVGDELWVVMEYLAG 101

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 11/110 (10%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
              ++G G +G V             E A+K++    +           EV   +   H 
Sbjct: 41  RVKKLGSGAYGEVLLCRDKVTHV---ERAIKIIRKTSVSTSSN-SKLLEEVAVLKLLDHP 96

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           N++          +  +V     G  L+  I I++ KF     + + +Q+
Sbjct: 97  NIMKLYDFFEDKRNYYLVMECYKGGELFDEI-IHRMKFNEVDAAVIIKQV 145

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           +   +GKG FG V             E AVKV++     ++ T      EV   +K  H 
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQ---EYAVKVINKASAKNKDT-STILREVELLKKLDHP 81

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           N++             IV     G  L+  I I +++F+ +  + + +Q+
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQV 130

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 45.3 bits (107), Expect = 2e-06
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 6/81 (7%)

Query: 3   DRIGKGH--FGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
             IGKG     TV        GE V V+ ++++   +E      + E+   +   H N+V
Sbjct: 31  TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEM-VTFLQGELHVSKLFNHPNIV 89

Query: 58  LFMGACMKPPHLAIVTSKCNG 78
            +    +    L +VTS    
Sbjct: 90  PYRATFIADNELWVVTSFMAY 110

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 2   GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDD----EKTWEAFKLEVTTFRKTRHENL 56
           G+++G+G FG VY G  +   VAVK L           ++ ++    E+    K +HENL
Sbjct: 36  GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ---EIKVMAKCQHENL 92

Query: 57  VLFMGACMKPPHLAIV 72
           V  +G       L +V
Sbjct: 93  VELLGFSSDGDDLCLV 108

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 44.3 bits (105), Expect = 3e-06
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 2   GDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN 55
             +IG+G FG         +G    +  +K +++  +   K  E  + EV      +H N
Sbjct: 29  LQKIGEGSFGKAILVKSTEDGR---QYVIKEINISRMS-SKEREESRREVAVLANMKHPN 84

Query: 56  LVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKF 92
           +V +  +  +   L IV   C G  L+  I+  K   
Sbjct: 85  IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL 121

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 7/107 (6%)

Query: 1   MGDRIGKGHFGTVYNG---NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           + + IG+G +G V            A K +   +++D    + FK E+   +   H N++
Sbjct: 13  LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV---DRFKQEIEIMKSLDHPNII 69

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
                      + +V   C G  L+  + ++K  F  +  + + + +
Sbjct: 70  RLYETFEDNTDIYLVMELCTGGELFERV-VHKRVFRESDAARIMKDV 115

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 43.9 bits (104), Expect = 5e-06
 Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 5/96 (5%)

Query: 1   MGDRIGKGHFGTVYNG-NWH-GE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRK-TRHENL 56
             ++IG G FG+V+       G   A+K              A + EV       +H ++
Sbjct: 15  ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHV 73

Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKF 92
           V +  A  +  H+ I    CNG +L   I       
Sbjct: 74  VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM 109

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 43.4 bits (103), Expect = 7e-06
 Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           +   +GKG FG V             E AVKV++     ++ T      EV   +K  H 
Sbjct: 26  IVCMLGKGSFGEVLKCKDRITQQ---EYAVKVINKASAKNKDT-STILREVELLKKLDHP 81

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           N++             IV     G  L+  I I +++F+ +  + + +Q+
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQV 130

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 6/109 (5%)

Query: 2   GDRIGKGHFGTVYNG-NWH-GE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRK-TRHENLV 57
             R+G G +G V+   +   G   AVK     +   +        EV +  K  +H   V
Sbjct: 62  LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLA-EVGSHEKVGQHPCCV 120

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
               A  +   L + T  C G +L  +   +       ++    +    
Sbjct: 121 RLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLL 168

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 43.6 bits (103), Expect = 8e-06
 Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 16/110 (14%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           + + +G G FG V+       G        K ++  Y  D+      K E++   +  H 
Sbjct: 55  ILEELGSGAFGVVHRCVEKATGR---VFVAKFINTPYPLDK---YTVKNEISIMNQLHHP 108

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNI----HIYKEKFALNKMSTV 100
            L+    A      + ++    +G  L+  I    +   E   +N M   
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQA 158

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 43.5 bits (103), Expect = 8e-06
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 20/120 (16%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLD----------VDYLDDEKTWEAFKLE 44
              ++G G +G V         +   E A+KV+            D  + EK  E    E
Sbjct: 40  KVRKLGSGAYGEVLLCKEKNGHS---EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96

Query: 45  VTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           ++  +   H N++          +  +VT    G  L+  I I + KF     + + +QI
Sbjct: 97  ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-INRHKFDECDAANIMKQI 155

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 43.3 bits (102), Expect = 8e-06
 Identities = 15/110 (13%), Positives = 42/110 (38%), Gaps = 13/110 (11%)

Query: 2   GDRIGKGHFGTVYNG-NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL--V 57
             +IG G    V+   N   +  A+K ++++   D +T ++++ E+    K +  +   +
Sbjct: 61  LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKII 119

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYK---EKFALNKMSTVGQQI 104
                 +   ++ +V  +C    L + +   K        +      + +
Sbjct: 120 RLYDYEITDQYIYMVM-ECGNIDLNSWLKKKKSIDPWERKSYW----KNM 164

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 43.2 bits (102), Expect = 9e-06
 Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 10/106 (9%)

Query: 2   GDRIGKGHFGT-VYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-TRHENLVL 58
            D +G G  GT VY G +   +VAVK +  +             EV   R+   H N++ 
Sbjct: 29  KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADR------EVQLLRESDEHPNVIR 82

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           +           I    C   TL   +          +  T+ QQ 
Sbjct: 83  YFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQT 127

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 12/84 (14%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           + + +G G FG V+       GN     A K +   +  D+   E  + E+ T    RH 
Sbjct: 161 IHEELGTGAFGVVHRVTERATGN---NFAAKFVMTPHESDK---ETVRKEIQTMSVLRHP 214

Query: 55  NLVLFMGACMKPPHLAIVTSKCNG 78
            LV    A      + ++    +G
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSG 238

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 11/93 (11%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYL--DDEKTWEAFKLEVTTFRKTR 52
           +   IG+G +G V               A+K+++ + +   + K  E  K EV   +K  
Sbjct: 30  LKGAIGQGSYGVVRVAIENQTRA---IRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86

Query: 53  HENLVLFMGACMKPPHLAIVTSKCNGHTLYTNI 85
           H N+           ++ +V   C+G  L   +
Sbjct: 87  HPNIARLYEVYEDEQYICLVMELCHGGHLLDKL 119

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          + + +GKG F  V          E A  +++   L      +  + E    R  +H N+V
Sbjct: 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDH-QKLEREARICRLLKHPNIV 73

Query: 58 LFMGACMKPPHLAIVTSKCNG 78
              +  +  H  ++     G
Sbjct: 74 RLHDSISEEGHHYLIFDLVTG 94

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 1  MGDRIGKGHFGTV-YNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLV 57
              +G G  GTV + G++ G  VAVK + +D+ D         +E+    ++  H N++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI------ALMEIKLLTESDDHPNVI 72

Query: 58 LFMGACMKPPHLAIVTSKCNG 78
           +  +      L I    CN 
Sbjct: 73 RYYCSETTDRFLYIALELCNL 93

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 15/107 (14%), Positives = 44/107 (41%), Gaps = 7/107 (6%)

Query: 2   GDRIGKGHFGTVYNG-NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL--V 57
             +IG G    V+   N   +  A+K ++++   D +T ++++ E+    K +  +   +
Sbjct: 33  LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKII 91

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
                 +   ++ +V  +C    L + +   K+     +  +  + +
Sbjct: 92  RLYDYEITDQYIYMVM-ECGNIDLNSWLK-KKKSIDPWERKSYWKNM 136

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 15/110 (13%), Positives = 43/110 (39%), Gaps = 13/110 (11%)

Query: 2   GDRIGKGHFGTVYNG-NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH--ENLV 57
             +IG G    V+   N   +  A+K ++++   D +T ++++ E+    K +   + ++
Sbjct: 14  LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKII 72

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYK---EKFALNKMSTVGQQI 104
                 +   ++ +V  +C    L + +   K        +      + +
Sbjct: 73  RLYDYEITDQYIYMVM-ECGNIDLNSWLKKKKSIDPWERKSYW----KNM 117

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 8/68 (11%)

Query: 3  DRIGKGHFGTVYNG--NWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVL 58
          + +G G +G VY G     G+  A+KV+DV    DE   E  K E+   +K   H N+  
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDE--EEEIKQEINMLKKYSHHRNIAT 85

Query: 59 FMGACMKP 66
          + GA +K 
Sbjct: 86 YYGAFIKK 93

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 3e-05
 Identities = 30/184 (16%), Positives = 48/184 (26%), Gaps = 72/184 (39%)

Query: 25  KVLDVDYLDD---EKTWEAFKLE----VTTFRK-----------------------TRHE 54
             L V  L +    K W AF L     +TT  K                       T  E
Sbjct: 245 NCLLV--LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 55  NLVLFMG------------AC-MKPPHLAIVTSKC-NGHTLYTNI-HIYKEKF------A 93
              L +                  P  L+I+     +G   + N  H+  +K       +
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 94  LNKMSTVGQQ--------------ISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRIL 139
           LN +     +              I   +L   W          +     + KL K  ++
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV-----VNKLHKYSLV 417

Query: 140 ARSP 143
            + P
Sbjct: 418 EKQP 421

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           + + +GKG F  V        G    E A K+++   L      +  + E    RK +H 
Sbjct: 10  VKEELGKGAFSVVRRCVHKTTGL---EFAAKIINTKKLSARDF-QKLEREARICRKLQHP 65

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           N+V    +  +     +V     G  L+ +I + +E ++    S   QQI
Sbjct: 66  NIVRLHDSIQEESFHYLVFDLVTGGELFEDI-VAREFYSEADASHCIQQI 114

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 9/57 (15%), Positives = 12/57 (21%), Gaps = 3/57 (5%)

Query: 1   MGDRIGKGHFGTVYNGNW---HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
            G  +G+                   V V            +  K EV   R  R  
Sbjct: 82  RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 138

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 16/108 (14%)

Query: 3   DRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           + +G G FG V+       G    ++A K++    + D+   E  K E++   +  H NL
Sbjct: 95  EILGGGRFGQVHKCEETATGL---KLAAKIIKTRGMKDK---EEVKNEISVMNQLDHANL 148

Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNI----HIYKEKFALNKMSTV 100
           +    A      + +V    +G  L+  I    +   E   +  M  +
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI 196

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 11/86 (12%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYL--DDEKTWEAFKLEVTTFRKTR 52
           + + IGKG F  V        G    + AVK++DV         + E  K E +     +
Sbjct: 28  LCEVIGKGPFSVVRRCINRETGQ---QFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84

Query: 53  HENLVLFMGACMKPPHLAIVTSKCNG 78
           H ++V  +        L +V    +G
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDG 110

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 12/95 (12%), Positives = 21/95 (22%), Gaps = 8/95 (8%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE----VAVKVLDVDYLDDEKTWEAFKLEVT---TFRKTRH 53
            G  +G+             E      V V            +  K EV      R  ++
Sbjct: 77  RGTVLGQEDPYAYLEA-TDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKN 135

Query: 54  ENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIY 88
           +         + P  L     K     +  +    
Sbjct: 136 QKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDM 170

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 40.8 bits (96), Expect = 5e-05
 Identities = 22/111 (19%), Positives = 31/111 (27%), Gaps = 26/111 (23%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
               +G+G FG V       +       A+K +       E+       EV       H+
Sbjct: 10  EIAVLGQGAFGQVVKARNALDSR---YYAIKKIRH----TEEKLSTILSEVMLLASLNHQ 62

Query: 55  NLVLFMGA-------------CMKPPHLAIVTSKCNGHTLYTNIHIYKEKF 92
            +V +  A               K   L I    C   TLY  IH      
Sbjct: 63  YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ 113

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 40.8 bits (96), Expect = 6e-05
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           + + +GKG F  V        G    E A K+++   L      +  + E    RK +H 
Sbjct: 33  VKEELGKGAFSVVRRCVHKTTGL---EFAAKIINTKKLSARDF-QKLEREARICRKLQHP 88

Query: 55  NLVLFMGACMKPPHLAIVTSKCNG 78
           N+V    +  +     +V     G
Sbjct: 89  NIVRLHDSIQEESFHYLVFDLVTG 112

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 40.8 bits (96), Expect = 6e-05
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 6/80 (7%)

Query: 3   DRIGKGHFGTVYNG--NWHGEV-AVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVL 58
             IG+G +G+V        G++ AVK +     + E+  +   +++    ++     +V 
Sbjct: 28  GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQ--KQLLMDLDVVMRSSDCPYIVQ 85

Query: 59  FMGACMKPPHLAIVTSKCNG 78
           F GA  +     I     + 
Sbjct: 86  FYGALFREGDCWICMELMST 105

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 40.7 bits (95), Expect = 6e-05
 Identities = 21/151 (13%), Positives = 48/151 (31%), Gaps = 33/151 (21%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKL--EVTTFRK 50
           +   +G+G F  VY              +  +KV           WE +     +   + 
Sbjct: 69  VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQK-----PANPWEFYIGTQLMERLKP 123

Query: 51  TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLM 110
           +     + F  A +      +V    +  TL   I++YK         T  + + Q +++
Sbjct: 124 SMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKN--------TPEKVMPQGLVI 175

Query: 111 KCWSYKPSDRPDFITLMKSLEKLPKKRILAR 141
                        + ++  +E++    I+  
Sbjct: 176 SF----------AMRMLYMIEQVHDCEIIHG 196

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 40.8 bits (96), Expect = 6e-05
 Identities = 17/97 (17%), Positives = 36/97 (37%), Gaps = 10/97 (10%)

Query: 2   GDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
             ++G+G F  V      +     A+K +      +++  E  + E    R   H N++ 
Sbjct: 34  IQKLGEGGFSYVDLVEGLHDGHFYALKRILC---HEQQDREEAQREADMHRLFNHPNILR 90

Query: 59  FMGACMKPP----HLAIVTSKCNGHTLYTNIHIYKEK 91
            +  C++         ++       TL+  I   K+K
Sbjct: 91  LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDK 127

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 40.7 bits (96), Expect = 7e-05
 Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 4   RIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
            IG G +G         +G     +  K LD   + + +       EV   R+ +H N+V
Sbjct: 13  TIGTGSYGRCQKIRRKSDGK---ILVWKELDYGSMTEAEKQMLVS-EVNLLRELKHPNIV 68

Query: 58  LFMGACMKPP--HLAIVTSKCNGHTLYTNIHIYKEK 91
            +    +      L IV   C G  L + I    ++
Sbjct: 69  RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 40.5 bits (95), Expect = 7e-05
 Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 19/116 (16%)

Query: 1   MGDRIGKGHFGTVYNGNWH---GE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           + D +G+G    V+ G  H   G+  A+KV +          +    E    +K  H+N+
Sbjct: 13  LSDILGQGATANVFRG-RHKKTGDLFAIKVFNNISFLRPV--DVQMREFEVLKKLNHKNI 69

Query: 57  V-LF-MGACMKPPHLAIVTSKCNGHTLY------TNIHIYKEKFALNKMSTVGQQI 104
           V LF +       H  ++   C   +LY      +N +   E   L  +    + +
Sbjct: 70  VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL----RDV 121

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 40.3 bits (95), Expect = 9e-05
 Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 13/84 (15%)

Query: 1  MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
          + + +G+G FG V+      +         K + V   D        K E++     RH 
Sbjct: 9  IAEDLGRGEFGIVHRCVETSSKK---TYMAKFVKVKGTDQVL----VKKEISILNIARHR 61

Query: 55 NLVLFMGACMKPPHLAIVTSKCNG 78
          N++    +      L ++    +G
Sbjct: 62 NILHLHESFESMEELVMIFEFISG 85

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 1   MGDRIGKGHFGTVYNG---NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
              ++G G FG V+     +   E  +K ++ D        E  + E+   +   H N++
Sbjct: 26  FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPM--EQIEAEIEVLKSLDHPNII 83

Query: 58  LFMGACMKPPHLAIVTSKCNG 78
                     ++ IV   C G
Sbjct: 84  KIFEVFEDYHNMYIVMETCEG 104

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 19/116 (16%)

Query: 1   MGDRIGKGHFGTVYNGNWH---GE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           + D +G+G    V+ G  H   G+  A+KV +          +    E    +K  H+N+
Sbjct: 13  LSDILGQGATANVFRG-RHKKTGDLFAIKVFNNISFLRPV--DVQMREFEVLKKLNHKNI 69

Query: 57  V-LF-MGACMKPPHLAIVTSKCNGHTLYT------NIHIYKEKFALNKMSTVGQQI 104
           V LF +       H  ++   C   +LYT      N +   E   L  +    + +
Sbjct: 70  VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL----RDV 121

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 1  MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
              IG G+FG      +      VAVK ++     DE      + E+   R  RH N+V
Sbjct: 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENV----QREIINHRSLRHPNIV 79

Query: 58 LFMGACMKPPHLAIVT 73
           F    + P HLAI+ 
Sbjct: 80 RFKEVILTPTHLAIIM 95

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
            + +G G F  V+           A+K +       +    + + E+   +K +HEN+V
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRD---SSLENEIAVLKKIKHENIV 69

Query: 58 LFMGACMKPPHLAIVTSKCNG 78
                    H  +V    +G
Sbjct: 70 TLEDIYESTTHYYLVMQLVSG 90

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 27/120 (22%), Positives = 39/120 (32%), Gaps = 23/120 (19%)

Query: 1   MGDRIGKGHFGTVYNGNWH---GE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           M +R+G G FG V     H   GE VA+K    +     +  E + LE+   +K  H N+
Sbjct: 18  MKERLGTGGFGYVLRW-IHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMKKLNHPNV 74

Query: 57  V-LF-----MGACMKPPHLAIVTSKCNGHTLYT------NIHIYKEKFALNKMSTVGQQI 104
           V        +          +    C G  L        N    KE      +      I
Sbjct: 75  VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL----SDI 130

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 17/105 (16%)

Query: 2   GDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
              +G+G FG V+   N       A+K + +   +  +  E    EV    K  H  +V 
Sbjct: 10  IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR--EKVMREVKALAKLEHPGIVR 67

Query: 59  FMGACM------------KPPHLAIVTSKCNGHTLYTNIHIYKEK 91
           +  A +               +L I    C    L   ++     
Sbjct: 68  YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTI 112

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 1   MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
            G  +GKG F   +   + +     A K++    L      E   +E++  R   H+++V
Sbjct: 45  RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 104

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLY 82
            F G       + +V   C   +L 
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLL 129

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 12/87 (13%)

Query: 1  MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTW---EAFKLEVTTFRKT 51
          MG+ +G G F  V        G    E A K +    L   +     E  + EV   R+ 
Sbjct: 9  MGEELGSGQFAIVRKCRQKGTGK---EYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65

Query: 52 RHENLVLFMGACMKPPHLAIVTSKCNG 78
          RH N++           + ++    +G
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSG 92

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 1  MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          +GD +G G FG V    +     +VAVK+L+   +         K E+   +  RH +++
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 1   MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
            G  +GKG F   +   + +     A K++    L      E   +E++  R   H+++V
Sbjct: 19  RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 78

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLY 82
            F G       + +V   C   +L 
Sbjct: 79  GFHGFFEDNDFVFVVLELCRRRSLL 103

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 2  GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           D++G G   TVY         +VA+K + +   + E+T + F+ EV    +  H+N+V
Sbjct: 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 3  DRIGKGHFGTVYNG--NWHGEV-AVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVL 58
            +G+G +G V        G++ AVK +      + +  +   +++    +T      V 
Sbjct: 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRAT--VNSQEQKRLLMDLDISMRTVDCPFTVT 70

Query: 59 FMGACMKPPHLAIVTSKCNG 78
          F GA  +   + I     + 
Sbjct: 71 FYGALFREGDVWICMELMDT 90

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 20/112 (17%)

Query: 3   DRIGKGHFGTVY------NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-TRHEN 55
           D +G+G    V             E AVK+++               EV    +   H N
Sbjct: 19  DVLGEGAHARVQTCINLITSQ---EYAVKIIEKQPGHIR---SRVFREVEMLYQCQGHRN 72

Query: 56  LVLFMGACMKPPHLAIVTSKCNGHTLYTNIH---IYKEKFALNKMSTVGQQI 104
           ++  +    +     +V  K  G ++ ++IH    + E  A    S V Q +
Sbjct: 73  VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA----SVVVQDV 120

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 37.9 bits (88), Expect = 6e-04
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 5/82 (6%)

Query: 3   DRIGKGHFGTVYNG--NWHGEV-AVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
             +G G+ G V+       G V A K++ ++             E+    +     +V F
Sbjct: 39  SELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGF 96

Query: 60  MGACMKPPHLAIVTSKCNGHTL 81
            GA      ++I     +G +L
Sbjct: 97  YGAFYSDGEISICMEHMDGGSL 118

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 1  MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          +G  +GKG FG VY          +A+KVL    L+ E      + E+      RH N++
Sbjct: 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNIL 77

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 3/59 (5%)

Query: 2  GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          G+ +G G    V+         +VAVKVL  D   D   +  F+ E        H  +V
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 75

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 1  MGDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
          + + +G+G FG V     H     +VA+K +    L         + E++  +  RH ++
Sbjct: 13 IRETLGEGSFGKVKLAT-HYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI 71

Query: 57 V 57
          +
Sbjct: 72 I 72

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 37.4 bits (87), Expect = 8e-04
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 15/90 (16%)

Query: 1   MGDRIGKGHFGTVY------NGNWHGEVAVKVLDVDYL-----DDEKTWEAFKLEVTTFR 49
             D IG+G    V        G+   E AVK+++V          E+  EA + E    R
Sbjct: 98  PKDVIGRGVSSVVRRCVHRATGH---EFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154

Query: 50  K-TRHENLVLFMGACMKPPHLAIVTSKCNG 78
           +   H +++  + +      + +V      
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRK 184

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 1  MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          +G  +GKG FG VY          +A+KVL    L+        + EV      RH N++
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 72

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 37.2 bits (87), Expect = 9e-04
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 1  MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEA-FKLEVTTFRKTRHENL 56
          MGD +G+G +G V    +       AVK+L    L      EA  K E+   R+ RH+N+
Sbjct: 9  MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68

Query: 57 V 57
          +
Sbjct: 69 I 69

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 37.5 bits (87), Expect = 9e-04
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 1  MGDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
          +GD +G G FG V  G  H     +VAVK+L+   +         + E+   +  RH ++
Sbjct: 20 LGDTLGVGTFGKVKVGK-HELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78

Query: 57 V 57
          +
Sbjct: 79 I 79

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	157
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.97
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.97
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.96
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.96
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.95
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.95
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.94
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.93
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.93
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.93
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.93
3uqc_A	286	Probable conserved transmembrane protein; structur	99.93
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.93
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.92
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.92
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.92
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.92
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.92
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.92
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.92
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.92
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.92
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.92
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.92
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.92
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.92
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.92
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.92
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.92
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.92
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.92
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.92
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.92
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.92
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.92
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.92
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.92
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.92
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.92
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.92
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.91
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.91
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.91
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.91
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.91
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.91
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.91
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.91
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.91
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.91
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.91
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.91
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.91
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.91
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.91
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.91
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.91
3niz_A	311	Rhodanese family protein; structural genomics, str	99.91
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.91
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.91
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.91
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.91
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.91
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.91
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.91
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.91
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.91
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.91
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.91
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.91
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.91
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.9
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.9
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.9
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.9
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.9
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.9
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.9
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.9
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.9
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.9
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.9
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.9
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.9
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.9
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.9
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.9
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.9
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.9
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.9
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.9
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.9
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.9
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.9
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.9
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.9
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.9
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.9
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.9
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.9
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.9
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.9
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.9
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.9
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.9
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.9
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.9
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.9
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.9
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.9
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.9
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.9
3bhy_A	283	Death-associated protein kinase 3; death associate	99.9
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.9
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.9
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.9
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.9
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.9
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.9
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.9
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.9
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.9
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.9
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.89
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.89
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.89
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.89
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.89
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.89
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.89
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.89
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.89
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.89
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.89
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.89
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.89
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.89
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.89
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.89
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.89
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.89
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.89
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.89
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.89
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.89
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.89
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.89
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.89
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.89
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.89
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.89
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.89
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.89
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.89
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.89
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.89
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.89
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.89
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.88
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.88
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.88
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.88
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.88
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.88
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.88
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.88
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.88
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.88
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.88
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.88
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.88
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.88
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.88
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.88
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.88
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.87
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.87
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.87
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.87
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.87
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.87
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.87
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.87
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.87
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.87
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.87
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.87
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.87
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.87
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.87
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.87
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.87
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.87
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.87
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.86
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.86
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.86
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.86
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.86
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.86
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.86
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.86
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.86
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.86
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.86
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.86
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.86
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.86
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.85
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.85
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.85
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.85
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.85
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.85
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.84
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.84
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.84
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.84
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.84
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.84
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.84
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.83
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.83
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.83
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.83
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.83
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.83
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.82
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.82
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.82
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.82
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.82
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.82
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.81
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.81
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.75
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.72
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.66
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.57
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.12
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.91
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.62
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.38
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.24
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.07
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.99
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.9
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.81
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.52
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.45
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.03
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.83
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.61
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	96.21
4aoj_A	329	High affinity nerve growth factor receptor; transf	96.17
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.0
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	95.81
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	95.29
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	95.24
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	95.19
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	95.08
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	95.03
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	94.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	94.65
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	94.29
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.23
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	93.87
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	93.1
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	92.84
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	92.58
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	92.43
3q4u_A	301	Activin receptor type-1; structural genomics conso	92.23
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	92.19
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	92.14
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	92.05
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	91.92
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	91.83
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	91.59
3soc_A	322	Activin receptor type-2A; structural genomics cons	91.37
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	91.18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	90.89
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	90.88
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	90.86
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	90.72
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	90.71
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	90.62
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	90.51
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	90.37
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	90.34
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	90.08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	89.93
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	89.63
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	89.62
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	89.52
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	89.48
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	89.27
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	89.21
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	89.05
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	89.01
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	88.9
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	88.87
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	88.61
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	88.46
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	88.36
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	88.27
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	88.26
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	88.16
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	88.07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	87.83
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	87.75
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	87.69
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	87.66
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	87.65
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	87.64
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	87.58
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	87.56
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	87.54
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	87.47
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	87.31
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	87.24
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	87.16
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	87.15
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	87.06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	86.64
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	86.61
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	86.42
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	86.37
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	86.35
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	86.15
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	86.13
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	86.12
3pls_A	298	Macrophage-stimulating protein receptor; protein k	86.1
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	86.1
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	85.4
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	85.36
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	85.33
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	85.15
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	85.11
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	84.9
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	84.84
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	84.81
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	84.77
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	84.58
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	84.41
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	84.13
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	84.03
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	83.99
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	83.92
2a19_B	284	Interferon-induced, double-stranded RNA-activated	83.71
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	83.68
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	83.6
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	80.13

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.2e-33  Score=195.59  Aligned_cols=128  Identities=40%  Similarity=0.699  Sum_probs=114.2

Q ss_pred             CCccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            2 GDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      ++.||+|+||.||+|.+++++|||+++... .+....+.|.+|+.++++++|||||++++++. .+.+++|||||++|+|
T Consensus        41 ~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL  118 (307)
T 3omv_A           41 STRIGSGSFGTVYKGKWHGDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSL  118 (307)
T ss_dssp             EEECCCCSSSEEEEEESSSEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBH
T ss_pred             eeEEeeCCCcEEEEEEECCcEEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCCH
Confidence            467999999999999998899999997654 45667788999999999999999999999875 4568999999999999


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      .+++...+..+++.++..++.|++.                      +|+|+|+++|+|||+|+.|+|..+.
T Consensus       119 ~~~l~~~~~~l~~~~~~~i~~qia~----------------------gL~yLH~~~IiHRDlKp~NILl~~~  168 (307)
T 3omv_A          119 YKHLHVQETKFQMFQLIDIARQTAQ----------------------GMDYLHAKNIIHRDMKSNNIFLHEG  168 (307)
T ss_dssp             HHHHHTSCCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCSCCCSSSEEEETT
T ss_pred             HHHHhhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccCCccCHHHEEECCC
Confidence            9999876657999999999998888                      8888999999999999999998654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.3e-32  Score=195.86  Aligned_cols=130  Identities=22%  Similarity=0.294  Sum_probs=109.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .||+|.+.... .+....+.+.+|+.+++.++|||||++++++.+.+.+|+|||||++
T Consensus        29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~g  107 (350)
T 4b9d_A           29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISR-MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG  107 (350)
T ss_dssp             EEEC------CEEEEEETTTCCEEEEEEEECTT-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEehHH-CCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence            4679999999999999865   49999998765 4556678899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ ..+++.++..++.|++.                      +|+++|+++|+|||+|+.|+|..+.+
T Consensus       108 g~L~~~i~~~~~~~~~e~~~~~~~~qi~~----------------------aL~ylH~~~IiHRDlKp~NILl~~~g  162 (350)
T 4b9d_A          108 GDLFKRINAQKGVLFQEDQILDWFVQICL----------------------ALKHVHDRKILHRDIKSQNIFLTKDG  162 (350)
T ss_dssp             CBHHHHHHHTTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCEETTCCGGGEEECTTC
T ss_pred             CcHHHHHHHcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeccCCHHHEEECCCC
Confidence            99999997654 35789999999998888                      88889999999999999999987654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.2e-33  Score=198.34  Aligned_cols=130  Identities=21%  Similarity=0.156  Sum_probs=114.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.++.   .+|+|++++....+....+.+.+|+.+++.++||||+++++++.+.+.+|++||||++
T Consensus        37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~g  116 (311)
T 4aw0_A           37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN  116 (311)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence            5789999999999999865   4999999764322233466789999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.++++..+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|..+.+
T Consensus       117 G~L~~~i~~~~-~l~e~~~~~~~~qi~~----------------------al~ylH~~~IiHRDlKPeNILl~~~g  169 (311)
T 4aw0_A          117 GELLKYIRKIG-SFDETCTRFYTAEIVS----------------------ALEYLHGKGIIHRDLKPENILLNEDM  169 (311)
T ss_dssp             EEHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECTTS
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCccCCCCHHHeEEcCCC
Confidence            99999998765 7999999999998777                      88889999999999999999987654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.9e-32  Score=191.89  Aligned_cols=128  Identities=22%  Similarity=0.324  Sum_probs=111.3

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|++.+        .||||.++.   .+....+.|.+|+.++++++|||||++++++...+.+++||
T Consensus        18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~---~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~   94 (299)
T 4asz_A           18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---ASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF   94 (299)
T ss_dssp             EEEEEC--CCCEEEEEECSCC----CEEEEEEEECS---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC---CChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEE
Confidence            4689999999999998742        399999976   44566788999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccccccc
Q psy697           74 SKCNGHTLYTNIHIYK------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILAR  141 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~r  141 (157)
                      |||++|+|.++++..+            ..+++.++..++.|++.                      +|+|+|+++|+||
T Consensus        95 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~----------------------gl~yLH~~~iiHR  152 (299)
T 4asz_A           95 EYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA----------------------GMVYLASQHFVHR  152 (299)
T ss_dssp             ECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCS
T ss_pred             EcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccC
Confidence            9999999999997642            25899999999998888                      8888999999999


Q ss_pred             CCCCccccccccc
Q psy697          142 SPSHPLNLSRSAE  154 (157)
Q Consensus       142 d~k~~~~~~~~~~  154 (157)
                      |+|+.|+|..+..
T Consensus       153 DlKp~NILl~~~~  165 (299)
T 4asz_A          153 DLATRNCLVGENL  165 (299)
T ss_dssp             CCSGGGEEECGGG
T ss_pred             ccCHhhEEECCCC
Confidence            9999999987653

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=7.1e-32  Score=191.29  Aligned_cols=127  Identities=22%  Similarity=0.318  Sum_probs=112.6

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|++++        .||||.++.   .+....+.|.+|+.++++++|||||++++++...+.+++||
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~---~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~  122 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF  122 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC---CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc---CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            4679999999999998742        499999976   45667788999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc--------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccccc
Q psy697           74 SKCNGHTLYTNIHIYK--------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRIL  139 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~--------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~  139 (157)
                      |||++|+|.++++..+              .++++.++..++.|++.                      +|+|+|+++|+
T Consensus       123 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~----------------------gl~yLH~~~ii  180 (329)
T 4aoj_A          123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAA----------------------GMVYLAGLHFV  180 (329)
T ss_dssp             ECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHH----------------------HHHHHHHTTCC
T ss_pred             EcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHH----------------------HHHHHhcCCee
Confidence            9999999999997532              35899999999998888                      88889999999


Q ss_pred             ccCCCCcccccccc
Q psy697          140 ARSPSHPLNLSRSA  153 (157)
Q Consensus       140 ~rd~k~~~~~~~~~  153 (157)
                      |||+|+.|+|..+.
T Consensus       181 HRDLKp~NILl~~~  194 (329)
T 4aoj_A          181 HRDLATRNCLVGQG  194 (329)
T ss_dssp             CSCCCGGGEEEETT
T ss_pred             cccccHhhEEECCC
Confidence            99999999998654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.97  E-value=1.1e-31  Score=187.07  Aligned_cols=126  Identities=25%  Similarity=0.277  Sum_probs=110.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec----CCceEEEEec
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK----PPHLAIVTSK   75 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~   75 (157)
                      +.||+|+||.||+|.+..   .||+|.+.... ......+.+.+|+.++++++|||||++++++..    .+.+++||||
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy  110 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL  110 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhh-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence            469999999999999865   49999997655 455667889999999999999999999999865    3458999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc--ccccCCCCccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR--ILARSPSHPLNLSRS  152 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~--~~~rd~k~~~~~~~~  152 (157)
                      |++|+|.+++.+.+ .+++..+..++.|++.                      +|+++|+++  |+|||+|+.|+|..+
T Consensus       111 ~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------aL~ylH~~~~~IiHRDlKp~NILl~~  166 (290)
T 3fpq_A          111 MTSGTLKTYLKRFK-VMKIKVLRSWCRQILK----------------------GLQFLHTRTPPIIHRDLKCDNIFITG  166 (290)
T ss_dssp             CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHTSSSCCCCCCCCGGGEEESS
T ss_pred             CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCCEEecccChhheeEEC
Confidence            99999999998765 7999999999998888                      777788877  999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.97  E-value=6.4e-32  Score=186.96  Aligned_cols=129  Identities=19%  Similarity=0.254  Sum_probs=108.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .||+|++++....+......+.+|+.+++.++||||+++++++.+.+.+|++|||| +
T Consensus        18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~   96 (275)
T 3hyh_A           18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G   96 (275)
T ss_dssp             EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence            4689999999999999854   49999998765444555678999999999999999999999999999999999999 6


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++.++..++.|++.                      +|+++|+++|+|||+|+.|+|..+.+
T Consensus        97 g~L~~~l~~~~-~l~e~~~~~~~~qi~~----------------------al~ylH~~~IiHRDiKP~NILl~~~~  149 (275)
T 3hyh_A           97 NELFDYIVQRD-KMSEQEARRFFQQIIS----------------------AVEYCHRHKIVHRDLKPENLLLDEHL  149 (275)
T ss_dssp             EEHHHHHHHSC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCTTTEEECTTC
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccccCChHHeEECCCC
Confidence            89999998765 7999999999998887                      88889999999999999999987654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=1e-31  Score=188.99  Aligned_cols=129  Identities=22%  Similarity=0.351  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+.+        .||||.++..  .+....+.|.+|+.++++++|||||+++|++...+.+++||
T Consensus        31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~  108 (308)
T 4gt4_A           31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK--AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIF  108 (308)
T ss_dssp             EEEEEECSSCEEEEEEEC-------CEEEEEEECCC---CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcc--cChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEE
Confidence            4679999999999998732        4999999754  23345678999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhh---------------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccc
Q psy697           74 SKCNGHTLYTNIHIY---------------KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRI  138 (157)
Q Consensus        74 e~~~~g~L~~~i~~~---------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~  138 (157)
                      |||++|+|.+++..+               +..+++.++..++.||+.                      +|+|+|+++|
T Consensus       109 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~----------------------gl~yLH~~~i  166 (308)
T 4gt4_A          109 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA----------------------GMEYLSSHHV  166 (308)
T ss_dssp             ECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHH----------------------HHHHHHHTTC
T ss_pred             EcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCC
Confidence            999999999999653               235899999999998888                      8888999999


Q ss_pred             cccCCCCccccccccc
Q psy697          139 LARSPSHPLNLSRSAE  154 (157)
Q Consensus       139 ~~rd~k~~~~~~~~~~  154 (157)
                      +|||+|+.|+|..+..
T Consensus       167 iHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          167 VHKDLATRNVLVYDKL  182 (308)
T ss_dssp             CCSCCSGGGEEECGGG
T ss_pred             CCCCccccceEECCCC
Confidence            9999999999987643

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.97  E-value=3.6e-32  Score=193.30  Aligned_cols=126  Identities=22%  Similarity=0.230  Sum_probs=110.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.++.   .||+|+++...   ....+.+.+|+.+++.++|||||++++++...+.+|+|||||++
T Consensus        79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  155 (346)
T 4fih_A           79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  155 (346)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG---CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             eEEeecCcCeEEEEEEECCCCCEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence            4579999999999999865   49999997643   22345678999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...  .+++.++..++.|++.                      +|+|+|+++|+|||+|+.|+|..+.+
T Consensus       156 g~L~~~l~~~--~l~e~~~~~~~~qi~~----------------------aL~ylH~~~IiHRDlKp~NILl~~~g  207 (346)
T 4fih_A          156 GALTDIVTHT--RMNEEQIAAVCLAVLQ----------------------ALSVLHAQGVIHRDIKSDSILLTHDG  207 (346)
T ss_dssp             EEHHHHHHHS--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CcHHHHHHcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccccCCHHHEEECCCC
Confidence            9999999753  6999999999998777                      88889999999999999999987654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.97  E-value=1.4e-31  Score=194.51  Aligned_cols=126  Identities=22%  Similarity=0.230  Sum_probs=111.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.++.   .||+|.+....   ....+.+.+|+.+++.++|||||++++++...+.+|+|||||++
T Consensus       156 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g  232 (423)
T 4fie_A          156 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  232 (423)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEESTT---CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eeEeccCcCcEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence            4679999999999999865   49999998643   23345688999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.++++..  .+++.++..++.|++.                      +|+|+|+++|+|||+|+.|+|..+.+
T Consensus       233 G~L~~~i~~~--~l~e~~~~~~~~qil~----------------------aL~ylH~~~IiHRDiKp~NILl~~~g  284 (423)
T 4fie_A          233 GALTDIVTHT--RMNEEQIAAVCLAVLQ----------------------ALSVLHAQGVIHRDIKSDSILLTHDG  284 (423)
T ss_dssp             EEHHHHHHHS--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSTTTEEECTTC
T ss_pred             CcHHHHHhcc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecccCCHHHEEEcCCC
Confidence            9999999753  6999999999998777                      88889999999999999999987654

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.97  E-value=2.5e-31  Score=188.39  Aligned_cols=122  Identities=22%  Similarity=0.206  Sum_probs=108.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .++||+|+||.||+|.++.   .||+|.++....        ..+|+.+++.++|||||++++++.+.+.+|+|||||++
T Consensus        63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g  134 (336)
T 4g3f_A           63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG  134 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence            3569999999999999865   499999986532        13689999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.++++..+ .+++..+..++.|++.                      +|+|+|+++|+|||+|+.|+|..+.+
T Consensus       135 g~L~~~l~~~~-~l~e~~~~~~~~qi~~----------------------aL~ylH~~~IiHRDlKp~NILl~~~g  187 (336)
T 4g3f_A          135 GSLGQLIKQMG-CLPEDRALYYLGQALE----------------------GLEYLHTRRILHGDVKADNVLLSSDG  187 (336)
T ss_dssp             CBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECSCCCGGGEEECTTS
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCceecccCHHHEEEeCCC
Confidence            99999998765 7999999999998888                      88889999999999999999987653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.97  E-value=3.4e-32  Score=190.65  Aligned_cols=129  Identities=19%  Similarity=0.177  Sum_probs=106.8

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ++.||+|+||.||+|+...      .+|+|++++... .......+.+|+.+++.++||||+++++++.+.+.+|++|||
T Consensus        29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy  107 (304)
T 3ubd_A           29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL-KVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDF  107 (304)
T ss_dssp             EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE-EEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECC
T ss_pred             EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc-ChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEc
Confidence            5689999999999998732      399999976542 222334578899999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++|+|.+++...+ .+++.++..++.|++.                      +|+++|+++|+|||+|+.|+|..+.+
T Consensus       108 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~----------------------aL~ylH~~~IiHRDlKp~NILl~~~g  163 (304)
T 3ubd_A          108 LRGGDLFTRLSKEV-MFTEEDVKFYLAELAL----------------------ALDHLHSLGIIYRDLKPENILLDEEG  163 (304)
T ss_dssp             CTTCEEHHHHHHHC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSSCCGGGEEECTTS
T ss_pred             CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCcCCCCCHHHeEEcCCC
Confidence            99999999998766 7999999999998888                      88889999999999999999987654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.97  E-value=1.9e-30  Score=181.88  Aligned_cols=129  Identities=20%  Similarity=0.231  Sum_probs=106.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC-----------
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP-----------   67 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----------   67 (157)
                      .+.||+|+||.||+|.++.   .+|+|.++..  ......+.+.+|+.++++++|||||++++++...+           
T Consensus        10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~   87 (299)
T 4g31_A           10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP--NRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK   87 (299)
T ss_dssp             EEEEEECC--EEEEEEETTTCCEEEEEEEEEC--SSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------C
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCC
Confidence            4689999999999999864   4999999765  34556778999999999999999999999987543           


Q ss_pred             -ceEEEEecCCCCCHhHHHhhhc--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           68 -HLAIVTSKCNGHTLYTNIHIYK--EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        68 -~~~lv~e~~~~g~L~~~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                       .+|++||||++|+|.+++....  ...++..+..++.|++.                      +|+++|+++|+|||+|
T Consensus        88 ~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~----------------------al~ylH~~~IiHRDlK  145 (299)
T 4g31_A           88 VYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE----------------------AVEFLHSKGLMHRDLK  145 (299)
T ss_dssp             EEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCC
T ss_pred             cEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHH----------------------HHHHHHHCcCccccCc
Confidence             3799999999999999998654  12445567778887777                      8888999999999999


Q ss_pred             Cccccccccc
Q psy697          145 HPLNLSRSAE  154 (157)
Q Consensus       145 ~~~~~~~~~~  154 (157)
                      +.|+|..+.+
T Consensus       146 p~NILl~~~~  155 (299)
T 4g31_A          146 PSNIFFTMDD  155 (299)
T ss_dssp             GGGEEECTTC
T ss_pred             HHHeEECCCC
Confidence            9999987654

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.96  E-value=1e-29  Score=178.67  Aligned_cols=133  Identities=26%  Similarity=0.338  Sum_probs=107.0

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC----ceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP----HLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|.+.+ .||||.++..    .........|+..+..++||||+++++++...+    .+++|||||
T Consensus         8 ~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~   83 (303)
T 3hmm_A            8 QESIGKGRFGEVWRGKWRGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH   83 (303)
T ss_dssp             EEEEEECSSSEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             EEEEeeCCCeEEEEEEECCEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence            5789999999999999977 5999999753    122223345666677889999999999997653    579999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|+|.++++..  .+++..+..++.|++. ++.|+|++             .+.+.+..+|+|||+|+.|+|..+..
T Consensus        84 ~~gsL~~~l~~~--~l~~~~~~~i~~~ia~-gl~ylH~~-------------~~~~~~~~~IiHRDlKp~NILl~~~~  145 (303)
T 3hmm_A           84 EHGSLFDYLNRY--TVTVEGMIKLALSTAS-GLAHLHME-------------IVGTQGKPAIAHRDLKSKNILVKKNG  145 (303)
T ss_dssp             TTCBHHHHHHHC--CBCHHHHHHHHHHHHH-HHHHHHCC-------------BCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred             CCCcHHHHHHhC--CCCHHHHHHHHHHHHH-HHHHHHHh-------------hhhccCCCCEeeccCCcccEEECCCC
Confidence            999999999864  6899999999999999 77776665             23344556999999999999987653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.96  E-value=3.4e-29  Score=178.99  Aligned_cols=129  Identities=25%  Similarity=0.399  Sum_probs=110.1

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC-CceeeeeeEEecC-CceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH-ENLVLFMGACMKP-PHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~-~~~~l   71 (157)
                      ++.||+|+||.||+|.+.+        .||+|.+...  ......+.+.+|+.++.+++| ||||+++++|..+ +.+++
T Consensus        69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~--~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~i  146 (353)
T 4ase_A           69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV  146 (353)
T ss_dssp             EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred             eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc--cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEE
Confidence            5689999999999999854        3899999765  345567789999999999965 8999999998764 56899


Q ss_pred             EEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697           72 VTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      |||||++|+|.++++..+               ..+++..+..++.||+.                      +|+|+|++
T Consensus       147 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~----------------------gl~yLH~~  204 (353)
T 4ase_A          147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK----------------------GMEFLASR  204 (353)
T ss_dssp             EEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHH----------------------HHHHHHHT
T ss_pred             EEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHH----------------------HHHhHhhC
Confidence            999999999999997642               24789999999998888                      88889999


Q ss_pred             cccccCCCCccccccccc
Q psy697          137 RILARSPSHPLNLSRSAE  154 (157)
Q Consensus       137 ~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|||+|+.|+|..+..
T Consensus       205 ~iiHRDLK~~NILl~~~~  222 (353)
T 4ase_A          205 KCIHRDLAARNILLSEKN  222 (353)
T ss_dssp             TCCCSCCSGGGEEECGGG
T ss_pred             CeecCccCccceeeCCCC
Confidence            999999999999987653

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.96  E-value=3.9e-29  Score=181.21  Aligned_cols=128  Identities=16%  Similarity=0.196  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec------CCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK------PPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~~~lv   72 (157)
                      ++.||+|+||.||+|.+..   .||+|+++... ......+.+.+|+.+++.++||||+++++++..      .+.+|+|
T Consensus        59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~iv  137 (398)
T 4b99_A           59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV  137 (398)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred             EEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEE
Confidence            4689999999999999865   49999998754 455667788999999999999999999998764      3578999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ||||+ |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|...
T Consensus       138 mE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~----------------------al~ylH~~~iiHRDlKP~NIl~~~  193 (398)
T 4b99_A          138 LDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLR----------------------GLKYMHSAQVIHRDLKPSNLLVNE  193 (398)
T ss_dssp             EECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECT
T ss_pred             EeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCcCcCCCcCccccccCC
Confidence            99995 68999998755 7999999999998777                      888899999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       194 ~~  195 (398)
T 4b99_A          194 NC  195 (398)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.95  E-value=2e-28  Score=184.77  Aligned_cols=127  Identities=17%  Similarity=0.211  Sum_probs=113.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.++.   .+|+|.+..   ......+.+.+|+.+|+.++||||+++++++...+.++++||||++
T Consensus       162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~---~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~g  238 (573)
T 3uto_A          162 HEELGTGAFGVVHRVTERATGNNFAAKFVMT---PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG  238 (573)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEC---CSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEec---cchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence            4679999999999999865   499999976   3455677889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+++....+.+++.++..++.||+.                      +|+++|+++|+|||+|+.|+|..+.
T Consensus       239 g~L~~~i~~~~~~l~e~~~~~~~~qi~~----------------------al~ylH~~~iiHRDlKp~Nill~~~  291 (573)
T 3uto_A          239 GELFEKVADEHNKMSEDEAVEYMRQVCK----------------------GLCHMHENNYVHLDLKPENIMFTTK  291 (573)
T ss_dssp             CBHHHHHTCTTSCEEHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEESSS
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeccCChhhccccCC
Confidence            9999999765557999999999998777                      8888999999999999999998654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.95  E-value=7.8e-29  Score=188.04  Aligned_cols=130  Identities=20%  Similarity=0.199  Sum_probs=107.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCC---CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL---DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ++.||+|+||.||+|+.+.   .||+|++++...   ........-..++.++..++||||+++++++.+.+.+|+||||
T Consensus       194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy  273 (689)
T 3v5w_A          194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL  273 (689)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence            5789999999999999866   499999975431   1111122223335666778999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+||+|.+++...+ .+++..+..++.||+.                      +|+++|+++|+|||+|+.|+|..+.+
T Consensus       274 ~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~----------------------aL~yLH~~gIiHRDLKPeNILld~~G  329 (689)
T 3v5w_A          274 MNGGDLHYHLSQHG-VFSEADMRFYAAEIIL----------------------GLEHMHNRFVVYRDLKPANILLDEHG  329 (689)
T ss_dssp             CCSCBHHHHHHHHC-CCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECCCCSGGGEEECTTS
T ss_pred             CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCchHHeEEeCCC
Confidence            99999999998765 7999999999997777                      88889999999999999999987654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.94  E-value=3.6e-27  Score=169.19  Aligned_cols=121  Identities=16%  Similarity=0.186  Sum_probs=105.2

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|..+.      .+|+|.+....     ....+.+|+.++..+ +||||+++++++...+.++++||
T Consensus        26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE  100 (361)
T 4f9c_A           26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP  100 (361)
T ss_dssp             EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred             EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence            5689999999999998742      49999986542     234578899999988 79999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||++|+|.+++.    .+++.++..++.|++.                      +|+++|+++|+|||+|+.|+|..+.
T Consensus       101 ~~~g~~L~~~~~----~l~~~~~~~~~~qll~----------------------al~ylH~~gIiHRDiKPeNiLl~~~  153 (361)
T 4f9c_A          101 YLEHESFLDILN----SLSFQEVREYMLNLFK----------------------ALKRIHQFGIVHRDVKPSNFLYNRR  153 (361)
T ss_dssp             CCCCCCHHHHHT----TCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEEETT
T ss_pred             CCCcccHHHHHc----CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeCcCCHHHeEEeCC
Confidence            999999999984    5899999999997777                      8888999999999999999998653

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.93  E-value=8.5e-26  Score=160.32  Aligned_cols=129  Identities=19%  Similarity=0.219  Sum_probs=114.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|++.... .+....+.+.+|+.+++.++||||+++++++...+.++++|||+++
T Consensus        20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~   98 (328)
T 3fe3_A           20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG   98 (328)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCC
Confidence            4689999999999999844   59999998765 4556677889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        99 ~~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------al~~lH~~~ivHrDlkp~NIll~~~~  151 (328)
T 3fe3_A           99 GEVFDYLVAHG-RMKEKEARSKFRQIVS----------------------AVQYCHQKRIVHRDLKAENLLLDADM  151 (328)
T ss_dssp             CBHHHHHHHHC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeccCCCHHHEEEcCCC
Confidence            99999998765 7999999999998777                      78888889999999999999986554

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.93  E-value=2.6e-25  Score=156.32  Aligned_cols=128  Identities=25%  Similarity=0.342  Sum_probs=114.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||++.+..   .+|+|.+..   .+....+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   91 (310)
T 3s95_A           15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG   91 (310)
T ss_dssp             EEEEECCSSEEEEEEEETTTCCEEEEEEESC---CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             cceecCCCCEEEEEEEECCCCcEEEEEEecc---CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCC
Confidence            4689999999999999864   499998865   4567788899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        92 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------al~~lH~~~ivH~dlkp~Nil~~~~~  145 (310)
T 3s95_A           92 GTLRGIIKSMDSQYPWSQRVSFAKDIAS----------------------GMAYLHSMNIIHRDLNSHNCLVRENK  145 (310)
T ss_dssp             CBHHHHHHHCCTTSCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSTTSEEECTTS
T ss_pred             CcHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccCCCCCcCeEEECCCC
Confidence            9999999875557999999999998888                      78888889999999999999987654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.93  E-value=2.8e-25  Score=155.36  Aligned_cols=130  Identities=22%  Similarity=0.246  Sum_probs=115.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+|+|.+...........+.+.+|+..+..++||||+++++++...+.++++|||+++
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g   95 (294)
T 4eqm_A           16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG   95 (294)
T ss_dssp             EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence            4689999999999999754   5999998765545566778899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        96 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~Dlkp~Nil~~~~~  148 (294)
T 4eqm_A           96 PTLSEYIESHG-PLSVDTAINFTNQILD----------------------GIKHAHDMRIVHRDIKPQNILIDSNK  148 (294)
T ss_dssp             CBHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEECCCC
Confidence            99999998765 7999999999998777                      78888999999999999999986554

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.93  E-value=3.5e-25  Score=158.18  Aligned_cols=130  Identities=21%  Similarity=0.230  Sum_probs=114.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.++.   .+|+|.+...........+.+.+|..++..+ +||||+++++++...+.++++|||++
T Consensus        14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~   93 (345)
T 3a8x_A           14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN   93 (345)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence            4689999999999999865   4999999876555666677888999999988 89999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        94 gg~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDlkp~NIll~~~g  147 (345)
T 3a8x_A           94 GGDLMFHMQRQR-KLPEEHARFYSAEISL----------------------ALNYLHERGIIYRDLKLDNVLLDSEG  147 (345)
T ss_dssp             SCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCceecCCCHHHEEECCCC
Confidence            999999998765 7999999999998777                      88888999999999999999986543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.93  E-value=2.8e-25  Score=154.90  Aligned_cols=128  Identities=6%  Similarity=-0.080  Sum_probs=110.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+......+....+.+.+|+..+..++||||+++++++...+..+++|||+++
T Consensus        36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g  115 (286)
T 3uqc_A           36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG  115 (286)
T ss_dssp             EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred             EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence            4679999999999999864   5999999876545566678899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.++++.   .....++..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       116 ~~L~~~l~~---~~~~~~~~~i~~ql~~----------------------aL~~lH~~givH~Dikp~NIll~~~g  166 (286)
T 3uqc_A          116 GSLQEVADT---SPSPVGAIRAMQSLAA----------------------AADAAHRAGVALSIDHPSRVRVSIDG  166 (286)
T ss_dssp             EEHHHHHTT---CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCSGGGEEEETTS
T ss_pred             CCHHHHHhc---CCChHHHHHHHHHHHH----------------------HHHHHHHCCCccCCCCcccEEEcCCC
Confidence            999999964   2355667777776666                      88889999999999999999987654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.93  E-value=1.7e-25  Score=162.30  Aligned_cols=130  Identities=20%  Similarity=0.229  Sum_probs=111.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|+.+.   .+|+|++.+...........+..|..++..+ +||||+++++++...+.++++|||++
T Consensus        57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~  136 (396)
T 4dc2_A           57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN  136 (396)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence            4689999999999999865   3999999876544444556678889888887 89999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|..++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|....+
T Consensus       137 gg~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------aL~~LH~~givHrDLKp~NILl~~~g  190 (396)
T 4dc2_A          137 GGDLMFHMQRQR-KLPEEHARFYSAEISL----------------------ALNYLHERGIIYRDLKLDNVLLDSEG  190 (396)
T ss_dssp             TCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEeccCCHHHEEECCCC
Confidence            999999998765 7999999999998777                      88889999999999999999986554

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=4e-25  Score=156.58  Aligned_cols=129  Identities=20%  Similarity=0.233  Sum_probs=113.5

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..      .+|+|.+...  ......+.+.+|+.++..++||||+++++++...+..+++|||
T Consensus        54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  131 (325)
T 3kul_A           54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG--YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY  131 (325)
T ss_dssp             EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEEC
T ss_pred             eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeC
Confidence            4679999999999999852      3999999764  3456678899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus       132 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~L~~LH~~~ivH~Dlkp~NIll~~~~  188 (325)
T 3kul_A          132 MENGSLDTFLRTHDGQFTIMQLVGMLRGVGA----------------------GMRYLSDLGYVHRDLAARNVLVDSNL  188 (325)
T ss_dssp             CTTCBHHHHHHTTTTCSCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCCCcHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeCCCCCcceEEECCCC
Confidence            9999999999876557999999999998888                      88888999999999999999986543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.92  E-value=5.9e-25  Score=157.88  Aligned_cols=128  Identities=21%  Similarity=0.250  Sum_probs=113.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ......+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g  112 (362)
T 2bdw_A           34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG  112 (362)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEEccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence            4679999999999999854   49999998755 3455677899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.
T Consensus       113 g~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------al~~lH~~~ivH~Dlkp~NIll~~~  164 (362)
T 2bdw_A          113 GELFEDIVARE-FYSEADASHCIQQILE----------------------SIAYCHSNGIVHRNLKPENLLLASK  164 (362)
T ss_dssp             CBHHHHHTTCS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCSGGGEEESCS
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeccCchHHEEEecC
Confidence            99999998755 7899999999998777                      7788888999999999999998754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.92  E-value=1.8e-25  Score=161.30  Aligned_cols=129  Identities=22%  Similarity=0.340  Sum_probs=113.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+...  ......+.+.+|+.+++.++||||+++++++...+.++++|||+++
T Consensus       119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  196 (377)
T 3cbl_A          119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG  196 (377)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eeEeccCCCCeEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCC
Confidence            4679999999999999863   4999998754  3455567788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.++++..+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       197 g~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~LH~~~ivHrDlkp~Nil~~~~~  250 (377)
T 3cbl_A          197 GDFLTFLRTEGARLRVKTLLQMVGDAAA----------------------GMEYLESKCCIHRDLAARNCLVTEKN  250 (377)
T ss_dssp             CBHHHHHHHHGGGCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcCCcccCHHHEEEcCCC
Confidence            9999999876657999999999998888                      88889999999999999999987544

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.92  E-value=1.3e-25  Score=159.93  Aligned_cols=130  Identities=21%  Similarity=0.215  Sum_probs=111.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.+...........+.+|..++..++||||+++++++...+.++++|||+++
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g   89 (337)
T 1o6l_A           10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG   89 (337)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4689999999999999864   4999999753211223356778899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus        90 g~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDlkp~NIll~~~g  142 (337)
T 1o6l_A           90 GELFFHLSRER-VFTEERARFYGAEIVS----------------------ALEYLHSRDVVYRDIKLENLMLDKDG  142 (337)
T ss_dssp             CBHHHHHHHHS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCcCCHHHEEECCCC
Confidence            99999998765 7999999999998777                      88889999999999999999986544

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.92  E-value=5.9e-25  Score=152.99  Aligned_cols=128  Identities=22%  Similarity=0.275  Sum_probs=112.2

Q ss_pred             CCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l   71 (157)
                      .+.||+|+||.||+|.+..          .+++|.+...   .....+.+.+|+.++..++||||+++++++...+..++
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   89 (289)
T 4fvq_A           13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENIL   89 (289)
T ss_dssp             EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEE
T ss_pred             eeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEE
Confidence            4679999999999998754          3899998763   34556788999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           72 VTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +|||+++|+|.+++...+..+++..+..++.|++.                      +|.++|+++++|||+|+.|++..
T Consensus        90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~L~~LH~~~ivH~Dlkp~NIll~  147 (289)
T 4fvq_A           90 VQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAA----------------------AMHFLEENTLIHGNVCAKNILLI  147 (289)
T ss_dssp             EEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEEE
T ss_pred             EEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHhhCCeECCCcCcceEEEe
Confidence            99999999999999886645999999999998777                      88888999999999999999986


Q ss_pred             ccc
Q psy697          152 SAE  154 (157)
Q Consensus       152 ~~~  154 (157)
                      ..+
T Consensus       148 ~~~  150 (289)
T 4fvq_A          148 REE  150 (289)
T ss_dssp             ECC
T ss_pred             cCC
Confidence            654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=8e-25  Score=154.88  Aligned_cols=125  Identities=15%  Similarity=0.199  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+...    ......+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus        10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g   85 (321)
T 1tki_A           10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISG   85 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred             eeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCC
Confidence            5689999999999999865   4999998753    24556788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus        86 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------al~~lH~~givH~Dlkp~NIl~~~  137 (321)
T 1tki_A           86 LDIFERINTSAFELNEREIVSYVHQVCE----------------------ALQFLHSHNIGHFDIRPENIIYQT  137 (321)
T ss_dssp             CBHHHHHTSSSCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEESS
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCCCcCCCCHHHEEEcc
Confidence            9999999876557999999999998888                      788888899999999999999875

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.92  E-value=6.9e-25  Score=158.08  Aligned_cols=130  Identities=22%  Similarity=0.294  Sum_probs=113.2

Q ss_pred             CCCccccCceeeEEEEEEe---c---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            1 MGDRIGKGHFGTVYNGNWH---G---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~---~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      +.+.||+|+||.||+|.+.   .   .+|+|.+...  ......+.+.+|+.++..++||||+++++++...+..+++||
T Consensus        49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  126 (373)
T 2qol_A           49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE  126 (373)
T ss_dssp             CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc--cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEe
Confidence            3578999999999999875   1   4999999764  345667789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++...+..+++.++..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus       127 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~Dlkp~NIll~~~~  184 (373)
T 2qol_A          127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIAS----------------------GMKYLSDMGYVHRDLAARNILINSNL  184 (373)
T ss_dssp             CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             CCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeCCCCCcceEEEcCCC
Confidence            99999999999876657999999999998888                      88888889999999999999986543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.92  E-value=1.8e-25  Score=160.14  Aligned_cols=130  Identities=24%  Similarity=0.222  Sum_probs=111.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.++.   .+|+|++.+...........+..|..++..+ +||||+++++++...+.++++|||++
T Consensus        28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~  107 (353)
T 3txo_A           28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN  107 (353)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence            4689999999999999865   4999999764222233456678899999988 79999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus       108 gg~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~givHrDlkp~NILl~~~g  161 (353)
T 3txo_A          108 GGDLMFHIQKSR-RFDEARARFYAAEIIS----------------------ALMFLHDKGIIYRDLKLDNVLLDHEG  161 (353)
T ss_dssp             SCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCcccCCCHHHEEECCCC
Confidence            999999998765 7999999999997777                      88888999999999999999986554

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.92  E-value=9.4e-25  Score=153.76  Aligned_cols=130  Identities=32%  Similarity=0.535  Sum_probs=113.1

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      .+.||+|+||.||+|.+.+ .+|+|++.... ......+.+.+|+.++.+++||||+++++++...+..+++|||+++|+
T Consensus        42 ~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~  120 (309)
T 3p86_A           42 KEKIGAGSFGTVHRAEWHGSDVAVKILMEQD-FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS  120 (309)
T ss_dssp             EEEEEECSSEEEEEEEETTEEEEEEEECCCC-CSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred             eeEeecCCCeEEEEEEECCCcEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence            4679999999999998866 59999997654 455667789999999999999999999999999999999999999999


Q ss_pred             HhHHHhhhc--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc--ccccCCCCccccccccc
Q psy697           81 LYTNIHIYK--EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR--ILARSPSHPLNLSRSAE  154 (157)
Q Consensus        81 L~~~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~--~~~rd~k~~~~~~~~~~  154 (157)
                      |.+++...+  ..+++..+..++.|++.                      +|+++|+++  ++|||+|+.|++.....
T Consensus       121 L~~~l~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~~~ivH~Dikp~NIll~~~~  176 (309)
T 3p86_A          121 LYRLLHKSGAREQLDERRRLSMAYDVAK----------------------GMNYLHNRNPPIVHRNLKSPNLLVDKKY  176 (309)
T ss_dssp             HHHHHHSTTHHHHSCHHHHHHHHHHHHH----------------------HHHHHHTSSSCCCCTTCCGGGEEECTTC
T ss_pred             HHHHHhhcCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHcCCCCEECCCCChhhEEEeCCC
Confidence            999998643  13899999999998888                      777788888  99999999999987653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.92  E-value=1.2e-24  Score=156.61  Aligned_cols=129  Identities=22%  Similarity=0.395  Sum_probs=111.2

Q ss_pred             CCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~   70 (157)
                      ++.||+|+||.||+|.+..          .+|+|.+...  ......+.+.+|+.++..+ +||||+++++++...+.++
T Consensus        86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~  163 (370)
T 2psq_A           86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY  163 (370)
T ss_dssp             EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT--CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCE
T ss_pred             eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC--cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEE
Confidence            4679999999999998742          3999999765  3456677899999999999 8999999999999999999


Q ss_pred             EEEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697           71 IVTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      ++|||+++|+|.+++...+               ..+++..+..++.|++.                      +|+++|+
T Consensus       164 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~  221 (370)
T 2psq_A          164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR----------------------GMEYLAS  221 (370)
T ss_dssp             EEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHH----------------------HHHHHHH
T ss_pred             EEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHH----------------------HHHHHHh
Confidence            9999999999999998643               24788888888887777                      8888999


Q ss_pred             ccccccCCCCccccccccc
Q psy697          136 KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       136 ~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++++|||+|+.|++.....
T Consensus       222 ~~ivHrDlkp~NIll~~~~  240 (370)
T 2psq_A          222 QKCIHRDLAARNVLVTENN  240 (370)
T ss_dssp             TTEECSCCCGGGEEECTTC
T ss_pred             CCeeccccchhhEEECCCC
Confidence            9999999999999986544

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.92  E-value=7.4e-25  Score=161.07  Aligned_cols=128  Identities=18%  Similarity=0.182  Sum_probs=111.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ......+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g   94 (444)
T 3soa_A           16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK-LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG   94 (444)
T ss_dssp             EEEEEEC--CEEEEEEETTTTEEEEEEEEESCS-CHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred             EEEeccCCCeEEEEEEECCCCcEEEEEEEEccc-CCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence            5689999999999998854   49999998754 3445677889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+.+...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+.
T Consensus        95 g~L~~~i~~~~-~~~e~~~~~i~~qil~----------------------aL~~lH~~givHrDlKp~NIll~~~  146 (444)
T 3soa_A           95 GELFEDIVARE-YYSEADASHCIQQILE----------------------AVLHCHQMGVVHRNLKPENLLLASK  146 (444)
T ss_dssp             CBHHHHHHHCS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCSSTTEEESBS
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCCHHHEEEecc
Confidence            99999998765 7999999999998777                      7888888999999999999998753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.92  E-value=1.4e-24  Score=156.16  Aligned_cols=128  Identities=23%  Similarity=0.305  Sum_probs=110.9

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+.+        .+|+|.+...  ........+.+|+.++..++||||+++++++......+++|
T Consensus        76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~  153 (367)
T 3l9p_A           76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL  153 (367)
T ss_dssp             EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEE
Confidence            4679999999999999532        4999999754  34566677889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           74 SKCNGHTLYTNIHIYK------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ||+++|+|.+++...+      ..+++..+..++.|++.                      +|+++|+++++|||+|+.|
T Consensus       154 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrDlkp~N  211 (367)
T 3l9p_A          154 ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC----------------------GCQYLEENHFIHRDIAARN  211 (367)
T ss_dssp             ECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGG
T ss_pred             EeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHH----------------------HHHHHHhCCeeCCCCChhh
Confidence            9999999999998753      24888899999998887                      7888889999999999999


Q ss_pred             cccccc
Q psy697          148 NLSRSA  153 (157)
Q Consensus       148 ~~~~~~  153 (157)
                      ++....
T Consensus       212 Ill~~~  217 (367)
T 3l9p_A          212 CLLTCP  217 (367)
T ss_dssp             EEESCS
T ss_pred             EEEecC
Confidence            998744

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.92  E-value=6.2e-25  Score=157.71  Aligned_cols=130  Identities=16%  Similarity=0.220  Sum_probs=111.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCH---HHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE---KTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ++.||+|+||.||+|....   .+|+|.+........   ...+.+.+|+.++..++||||+++++++...+.++++|||
T Consensus        17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~   96 (361)
T 2yab_A           17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL   96 (361)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence            5689999999999999864   499999987542111   1356788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        97 ~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~----------------------aL~~LH~~givHrDlkp~NIll~~~~  152 (361)
T 2yab_A           97 VSGGELFDFLAQKE-SLSEEEATSFIKQILD----------------------GVNYLHTKKIAHFDLKPENIMLLDKN  152 (361)
T ss_dssp             CCSCBHHHHHTTCS-CCBHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEEeCCC
Confidence            99999999998755 7999999999998777                      78888899999999999999876543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.92  E-value=1e-25  Score=165.26  Aligned_cols=131  Identities=15%  Similarity=0.122  Sum_probs=110.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.++.   .+|+|++.+...........+.+|..++..++||||+++++++...+.++++|||+++
T Consensus        79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g  158 (437)
T 4aw2_A           79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG  158 (437)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence            4689999999999999865   3999999753211111123377899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+..+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|.....
T Consensus       159 g~L~~~l~~~~~~l~e~~~~~~~~qi~~----------------------aL~~LH~~giiHrDLKp~NILl~~~g  212 (437)
T 4aw2_A          159 GDLLTLLSKFEDRLPEEMARFYLAEMVI----------------------AIDSVHQLHYVHRDIKPDNILMDMNG  212 (437)
T ss_dssp             CBHHHHHHTTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CcHHHHHHHccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEecccCHHHeeEcCCC
Confidence            9999999875457999999999997777                      88889999999999999999987554

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.92  E-value=1.7e-25  Score=161.71  Aligned_cols=130  Identities=18%  Similarity=0.143  Sum_probs=111.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+...........+.+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus        20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g   99 (384)
T 4fr4_A           20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG   99 (384)
T ss_dssp             EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence            4689999999999999865   4999998753211223356788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus       100 g~L~~~l~~~~-~l~~~~~~~~~~qi~~----------------------aL~~LH~~givHrDlkp~NIll~~~g  152 (384)
T 4fr4_A          100 GDLRYHLQQNV-HFKEETVKLFICELVM----------------------ALDYLQNQRIIHRDMKPDNILLDEHG  152 (384)
T ss_dssp             EEHHHHHHTTC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCceeccCcHHHeEECCCC
Confidence            99999998755 7999999999998777                      88889999999999999999986554

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.92  E-value=1.5e-24  Score=156.93  Aligned_cols=130  Identities=17%  Similarity=0.113  Sum_probs=114.2

Q ss_pred             CCccccC--ceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKG--HFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G--~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+.||+|  +||.||+|.+..   .+|+|.+.... ......+.+.+|+.+++.++||||+++++++...+.++++|||+
T Consensus        30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  108 (389)
T 3gni_B           30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-CSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM  108 (389)
T ss_dssp             EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EecccCCcCCceEEEEEEEcCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEcc
Confidence            5689999  999999999864   49999998754 44566788889999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|+|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~LH~~~ivHrDlkp~NIll~~~~  165 (389)
T 3gni_B          109 AYGSAKDLICTHFMDGMNELAIAYILQGVLK----------------------ALDYIHHMGYVHRSVKASHILISVDG  165 (389)
T ss_dssp             TTCBHHHHHHHTCTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CCCCHHHHHhhhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            9999999998752 36899999999998777                      88888999999999999999987544

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.92  E-value=2e-24  Score=153.54  Aligned_cols=129  Identities=18%  Similarity=0.281  Sum_probs=112.1

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+.+        .+|+|.+...  ......+.+.+|+.++..++||||+++++++...+..+++|
T Consensus        52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  129 (343)
T 1luf_A           52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF  129 (343)
T ss_dssp             EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEE
Confidence            4679999999999999863        4999999765  34556778999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc-----------------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q psy697           74 SKCNGHTLYTNIHIYK-----------------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSL  130 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~-----------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l  130 (157)
                      ||+++|+|.+++....                       ..+++.++..++.|++.                      +|
T Consensus       130 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------~l  187 (343)
T 1luf_A          130 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAA----------------------GM  187 (343)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHH----------------------HH
T ss_pred             ecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHH----------------------HH
Confidence            9999999999998642                       36888899999888777                      88


Q ss_pred             hccccccccccCCCCccccccccc
Q psy697          131 EKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       131 ~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+++++|||+|+.|++..+..
T Consensus       188 ~~LH~~~ivH~Dlkp~NIl~~~~~  211 (343)
T 1luf_A          188 AYLSERKFVHRDLATRNCLVGENM  211 (343)
T ss_dssp             HHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             HHHHhCCeecCCCCcceEEECCCC
Confidence            888999999999999999987543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.92  E-value=1e-24  Score=152.78  Aligned_cols=127  Identities=20%  Similarity=0.256  Sum_probs=109.9

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+.||+|+||.||+|.+..   .+|+|.+....   ....+.+.+|+.++..++||||+++++++...+..+++|||++
T Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  100 (297)
T 3fxz_A           24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (297)
T ss_dssp             CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG---CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             eeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc---ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence            35789999999999998744   59999987643   2235668899999999999999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       101 ~~~L~~~~~~~--~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~Dlkp~Nil~~~~~  153 (297)
T 3fxz_A          101 GGSLTDVVTET--CMDEGQIAAVCRECLQ----------------------ALEFLHSNQVIHRDIKSDNILLGMDG  153 (297)
T ss_dssp             TCBHHHHHHHS--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CCCHHHHHhhc--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCceeCCCCHHHEEECCCC
Confidence            99999999864  6899999999987777                      88888999999999999999986544

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.92  E-value=2.9e-25  Score=156.97  Aligned_cols=130  Identities=18%  Similarity=0.175  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+...........+.+.+|..++..++||||+++++++.....++++|||+++
T Consensus        11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g   90 (318)
T 1fot_A           11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG   90 (318)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence            4689999999999999854   4999999753211112356678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        91 g~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDlkp~NIll~~~g  143 (318)
T 1fot_A           91 GELFSLLRKSQ-RFPNPVAKFYAAEVCL----------------------ALEYLHSKDIIYRDLKPENILLDKNG  143 (318)
T ss_dssp             CBHHHHHHHTS-SCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECCCCCGGGEEECTTS
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCChheEEEcCCC
Confidence            99999998755 7999999999887777                      88889999999999999999986543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.92  E-value=2.1e-25  Score=162.60  Aligned_cols=131  Identities=15%  Similarity=0.090  Sum_probs=111.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++..+.   .+|+|++.+...........+.+|..++..++||||+++++++...+.++++|||+++
T Consensus        66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g  145 (412)
T 2vd5_A           66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG  145 (412)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence            4689999999999999854   4999999753211122234577899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+..+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus       146 g~L~~~l~~~~~~l~~~~~~~~~~qi~~----------------------aL~~LH~~giiHrDLKp~NILld~~g  199 (412)
T 2vd5_A          146 GDLLTLLSKFGERIPAEMARFYLAEIVM----------------------AIDSVHRLGYVHRDIKPDNILLDRCG  199 (412)
T ss_dssp             CBHHHHHHHHSSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecccCHHHeeecCCC
Confidence            9999999876557999999999997777                      88889999999999999999987643

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.92  E-value=1.6e-24  Score=156.85  Aligned_cols=127  Identities=14%  Similarity=0.168  Sum_probs=111.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+...   .......+.+|+.++..++||||+++++++.....++++|||+++
T Consensus        56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~g  132 (387)
T 1kob_A           56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG  132 (387)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             EEEEecCCCEEEEEEEECCCCCEEEEEEeccc---chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCC
Confidence            4679999999999999865   4999999763   345567789999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.
T Consensus       133 g~L~~~l~~~~~~l~~~~~~~i~~qi~~----------------------aL~~LH~~givHrDlkp~NIll~~~  185 (387)
T 1kob_A          133 GELFDRIAAEDYKMSEAEVINYMRQACE----------------------GLKHMHEHSIVHLDIKPENIMCETK  185 (387)
T ss_dssp             CBHHHHTTCTTCCBCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEESST
T ss_pred             CcHHHHHHhhcCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeecccchHHeEEecC
Confidence            9999999876557999999999998877                      8888899999999999999998643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.92  E-value=3.5e-25  Score=158.42  Aligned_cols=130  Identities=18%  Similarity=0.168  Sum_probs=111.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+...........+.+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus        46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g  125 (350)
T 1rdq_E           46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG  125 (350)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence            4689999999999999864   4999999753211123356788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus       126 g~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDlkp~NIll~~~g  178 (350)
T 1rdq_E          126 GEMFSHLRRIG-RFSEPHARFYAAQIVL----------------------TFEYLHSLDLIYRDLKPENLLIDQQG  178 (350)
T ss_dssp             CBHHHHHHHHC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccccCccceEEECCCC
Confidence            99999998765 7999999999997777                      88889999999999999999986543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.92  E-value=3.7e-25  Score=158.02  Aligned_cols=130  Identities=23%  Similarity=0.254  Sum_probs=109.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.++.   .+|+|.+.............+..|..++..+ +||||+++++++...+.++++|||++
T Consensus        22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~  101 (345)
T 1xjd_A           22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN  101 (345)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence            4689999999999999865   4999999763211112345677888888877 99999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       102 gg~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDlkp~NIll~~~g  155 (345)
T 1xjd_A          102 GGDLMYHIQSCH-KFDLSRATFYAAEIIL----------------------GLQFLHSKGIVYRDLKLDNILLDKDG  155 (345)
T ss_dssp             TCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeCCCChhhEEECCCC
Confidence            999999998755 7999999999997777                      88888999999999999999986543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.92  E-value=1.6e-24  Score=149.35  Aligned_cols=130  Identities=21%  Similarity=0.354  Sum_probs=112.7

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+.+ .+|+|.+.... .+....+.+.+|+.++..++||||+++++++...  +..+++|||+++
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   93 (271)
T 3kmu_A           15 LTKLNENHSGELWKGRWQGNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY   93 (271)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred             HHHhcCCCcceEEEEEECCeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence            4679999999999999976 59999998754 4556677899999999999999999999999887  788999999999


Q ss_pred             CCHhHHHhhhcc-cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc--ccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKE-KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR--ILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~--~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+. .+++..+..++.|++.                      +|+++|+++  ++|||+|+.|++....+
T Consensus        94 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~~~i~H~dikp~Nil~~~~~  150 (271)
T 3kmu_A           94 GSLYNVLHEGTNFVVDQSQAVKFALDMAR----------------------GMAFLHTLEPLIPRHALNSRSVMIDEDM  150 (271)
T ss_dssp             CBHHHHHHSCSSCCCCHHHHHHHHHHHHH----------------------HHHHHTTSSSCCTTCCCSGGGEEECTTS
T ss_pred             CcHHHHHhhcccCCCCHHHHHHHHHHHHH----------------------HHHHHhcCCCceecCCCccceEEEcCCc
Confidence            999999987542 4899999999998888                      777788778  99999999999987653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=1.9e-24  Score=149.17  Aligned_cols=127  Identities=21%  Similarity=0.324  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|.+..  .+|+|.+....    ...+.+.+|+.++..++||||+++++++...+..+++|||++++
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   90 (269)
T 4hcu_A           15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG   90 (269)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEEECTTS----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             eheecCCCccEEEEEEecCCCeEEEEEecccc----cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCC
Confidence            4689999999999999854  59999998643    22356889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++......+++..+..++.|++.                      +++++|+++++|||+|+.|++....+
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lH~~~i~H~dikp~Nil~~~~~  143 (269)
T 4hcu_A           91 CLSDYLRTQRGLFAAETLLGMCLDVCE----------------------GMAYLEEACVIHRDLAARNCLVGENQ  143 (269)
T ss_dssp             BHHHHHHTTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECGGG
T ss_pred             cHHHHHHhcCcccCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCcchheEEEcCCC
Confidence            999999876557899999999998777                      78888889999999999999986544

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.92  E-value=1.1e-24  Score=152.20  Aligned_cols=128  Identities=25%  Similarity=0.370  Sum_probs=110.3

Q ss_pred             CCccccCceeeEEEEEEe-------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH-------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~-------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv   72 (157)
                      .+.||+|+||.||+|.+.       ..+|+|.+..   .+....+.+.+|+.++..++||||+++++++...  ..++++
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   91 (295)
T 3ugc_A           15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI   91 (295)
T ss_dssp             EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC---CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEE
T ss_pred             hheeeccCCEEEEEEEEecccCCCCcEEEEEEccc---CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEE
Confidence            568999999999999852       1499999976   4566678899999999999999999999998653  568999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++|+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~Dikp~Nil~~~  149 (295)
T 3ugc_A           92 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----------------------GMEYLGTKRYIHRDLATRNILVEN  149 (295)
T ss_dssp             EECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEEEE
T ss_pred             EEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHH----------------------HHHHHhcCCcccCCCCHhhEEEcC
Confidence            9999999999999886656999999999998887                      778888889999999999999865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       150 ~~  151 (295)
T 3ugc_A          150 EN  151 (295)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.92  E-value=3e-24  Score=154.74  Aligned_cols=124  Identities=19%  Similarity=0.238  Sum_probs=105.0

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||+|....   .+|+|++...   .....+.+.+|+.++..++||||+++++++...+..+++|||++++
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EECC-----CEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             eEEecCcCEEEEEEEEcCCCcEEEEEEEccc---ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            469999999999999854   5999999873   3456778999999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..
T Consensus       172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~Dlkp~NIll~  221 (373)
T 2x4f_A          172 ELFDRIIDESYNLTELDTILFMKQICE----------------------GIRHMHQMYILHLDLKPENILCV  221 (373)
T ss_dssp             EEHHHHHHTGGGCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEEE
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccccCCHHHEEEe
Confidence            999998776557999999999887777                      88889999999999999999873

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.91  E-value=3.1e-24  Score=151.70  Aligned_cols=129  Identities=21%  Similarity=0.247  Sum_probs=105.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC-----------
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP-----------   67 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----------   67 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+....  .....+.+.+|+.+++.++||||+++++++...+           
T Consensus        11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~   88 (332)
T 3qd2_B           11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEI   88 (332)
T ss_dssp             EEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-
T ss_pred             eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhh
Confidence            4689999999999999864   49999998653  3445678999999999999999999999886543           


Q ss_pred             ----------------------------------------------ceEEEEecCCCCCHhHHHhhhc--ccCCHHHHHH
Q psy697           68 ----------------------------------------------HLAIVTSKCNGHTLYTNIHIYK--EKFALNKMST   99 (157)
Q Consensus        68 ----------------------------------------------~~~lv~e~~~~g~L~~~i~~~~--~~~~~~~~~~   99 (157)
                                                                    ..+++|||+++++|.+++....  ...++..+..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  168 (332)
T 3qd2_B           89 WLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLH  168 (332)
T ss_dssp             -------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHH
T ss_pred             hhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHH
Confidence                                                          2899999999999999998743  2355566778


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697          100 VGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       100 ~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       169 i~~qi~~----------------------aL~~LH~~~ivH~Dlkp~NIll~~~~  201 (332)
T 3qd2_B          169 IFIQIAE----------------------AVEFLHSKGLMHRDLKPSNIFFTMDD  201 (332)
T ss_dssp             HHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             HHHHHHH----------------------HHHHHHhCCeeecCCCcccEEEeCCC
Confidence            8887777                      88889999999999999999987544

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.91  E-value=2.5e-24  Score=152.57  Aligned_cols=130  Identities=14%  Similarity=0.183  Sum_probs=111.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCC---HHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDD---EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|....   .+|+|.+.......   ....+.+.+|+.++..++||||+++++++......+++|||
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   95 (326)
T 2y0a_A           16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL   95 (326)
T ss_dssp             EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence            4679999999999999864   49999997653211   11356788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.+++...+ .+++..+..++.|++.                      +|.++|+++++|||+|+.|++....+
T Consensus        96 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------al~~lH~~~ivH~Dlkp~NIll~~~~  151 (326)
T 2y0a_A           96 VAGGELFDFLAEKE-SLTEEEATEFLKQILN----------------------GVYYLHSLQIAHFDLKPENIMLLDRN  151 (326)
T ss_dssp             CCSCBHHHHHTTSS-CCBHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEESCSS
T ss_pred             CCCCCHHHHHHhcC-CcCHHHHHHHHHHHHH----------------------HHHHHHHCCeEcCCCCHHHEEEecCC
Confidence            99999999998654 7999999999998777                      78888889999999999999886543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.91  E-value=8e-25  Score=154.97  Aligned_cols=128  Identities=21%  Similarity=0.199  Sum_probs=108.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|++....  .....+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~   89 (323)
T 3tki_A           12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG   89 (323)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             eeEEecCCCEEEEEEEECCCCcEEEEEEEEccc--ccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCC
Confidence            5689999999999999864   49999997642  223346788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++.... .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        90 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------aL~~LH~~givH~Dlkp~NIll~~~~  142 (323)
T 3tki_A           90 GELFDRIEPDI-GMPEPDAQRFFHQLMA----------------------GVVYLHGIGITHRDIKPENLLLDERD  142 (323)
T ss_dssp             EEGGGGSBTTT-BCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CcHHHHHhhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccccchHHEEEeCCC
Confidence            99999998755 6999999999998777                      78888889999999999999987644

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.91  E-value=4.8e-24  Score=151.09  Aligned_cols=124  Identities=18%  Similarity=0.237  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+...      ....+.+|+..+..+. ||||+++++++......+++|||++
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~   89 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN   89 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence            3689999999999999864   4999999752      3456778999999996 9999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        90 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------~l~~LH~~~ivH~Dlkp~NIll~~~~  143 (325)
T 3kn6_A           90 GGELFERIKKKK-HFSETEASYIMRKLVS----------------------AVSHMHDVGVVHRDLKPENLLFTDEN  143 (325)
T ss_dssp             SCBHHHHHHHCS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEEEC--
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCeecCCCHHHEEEecCC
Confidence            999999998765 7999999999998777                      88889999999999999999986543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.91  E-value=4.9e-24  Score=153.99  Aligned_cols=129  Identities=23%  Similarity=0.403  Sum_probs=112.3

Q ss_pred             CCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~   70 (157)
                      ++.||+|+||.||+|.+..          .+|+|.+...  ........+.+|+.++..+ +||||+++++++...+..+
T Consensus        74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~  151 (382)
T 3tt0_A           74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY  151 (382)
T ss_dssp             EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceE
Confidence            4679999999999999742          4999999765  4456678899999999999 9999999999999999999


Q ss_pred             EEEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697           71 IVTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      ++|||+++|+|.+++...+               ..+++..+..++.|++.                      +|+++|+
T Consensus       152 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------aL~~LH~  209 (382)
T 3tt0_A          152 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR----------------------GMEYLAS  209 (382)
T ss_dssp             EEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHH----------------------HHHHHHH
T ss_pred             EEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHH----------------------HHHHHHh
Confidence            9999999999999998753               24899999999998888                      7888888


Q ss_pred             ccccccCCCCccccccccc
Q psy697          136 KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       136 ~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++++|||+|+.|++.....
T Consensus       210 ~~ivH~Dlkp~NIll~~~~  228 (382)
T 3tt0_A          210 KKCIHRDLAARNVLVTEDN  228 (382)
T ss_dssp             TTCCCSCCCGGGEEECTTC
T ss_pred             CCEecCCCCcceEEEcCCC
Confidence            9999999999999987554

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.91  E-value=7.6e-25  Score=154.17  Aligned_cols=130  Identities=21%  Similarity=0.192  Sum_probs=112.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc----eEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH----LAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+......+......+.+|+.++..++||||+++++++.....    ++++||
T Consensus        17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e   96 (311)
T 3ork_A           17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME   96 (311)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence            4689999999999999754   499999987654556667788999999999999999999999876543    499999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        97 ~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~dlkp~Nil~~~~~  153 (311)
T 3ork_A           97 YVDGVTLRDIVHTEG-PMTPKRAIEVIADACQ----------------------ALNFSHQNGIIHRDVKPANIMISATN  153 (311)
T ss_dssp             CCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEEETTS
T ss_pred             cCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCCcCCCCHHHEEEcCCC
Confidence            999999999998765 7999999999998777                      88888999999999999999986544

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.91  E-value=2e-24  Score=160.66  Aligned_cols=128  Identities=19%  Similarity=0.193  Sum_probs=106.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .+|+|++.... ........+.+|+.+++.++||||+++++++...+.++++||||++
T Consensus        42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  120 (494)
T 3lij_A           42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG  120 (494)
T ss_dssp             EEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             eeEEecCCCEEEEEEEECCCCcEEEEEEEeccc-cCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence            4689999999999999864   49999998654 2233356788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+.+.... .+++..+..++.|++.                      +|.++|+++++|||+|+.|++..+.
T Consensus       121 g~L~~~~~~~~-~~~~~~~~~i~~qi~~----------------------~l~~lH~~~ivH~Dlkp~Nil~~~~  172 (494)
T 3lij_A          121 GELFDEIIHRM-KFNEVDAAVIIKQVLS----------------------GVTYLHKHNIVHRDLKPENLLLESK  172 (494)
T ss_dssp             CBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEESCS
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCceeccCChhhEEEeCC
Confidence            99999988765 7999999999997777                      7888888999999999999998664

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=4.7e-24  Score=151.51  Aligned_cols=129  Identities=22%  Similarity=0.268  Sum_probs=112.8

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..       .+|+|.+...  ........+.+|+.++..++||||+++++++...+..+++||
T Consensus        49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  126 (333)
T 1mqb_A           49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG--YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE  126 (333)
T ss_dssp             EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEe
Confidence            3679999999999998754       2999999764  345567788999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       127 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~Dikp~NIl~~~~~  184 (333)
T 1mqb_A          127 YMENGALDKFLREKDGEFSVLQLVGMLRGIAA----------------------GMKYLANMNYVHRDLAARNILVNSNL  184 (333)
T ss_dssp             CCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             CCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeCCCCChheEEECCCC
Confidence            99999999999876557999999999998887                      78888889999999999999987543

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.91  E-value=8.7e-25  Score=157.55  Aligned_cols=130  Identities=23%  Similarity=0.202  Sum_probs=102.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHH-HHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTT-FRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|+++.   .+|+|++.+...........+..|..+ +..++||||+++++++...+.++++|||++
T Consensus        43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~  122 (373)
T 2r5t_A           43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN  122 (373)
T ss_dssp             EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence            4689999999999999865   499999987654334445556666665 466899999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       123 gg~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~givHrDlkp~NIll~~~g  176 (373)
T 2r5t_A          123 GGELFYHLQRER-CFLEPRARFYAAEIAS----------------------ALGYLHSLNIVYRDLKPENILLDSQG  176 (373)
T ss_dssp             SCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCceecCCCHHHEEECCCC
Confidence            999999998765 7899999999887777                      88889999999999999999986544

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.91  E-value=2e-25  Score=162.58  Aligned_cols=129  Identities=16%  Similarity=0.087  Sum_probs=107.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.++.   .+|+|++.+...........+.+|..++..++||||+++++++...+.++++|||+++
T Consensus        74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g  153 (410)
T 3v8s_A           74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG  153 (410)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence            4689999999999999865   4999998652111111223467899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...  .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus       154 g~L~~~l~~~--~~~e~~~~~~~~qi~~----------------------aL~~LH~~givHrDLKp~NILl~~~g  205 (410)
T 3v8s_A          154 GDLVNLMSNY--DVPEKWARFYTAEVVL----------------------ALDAIHSMGFIHRDVKPDNMLLDKSG  205 (410)
T ss_dssp             EEHHHHHHHC--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CcHHHHHHcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeccCCHHHeeECCCC
Confidence            9999999753  6899999999887777                      88889999999999999999986543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.91  E-value=2.7e-24  Score=154.38  Aligned_cols=126  Identities=25%  Similarity=0.271  Sum_probs=109.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+.....    ....+.+|+.+++.++||||+++++++...+.++++|||+++
T Consensus        25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  100 (361)
T 3uc3_A           25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASG  100 (361)
T ss_dssp             EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT----SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc----ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCC
Confidence            4689999999999999864   499999976432    234577899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       101 ~~L~~~l~~~~-~~~~~~~~~i~~ql~~----------------------~L~~LH~~~ivH~Dlkp~Nill~~~~  153 (361)
T 3uc3_A          101 GELYERICNAG-RFSEDEARFFFQQLLS----------------------GVSYCHSMQICHRDLKLENTLLDGSP  153 (361)
T ss_dssp             CBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCSCCCCGGGEEECSSS
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            99999998755 7999999999998777                      78888889999999999999986543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.91  E-value=2.6e-24  Score=148.33  Aligned_cols=127  Identities=24%  Similarity=0.351  Sum_probs=111.3

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++.+..  .+|+|.+....    ...+.+.+|+.++..++||||+++++++...+..+++|||++++
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   88 (268)
T 3sxs_A           13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS----MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNG   88 (268)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECBTT----BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             eeeeccCCCceEEEEEecCceeEEEEEeccCC----CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCC
Confidence            4679999999999998866  49999997643    22456889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++...+..+++..+..++.|++.                      +|.++|+++++|||+|+.|++.....
T Consensus        89 ~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~dikp~Nil~~~~~  141 (268)
T 3sxs_A           89 CLLNYLRSHGKGLEPSQLLEMCYDVCE----------------------GMAFLESHQFIHRDLAARNCLVDRDL  141 (268)
T ss_dssp             BHHHHHHHHGGGCCHHHHHHHHHHHHH----------------------HHHHHHHTTEEESSCSGGGEEECTTC
T ss_pred             cHHHHHHHcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCcCcceEEECCCC
Confidence            999999886656999999999998877                      78888899999999999999986554

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.91  E-value=8.4e-24  Score=148.89  Aligned_cols=127  Identities=21%  Similarity=0.222  Sum_probs=110.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|....   .+|+|.+....   ....+.+.+|+.++.++ +||||+++++++...+.++++|||++
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   94 (316)
T 2ac3_A           18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMR   94 (316)
T ss_dssp             CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             CceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCC
Confidence            3679999999999998754   59999997642   23456788999999885 89999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        95 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------~l~~lH~~~ivH~dlkp~Nil~~~~~  148 (316)
T 2ac3_A           95 GGSILSHIHKRR-HFNELEASVVVQDVAS----------------------ALDFLHNKGIAHRDLKPENILCEHPN  148 (316)
T ss_dssp             TCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEESCSS
T ss_pred             CCcHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCceeCCCCHHHEEEccCC
Confidence            999999998765 7899999999887777                      78888889999999999999987654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.91  E-value=3.6e-24  Score=159.65  Aligned_cols=130  Identities=22%  Similarity=0.268  Sum_probs=108.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCH----------HHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE----------KTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH   68 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~   68 (157)
                      ++.||+|+||.||+|....   .+|+|.+........          ...+.+.+|+.++..++||||+++++++.....
T Consensus        41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  120 (504)
T 3q5i_A           41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY  120 (504)
T ss_dssp             EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            4689999999999999865   499999976532211          235678899999999999999999999999999


Q ss_pred             eEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccc
Q psy697           69 LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLN  148 (157)
Q Consensus        69 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~  148 (157)
                      ++++||||++|+|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|+
T Consensus       121 ~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------~l~~lH~~~ivH~Dlkp~Ni  177 (504)
T 3q5i_A          121 FYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILS----------------------GICYLHKHNIVHRDIKPENI  177 (504)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGE
T ss_pred             EEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeCCCcHHHE
Confidence            999999999999999998765 7999999999998777                      78888889999999999999


Q ss_pred             cccccc
Q psy697          149 LSRSAE  154 (157)
Q Consensus       149 ~~~~~~  154 (157)
                      +....+
T Consensus       178 l~~~~~  183 (504)
T 3q5i_A          178 LLENKN  183 (504)
T ss_dssp             EESSTT
T ss_pred             EEecCC
Confidence            987654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.91  E-value=1.1e-24  Score=155.74  Aligned_cols=131  Identities=23%  Similarity=0.204  Sum_probs=109.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCC--CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL--DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|.+..   .+|+|++.....  ......+.+.+|+.++..++||||+++++++...+.++++|||+
T Consensus        29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~  108 (351)
T 3c0i_A           29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM  108 (351)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence            4689999999999999854   499999864210  11113567889999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++++|.+.+....   ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.
T Consensus       109 ~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~----------------------al~~lH~~~ivHrDlkp~NIl~~~~  166 (351)
T 3c0i_A          109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILE----------------------ALRYCHDNNIIHRDVKPHCVLLASK  166 (351)
T ss_dssp             SSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECSS
T ss_pred             CCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCceeccCChHHeEEecC
Confidence            9999998886542   24899999999998777                      7888888999999999999998764


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       167 ~  167 (351)
T 3c0i_A          167 E  167 (351)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.91  E-value=3.9e-24  Score=148.49  Aligned_cols=127  Identities=24%  Similarity=0.423  Sum_probs=108.1

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++.+..  .+|+|.+....    ...+.+.+|+.++..++||||+++++++...+..+++|||++++
T Consensus        29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  104 (283)
T 3gen_A           29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS----MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG  104 (283)
T ss_dssp             EEECC---CEEEEEEEETTTEEEEEEEECTTS----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTC
T ss_pred             HhhcCCCCCceEEEEEEcCCCeEEEEEecCCC----CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCC
Confidence            4689999999999998866  49999998643    22356889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++...+..+++..+..++.|++.                      +|.++|+++++|||+|+.|++.....
T Consensus       105 ~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~dikp~Nili~~~~  157 (283)
T 3gen_A          105 CLLNYLREMRHRFQTQQLLEMCKDVCE----------------------AMEYLESKQFLHRDLAARNCLVNDQG  157 (283)
T ss_dssp             BHHHHHHCGGGCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSSCSGGGEEECTTS
T ss_pred             cHHHHHHHhccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccCCCCccceEEEcCCC
Confidence            999999875557999999999998777                      78888889999999999999986543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.91  E-value=2.4e-24  Score=150.16  Aligned_cols=129  Identities=42%  Similarity=0.736  Sum_probs=110.5

Q ss_pred             CCccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            2 GDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      .+.||+|+||.||++.+.+.+|+|.+.... ......+.+.+|+.+++.++|||+++++++. ..+..+++|||+++++|
T Consensus        29 ~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L  106 (289)
T 3og7_A           29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL  106 (289)
T ss_dssp             EEEEEECSSEEEEEEESSSEEEEEEESCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEH
T ss_pred             eeEecCCCCeEEEEEEEcCceEEEEEeccC-CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcH
Confidence            468999999999999988889999998765 4566778899999999999999999999954 55668999999999999


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+++...+..+++..+..++.|++.                      +|.++|+++++|||+|+.|++....+
T Consensus       107 ~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~L~~lH~~~i~H~Dlkp~Nil~~~~~  157 (289)
T 3og7_A          107 YHHLHASETKFEMKKLIDIARQTAR----------------------GMDYLHAKSIIHRDLKSNNIFLHEDN  157 (289)
T ss_dssp             HHHHTTC---CCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEEETTT
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccccCccceEEECCCC
Confidence            9999766557999999999998777                      78888888999999999999986544

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.91  E-value=8.6e-25  Score=156.56  Aligned_cols=130  Identities=22%  Similarity=0.191  Sum_probs=110.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|....   .+|+|++.............+..|..++..+ +||||+++++++...+.++++|||++
T Consensus        25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~  104 (353)
T 2i0e_A           25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN  104 (353)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence            4679999999999999865   4999999764211122355677889999887 89999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       105 gg~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~givHrDlkp~NIll~~~g  158 (353)
T 2i0e_A          105 GGDLMYHIQQVG-RFKEPHAVFYAAEIAI----------------------GLFFLQSKGIIYRDLKLDNVMLDSEG  158 (353)
T ss_dssp             SCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEeccCCHHHEEEcCCC
Confidence            999999998765 7999999999998777                      88889999999999999999986543

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.91  E-value=2.6e-24  Score=159.60  Aligned_cols=128  Identities=22%  Similarity=0.252  Sum_probs=112.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|++.............+.+|+.++..++||||+++++++...+.++++|||+.+
T Consensus        31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  110 (484)
T 3nyv_A           31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG  110 (484)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence            4679999999999999864   4999999775534345577889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+.+...+ .+++..+..++.|++.                      +|.++|+++++|||+|+.|++..+
T Consensus       111 ~~L~~~~~~~~-~~~~~~~~~i~~qi~~----------------------~l~~lH~~~ivH~Dlkp~Nil~~~  161 (484)
T 3nyv_A          111 GELFDEIISRK-RFSEVDAARIIRQVLS----------------------GITYMHKNKIVHRDLKPENLLLES  161 (484)
T ss_dssp             CBHHHHHHTCS-CCBHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEESS
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeCCCCHHHEEEec
Confidence            99999998755 7999999999998777                      788888899999999999999853

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.91  E-value=3.6e-24  Score=150.86  Aligned_cols=129  Identities=20%  Similarity=0.240  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|.+..  .+|+|.+.... .+......+.+|+.++..++||||+++++++...+.++++|||+++ 
T Consensus        26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-  103 (311)
T 3niz_A           26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-  103 (311)
T ss_dssp             EEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-
T ss_pred             hhhccCCCCeEEEEEEECCCCEEEEEEEeccc-ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-
Confidence            4689999999999999854  49999997643 3334457788999999999999999999999999999999999974 


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+.+...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       104 ~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~LH~~~ivH~Dikp~NIl~~~~~  156 (311)
T 3niz_A          104 DLKKVLDENKTGLQDSQIKIYLYQLLR----------------------GVAHCHQHRILHRDLKPQNLLINSDG  156 (311)
T ss_dssp             EHHHHHHTCTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             CHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCchHhEEECCCC
Confidence            888888776556999999999997777                      88889999999999999999987654

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.91  E-value=7.6e-24  Score=150.53  Aligned_cols=130  Identities=18%  Similarity=0.201  Sum_probs=115.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||++.+..   .+|+|.+...........+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  125 (335)
T 2owb_A           46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR  125 (335)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence            4679999999999999865   4999999876545667788899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       126 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~dlkp~NIl~~~~~  178 (335)
T 2owb_A          126 RSLLELHKRRK-ALTEPEARYYLRQIVL----------------------GCQYLHRNRVIHRDLKLGNLFLNEDL  178 (335)
T ss_dssp             CBHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             CCHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCEecCCCchhEEEcCCC
Confidence            99999988755 7999999999998777                      78888999999999999999987653

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.91  E-value=7.4e-25  Score=162.22  Aligned_cols=130  Identities=20%  Similarity=0.288  Sum_probs=111.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .+|+|++.............+.+|+.+++.++||||+++++++...+.++++|||+++
T Consensus        21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g  100 (476)
T 2y94_A           21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG  100 (476)
T ss_dssp             EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence            5689999999999999854   5999999753211112356788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus       101 g~L~~~l~~~~-~l~~~~~~~i~~qi~~----------------------aL~~LH~~givHrDLkp~NIll~~~~  153 (476)
T 2y94_A          101 GELFDYICKNG-RLDEKESRRLFQQILS----------------------GVDYCHRHMVVHRDLKPENVLLDAHM  153 (476)
T ss_dssp             EEHHHHTTSSS-SCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECSCCSGGGEEECTTC
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCCcccccHHHEEEecCC
Confidence            99999998654 7999999999998877                      77788888999999999999987654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.91  E-value=8.4e-24  Score=146.72  Aligned_cols=129  Identities=18%  Similarity=0.200  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ........+.+|+..+..+ +||||+++++++...+..+++|||++
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   94 (289)
T 1x8b_A           16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL-AGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCN   94 (289)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECCC-TTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             hhhhcCCCceEEEEEEEcCCCceEEEEEecccc-cccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecC
Confidence            4689999999999999854   59999998754 3344567788899999999 99999999999999999999999999


Q ss_pred             CCCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           78 GHTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        78 ~g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++|.+++....   ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus        95 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~----------------------al~~lH~~~ivH~Dikp~NIl~~~~  151 (289)
T 1x8b_A           95 GGSLADAISENYRIMSYFKEAELKDLLLQVGR----------------------GLRYIHSMSLVHMDIKPSNIFISRT  151 (289)
T ss_dssp             TCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEEC--
T ss_pred             CCcHHHHHHhhcccccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeecCCCHHHEEEcCC
Confidence            999999998642   36899999999998888                      7888888999999999999998743

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.91  E-value=9.8e-24  Score=147.26  Aligned_cols=130  Identities=18%  Similarity=0.201  Sum_probs=114.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+|+|.+...........+.+.+|+.+++.++||||+++++++...+..+++|||+++
T Consensus        20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   99 (294)
T 2rku_A           20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR   99 (294)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence            4679999999999999865   4999999876545566778899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+++.|++..+..
T Consensus       100 ~~L~~~~~~~~-~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~~~  152 (294)
T 2rku_A          100 RSLLELHKRRK-ALTEPEARYYLRQIVL----------------------GCQYLHRNRVIHRDLKLGNLFLNEDL  152 (294)
T ss_dssp             CBHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCChHhEEEcCCC
Confidence            99999988755 7999999999998777                      78888899999999999999987643

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.91  E-value=6.7e-24  Score=149.13  Aligned_cols=129  Identities=19%  Similarity=0.331  Sum_probs=111.2

Q ss_pred             CCccccCceeeEEEEEEe--------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH--------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~--------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+.        ..+|+|.+...  ......+.+.+|+.++..++||||+++++++...+..+++|
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  105 (314)
T 2ivs_A           28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV  105 (314)
T ss_dssp             EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEE
Confidence            467999999999999873        24999999764  34566788999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc-----------------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q psy697           74 SKCNGHTLYTNIHIYK-----------------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSL  130 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~-----------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l  130 (157)
                      ||+++++|.+++...+                       ..+++..+..++.|++.                      +|
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l  163 (314)
T 2ivs_A          106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQ----------------------GM  163 (314)
T ss_dssp             ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHH----------------------HH
T ss_pred             eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHH----------------------HH
Confidence            9999999999998643                       13788889999888777                      78


Q ss_pred             hccccccccccCCCCccccccccc
Q psy697          131 EKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       131 ~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+++++|||+|+.|++..+..
T Consensus       164 ~~lH~~~ivH~dikp~NIli~~~~  187 (314)
T 2ivs_A          164 QYLAEMKLVHRDLAARNILVAEGR  187 (314)
T ss_dssp             HHHHHTTEECCCCSGGGEEEETTT
T ss_pred             HHHHHCCCcccccchheEEEcCCC
Confidence            888889999999999999987543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.91  E-value=2.4e-24  Score=159.96  Aligned_cols=128  Identities=23%  Similarity=0.264  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|++.... ........+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus        27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  105 (486)
T 3mwu_A           27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG  105 (486)
T ss_dssp             EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHH-HBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eEEEeecCCEEEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence            5689999999999999864   49999986532 1122356788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+.+...+ .+++..+..++.|++.                      +|.++|+++|+|||+|+.|++..+.
T Consensus       106 ~~L~~~~~~~~-~~~~~~~~~i~~qi~~----------------------al~~lH~~~ivH~Dlkp~Nil~~~~  157 (486)
T 3mwu_A          106 GELFDEIIKRK-RFSEHDAARIIKQVFS----------------------GITYMHKHNIVHRDLKPENILLESK  157 (486)
T ss_dssp             CBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEESSS
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEeccCchHHEEEecC
Confidence            99999998765 7999999999998777                      7888888999999999999998653

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.91  E-value=7.5e-24  Score=147.03  Aligned_cols=128  Identities=26%  Similarity=0.354  Sum_probs=109.6

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..      .+|+|.+...  ......+.+.+|+..+..++||||+++++++ ..+..+++|||
T Consensus        20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~   96 (281)
T 1mp8_A           20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMEL   96 (281)
T ss_dssp             EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred             EeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEec
Confidence            4679999999999998843      3899988764  3456677899999999999999999999987 45678999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlkp~Nil~~~~~  153 (281)
T 1mp8_A           97 CTLGELRSFLQVRKYSLDLASLILYAYQLST----------------------ALAYLESKRFVHRDIAARNVLVSSND  153 (281)
T ss_dssp             CTTEEHHHHHHHTTTTSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecccccHHHEEECCCC
Confidence            9999999999876556899999999998887                      78888889999999999999987543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.91  E-value=6.8e-24  Score=148.00  Aligned_cols=129  Identities=20%  Similarity=0.259  Sum_probs=110.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ........+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   85 (292)
T 3o0g_A            7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ   85 (292)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             eeEecCCCCeEEEEEEECCCCceEEEEeeeccC-CcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence            4689999999999999855   49999998654 3444567788999999999999999999999999999999999975


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                       ++.+.+...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        86 -~l~~~~~~~~~~l~~~~~~~~~~ql~~----------------------~l~~lH~~~ivH~dikp~Nil~~~~~  138 (292)
T 3o0g_A           86 -DLKKYFDSCNGDLDPEIVKSFLFQLLK----------------------GLGFCHSRNVLHRDLKPQNLLINRNG  138 (292)
T ss_dssp             -EHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             -CHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEcCCC
Confidence             666666654457999999999998777                      88889999999999999999987654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.91  E-value=7.4e-25  Score=155.95  Aligned_cols=129  Identities=19%  Similarity=0.270  Sum_probs=109.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.............+.+|+.+++.++||||+++++++...+..+++|||+ +
T Consensus        14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~   92 (336)
T 3h4j_B           14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G   92 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence            5789999999999999854   59999987532111122456889999999999999999999999999999999999 7


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +++++|+++++|||+|+.|++..+..
T Consensus        93 g~l~~~l~~~~-~l~~~~~~~i~~qi~~----------------------aL~~LH~~givH~Dlkp~NIll~~~~  145 (336)
T 3h4j_B           93 GELFDYIVEKK-RMTEDEGRRFFQQIIC----------------------AIEYCHRHKIVHRDLKPENLLLDDNL  145 (336)
T ss_dssp             EEHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHHTCCCCCCSTTTEEECTTC
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEecCCchhhEEEcCCC
Confidence            89999988765 7999999999998777                      78888999999999999999987653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.91  E-value=5e-24  Score=149.14  Aligned_cols=129  Identities=23%  Similarity=0.332  Sum_probs=107.2

Q ss_pred             CCccccCceeeEEEEEEe-------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH-------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~-------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv   72 (157)
                      .+.||+|+||.||+|.+.       ..+|+|.+....  .....+.+.+|+.++..++|||++++++++...  ..++++
T Consensus        26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv  103 (302)
T 4e5w_A           26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI  103 (302)
T ss_dssp             EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEE
T ss_pred             hhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEE
Confidence            467999999999999952       149999997642  233457788999999999999999999999876  668999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++++|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       104 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dikp~Nil~~~  161 (302)
T 4e5w_A          104 MEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICK----------------------GMDYLGSRQYVHRDLAARNVLVES  161 (302)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             EEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHH----------------------HHHHhhcCCcccCCCchheEEEcC
Confidence            9999999999999776657999999999998877                      788888899999999999999865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       162 ~~  163 (302)
T 4e5w_A          162 EH  163 (302)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.91  E-value=8.5e-24  Score=151.13  Aligned_cols=130  Identities=21%  Similarity=0.279  Sum_probs=111.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+...........+.+.+|+.++..++||||+++++++...+..+++|||+. 
T Consensus        59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-  137 (348)
T 1u5q_A           59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-  137 (348)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence            3579999999999999744   499999976543444556788999999999999999999999999999999999997 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus       138 g~l~~~l~~~~~~l~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~Dlkp~NIll~~~~  191 (348)
T 1u5q_A          138 GSASDLLEVHKKPLQEVEIAAVTHGALQ----------------------GLAYLHSHNMIHRDVKAGNILLSEPG  191 (348)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             CCHHHHHHHhcCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeCCCCHHHEEECCCC
Confidence            6888888765557999999999998777                      78888999999999999999987543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.91  E-value=1.4e-23  Score=145.67  Aligned_cols=129  Identities=21%  Similarity=0.248  Sum_probs=113.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ......+.+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus        11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   89 (284)
T 3kk8_A           11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG   89 (284)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             hhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc-CCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence            4689999999999999854   59999997654 4555677888999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        90 ~~l~~~~~~~~-~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dikp~Nil~~~~~  142 (284)
T 3kk8_A           90 GELFEDIVARE-FYSEADASHCIQQILE----------------------SIAYCHSNGIVHRNLKPENLLLASKA  142 (284)
T ss_dssp             CBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEESSSS
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcCcCCCCHHHEEEecCC
Confidence            99999988765 7999999999997777                      88888999999999999999986543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.91  E-value=4.8e-24  Score=158.70  Aligned_cols=127  Identities=28%  Similarity=0.448  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+....    ...+.+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus       225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~  300 (495)
T 1opk_A          225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY  300 (495)
T ss_dssp             EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence            4679999999999999875   49999997643    2356789999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.++++... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|+|.....
T Consensus       301 g~L~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------~L~~LH~~~ivHrDlkp~NIll~~~~  355 (495)
T 1opk_A          301 GNLLDYLRECNRQEVSAVVLLYMATQISS----------------------AMEYLEKKNFIHRNLAARNCLVGENH  355 (495)
T ss_dssp             CBHHHHHHHSCTTTSCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             CCHHHHHHhcCcCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCChhhEEECCCC
Confidence            99999998643 35899999999998888                      88888999999999999999986543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.90  E-value=1.1e-23  Score=155.28  Aligned_cols=128  Identities=15%  Similarity=0.140  Sum_probs=103.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-----CceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-----PHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~   73 (157)
                      ++.||+|+||.||+|.+..   .||+|.+.... .+....+.+.+|+.++..++||||+++++++...     ..++++|
T Consensus        58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~  136 (458)
T 3rp9_A           58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL  136 (458)
T ss_dssp             CCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred             eeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence            5789999999999998764   49999997654 4566678899999999999999999999998543     5689999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+ +++|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|....
T Consensus       137 e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~----------------------aL~~LH~~~iiHrDlKp~NILl~~~  192 (458)
T 3rp9_A          137 EIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLV----------------------GVKYVHSAGILHRDLKPANCLVNQD  192 (458)
T ss_dssp             CCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECTT
T ss_pred             ecc-ccchhhhcccCC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCcCCCCCChhhEEECCC
Confidence            998 579999998654 7999999999998777                      8888999999999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       193 ~  193 (458)
T 3rp9_A          193 C  193 (458)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.90  E-value=1.3e-23  Score=150.26  Aligned_cols=129  Identities=25%  Similarity=0.398  Sum_probs=107.2

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCC-ceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPP-HLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~-~~~l   71 (157)
                      ++.||+|+||.||+|.+.+        .+|+|.+...  ......+.+.+|+.++..+ +||||+++++++...+ .+++
T Consensus        27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~i  104 (359)
T 3vhe_A           27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV  104 (359)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEE
T ss_pred             ceeecCCCCceEEEEEeccccccccceEEEEEEecCc--CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEE
Confidence            5689999999999998532        4999999764  3455567899999999999 8899999999988764 4899


Q ss_pred             EEecCCCCCHhHHHhhhcc-------------------------------------------------------------
Q psy697           72 VTSKCNGHTLYTNIHIYKE-------------------------------------------------------------   90 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~-------------------------------------------------------------   90 (157)
                      +|||+++|+|.+++.....                                                             
T Consensus       105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (359)
T 3vhe_A          105 IVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPED  184 (359)
T ss_dssp             EEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------C
T ss_pred             EEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccc
Confidence            9999999999999986431                                                             


Q ss_pred             ----cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           91 ----KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        91 ----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                          .+++..+..++.|++.                      +|.++|+++++|||+|+.|++.....
T Consensus       185 ~~~~~l~~~~~~~~~~ql~~----------------------aL~~LH~~~ivH~Dikp~NIll~~~~  230 (359)
T 3vhe_A          185 LYKDFLTLEHLICYSFQVAK----------------------GMEFLASRKCIHRDLAARNILLSEKN  230 (359)
T ss_dssp             TTTTCBCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             hhccccCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCChhhEEEcCCC
Confidence                1777778888887777                      88888999999999999999986543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.90  E-value=1.1e-23  Score=148.71  Aligned_cols=125  Identities=18%  Similarity=0.245  Sum_probs=106.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC--ceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP--HLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|.+..   .+|+|++....  .....+.+.+|+.++..++||||+++++++....  ..+++|||+
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~   91 (319)
T 4euu_A           14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC   91 (319)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECGGG--GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred             EEEecCCCCeEEEEEEECCCCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCC
Confidence            5689999999999999864   49999997542  1233566789999999999999999999987754  789999999


Q ss_pred             CCCCHhHHHhhhcc--cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           77 NGHTLYTNIHIYKE--KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        77 ~~g~L~~~i~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ++++|.+++.....  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.
T Consensus        92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~----------------------~L~~LH~~~ivH~Dlkp~NIll  145 (319)
T 4euu_A           92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG----------------------GMNHLRENGIVHRNIKPGNIMR  145 (319)
T ss_dssp             TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEE
T ss_pred             CCCCHHHHHHHhccccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEecCCCCHHHEEE
Confidence            99999999987542  3899999999998887                      8888899999999999999986

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.90  E-value=7.9e-24  Score=150.05  Aligned_cols=130  Identities=20%  Similarity=0.194  Sum_probs=104.4

Q ss_pred             CCccccCceeeEEEEEEe---c---ceEEEEeccCCCC-CHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWH---G---EVAVKVLDVDYLD-DEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~---~---~~avk~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||++...   .   .+|+|++...... .......+.+|+.++..++||||+++++++...+.++++||
T Consensus        22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  101 (327)
T 3a62_A           22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE  101 (327)
T ss_dssp             EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence            467999999999999874   1   4999999865321 22345567889999999999999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       102 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------al~~lH~~~ivH~Dlkp~Nill~~~~  158 (327)
T 3a62_A          102 YLSGGELFMQLEREG-IFMEDTACFYLAEISM----------------------ALGHLHQKGIIYRDLKPENIMLNHQG  158 (327)
T ss_dssp             CCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCTTTEEECTTS
T ss_pred             CCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEcccCCHHHeEECCCC
Confidence            999999999998765 7899999999887777                      88889999999999999999986543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.90  E-value=9e-24  Score=155.60  Aligned_cols=126  Identities=26%  Similarity=0.356  Sum_probs=109.1

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC-ceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP-HLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++.+.+ .+|+|.++...     ..+.+.+|+.++..++||||+++++++.... .++++|||+++|
T Consensus       198 ~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g  272 (450)
T 1k9a_A          198 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG  272 (450)
T ss_dssp             EEEEEECSSEEEEEEEETTEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTC
T ss_pred             EeeecCcCCeeEEEEEecCCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCC
Confidence            4679999999999999876 59999997642     3567899999999999999999999987664 799999999999


Q ss_pred             CHhHHHhhhcc-cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKE-KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.++++..+. .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       273 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~LH~~~ivHrDlkp~Nill~~~~  326 (450)
T 1k9a_A          273 SLVDYLRSRGRSVLGGDCLLKFSLDVCE----------------------AMEYLEGNNFVHRDLAARNVLVSEDN  326 (450)
T ss_dssp             BHHHHHHHHCTTTCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEECTTS
T ss_pred             cHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeCCCCCHhhEEECCCC
Confidence            99999987643 3789999999998888                      88889999999999999999987654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.90  E-value=1e-23  Score=145.97  Aligned_cols=123  Identities=17%  Similarity=0.272  Sum_probs=108.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+++|.+....   ....+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   90 (277)
T 3f3z_A           14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF---VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTG   90 (277)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG---CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCC
Confidence            4679999999999999865   48999987643   23356788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.
T Consensus        91 ~~L~~~~~~~~-~~~~~~~~~i~~~i~~----------------------~l~~lH~~~i~H~dlkp~Nil~  139 (277)
T 3f3z_A           91 GELFERVVHKR-VFRESDAARIMKDVLS----------------------AVAYCHKLNVAHRDLKPENFLF  139 (277)
T ss_dssp             CBHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEE
T ss_pred             CcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccCCCCCHHHEEE
Confidence            99999998765 7899999999998777                      8888899999999999999997

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.90  E-value=1.5e-23  Score=146.47  Aligned_cols=129  Identities=22%  Similarity=0.315  Sum_probs=109.6

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEe-cCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACM-KPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..      .+++|.+...  .+....+.+.+|+.+++.++|||++++++++. ..+..+++||
T Consensus        30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e  107 (298)
T 3f66_A           30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  107 (298)
T ss_dssp             EEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEE
T ss_pred             cceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEe
Confidence            4689999999999998643      2789998764  45566788999999999999999999999864 4567899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       108 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~----------------------~l~~lH~~~i~H~dikp~Nil~~~~~  165 (298)
T 3f66_A          108 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK----------------------GMKYLASKKFVHRDLAARNCMLDEKF  165 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECTTC
T ss_pred             CCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccCCCCchheEEECCCC
Confidence            99999999999875556899999999987777                      78888889999999999999986543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.90  E-value=1.3e-24  Score=159.87  Aligned_cols=130  Identities=19%  Similarity=0.217  Sum_probs=102.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.............+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus       153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~  232 (446)
T 4ejn_A          153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG  232 (446)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred             eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence            4679999999999999855   4999999764322334456678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+ ++|+|||+|+.|+|.....
T Consensus       233 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~giiHrDlkp~NIll~~~~  286 (446)
T 4ejn_A          233 GELFFHLSRER-VFSEDRARFYGAEIVS----------------------ALDYLHSEKNVVYRDLKLENLMLDKDG  286 (446)
T ss_dssp             CBHHHHHHHHS-CCCHHHHHHHHHHHHH----------------------HHHHHHHHTCCCCCCCCGGGEEECSSS
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHhhcCCEEECCCCHHHEEECCCC
Confidence            99999998765 7999999999998777                      7888887 8999999999999986544

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.90  E-value=1.5e-23  Score=147.31  Aligned_cols=129  Identities=19%  Similarity=0.199  Sum_probs=112.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... .+....+.+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus         8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (311)
T 4agu_A            8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH   86 (311)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCC
Confidence            4689999999999999854   49999987654 4455677888999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        87 ~~l~~~~~~~~-~~~~~~~~~i~~~l~~----------------------~l~~lH~~~ivH~dlkp~Nil~~~~~  139 (311)
T 4agu_A           87 TVLHELDRYQR-GVPEHLVKSITWQTLQ----------------------AVNFCHKHNCIHRDVKPENILITKHS  139 (311)
T ss_dssp             EHHHHHHHTSS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             chHHHHHhhhc-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCcCCCCChhhEEEcCCC
Confidence            99999887654 6999999999997777                      78888999999999999999986544

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.8e-23  Score=145.97  Aligned_cols=129  Identities=23%  Similarity=0.357  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCce-EEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHL-AIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e   74 (157)
                      .+.||+|+||.||+|.+..      .+|+|.+...  ......+.+.+|+.+++.++||||+++++++...+.. +++||
T Consensus        26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e  103 (298)
T 3pls_A           26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLP  103 (298)
T ss_dssp             EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEC
T ss_pred             CceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEe
Confidence            3679999999999998743      3899998764  4556678899999999999999999999999876554 99999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+.+|+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       104 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~LH~~~i~H~dikp~Nili~~~~  161 (298)
T 3pls_A          104 YMCHGDLLQFIRSPQRNPTVKDLISFGLQVAR----------------------GMEYLAEQKFVHRDLAARNCMLDESF  161 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECTTC
T ss_pred             cccCCCHHHHHhccccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCcceEEEcCCC
Confidence            99999999999875557899999999998777                      78888889999999999999986653

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.90  E-value=1e-23  Score=149.12  Aligned_cols=135  Identities=21%  Similarity=0.257  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC----ceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP----HLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|.+.+ .+|+|.+...    .........|+..+..++||||+++++++....    .++++|||+
T Consensus        29 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~  104 (322)
T 3soc_A           29 LEVKARGRFGCVWKAQLLNEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFH  104 (322)
T ss_dssp             EEEEECSTTCEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             hheecccCceEEEEEEECCCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecC
Confidence            5689999999999999876 4999999753    234455667888899999999999999998754    369999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|+|.++++..  .+++..+..++.|++. ++.|+|+.-.           ++..+|..+++|||+|+.|++.....
T Consensus       105 ~~g~L~~~l~~~--~~~~~~~~~i~~qi~~-al~~LH~~~~-----------~l~~~~~~~ivH~Dlkp~Nill~~~~  168 (322)
T 3soc_A          105 EKGSLSDFLKAN--VVSWNELCHIAETMAR-GLAYLHEDIP-----------GLKDGHKPAISHRDIKSKNVLLKNNL  168 (322)
T ss_dssp             TTCBHHHHHHHC--CBCHHHHHHHHHHHHH-HHHHHTCCEE-----------EETTEEECEEECSCCSGGGEEECTTC
T ss_pred             CCCCHHHHHHhc--CCCHHHHHHHHHHHHH-HHHHHHhhcc-----------ccccccCCCEEeCCCChHhEEECCCC
Confidence            999999999764  6899999999999999 7777665522           44556666999999999999986653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.4e-23  Score=147.58  Aligned_cols=130  Identities=17%  Similarity=0.140  Sum_probs=113.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+|+|.+......+....+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  118 (309)
T 2h34_A           39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING  118 (309)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred             EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence            4689999999999999754   4999999865434455568899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+++.|++....+
T Consensus       119 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~dlkp~NIl~~~~~  171 (309)
T 2h34_A          119 VDLAAMLRRQG-PLAPPRAVAIVRQIGS----------------------ALDAAHAAGATHRDVKPENILVSADD  171 (309)
T ss_dssp             EEHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCcCCcCCCChHHEEEcCCC
Confidence            99999998765 7999999999998777                      78888889999999999999987544

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.90  E-value=1.2e-23  Score=148.72  Aligned_cols=125  Identities=22%  Similarity=0.241  Sum_probs=109.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      +.||+|+||.||+|....   .+|+|.+....   ....+.+.+|+.++..++||||+++++++...+..+++|||++++
T Consensus        51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~  127 (321)
T 2c30_A           51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGG  127 (321)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSC
T ss_pred             EEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCC
Confidence            479999999999999853   59999997643   234567889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       128 ~L~~~l~~~--~l~~~~~~~i~~qi~~----------------------~L~~LH~~~ivH~Dlkp~NIll~~~~  178 (321)
T 2c30_A          128 ALTDIVSQV--RLNEEQIATVCEAVLQ----------------------ALAYLHAQGVIHRDIKSDSILLTLDG  178 (321)
T ss_dssp             BHHHHHTTC--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CHHHHHHhc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEECCCC
Confidence            999998753  6899999999998877                      88888999999999999999987544

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.90  E-value=1.2e-23  Score=148.53  Aligned_cols=128  Identities=21%  Similarity=0.271  Sum_probs=110.3

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|.+..  .+|+|.+...   .....+.+.+|+.++..++||||+++++++...+..+++|||+++|
T Consensus        44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  120 (321)
T 2qkw_B           44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPE---SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG  120 (321)
T ss_dssp             CCCSCBCSSSEEEEEECTTCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTC
T ss_pred             cceeecCCCeeEEEEEECCCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCC
Confidence            5689999999999999754  5999988764   3345677899999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++....   ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lH~~~ivH~dlkp~Nil~~~~~  176 (321)
T 2qkw_B          121 NLKRHLYGSDLPTMSMSWEQRLEICIGAAR----------------------GLHYLHTRAIIHRDVKSINILLDENF  176 (321)
T ss_dssp             BTGGGSSSSCCCSCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCSTTEEECTTC
T ss_pred             cHHHHHhccCCCccccCHHHHHHHHHHHHH----------------------HHHHhcCCCeecCCCCHHHEEECCCC
Confidence            9999997543   24889999999998877                      78888889999999999999986543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.90  E-value=1.5e-23  Score=145.89  Aligned_cols=127  Identities=17%  Similarity=0.264  Sum_probs=109.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+....  .....+.+.+|+.++..++||||+++++++......+++|||+++
T Consensus        27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  104 (285)
T 3is5_A           27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEG  104 (285)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSC
T ss_pred             cceeccCCCeEEEEEEEccCCceEEEEEeeccc--cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCC
Confidence            4689999999999999854   49999987653  223456788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+.+...   +..+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       105 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~----------------------~L~~LH~~~ivH~dikp~NIl~~~  159 (285)
T 3is5_A          105 GELLERIVSAQARGKALSEGYVAELMKQMMN----------------------ALAYFHSQHVVHKDLKPENILFQD  159 (285)
T ss_dssp             CBHHHHHHHHHHHTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCSGGGEEESS
T ss_pred             CcHHHHHHhhhhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEECCCCHHHEEEec
Confidence            9999998653   236899999999998777                      888889999999999999999854

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.90  E-value=6.1e-24  Score=148.02  Aligned_cols=129  Identities=17%  Similarity=0.246  Sum_probs=109.4

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|....  .+|+|.+.... .+....+.+.+|+.+++.++||||+++++++...+..+++|||+++ 
T Consensus         7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-   84 (288)
T 1ob3_A            7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-   84 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEEEEECCSS-GGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred             hhhcccCCCEEEEEEEcCCCCEEEEEEEeccc-cccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence            4689999999999999843  59999997643 2223346778999999999999999999999999999999999975 


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlkp~Nil~~~~~  137 (288)
T 1ob3_A           85 DLKKLLDVCEGGLESVTAKSFLLQLLN----------------------GIAYCHDRRVLHRDLKPQNLLINREG  137 (288)
T ss_dssp             EHHHHHHTSTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             CHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            999998876557899999999887777                      88888999999999999999986543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.2e-23  Score=149.71  Aligned_cols=129  Identities=26%  Similarity=0.383  Sum_probs=106.9

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   72 (157)
                      ++.||+|+||.||+|.+..        .+|+|.+...  ......+.+.+|+.++..+ +||||+++++++...+..+++
T Consensus        50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  127 (344)
T 1rjb_A           50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK--ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI  127 (344)
T ss_dssp             EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeeecCCCCceeEEeeeeccccCCcceEEEEEecccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEE
Confidence            4689999999999999732        4999999754  2334567889999999999 999999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhcc----------------------cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q psy697           73 TSKCNGHTLYTNIHIYKE----------------------KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSL  130 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~----------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l  130 (157)
                      |||+++|+|.+++...+.                      .+++..+..++.|++.                      +|
T Consensus       128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------aL  185 (344)
T 1rjb_A          128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK----------------------GM  185 (344)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHH----------------------HH
T ss_pred             EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHH----------------------HH
Confidence            999999999999986532                      2688888888887777                      88


Q ss_pred             hccccccccccCCCCccccccccc
Q psy697          131 EKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       131 ~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+++++|||+|+.|++.....
T Consensus       186 ~~LH~~~ivH~Dikp~NIll~~~~  209 (344)
T 1rjb_A          186 EFLEFKSCVHRDLAARNVLVTHGK  209 (344)
T ss_dssp             HHHHHTTEEETTCSGGGEEEETTT
T ss_pred             HHHHhCCcccCCCChhhEEEcCCC
Confidence            888999999999999999986543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.90  E-value=1.7e-23  Score=159.23  Aligned_cols=126  Identities=21%  Similarity=0.338  Sum_probs=108.8

Q ss_pred             ccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            4 RIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .||+|+||.||+|.+..     .+|+|.+...  ......+.+.+|+.++..++||||+++++++.. +.++++|||+++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~  419 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG  419 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCC--CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCC--CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCC
Confidence            68999999999998753     3999999764  233456789999999999999999999999876 568999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|+|.....
T Consensus       420 g~L~~~l~~~~~~l~~~~~~~i~~qi~~----------------------~L~~LH~~~iiHrDlkp~NILl~~~~  473 (613)
T 2ozo_A          420 GPLHKFLVGKREEIPVSNVAELLHQVSM----------------------GMKYLEEKNFVHRNLAARNVLLVNRH  473 (613)
T ss_dssp             CBHHHHHTTCTTTSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             CcHHHHHhhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEcCcCCHHHEEEcCCC
Confidence            9999999876557999999999998888                      88888999999999999999986543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.90  E-value=1.9e-23  Score=159.46  Aligned_cols=127  Identities=19%  Similarity=0.290  Sum_probs=108.7

Q ss_pred             CccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.||+|+||.||+|.+..     .+|+|++.... .+....+.+.+|+.++..++||||+++++++.. +..+++|||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~  452 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE  452 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence            369999999999997642     49999997653 344557789999999999999999999998864 55889999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+..
T Consensus       453 ~g~L~~~l~~~~-~l~~~~~~~i~~qi~~----------------------~L~yLH~~~iiHrDLkp~NILl~~~~  506 (635)
T 4fl3_A          453 LGPLNKYLQQNR-HVKDKNIIELVHQVSM----------------------GMKYLEESNFVHRDLAARNVLLVTQH  506 (635)
T ss_dssp             TEEHHHHHHHCT-TCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             CCCHHHHHhhCC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeCCCCChHhEEEeCCC
Confidence            999999998654 7999999999998888                      88888999999999999999986543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.90  E-value=2.4e-23  Score=146.25  Aligned_cols=129  Identities=23%  Similarity=0.335  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   72 (157)
                      ++.||+|+||.||+|.+.+        .+|+|.+...  ......+.+.+|+.++..+ +||||+++++++...+..+++
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv  105 (313)
T 1t46_A           28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI  105 (313)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc--hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEE
Confidence            4679999999999998632        4999999765  3455678899999999999 999999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhcc-----------------cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697           73 TSKCNGHTLYTNIHIYKE-----------------KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~-----------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      |||+++|+|.+++...+.                 .+++..+..++.|++.                      +|.++|+
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~  163 (313)
T 1t46_A          106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK----------------------GMAFLAS  163 (313)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHH----------------------HHHHHHH
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHH----------------------HHHHHHH
Confidence            999999999999986532                 3888999999998777                      7778888


Q ss_pred             ccccccCCCCccccccccc
Q psy697          136 KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       136 ~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++++|||+|+.|++.....
T Consensus       164 ~~i~H~dlkp~Nil~~~~~  182 (313)
T 1t46_A          164 KNCIHRDLAARNILLTHGR  182 (313)
T ss_dssp             TTCCCSCCSGGGEEEETTT
T ss_pred             CCeecCCCccceEEEcCCC
Confidence            8999999999999986543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.90  E-value=2.3e-23  Score=147.49  Aligned_cols=128  Identities=20%  Similarity=0.275  Sum_probs=110.4

Q ss_pred             CCccccCceeeEEEEEEe----c---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--CCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH----G---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--PPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~----~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv   72 (157)
                      .+.||+|+||.||+|.+.    .   .+|+|.+..   ......+.+.+|+.++..++||||+++++++..  ....+++
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv  104 (327)
T 3lxl_A           28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV  104 (327)
T ss_dssp             EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESS---CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred             hhhccCCCCeEEEEEEeccCCCCcceEEEEEEecc---CCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence            468999999999999952    1   499999976   445667789999999999999999999998874  4668999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++++|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------al~~lH~~~ivH~Dikp~NIl~~~  162 (327)
T 3lxl_A          105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK----------------------GMEYLGSRRCVHRDLAARNILVES  162 (327)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             EeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccCCCCChhhEEECC
Confidence            9999999999999876557999999999998888                      788888899999999999999865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       163 ~~  164 (327)
T 3lxl_A          163 EA  164 (327)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.90  E-value=2.2e-23  Score=149.30  Aligned_cols=128  Identities=17%  Similarity=0.224  Sum_probs=113.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++.+..   .+|+|.+...  ......+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  115 (360)
T 3eqc_A           38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG  115 (360)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEECC--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred             eeeecCCCCeEEEEEEECCCCcEEEEEEeccc--cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCC
Confidence            4679999999999999864   4999999875  3556678899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|.++|++ +++|||+|+.|++.....
T Consensus       116 ~~L~~~l~~~~-~~~~~~~~~i~~~i~~----------------------~l~~lh~~~~i~H~dlkp~Nil~~~~~  169 (360)
T 3eqc_A          116 GSLDQVLKKAG-RIPEQILGKVSIAVIK----------------------GLTYLREKHKIMHRDVKPSNILVNSRG  169 (360)
T ss_dssp             CBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHHHCCCCSCCSGGGEEECTTC
T ss_pred             CCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHhCCEEcCCccHHHEEECCCC
Confidence            99999998765 7899999999998777                      78888886 899999999999987654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.90  E-value=9.8e-24  Score=155.55  Aligned_cols=126  Identities=21%  Similarity=0.309  Sum_probs=108.2

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|.+..  .+|+|.+....    ...+.+.+|+.+++.++||||+++++++. .+.++++|||+++|
T Consensus       193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g  267 (454)
T 1qcf_A          193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKG  267 (454)
T ss_dssp             EEEEECCSSEEEEEEEETTTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred             EEEcccCCceEEEEEEECCccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCC
Confidence            4679999999999999865  59999997642    23677899999999999999999999886 56789999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.++++..+ ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus       268 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~LH~~~ivHrDlkp~Nill~~~~  321 (454)
T 1qcf_A          268 SLLDFLKSDEGSKQPLPKLIDFSAQIAE----------------------GMAFIEQRNYIHRDLRAANILVSASL  321 (454)
T ss_dssp             BHHHHHHSHHHHTCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSSCSGGGEEECTTC
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccCCCCCHHHEEECCCC
Confidence            9999998643 25888899999998888                      88888999999999999999987643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.90  E-value=3.8e-24  Score=161.08  Aligned_cols=131  Identities=22%  Similarity=0.170  Sum_probs=110.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.............+.+|+.++..++||||+++++++...+.++++|||+++
T Consensus       189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g  268 (576)
T 2acx_A          189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG  268 (576)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence            4689999999999999854   4999999753211122345678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ ..+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus       269 g~L~~~l~~~~~~~l~e~~~~~i~~qIl~----------------------aL~yLH~~gIvHrDLKPeNILld~~g  323 (576)
T 2acx_A          269 GDLKFHIYHMGQAGFPEARAVFYAAEICC----------------------GLEDLHRERIVYRDLKPENILLDDHG  323 (576)
T ss_dssp             CBHHHHHHSSSSCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECTTS
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeccCCchheEEEeCCC
Confidence            99999998643 24899999999997777                      88889999999999999999987644

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.90  E-value=1.6e-23  Score=148.48  Aligned_cols=128  Identities=20%  Similarity=0.318  Sum_probs=105.2

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..       ++++|.+...  ......+.+.+|+.++..++||||+++++++.... .++++|
T Consensus        20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e   96 (327)
T 3poz_A           20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQ   96 (327)
T ss_dssp             EEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEE
T ss_pred             ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEE
Confidence            4689999999999999743       2588887643  23345678899999999999999999999998754 789999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+.+|+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        97 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~LH~~~ivH~Dikp~NIll~~~~  154 (327)
T 3poz_A           97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK----------------------GMNYLEDRRLVHRDLAARNVLVKTPQ  154 (327)
T ss_dssp             CCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEEEETT
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHhhCCeeCCCCChheEEECCCC
Confidence            99999999999886657999999999998777                      88888999999999999999986643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.90  E-value=1.7e-23  Score=144.02  Aligned_cols=127  Identities=22%  Similarity=0.336  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++.+..  .+|+|.+....    ...+.+.+|+.++..++|||++++++++...+..+++|||++++
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   88 (267)
T 3t9t_A           13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG   88 (267)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTTT----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred             eeEecCCCceeEEEEEecCCCeEEEEEccccC----CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence            4679999999999999854  59999998643    22457889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++...+..+++..+..++.|++.                      +|.++|+++++|||+|+.|++....+
T Consensus        89 ~L~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~p~Nili~~~~  141 (267)
T 3t9t_A           89 CLSDYLRTQRGLFAAETLLGMCLDVCE----------------------GMAYLEEACVIHRDLAARNCLVGENQ  141 (267)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSSCCGGGEEECGGG
T ss_pred             cHHHHHhhCcccCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCchheEEECCCC
Confidence            999999876557899999999998887                      77888889999999999999986544

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=8.7e-24  Score=152.37  Aligned_cols=129  Identities=22%  Similarity=0.319  Sum_probs=109.7

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..      .+|+|.+...  .+....+.+.+|+.+++.++||||+++++++.. .+..+++||
T Consensus        94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e  171 (373)
T 3c1x_A           94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  171 (373)
T ss_dssp             EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred             CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence            3679999999999998743      3899998754  344567889999999999999999999998754 467899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       172 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrDlkp~NIll~~~~  229 (373)
T 3c1x_A          172 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK----------------------GMKFLASKKFVHRDLAARNCMLDEKF  229 (373)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             CCCCCCHHHHHhhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEecCccchheEEECCCC
Confidence            99999999999876556888999999888777                      88888999999999999999987643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.90  E-value=3.6e-23  Score=146.00  Aligned_cols=129  Identities=17%  Similarity=0.284  Sum_probs=110.4

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+..        .+|+|.+...  ........+.+|+.++..++||||+++++++...+..+++|
T Consensus        30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  107 (322)
T 1p4o_A           30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM  107 (322)
T ss_dssp             EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT--SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeEeccCCceEEEeeeecCccCCCCceEEEEEecccc--cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEE
Confidence            4679999999999998752        4999999764  34455677899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc---------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           74 SKCNGHTLYTNIHIYK---------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                      ||+++|+|.+++...+         ..+++..+..++.|++.                      +|+++|+++++|||+|
T Consensus       108 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~dik  165 (322)
T 1p4o_A          108 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD----------------------GMAYLNANKFVHRDLA  165 (322)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCSCCS
T ss_pred             EeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHH----------------------HHHHHHHCCCccCCCc
Confidence            9999999999998643         24688888889888777                      8888899999999999


Q ss_pred             Cccccccccc
Q psy697          145 HPLNLSRSAE  154 (157)
Q Consensus       145 ~~~~~~~~~~  154 (157)
                      +.|++.....
T Consensus       166 p~NIli~~~~  175 (322)
T 1p4o_A          166 ARNCMVAEDF  175 (322)
T ss_dssp             GGGEEECTTC
T ss_pred             cceEEEcCCC
Confidence            9999987653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.90  E-value=5e-24  Score=147.74  Aligned_cols=130  Identities=24%  Similarity=0.302  Sum_probs=111.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.............+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   93 (279)
T 3fdn_A           14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL   93 (279)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence            4689999999999999865   4999998653211222356788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... .+++..+..++.|++.                      +++++|+++++|||+|+.|++....+
T Consensus        94 ~~l~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~LH~~~i~H~dlkp~Nili~~~~  146 (279)
T 3fdn_A           94 GTVYRELQKLS-KFDEQRTATYITELAN----------------------ALSYCHSKRVIHRDIKPENLLLGSAG  146 (279)
T ss_dssp             EEHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHTTTCEECCCCGGGEEECTTS
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEecccCChHhEEEcCCC
Confidence            99999998765 7899999999998777                      78888889999999999999986654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.90  E-value=1.8e-23  Score=147.73  Aligned_cols=130  Identities=16%  Similarity=0.225  Sum_probs=111.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCH---HHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE---KTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|....   .+|+|.+........   ...+.+.+|+.++..++|||++++++++...+..+++|||
T Consensus        17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   96 (321)
T 2a2a_A           17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL   96 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEc
Confidence            4689999999999999864   499999976542111   1356788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        97 ~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------aL~~lH~~~ivH~dikp~NIl~~~~~  152 (321)
T 2a2a_A           97 VSGGELFDFLAQKE-SLSEEEATSFIKQILD----------------------GVNYLHTKKIAHFDLKPENIMLLDKN  152 (321)
T ss_dssp             CCSCBHHHHHHTCS-CEEHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEESCTT
T ss_pred             CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCChHHEEEecCC
Confidence            99999999998654 7899999999998777                      78888899999999999999886544

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.90  E-value=2.4e-23  Score=147.59  Aligned_cols=129  Identities=24%  Similarity=0.359  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   72 (157)
                      .+.||+|+||.||+|.+..        .+|+|.+...  ......+.+.+|+.++..+ +||||+++++++...+..+++
T Consensus        51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv  128 (333)
T 2i1m_A           51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST--AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI  128 (333)
T ss_dssp             EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc--cChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEE
Confidence            4679999999999999743        4899999765  3455677899999999999 899999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhc-------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccccc
Q psy697           73 TSKCNGHTLYTNIHIYK-------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRIL  139 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~-------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~  139 (157)
                      |||+++|+|.+++....             ..+++..+..++.|++.                      +|+++|+++++
T Consensus       129 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~iv  186 (333)
T 2i1m_A          129 TEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQ----------------------GMAFLASKNCI  186 (333)
T ss_dssp             EECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEE
T ss_pred             EecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHH----------------------HHHHHhcCCcc
Confidence            99999999999998642             24688889999888777                      88888989999


Q ss_pred             ccCCCCccccccccc
Q psy697          140 ARSPSHPLNLSRSAE  154 (157)
Q Consensus       140 ~rd~k~~~~~~~~~~  154 (157)
                      |||+|+.|++.....
T Consensus       187 H~Dlkp~NIl~~~~~  201 (333)
T 2i1m_A          187 HRDVAARNVLLTNGH  201 (333)
T ss_dssp             CSCCSGGGCEEEGGG
T ss_pred             cCCcccceEEECCCC
Confidence            999999999986543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.90  E-value=2e-23  Score=146.10  Aligned_cols=128  Identities=23%  Similarity=0.331  Sum_probs=109.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+++|.+...   .....+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  100 (302)
T 2j7t_A           24 VGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG  100 (302)
T ss_dssp             EEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTT
T ss_pred             cceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCC
Confidence            4679999999999999864   4999998763   334467788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++......+++..+..++.|++.                      +|.++|+++++|||+|+.|++....+
T Consensus       101 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlkp~Nil~~~~~  154 (302)
T 2j7t_A          101 GAVDAIMLELDRGLTEPQIQVVCRQMLE----------------------ALNFLHSKRIIHRDLKAGNVLMTLEG  154 (302)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCSGGGEEECTTS
T ss_pred             CcHHHHHHhhccCCCHHHHHHHHHHHHH----------------------HHHHHhcCCcccCCCCHHHEEECCCC
Confidence            9999998875557999999999998877                      78888889999999999999987544

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.90  E-value=5e-24  Score=147.60  Aligned_cols=131  Identities=20%  Similarity=0.241  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+...........+.+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus        16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   95 (278)
T 3cok_A           16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN   95 (278)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence            4679999999999999743   5999999653211112246788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        96 ~~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~Nili~~~~  149 (278)
T 3cok_A           96 GEMNRYLKNRVKPFSENEARHFMHQIIT----------------------GMLYLHSHGILHRDLTLSNLLLTRNM  149 (278)
T ss_dssp             EEHHHHHHTCSSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSSCCGGGEEECTTC
T ss_pred             CcHHHHHhhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHEEEcCCC
Confidence            9999999876557999999999998777                      78888889999999999999986543

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.90  E-value=2.3e-23  Score=148.57  Aligned_cols=121  Identities=21%  Similarity=0.230  Sum_probs=104.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.++.   .+|+|++......       ..+|+.++..+ +||||+++++++...+.++++|||++
T Consensus        27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   99 (342)
T 2qr7_A           27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK   99 (342)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence            4679999999999999865   4999999865311       24577778777 89999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +|+|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       100 gg~L~~~i~~~~-~~~~~~~~~~~~qi~~----------------------al~~lH~~givHrDlkp~NIl~~~  151 (342)
T 2qr7_A          100 GGELLDKILRQK-FFSEREASAVLFTITK----------------------TVEYLHAQGVVHRDLKPSNILYVD  151 (342)
T ss_dssp             SCBHHHHHHTCT-TCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEESS
T ss_pred             CCcHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcEeccCCHHHEEEec
Confidence            999999998755 7999999999998777                      788889999999999999999643

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.90  E-value=1.3e-23  Score=149.07  Aligned_cols=126  Identities=16%  Similarity=0.210  Sum_probs=105.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ........+.+|+.++..++||||+++++++...+.++++|||++ 
T Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-  116 (329)
T 3gbz_A           39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-EEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-  116 (329)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             EEEEEecCCeEEEEEEECCCCceEEEEEEcccc-cccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-
Confidence            4689999999999998754   49999997654 333445667899999999999999999999999999999999997 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       117 ~~L~~~~~~~~-~~~~~~~~~i~~ql~~----------------------~l~~LH~~~ivH~Dlkp~NIll~~  167 (329)
T 3gbz_A          117 NDLKKYMDKNP-DVSMRVIKSFLYQLIN----------------------GVNFCHSRRCLHRDLKPQNLLLSV  167 (329)
T ss_dssp             EEHHHHHHHCT-TCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEEEC
T ss_pred             CCHHHHHhhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEECCCCCHHHEEEec
Confidence            59999998765 6999999999998777                      888889999999999999999854

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.90  E-value=1.3e-23  Score=150.18  Aligned_cols=123  Identities=19%  Similarity=0.265  Sum_probs=102.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+....     ..+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  132 (349)
T 2w4o_A           58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG  132 (349)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence            4679999999999999865   49999997632     345678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       133 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------~L~~LH~~~ivH~Dikp~NIll~~  183 (349)
T 2w4o_A          133 GELFDRIVEKG-YYSERDAADAVKQILE----------------------AVAYLHENGIVHRDLKPENLLYAT  183 (349)
T ss_dssp             CBHHHHHTTCS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEESS
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeEecCCCcccEEEec
Confidence            99999998755 6899999999998777                      888889999999999999999864

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.90  E-value=2e-23  Score=147.37  Aligned_cols=129  Identities=22%  Similarity=0.262  Sum_probs=100.1

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+.||+|+||.||+|....   .+|+|.+....  .....+.+.+|+.+++.++||||+++++++...+.++++|||++
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   86 (317)
T 2pmi_A            9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD   86 (317)
T ss_dssp             ----------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC
T ss_pred             EeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC
Confidence            35789999999999998754   49999997643  22334567889999999999999999999999999999999997


Q ss_pred             CCCHhHHHhhhc-----ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           78 GHTLYTNIHIYK-----EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        78 ~g~L~~~i~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                       |+|.+++....     ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus        87 -~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------aL~~lH~~~ivH~Dlkp~NIl~~~  143 (317)
T 2pmi_A           87 -NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ----------------------GLAFCHENKILHRDLKPQNLLINK  143 (317)
T ss_dssp             -CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECT
T ss_pred             -CCHHHHHHhccccccccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeCCCChHHeEEcC
Confidence             59999987642     24888888888887777                      888899999999999999999866


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      .+
T Consensus       144 ~~  145 (317)
T 2pmi_A          144 RG  145 (317)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.90  E-value=5.2e-23  Score=144.87  Aligned_cols=129  Identities=17%  Similarity=0.145  Sum_probs=107.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ...........|+..+..+ +|||++++++++...+.++++|||+ 
T Consensus        62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-  139 (311)
T 3p1a_A           62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF-RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-  139 (311)
T ss_dssp             EEEEEEETTEEEEEEEETTTSCEEEEEEESSSC-CSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred             eheeccCCCeEEEEEEECCCCeEEEEEEecccc-cChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-
Confidence            3579999999999999864   49999987654 3444555566666666665 9999999999999999999999999 


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       140 ~~~L~~~~~~~~~~l~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~Dikp~NIll~~~~  194 (311)
T 3p1a_A          140 GPSLQQHCEAWGASLPEAQVWGYLRDTLL----------------------ALAHLHSQGLVHLDVKPANIFLGPRG  194 (311)
T ss_dssp             CCBHHHHHHHHCSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECGGG
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEecCCCCHHHEEECCCC
Confidence            67999998876657999999999998888                      88888889999999999999986543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.90  E-value=7.1e-23  Score=144.55  Aligned_cols=127  Identities=23%  Similarity=0.323  Sum_probs=109.5

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~lv   72 (157)
                      ++.||+|+||.||++.+..       .+|+|.+...  ......+.+.+|+.+++.++||||+++++++...  ..++++
T Consensus        36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  113 (318)
T 3lxp_A           36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV  113 (318)
T ss_dssp             EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred             hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence            4689999999999987632       4999999865  4456678899999999999999999999999874  678999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++|+|.+++...  .+++..+..++.|++.                      +|.++|+++++|||+|+.|++...
T Consensus       114 ~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~----------------------~l~~LH~~~ivH~Dikp~Nil~~~  169 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICE----------------------GMAYLHAQHYIHRDLAARNVLLDN  169 (318)
T ss_dssp             ECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECT
T ss_pred             EecccCCcHHHHHhhC--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCccCCCCchheEEEcC
Confidence            9999999999999864  5899999999997777                      888888999999999999999865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       170 ~~  171 (318)
T 3lxp_A          170 DR  171 (318)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=5.7e-23  Score=142.98  Aligned_cols=127  Identities=21%  Similarity=0.333  Sum_probs=109.2

Q ss_pred             CccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.||+|+||.||+|.+..     .+|+|.+...  ......+.+.+|+.++..++||||+++++++ ..+..+++|||++
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~   92 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAG   92 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCT
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCc--cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCC
Confidence            379999999999998632     4999999865  3456678899999999999999999999998 5566899999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...+..+++..+..++.|++.                      +|.++|+++++|||+|+.|++.....
T Consensus        93 ~~~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlkp~Nili~~~~  147 (287)
T 1u59_A           93 GGPLHKFLVGKREEIPVSNVAELLHQVSM----------------------GMKYLEEKNFVHRDLAARNVLLVNRH  147 (287)
T ss_dssp             TEEHHHHHTTCTTTSCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEEEETT
T ss_pred             CCCHHHHHHhCCccCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeeCCCchheEEEcCCC
Confidence            99999999765557999999999998887                      77888889999999999999986543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.90  E-value=4.9e-23  Score=142.88  Aligned_cols=130  Identities=19%  Similarity=0.276  Sum_probs=111.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCH---HHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE---KTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||++....   .+|+|.+........   ...+.+.+|+.++..++|||++++++++...+..+++|||
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   89 (283)
T 3bhy_A           10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL   89 (283)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence            4689999999999999864   599999876542211   1367788999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+++.|++....+
T Consensus        90 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~~~  145 (283)
T 3bhy_A           90 VSGGELFDFLAEKE-SLTEDEATQFLKQILD----------------------GVHYLHSKRIAHFDLKPENIMLLDKN  145 (283)
T ss_dssp             CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEESCSS
T ss_pred             cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCccCCCCChHHEEEecCC
Confidence            99999999998755 7999999999998777                      78888999999999999999886543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.90  E-value=5.1e-23  Score=144.32  Aligned_cols=124  Identities=20%  Similarity=0.221  Sum_probs=106.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||++....   .+|+|.+...   .......+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   90 (304)
T 2jam_A           14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS---PAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSG   90 (304)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eeeccCCCCceEEEEEECCCCCEEEEEEEecc---cccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCC
Confidence            4689999999999999853   5999999863   223445688999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..
T Consensus        91 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dikp~NIl~~  140 (304)
T 2jam_A           91 GELFDRILERG-VYTEKDASLVIQQVLS----------------------AVKYLHENGIVHRDLKPENLLYL  140 (304)
T ss_dssp             CBHHHHHHHHS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCSCCGGGCEES
T ss_pred             ccHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCCHHHEEEe
Confidence            99999998765 7899999999987777                      88888999999999999999873

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.90  E-value=1.5e-23  Score=154.50  Aligned_cols=126  Identities=25%  Similarity=0.355  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|.+.+  .+|+|.+....    ...+.+.+|+.+++.++||||+++++++.. +..+++|||+++|
T Consensus       189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~g  263 (452)
T 1fmk_A          189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG  263 (452)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEECCTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTC
T ss_pred             eeeecCCCCeEEEEEEECCCceEEEEEeccCC----CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCC
Confidence            4679999999999999876  49999997643    224678999999999999999999998866 6789999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus       264 sL~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~LH~~~ivHrDlkp~Nill~~~~  317 (452)
T 1fmk_A          264 SLLDFLKGETGKYLRLPQLVDMAAQIAS----------------------GMAYVERMNYVHRDLRAANILVGENL  317 (452)
T ss_dssp             BHHHHHSHHHHTTCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeCCCCChhhEEECCCC
Confidence            9999998642 35899999999998888                      78888999999999999999986543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.90  E-value=7.5e-24  Score=158.80  Aligned_cols=131  Identities=21%  Similarity=0.224  Sum_probs=110.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.++.   .+|+|.+.+.........+.+.+|..++..++||||+++++++.....++++|||+++
T Consensus       190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g  269 (543)
T 3c4z_A          190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG  269 (543)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence            3579999999999999854   4999999754211122346788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+   ..+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus       270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~----------------------aL~~LH~~gIvHrDLKP~NILl~~~g  326 (543)
T 3c4z_A          270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS----------------------GLEHLHQRNIIYRDLKPENVLLDDDG  326 (543)
T ss_dssp             CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECTTS
T ss_pred             CCHHHHHHHhhcccccccHHHHHHHHHHHHH----------------------HHHHHHHcCCcccCCChHHEEEeCCC
Confidence            99999987632   35899999999998777                      88889999999999999999987654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.90  E-value=1.1e-24  Score=154.75  Aligned_cols=130  Identities=20%  Similarity=0.225  Sum_probs=102.1

Q ss_pred             CCCccccCceeeEEEEEEec-ceEEEEeccCCCC-----CHHHHHHHHHHHHHHHhcC---------CCceeeeeeE---
Q psy697            1 MGDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLD-----DEKTWEAFKLEVTTFRKTR---------HENLVLFMGA---   62 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~-----~~~~~~~~~~e~~~l~~l~---------h~niv~~~~~---   62 (157)
                      +.+.||+|+||.||+|.+.+ .+|+|.+......     .....+.+.+|+.+++.++         |||++++.+.   
T Consensus        24 ~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~  103 (336)
T 2vuw_A           24 RCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV  103 (336)
T ss_dssp             TCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred             heeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence            35789999999999999865 5999999875321     2223467888998888875         6666666554   


Q ss_pred             --------------Eec-------------CCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcC
Q psy697           63 --------------CMK-------------PPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSY  115 (157)
Q Consensus        63 --------------~~~-------------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  115 (157)
                                    +..             .+.++++|||+++|++.+.+..  ..+++..+..++.|++.         
T Consensus       104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~---------  172 (336)
T 2vuw_A          104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTA---------  172 (336)
T ss_dssp             ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHH---------
T ss_pred             cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHH---------
Confidence                          332             6789999999999977666654  26899999999998887         


Q ss_pred             CCCCCCCHHHHHHHHhccc-cccccccCCCCccccccccc
Q psy697          116 KPSDRPDFITLMKSLEKLP-KKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       116 ~~~~Rp~~~~i~~~l~~~~-~~~~~~rd~k~~~~~~~~~~  154 (157)
                                   +|+++| +++|+|||+|+.|+|....+
T Consensus       173 -------------aL~~lH~~~~ivHrDlKp~NILl~~~~  199 (336)
T 2vuw_A          173 -------------SLAVAEASLRFEHRDLHWGNVLLKKTS  199 (336)
T ss_dssp             -------------HHHHHHHHHCCBCSCCCGGGEEEEECS
T ss_pred             -------------HHHHHHHhCCEeECCCCHHHEEEeccC
Confidence                         888899 89999999999999987653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.90  E-value=8.4e-23  Score=143.25  Aligned_cols=131  Identities=24%  Similarity=0.324  Sum_probs=111.7

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCC-CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYL-DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ++.||+|+||.||+|...+ .+|+|.+..... ......+.+.+|+.++..++||||+++++++...+..+++|||++++
T Consensus        36 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  115 (307)
T 2nru_A           36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG  115 (307)
T ss_dssp             CCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             CCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence            4789999999999999866 599999875431 23345678899999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhc--ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK--EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++....  ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       116 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lH~~~i~H~dlkp~Nili~~~~  170 (307)
T 2nru_A          116 SLLDRLSCLDGTPPLSWHMRCKIAQGAAN----------------------GINFLHENHHIHRDIKSANILLDEAF  170 (307)
T ss_dssp             BHHHHHHTGGGCCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             cHHHHHHhccCCCCCCHHHHHHHHHHHHH----------------------HHHHHhcCCeecCCCCHHHEEEcCCC
Confidence            9999997532  25899999999998777                      78888989999999999999986543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.90  E-value=9.9e-23  Score=143.12  Aligned_cols=131  Identities=20%  Similarity=0.283  Sum_probs=111.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+......+......+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus        37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  116 (310)
T 2wqm_A           37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA  116 (310)
T ss_dssp             EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred             EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence            4679999999999999743   5999999865445566778899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...   +..+++..+..++.|++.                      +|.++|+++++|||+++.|++....+
T Consensus       117 ~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~LH~~~i~H~dl~p~NIl~~~~~  173 (310)
T 2wqm_A          117 GDLSRMIKHFKKQKRLIPERTVWKYFVQLCS----------------------ALEHMHSRRVMHRDIKPANVFITATG  173 (310)
T ss_dssp             CBHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CCHHHHHHHhcccccCCCHHHHHHHHHHHHH----------------------HHHHHhhCCeeCCCCcHHHEEEcCCC
Confidence            9999998752   235899999999998777                      78888889999999999999987544

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.90  E-value=4.9e-23  Score=146.24  Aligned_cols=129  Identities=22%  Similarity=0.396  Sum_probs=110.6

Q ss_pred             CCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~   70 (157)
                      ++.||+|+||.||+|.+..          .+|+|.+...  ........+.+|+.++..+ +||||+++++++...+..+
T Consensus        40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~  117 (334)
T 2pvf_A           40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY  117 (334)
T ss_dssp             EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCE
T ss_pred             eeEEeecCceeEEEeEeccccccccccceEEEEeeeccC--CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceE
Confidence            4689999999999998731          4999999764  3455677889999999999 9999999999999999999


Q ss_pred             EEEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697           71 IVTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      ++|||+++|+|.+++...+               ..+++..+..++.|++.                      +|.++|+
T Consensus       118 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~  175 (334)
T 2pvf_A          118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR----------------------GMEYLAS  175 (334)
T ss_dssp             EEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHH----------------------HHHHHHH
T ss_pred             EEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHH----------------------HHHHHHh
Confidence            9999999999999998643               13788888899887777                      7888888


Q ss_pred             ccccccCCCCccccccccc
Q psy697          136 KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       136 ~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++++|||+|+.|++.....
T Consensus       176 ~~ivH~Dlkp~NIll~~~~  194 (334)
T 2pvf_A          176 QKCIHRDLAARNVLVTENN  194 (334)
T ss_dssp             TTEECSCCSGGGEEECTTC
T ss_pred             CCeeCCCCccceEEEcCCC
Confidence            9999999999999986543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.90  E-value=7e-23  Score=142.08  Aligned_cols=128  Identities=22%  Similarity=0.250  Sum_probs=109.7

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..      .+|+|.+...  ......+.+.+|+.++..++|||++++++++.. +..+++|||
T Consensus        17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~   93 (281)
T 3cc6_A           17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMEL   93 (281)
T ss_dssp             EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc--cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEec
Confidence            4679999999999998754      2899999765  345567889999999999999999999998765 456899999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        94 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlkp~Nil~~~~~  150 (281)
T 3cc6_A           94 YPYGELGHYLERNKNSLKVLTLVLYSLQICK----------------------AMAYLESINCVHRDIAVRNILVASPE  150 (281)
T ss_dssp             CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCSGGGEEEEETT
T ss_pred             CCCCCHHHHHHhccccCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCccceEEECCCC
Confidence            9999999999876656999999999998877                      77888888999999999999986543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.90  E-value=5.3e-23  Score=145.61  Aligned_cols=128  Identities=23%  Similarity=0.306  Sum_probs=107.8

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+.+        .+|+|.+...  ........+.+|+.++..++||||+++++++......+++|
T Consensus        35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  112 (327)
T 2yfx_A           35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILM  112 (327)
T ss_dssp             EEECC--CSSCEEEEEC--------CCEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc--cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEE
Confidence            4689999999999998532        4999999754  34556778899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           74 SKCNGHTLYTNIHIYK------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ||+++++|.+++...+      ..+++..+..++.|++.                      +|.++|+++++|||+|+.|
T Consensus       113 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------al~~LH~~~i~H~dlkp~N  170 (327)
T 2yfx_A          113 ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC----------------------GCQYLEENHFIHRDIAARN  170 (327)
T ss_dssp             ECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGG
T ss_pred             ecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHH----------------------HHHHHhhCCeecCcCCHhH
Confidence            9999999999998753      24888889999998777                      8888888999999999999


Q ss_pred             cccccc
Q psy697          148 NLSRSA  153 (157)
Q Consensus       148 ~~~~~~  153 (157)
                      ++....
T Consensus       171 Ili~~~  176 (327)
T 2yfx_A          171 CLLTCP  176 (327)
T ss_dssp             EEESCS
T ss_pred             EEEecC
Confidence            998743

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.90  E-value=2.4e-23  Score=147.00  Aligned_cols=130  Identities=18%  Similarity=0.273  Sum_probs=104.2

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCce------
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHL------   69 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~------   69 (157)
                      ++.||+|+||.||+|.+..      .+|+|.+.... ......+.+.+|+.+++.++||||+++++++......      
T Consensus        28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~  106 (323)
T 3qup_A           28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI-IASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP  106 (323)
T ss_dssp             EEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred             eceecccCCeEEEEEEEcccCCcceeEEEEEecccc-cCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence            4689999999999998744      48999997654 2345577899999999999999999999999876554      


Q ss_pred             EEEEecCCCCCHhHHHhhhc-----ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           70 AIVTSKCNGHTLYTNIHIYK-----EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                      +++|||+++|+|.+++....     ..+++..+..++.|++.                      +|.++|+++++|||+|
T Consensus       107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------al~~LH~~~ivH~Dik  164 (323)
T 3qup_A          107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC----------------------GMEYLSSRNFIHRDLA  164 (323)
T ss_dssp             EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCS
T ss_pred             EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHH----------------------HHHHHHcCCcccCCCC
Confidence            99999999999999997643     14889999999998887                      7888888999999999


Q ss_pred             Cccccccccc
Q psy697          145 HPLNLSRSAE  154 (157)
Q Consensus       145 ~~~~~~~~~~  154 (157)
                      +.|++.....
T Consensus       165 p~NIli~~~~  174 (323)
T 3qup_A          165 ARNCMLAEDM  174 (323)
T ss_dssp             GGGEEECTTS
T ss_pred             cceEEEcCCC
Confidence            9999987654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.89  E-value=7e-23  Score=142.69  Aligned_cols=126  Identities=25%  Similarity=0.276  Sum_probs=108.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec----CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK----PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..   .+++|.+.... .+....+.+.+|+.++..++||||+++++++..    ...++++||
T Consensus        31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e  109 (290)
T 1t4h_A           31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE  109 (290)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred             eeeccCCCCeEEEEeEecCCceEEEEEEecchh-hCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence            3579999999999998855   48999987654 455667889999999999999999999998865    356899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc--ccccCCCCcccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR--ILARSPSHPLNLSR  151 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~--~~~rd~k~~~~~~~  151 (157)
                      |+++++|.+++...+ .+++..+..++.|++.                      +|.++|+++  ++|||+|+.|++..
T Consensus       110 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~~~i~H~dikp~Nil~~  165 (290)
T 1t4h_A          110 LMTSGTLKTYLKRFK-VMKIKVLRSWCRQILK----------------------GLQFLHTRTPPIIHRDLKCDNIFIT  165 (290)
T ss_dssp             CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHTSSSCCCCSCCCGGGEEES
T ss_pred             ecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHH----------------------HHHHHHcCCCCEEECCCCHHHEEEE
Confidence            999999999998755 7899999999998888                      677777777  99999999999986

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.89  E-value=4.5e-23  Score=145.20  Aligned_cols=128  Identities=16%  Similarity=0.147  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec----CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK----PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e   74 (157)
                      .+.||+|+||.||++....   .+|+|.+..   .+....+.+.+|+.++..++||||+++++++..    ....+++||
T Consensus        34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e  110 (317)
T 2buj_A           34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILC---HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP  110 (317)
T ss_dssp             EEEEEC--CEEEEEEEETTTCCEEEEEEEEE---SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEE
T ss_pred             EEEecCCCCeEEEEEEecCCCcEEEEEEEec---CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEE
Confidence            4689999999999999744   599999876   345677889999999999999999999999873    357899999


Q ss_pred             cCCCCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           75 KCNGHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        75 ~~~~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      |+++|+|.+++...   +..+++..+..++.|++.                      +|.++|+++++|||+|+.|++..
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~----------------------~L~~LH~~~ivH~dlkp~NIl~~  168 (317)
T 2buj_A          111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR----------------------GLEAIHAKGYAHRDLKPTNILLG  168 (317)
T ss_dssp             CCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEEC
T ss_pred             eCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCHHHEEEc
Confidence            99999999999863   346899999999998888                      78888889999999999999986


Q ss_pred             ccc
Q psy697          152 SAE  154 (157)
Q Consensus       152 ~~~  154 (157)
                      ..+
T Consensus       169 ~~~  171 (317)
T 2buj_A          169 DEG  171 (317)
T ss_dssp             TTS
T ss_pred             CCC
Confidence            543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.89  E-value=2.2e-23  Score=151.21  Aligned_cols=125  Identities=18%  Similarity=0.245  Sum_probs=106.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC--ceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP--HLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+....  .....+.+.+|+.++..++||||+++++++...+  ..+++|||+
T Consensus        14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~   91 (396)
T 4eut_A           14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC   91 (396)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECGGG--GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCC
T ss_pred             EEEEEcCCCeEEEEEEECCCCcEEEEEEecccc--ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecC
Confidence            5689999999999999864   49999997542  1233566788999999999999999999988754  789999999


Q ss_pred             CCCCHhHHHhhhcc--cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           77 NGHTLYTNIHIYKE--KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        77 ~~g~L~~~i~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ++|+|.+++.....  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.
T Consensus        92 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~Dlkp~NIll  145 (396)
T 4eut_A           92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG----------------------GMNHLRENGIVHRNIKPGNIMR  145 (396)
T ss_dssp             TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEE
T ss_pred             CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEECCcCHHHEEE
Confidence            99999999987542  3899999999998777                      8888899999999999999986

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.89  E-value=3.4e-23  Score=151.79  Aligned_cols=128  Identities=16%  Similarity=0.177  Sum_probs=111.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-----CceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-----PHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... .+....+.+.+|+.++..++||||+++++++...     ..++++|
T Consensus        31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~  109 (432)
T 3n9x_A           31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVL  109 (432)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred             EEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEE
Confidence            4689999999999999865   49999997654 4566678899999999999999999999998765     5789999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||++ |+|.+++.... .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus       110 e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~----------------------aL~~LH~~givHrDlkp~NILl~~~  165 (432)
T 3n9x_A          110 EIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLL----------------------GENFIHESGIIHRDLKPANCLLNQD  165 (432)
T ss_dssp             ECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             ecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCCCCCCCHHHeEECCC
Confidence            9986 59999998654 6999999999998877                      8888999999999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       166 ~  166 (432)
T 3n9x_A          166 C  166 (432)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.89  E-value=3.8e-23  Score=146.33  Aligned_cols=128  Identities=25%  Similarity=0.368  Sum_probs=108.8

Q ss_pred             CCccccCceeeEEEEEEe-------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC--ceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWH-------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP--HLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~-------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv   72 (157)
                      .+.||+|+||.||++.+.       ..+|+|.+..   ......+.+.+|+.++..++||||+++++++...+  .++++
T Consensus        46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  122 (326)
T 2w1i_A           46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI  122 (326)
T ss_dssp             EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS---CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred             eeeeccCCCeEEEEEEeccccCCCceEEEEEEecc---CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence            468999999999999852       1499999976   34456778999999999999999999999887653  78999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++++|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~dikp~NIli~~  180 (326)
T 2w1i_A          123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----------------------GMEYLGTKRYIHRDLATRNILVEN  180 (326)
T ss_dssp             ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEEEE
T ss_pred             EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeccCCCcceEEEcC
Confidence            9999999999999876556999999999998777                      788888899999999999999865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       181 ~~  182 (326)
T 2w1i_A          181 EN  182 (326)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.89  E-value=4.4e-23  Score=143.45  Aligned_cols=127  Identities=28%  Similarity=0.452  Sum_probs=110.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+...    ....+.+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   93 (288)
T 3kfa_A           18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY   93 (288)
T ss_dssp             EEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             EeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCC
Confidence            4679999999999999875   4999999753    23467788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus        94 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lH~~~i~H~dikp~Nil~~~~~  148 (288)
T 3kfa_A           94 GNLLDYLRECNRQEVSAVVLLYMATQISS----------------------AMEYLEKKNFIHRDLAARNCLVGENH  148 (288)
T ss_dssp             EEHHHHHHHCCTTTSCHHHHHHHHHHHHH----------------------HHHHHHHHTCCCSCCSGGGEEECGGG
T ss_pred             CcHHHHHHhcccCCccHhHHHHHHHHHHH----------------------HHHHHHHCCccCCCCCcceEEEcCCC
Confidence            99999998643 35899999999997777                      88888999999999999999986544

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.89  E-value=5.1e-23  Score=145.97  Aligned_cols=129  Identities=19%  Similarity=0.167  Sum_probs=111.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... .+....+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  108 (331)
T 4aaa_A           30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH  108 (331)
T ss_dssp             EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             eeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCc
Confidence            4689999999999999864   49999987654 4555667788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       109 ~~l~~~~~~~~-~~~~~~~~~~~~qi~~----------------------~l~~LH~~~ivH~dlkp~Nil~~~~~  161 (331)
T 4aaa_A          109 TILDDLELFPN-GLDYQVVQKYLFQIIN----------------------GIGFCHSHNIIHRDIKPENILVSQSG  161 (331)
T ss_dssp             EHHHHHHHSTT-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             chHHHHHhhcc-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEccCcChheEEEcCCC
Confidence            98888876544 7999999999998777                      78888889999999999999986543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.89  E-value=9.2e-24  Score=162.14  Aligned_cols=130  Identities=22%  Similarity=0.191  Sum_probs=110.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.+..   .+|+|++.+.........+.+..|..++..+ +||+|+++++++...+.+++||||++
T Consensus       346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~  425 (674)
T 3pfq_A          346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN  425 (674)
T ss_dssp             EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred             EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence            4679999999999999866   3999999753211223345677888888887 79999999999999999999999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|..+..
T Consensus       426 gg~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~gIiHrDLKp~NILl~~~g  479 (674)
T 3pfq_A          426 GGDLMYHIQQVG-RFKEPHAVFYAAEIAI----------------------GLFFLQSKGIIYRDLKLDNVMLDSEG  479 (674)
T ss_dssp             SCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTSEECCCCCSTTEEECSSS
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEeccCChhhEEEcCCC
Confidence            999999998765 7999999999997777                      88889999999999999999986654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.89  E-value=1.2e-23  Score=146.15  Aligned_cols=130  Identities=19%  Similarity=0.274  Sum_probs=110.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+...........+.+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus        19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   98 (284)
T 2vgo_A           19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR   98 (284)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence            4679999999999999865   4999998653211112246788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +++++|+++++|||+++.|++....+
T Consensus        99 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~~~  151 (284)
T 2vgo_A           99 GELYKELQKHG-RFDEQRSATFMEELAD----------------------ALHYCHERKVIHRDIKPENLLMGYKG  151 (284)
T ss_dssp             EEHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECCCCSGGGEEECTTC
T ss_pred             CcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCceecCCCHHHEEEcCCC
Confidence            99999998765 7899999999998777                      78888899999999999999986543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.89  E-value=1.8e-23  Score=144.65  Aligned_cols=130  Identities=21%  Similarity=0.277  Sum_probs=110.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .+|+|.+......+....+.+.+|+..+..++|||++++++++...+..+++|||+++
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   95 (276)
T 2h6d_A           16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG   95 (276)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence            4689999999999999853   5999998653211122355788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|+|+++.|++.....
T Consensus        96 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~~~  148 (276)
T 2h6d_A           96 GELFDYICKHG-RVEEMEARRLFQQILS----------------------AVDYCHRHMVVHRDLKPENVLLDAHM  148 (276)
T ss_dssp             CBHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHHCSSCCCCCGGGEEECTTS
T ss_pred             CcHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCccCCCChhhEEECCCC
Confidence            99999998765 7899999999987777                      78888899999999999999986543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.89  E-value=4.8e-23  Score=145.83  Aligned_cols=129  Identities=18%  Similarity=0.298  Sum_probs=107.5

Q ss_pred             CCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..     .+++|.+...  ......+.+.+|+.++..+ +||||+++++++...+..+++|||
T Consensus        30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~  107 (327)
T 1fvr_A           30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY  107 (327)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             eeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEec
Confidence            4679999999999999865     2589988753  3344566788999999999 999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccc
Q psy697           76 CNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILA  140 (157)
Q Consensus        76 ~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~  140 (157)
                      +++|+|.+++...+               ..+++..+..++.|++.                      +|.++|+++++|
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH  165 (327)
T 1fvr_A          108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR----------------------GMDYLSQKQFIH  165 (327)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHH----------------------HHHHHHHTTEEC
T ss_pred             CCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHH----------------------HHHHHHhCCccC
Confidence            99999999997643               25889999999998877                      778888899999


Q ss_pred             cCCCCccccccccc
Q psy697          141 RSPSHPLNLSRSAE  154 (157)
Q Consensus       141 rd~k~~~~~~~~~~  154 (157)
                      ||+|+.|++.....
T Consensus       166 ~dlkp~NIl~~~~~  179 (327)
T 1fvr_A          166 RDLAARNILVGENY  179 (327)
T ss_dssp             SCCSGGGEEECGGG
T ss_pred             CCCccceEEEcCCC
Confidence            99999999986543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.89  E-value=3.3e-23  Score=143.21  Aligned_cols=128  Identities=21%  Similarity=0.199  Sum_probs=111.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+....  .....+.+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus        12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   89 (276)
T 2yex_A           12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG   89 (276)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG--CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EEEeecCCCcEEEEEEECCCCcEEEEEEeeecc--chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCC
Confidence            4689999999999999854   49999997643  224467788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... .+++..+..++.|++.                      +|+++|+++++|||+++.|++....+
T Consensus        90 ~~L~~~l~~~~-~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~~~  142 (276)
T 2yex_A           90 GELFDRIEPDI-GMPEPDAQRFFHQLMA----------------------GVVYLHGIGITHRDIKPENLLLDERD  142 (276)
T ss_dssp             EEGGGGSBTTT-BCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECTTC
T ss_pred             CcHHHHHhhcc-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCChHHEEEccCC
Confidence            99999998654 6899999999998777                      78888999999999999999987644

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.89  E-value=2.5e-23  Score=152.04  Aligned_cols=129  Identities=16%  Similarity=0.167  Sum_probs=105.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCC-----CHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD-----DEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|....   .+|+|++......     .......+.+|+.++..++||||+++++++.. +..+++|
T Consensus       140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~  218 (419)
T 3i6u_A          140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVL  218 (419)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEE
T ss_pred             EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEE
Confidence            4679999999999999865   4999999764311     11223357889999999999999999998754 4579999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+++|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus       219 e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------~l~~LH~~~ivHrDlkp~NIll~~~  275 (419)
T 3i6u_A          219 ELMEGGELFDKVVGNK-RLKEATCKLYFYQMLL----------------------AVQYLHENGIIHRDLKPENVLLSSQ  275 (419)
T ss_dssp             ECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEESSS
T ss_pred             EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCChHhEEEecC
Confidence            9999999999988655 7999999999998877                      8888999999999999999998654


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       276 ~  276 (419)
T 3i6u_A          276 E  276 (419)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.89  E-value=8.6e-23  Score=142.34  Aligned_cols=126  Identities=19%  Similarity=0.301  Sum_probs=105.8

Q ss_pred             ccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            4 RIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .||+|+||.||+|.+..     .+|+|.+.... .+....+.+.+|+.++..++||||+++++++ ..+..+++|||+++
T Consensus        24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~  101 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL  101 (291)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred             ccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence            79999999999997632     49999997653 3344577899999999999999999999998 56678999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       102 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------~l~~LH~~~i~H~dikp~Nil~~~~~  154 (291)
T 1xbb_A          102 GPLNKYLQQNR-HVKDKNIIELVHQVSM----------------------GMKYLEESNFVHRDLAARNVLLVTQH  154 (291)
T ss_dssp             EEHHHHHHHCT-TCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEEEETT
T ss_pred             CCHHHHHHhCc-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEcCCCCcceEEEeCCC
Confidence            99999998754 6999999999998877                      78888889999999999999886543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.89  E-value=4.1e-23  Score=148.28  Aligned_cols=123  Identities=14%  Similarity=0.183  Sum_probs=103.4

Q ss_pred             CCccccCceeeEEEEEE-----ec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC---CCceeeeeeEEecCCceE
Q psy697            2 GDRIGKGHFGTVYNGNW-----HG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR---HENLVLFMGACMKPPHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~-----~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~   70 (157)
                      .+.||+|+||.||+|.+     ..   .+|+|.+...   .   ...+..|..++..+.   |+|++.+++++...+..+
T Consensus        70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~  143 (365)
T 3e7e_A           70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---N---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV  143 (365)
T ss_dssp             EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---C---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred             EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---C---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence            35799999999999952     21   4999999763   2   345667777777775   899999999999999999


Q ss_pred             EEEecCCCCCHhHHHhhh----cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCc
Q psy697           71 IVTSKCNGHTLYTNIHIY----KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP  146 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~  146 (157)
                      ++|||+++|+|.+++...    ...+++..+..++.|++.                      +|+++|+++|+|||+|+.
T Consensus       144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~----------------------~L~~lH~~~ivHrDiKp~  201 (365)
T 3e7e_A          144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLY----------------------MIEQVHDCEIIHGDIKPD  201 (365)
T ss_dssp             EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECCCCSGG
T ss_pred             EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHH----------------------HHHHHhhCCeecCCCCHH
Confidence            999999999999999852    236999999999998888                      888889999999999999


Q ss_pred             cccccc
Q psy697          147 LNLSRS  152 (157)
Q Consensus       147 ~~~~~~  152 (157)
                      |++...
T Consensus       202 NIll~~  207 (365)
T 3e7e_A          202 NFILGN  207 (365)
T ss_dssp             GEEECG
T ss_pred             HEEecc
Confidence            999876

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.89  E-value=6.3e-23  Score=145.43  Aligned_cols=125  Identities=18%  Similarity=0.186  Sum_probs=107.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|....   .+|+|.+.....     .+.+..|+.++..+ +|||++++++++...+..+++|||+ 
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-   87 (330)
T 2izr_A           14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-   87 (330)
T ss_dssp             EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred             EEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence            4689999999999999744   499999875431     23477899999999 9999999999999999999999999 


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~LH~~~iiHrDlkp~Nill~~~~  142 (330)
T 2izr_A           88 GPSLEDLFDLCDRTFSLKTVLMIAIQLIS----------------------RMEYVHSKNLIYRDVKPENFLIGRPG  142 (330)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECCGG
T ss_pred             CCCHHHHHHHcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeccCCCHHHeeeccCC
Confidence            99999999875557999999999998888                      88889999999999999999987654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.89  E-value=2.2e-23  Score=156.43  Aligned_cols=126  Identities=25%  Similarity=0.355  Sum_probs=108.1

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|.+.+  .+|+|.+....    ...+.+.+|+.+++.++||||+++++++.. +.++++|||+++|
T Consensus       272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~g  346 (535)
T 2h8h_A          272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG  346 (535)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred             heecccCCCeEEEEEEECCCceEEEEEeCCCC----CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCC
Confidence            4679999999999999876  49999997643    224678999999999999999999998866 6789999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++.... ..+++.++..++.|++.                      +|+++|+++++|||+|+.|+|.....
T Consensus       347 sL~~~l~~~~~~~l~~~~~~~i~~qi~~----------------------~L~~LH~~~ivHrDlkp~NIll~~~~  400 (535)
T 2h8h_A          347 SLLDFLKGETGKYLRLPQLVDMAAQIAS----------------------GMAYVERMNYVHRDLRAANILVGENL  400 (535)
T ss_dssp             EHHHHHSHHHHTTCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             cHHHHHhhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeCCCCCHhhEEEcCCC
Confidence            9999998642 35899999999998888                      88888999999999999999986543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.89  E-value=6.1e-23  Score=142.82  Aligned_cols=130  Identities=27%  Similarity=0.468  Sum_probs=102.6

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..      .+|+|.+...........+.+.+|+.++..++|||++++++++.... .++++||
T Consensus        23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~  101 (291)
T 1u46_A           23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL  101 (291)
T ss_dssp             EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred             eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence            4679999999999998743      38999987654334456778899999999999999999999987765 8899999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.+++...+..+++..+..++.|++.                      +|.++|+++++|||+|+.|++....+
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dikp~Nili~~~~  158 (291)
T 1u46_A          102 APLGSLLDRLRKHQGHFLLGTLSRYAVQVAE----------------------GMGYLESKRFIHRDLAARNLLLATRD  158 (291)
T ss_dssp             CTTCBHHHHHHHHGGGSCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEEEETT
T ss_pred             ccCCCHHHHHHhccCCcCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCchheEEEcCCC
Confidence            9999999999876557999999999998777                      77888889999999999999986543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.89  E-value=1.2e-22  Score=141.21  Aligned_cols=129  Identities=24%  Similarity=0.315  Sum_probs=106.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHH----HHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTW----EAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~----~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+...........    +.+.+|+.++..++||||+++++++....  +++||
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e  101 (287)
T 4f0f_A           24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME  101 (287)
T ss_dssp             EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred             hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence            4679999999999999854   599999876432222111    67889999999999999999999886654  69999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc--ccccCCCCccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR--ILARSPSHPLNLSRS  152 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~--~~~rd~k~~~~~~~~  152 (157)
                      |+++|+|.+.+......+++..+..++.|++.                      +++++|+++  ++|||+|+.|++...
T Consensus       102 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~----------------------~l~~lH~~~~~ivH~dikp~Nil~~~  159 (287)
T 4f0f_A          102 FVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL----------------------GIEYMQNQNPPIVHRDLRSPNIFLQS  159 (287)
T ss_dssp             CCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHH----------------------HHHHHHTSSSCCBCSCCSGGGEEESC
T ss_pred             ecCCCCHHHHHhcccCCccHHHHHHHHHHHHH----------------------HHHHHHhCCCCeecCCCCcceEEEec
Confidence            99999999988776557999999999998888                      777788888  999999999999865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      .+
T Consensus       160 ~~  161 (287)
T 4f0f_A          160 LD  161 (287)
T ss_dssp             CC
T ss_pred             cC
Confidence            44

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.89  E-value=8.3e-23  Score=145.59  Aligned_cols=125  Identities=13%  Similarity=0.186  Sum_probs=109.1

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC--CceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH--ENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||++....  .+|+|.+.... .+....+.+.+|+.++..++|  |||+++++++...+.++++|| +.
T Consensus        14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~   91 (343)
T 3dbq_A           14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG   91 (343)
T ss_dssp             EEEESCCSSEEEEEEECTTSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred             EEEEecCCCeEEEEEEeCCCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CC
Confidence            5789999999999998754  49999998654 455667788999999999976  999999999999999999999 56


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..
T Consensus        92 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------al~~lH~~~iiHrDikp~NIll~  142 (343)
T 3dbq_A           92 NIDLNSWLKKKK-SIDPWERKSYWKNMLE----------------------AVHTIHQHGIVHSDLKPANFLIV  142 (343)
T ss_dssp             SEEHHHHHHHSC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEEE
T ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCcceEEEE
Confidence            889999998755 7999999999987777                      78888999999999999999875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.89  E-value=2.5e-23  Score=145.55  Aligned_cols=129  Identities=22%  Similarity=0.217  Sum_probs=103.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCC-----------------------HHHHHHHHHHHHHHHhcCCCc
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDD-----------------------EKTWEAFKLEVTTFRKTRHEN   55 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~-----------------------~~~~~~~~~e~~~l~~l~h~n   55 (157)
                      .+.||+|+||.||+|....   .+|+|.+.......                       ....+.+.+|+.+++.++|||
T Consensus        18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   97 (298)
T 2zv2_A           18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN   97 (298)
T ss_dssp             EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred             EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence            4689999999999998754   49999997643111                       112356889999999999999


Q ss_pred             eeeeeeEEec--CCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697           56 LVLFMGACMK--PPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus        56 iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      |+++++++..  .+.++++|||+++++|.+++..  ..+++..+..++.|++.                      +|+++
T Consensus        98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~----------------------~l~~l  153 (298)
T 2zv2_A           98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIK----------------------GIEYL  153 (298)
T ss_dssp             BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHH----------------------HHHHH
T ss_pred             CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHH----------------------HHHHH
Confidence            9999999986  5678999999999999887653  26899999999998777                      88888


Q ss_pred             ccccccccCCCCccccccccc
Q psy697          134 PKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       134 ~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++++|||+|+.|++....+
T Consensus       154 H~~~ivH~Dlkp~Nil~~~~~  174 (298)
T 2zv2_A          154 HYQKIIHRDIKPSNLLVGEDG  174 (298)
T ss_dssp             HHTTEECCCCCGGGEEECTTS
T ss_pred             HHCCeeccCCCHHHEEECCCC
Confidence            999999999999999986543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.89  E-value=2.7e-23  Score=146.96  Aligned_cols=129  Identities=22%  Similarity=0.293  Sum_probs=107.5

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|....  .+|+|.+....  .......+.+|+.++..++||||+++++++...+..+++|||+++|
T Consensus        35 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  112 (326)
T 3uim_A           35 KNILGRGGFGKVYKGRLADGTLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG  112 (326)
T ss_dssp             TTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTC
T ss_pred             ceeEecCCCcEEEEEEecCCCEEEEEEecccc--CchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCC
Confidence            5789999999999998644  59999997642  1222336889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc---cccccCCCCcccccccc
Q psy697           80 TLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK---RILARSPSHPLNLSRSA  153 (157)
Q Consensus        80 ~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~---~~~~rd~k~~~~~~~~~  153 (157)
                      +|.+++....   ..+++..+..++.|++.                      +|+++|++   +++|||+|+.|++....
T Consensus       113 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lH~~~~~~ivH~Dlkp~Nil~~~~  170 (326)
T 3uim_A          113 SVASCLRERPESQPPLDWPKRQRIALGSAR----------------------GLAYLHDHCDPKIIHRDVKAANILLDEE  170 (326)
T ss_dssp             BHHHHHHCCSTTCCCCCHHHHHHHHHHHHH----------------------HHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred             CHHHHHHhccccCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence            9999998643   24899999999998888                      77778887   99999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       171 ~  171 (326)
T 3uim_A          171 F  171 (326)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.89  E-value=7.5e-23  Score=142.38  Aligned_cols=128  Identities=23%  Similarity=0.264  Sum_probs=111.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ......+.+.+|+.++..++||||+++++++...+..+++|||+++
T Consensus        27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  105 (287)
T 2wei_A           27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG  105 (287)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-BSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCC
Confidence            4689999999999999853   59999997643 2233467788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|.+.+...+ .+++..+..++.|++.                      +|+++|+++++|||+++.|++..+.
T Consensus       106 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------~l~~LH~~~i~H~dl~p~NIlv~~~  157 (287)
T 2wei_A          106 GELFDEIIKRK-RFSEHDAARIIKQVFS----------------------GITYMHKHNIVHRDLKPENILLESK  157 (287)
T ss_dssp             CBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEESCS
T ss_pred             CCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCChhhEEEecC
Confidence            99999988755 7999999999998777                      7888888999999999999998654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.89  E-value=4.5e-24  Score=150.37  Aligned_cols=129  Identities=47%  Similarity=0.832  Sum_probs=111.7

Q ss_pred             CCCccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      +.+.||+|+||.||+|.+.+.+++|.+.... .+....+.+.+|+.++..++|||++++++++...+..+++|||+++++
T Consensus        37 ~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~  115 (319)
T 2y4i_B           37 IGELIGKGRFGQVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT  115 (319)
T ss_dssp             CCCBCCCSSSSEEEEEEESSSEEEEECCCCS-CCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred             EeeEeccCCceEEEEEEEcCeEEEEEeecCC-CCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence            4678999999999999998899999997653 222334456788999999999999999999999999999999999999


Q ss_pred             HhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           81 LYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        81 L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       116 L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------al~~lH~~~i~H~dlkp~NIl~~~  165 (319)
T 2y4i_B          116 LYSVVRDAKIVLDVNKTRQIAQEIVK----------------------GMGYLHAKGILHKDLKSKNVFYDN  165 (319)
T ss_dssp             HHHHTTSSCCCCCSHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCSTTEEEC-
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccccCCChhhEEEeC
Confidence            99999876556899999999998888                      778888889999999999999863

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.89  E-value=1.2e-23  Score=148.88  Aligned_cols=128  Identities=21%  Similarity=0.326  Sum_probs=105.5

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..       .+++|.+....  .....+.+.+|+.++..++||||+++++++. .+..+++||
T Consensus        18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e   94 (325)
T 3kex_A           18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQ   94 (325)
T ss_dssp             EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEE
T ss_pred             eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEE
Confidence            4679999999999999854       27788775432  1222345677899999999999999999886 456899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~Dikp~Nil~~~~~  152 (325)
T 3kex_A           95 YLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK----------------------GMYYLEEHGMVHRNLAARNVLLKSPS  152 (325)
T ss_dssp             CCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSSTTEEESSSS
T ss_pred             eCCCCCHHHHHHHccccCCHHHHHHHHHHHHH----------------------HHHHHHhCCCCCCccchheEEECCCC
Confidence            99999999999876557999999999998887                      78888889999999999999986644

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.89  E-value=1.1e-22  Score=147.33  Aligned_cols=126  Identities=13%  Similarity=0.183  Sum_probs=109.1

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC--CCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR--HENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||++....  .+|+|.+.... .+....+.+.+|+.++..+.  ||||+++++++...+.++++|| +.
T Consensus        61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~  138 (390)
T 2zmd_A           61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG  138 (390)
T ss_dssp             EEEEECCSSEEEEEEECTTCCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred             EEEEccCCCeEEEEEEcCCCCEEEEEEEeccc-ccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence            4689999999999998754  49999998754 45566788999999999996  5999999999999999999999 66


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +++|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|..+
T Consensus       139 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------aL~~lH~~~ivHrDlkp~NIll~~  190 (390)
T 2zmd_A          139 NIDLNSWLKKKK-SIDPWERKSYWKNMLE----------------------AVHTIHQHGIVHSDLKPANFLIVD  190 (390)
T ss_dssp             SEEHHHHHHHCS-SCCHHHHHHHHHHHHH----------------------HHHHHHTTTCCCCCCCGGGEEESS
T ss_pred             CCCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCCHHHEEEEC
Confidence            889999998765 7899899888887777                      788888899999999999999853

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.89  E-value=1.5e-22  Score=142.41  Aligned_cols=130  Identities=22%  Similarity=0.377  Sum_probs=105.7

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC-----ceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP-----HLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-----~~~   70 (157)
                      ++.||+|+||.||+|....      .+|+|.+.... ......+.+.+|+.++..++||||+++++++....     ..+
T Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~  117 (313)
T 3brb_A           39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM  117 (313)
T ss_dssp             EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred             ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-cchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence            4679999999999998754      49999997654 44556778999999999999999999999987754     459


Q ss_pred             EEEecCCCCCHhHHHhhh-----cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCC
Q psy697           71 IVTSKCNGHTLYTNIHIY-----KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSH  145 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~  145 (157)
                      ++|||+++|+|.+++...     ...+++..+..++.|++.                      +|.++|+++++|||+|+
T Consensus       118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~dikp  175 (313)
T 3brb_A          118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL----------------------GMEYLSNRNFLHRDLAA  175 (313)
T ss_dssp             EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHH----------------------HHHHHHTTTCCCCCCSG
T ss_pred             EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCc
Confidence            999999999999998532     236899999999998888                      77788888999999999


Q ss_pred             ccccccccc
Q psy697          146 PLNLSRSAE  154 (157)
Q Consensus       146 ~~~~~~~~~  154 (157)
                      .|++.....
T Consensus       176 ~NIli~~~~  184 (313)
T 3brb_A          176 RNCMLRDDM  184 (313)
T ss_dssp             GGEEECTTS
T ss_pred             ceEEEcCCC
Confidence            999987653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.89  E-value=7.8e-23  Score=142.80  Aligned_cols=127  Identities=20%  Similarity=0.222  Sum_probs=108.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-------------
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-------------   65 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------------   65 (157)
                      .+.||+|+||.||+|....   .+|+|.+..    .....+.+.+|+.++..++|||++++++++..             
T Consensus        11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   86 (303)
T 1zy4_A           11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKK   86 (303)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEE----EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------C
T ss_pred             hheeccCCcEEEEEEEEcCCCeEEEEEEEec----cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccccc
Confidence            4689999999999999753   599999964    34556788999999999999999999998754             


Q ss_pred             CCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCC
Q psy697           66 PPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSH  145 (157)
Q Consensus        66 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~  145 (157)
                      .+..+++|||+++|+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~l~~LH~~~i~H~dlkp  144 (303)
T 1zy4_A           87 KSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE----------------------ALSYIHSQGIIHRDLKP  144 (303)
T ss_dssp             EEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCG
T ss_pred             CCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHH----------------------HHHHHHhCCeecccCCH
Confidence            35689999999999999999876556888888888887777                      78888889999999999


Q ss_pred             ccccccccc
Q psy697          146 PLNLSRSAE  154 (157)
Q Consensus       146 ~~~~~~~~~  154 (157)
                      .|++.....
T Consensus       145 ~Nil~~~~~  153 (303)
T 1zy4_A          145 MNIFIDESR  153 (303)
T ss_dssp             GGEEECTTS
T ss_pred             HhEEEcCCC
Confidence            999986544

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.89  E-value=2.2e-23  Score=148.24  Aligned_cols=130  Identities=18%  Similarity=0.226  Sum_probs=109.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCH-----HHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE-----KTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+........     .....+.+|+.++..++||||+++++++...+..+++|
T Consensus        29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~  108 (335)
T 3dls_A           29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM  108 (335)
T ss_dssp             EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence            4679999999999998755   499999987542111     12345677999999999999999999999999999999


Q ss_pred             ecCCCC-CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           74 SKCNGH-TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        74 e~~~~g-~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ||+.+| +|.+++...+ .+++..+..++.|++.                      +|+++|.++++|||+|+.|++...
T Consensus       109 e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~----------------------~L~~LH~~~ivH~Dlkp~NIll~~  165 (335)
T 3dls_A          109 EKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVS----------------------AVGYLRLKDIIHRDIKDENIVIAE  165 (335)
T ss_dssp             ECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECT
T ss_pred             EeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeEEeccCHHHEEEcC
Confidence            999776 9999998755 7999999999998877                      888889999999999999999865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       166 ~~  167 (335)
T 3dls_A          166 DF  167 (335)
T ss_dssp             TS
T ss_pred             CC
Confidence            43

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.89  E-value=6.5e-23  Score=145.34  Aligned_cols=128  Identities=20%  Similarity=0.318  Sum_probs=107.8

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..       ++++|.+...  ......+.+.+|+.++..++||||+++++++.... .++++|
T Consensus        20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~   96 (327)
T 3lzb_A           20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQ   96 (327)
T ss_dssp             EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC--SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEEC
T ss_pred             EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc--cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEE
Confidence            4689999999999999754       2577777543  23345677889999999999999999999988765 789999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+.+|+|.+++...+..+++..+..++.|++.                      +|.++|+++++|||+|+.|++..+.+
T Consensus        97 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~Dikp~NIl~~~~~  154 (327)
T 3lzb_A           97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK----------------------GMNYLEDRRLVHRDLAARNVLVKTPQ  154 (327)
T ss_dssp             CCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEEEETT
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHhhCCCcCCCCCHHHEEEcCCC
Confidence            99999999999886657999999999998777                      88888999999999999999986543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.89  E-value=1.6e-22  Score=154.88  Aligned_cols=128  Identities=26%  Similarity=0.349  Sum_probs=109.5

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ++.||+|+||.||+|.+..      .+|+|.+...  ......+.+.+|+.++..++||||+++++++. .+..+++|||
T Consensus       395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~  471 (656)
T 2j0j_A          395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMEL  471 (656)
T ss_dssp             EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred             eeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEc
Confidence            4679999999999999843      3889988754  34556778999999999999999999999884 5668999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+|.++++..+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus       472 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~----------------------aL~~LH~~givHrDikp~NILl~~~~  528 (656)
T 2j0j_A          472 CTLGELRSFLQVRKFSLDLASLILYAYQLST----------------------ALAYLESKRFVHRDIAARNVLVSSND  528 (656)
T ss_dssp             CTTCBHHHHHHHTTTTCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             CCCCcHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCccccccchHhEEEeCCC
Confidence            9999999999876556899999999998888                      88888999999999999999987543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.89  E-value=1.3e-22  Score=140.54  Aligned_cols=130  Identities=20%  Similarity=0.226  Sum_probs=108.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--CCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--PPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~   76 (157)
                      .+.||+|+||.||++....   .+++|.+.... .+....+.+.+|+.++..++||||+++++++..  ...++++|||+
T Consensus        11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~   89 (279)
T 2w5a_A           11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC   89 (279)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred             ehhccCCCCcEEEEEEECCCCcEEEEEEEEccc-CCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence            4689999999999999854   49999998754 455667889999999999999999999998754  57899999999


Q ss_pred             CCCCHhHHHhhhc---ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc-----ccccCCCCccc
Q psy697           77 NGHTLYTNIHIYK---EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR-----ILARSPSHPLN  148 (157)
Q Consensus        77 ~~g~L~~~i~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~-----~~~rd~k~~~~  148 (157)
                      ++++|.+++....   ..+++..+..++.|++.                      +|+++|+++     ++|||+++.|+
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lH~~~~~~~~ivH~dl~p~NI  147 (279)
T 2w5a_A           90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTL----------------------ALKECHRRSDGGHTVLHRDLKPANV  147 (279)
T ss_dssp             TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHHC------CCCCCSGGGE
T ss_pred             CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHH----------------------HHHHHhcccCCCCeeEEeccchhhE
Confidence            9999999998643   24899999999998888                      666677766     99999999999


Q ss_pred             cccccc
Q psy697          149 LSRSAE  154 (157)
Q Consensus       149 ~~~~~~  154 (157)
                      +.....
T Consensus       148 l~~~~~  153 (279)
T 2w5a_A          148 FLDGKQ  153 (279)
T ss_dssp             EECSSS
T ss_pred             EEcCCC
Confidence            987554

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.89  E-value=6.7e-23  Score=141.39  Aligned_cols=127  Identities=28%  Similarity=0.430  Sum_probs=102.9

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCC-HHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDD-EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|.+.+ .+|+|.+....... ....+.+.+|+.++..++|||++++++++...+..+++|||++++
T Consensus        12 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   91 (271)
T 3dtc_A           12 EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGG   91 (271)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTE
T ss_pred             eeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCC
Confidence            4689999999999999876 59999987643111 223567889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc---ccccCCCCccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR---ILARSPSHPLNLSRS  152 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~---~~~rd~k~~~~~~~~  152 (157)
                      +|.+++...  .+++..+..++.|++.                      +|.++|+++   ++|||+|+.|++...
T Consensus        92 ~L~~~~~~~--~~~~~~~~~i~~~l~~----------------------~l~~lH~~~~~~i~H~dikp~Nil~~~  143 (271)
T 3dtc_A           92 PLNRVLSGK--RIPPDILVNWAVQIAR----------------------GMNYLHDEAIVPIIHRDLKSSNILILQ  143 (271)
T ss_dssp             EHHHHHTSS--CCCHHHHHHHHHHHHH----------------------HHHHHHHSSSSCCCCSCCSGGGEEESS
T ss_pred             CHHHHhhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCCCceeecCCchHHEEEec
Confidence            999998643  6899999999998888                      777777777   889999999999864

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.89  E-value=8.2e-23  Score=144.36  Aligned_cols=129  Identities=17%  Similarity=0.165  Sum_probs=104.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCC-----CHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD-----DEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+......     .......+.+|+.++..++||||+++++++.... .+++|
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~   93 (322)
T 2ycf_A           15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL   93 (322)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred             eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence            4689999999999999865   4999999764311     1122345788999999999999999999987655 89999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+++++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus        94 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~dlkp~NIl~~~~  150 (322)
T 2ycf_A           94 ELMEGGELFDKVVGNK-RLKEATCKLYFYQMLL----------------------AVQYLHENGIIHRDLKPENVLLSSQ  150 (322)
T ss_dssp             ECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEESSS
T ss_pred             ecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCCHHHEEEecC
Confidence            9999999999998655 7999999999987777                      8888899999999999999998764


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       151 ~  151 (322)
T 2ycf_A          151 E  151 (322)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.89  E-value=2.7e-22  Score=140.09  Aligned_cols=130  Identities=18%  Similarity=0.169  Sum_probs=110.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCC--C----HHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD--D----EKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~--~----~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l   71 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+......  .    ....+.+.+|+.++.++. ||||+++++++...+..++
T Consensus        22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l  101 (298)
T 1phk_A           22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL  101 (298)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence            4679999999999999865   4999999764311  1    233567889999999995 9999999999999999999


Q ss_pred             EEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           72 VTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +|||+++++|.+++.... .+++..+..++.|++.                      +|+++|+++++|+|+++.|++..
T Consensus       102 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~Nil~~  158 (298)
T 1phk_A          102 VFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLE----------------------VICALHKLNIVHRDLKPENILLD  158 (298)
T ss_dssp             EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEEC
T ss_pred             EEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCcceEEEc
Confidence            999999999999998755 7999999999998777                      78888889999999999999986


Q ss_pred             ccc
Q psy697          152 SAE  154 (157)
Q Consensus       152 ~~~  154 (157)
                      ...
T Consensus       159 ~~~  161 (298)
T 1phk_A          159 DDM  161 (298)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=2e-22  Score=145.82  Aligned_cols=127  Identities=18%  Similarity=0.163  Sum_probs=100.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCC--ceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPP--HLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ......+.+.+|+.++..+. ||||+++++++...+  .++++|||
T Consensus        14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~   92 (388)
T 3oz6_A           14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY   92 (388)
T ss_dssp             EEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEEC
T ss_pred             EEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecc
Confidence            5789999999999998854   49999997654 45666778889999999996 999999999997643  68999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++ ++|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        93 ~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~----------------------~L~~LH~~~ivHrDlkp~NIll~~~~  146 (388)
T 3oz6_A           93 ME-TDLHAVIRAN--ILEPVHKQYVVYQLIK----------------------VIKYLHSGGLLHRDMKPSNILLNAEC  146 (388)
T ss_dssp             CS-EEHHHHHHHT--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             cC-cCHHHHHHcC--CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEeCCCCHHHeEEcCCC
Confidence            97 5899998753  6899999988887777                      88889999999999999999987654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.88  E-value=1.8e-22  Score=141.94  Aligned_cols=129  Identities=25%  Similarity=0.410  Sum_probs=107.9

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCC-ceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPP-HLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~-~~~l   71 (157)
                      .+.||+|+||.||+|.+.+        .+|+|.+...  ......+.+.+|+.++..+ +||||+++++++...+ .+++
T Consensus        32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~l  109 (316)
T 2xir_A           32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV  109 (316)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred             eeEEcCCCceeEEEEEEecCCccccceEEEEEecccC--CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEE
Confidence            4679999999999998632        4999999765  3455567889999999999 7899999999987754 5899


Q ss_pred             EEecCCCCCHhHHHhhhccc---------------CCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697           72 VTSKCNGHTLYTNIHIYKEK---------------FALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~---------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +|||+++|+|.+++......               +++..+..++.|++.                      +|.++|++
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~  167 (316)
T 2xir_A          110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK----------------------GMEFLASR  167 (316)
T ss_dssp             EEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHH----------------------HHHHHHHT
T ss_pred             EEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHH----------------------HHHHHHhC
Confidence            99999999999999875421               788888899887777                      77788888


Q ss_pred             cccccCCCCccccccccc
Q psy697          137 RILARSPSHPLNLSRSAE  154 (157)
Q Consensus       137 ~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|||+|+.|++..+..
T Consensus       168 ~i~H~dikp~Nil~~~~~  185 (316)
T 2xir_A          168 KCIHRDLAARNILLSEKN  185 (316)
T ss_dssp             TCCCSCCSGGGEEECGGG
T ss_pred             CcccccCccceEEECCCC
Confidence            999999999999986543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.88  E-value=4.5e-23  Score=144.15  Aligned_cols=129  Identities=17%  Similarity=0.216  Sum_probs=95.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+....  .....+.+.+|+..+..++||||+++++++...+..+++|||+++
T Consensus        20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   97 (303)
T 2vwi_A           20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG   97 (303)
T ss_dssp             EEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTT
T ss_pred             hheeccccceEEEEEEECCCCcEEEEEEEEhhh--cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccC
Confidence            4689999999999998743   59999987542  233456788899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhh-------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           79 HTLYTNIHIY-------KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        79 g~L~~~i~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      ++|.+++...       ...+++..+..++.|++.                      +|.++|+++++|||+++.|++..
T Consensus        98 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~dl~p~Nil~~  155 (303)
T 2vwi_A           98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE----------------------GLEYLHKNGQIHRDVKAGNILLG  155 (303)
T ss_dssp             CBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCSGGGEEEC
T ss_pred             CchHHHHHHHhhccccccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCCCCCCCChhhEEEc
Confidence            9999998751       235899999999998887                      77888889999999999999986


Q ss_pred             ccc
Q psy697          152 SAE  154 (157)
Q Consensus       152 ~~~  154 (157)
                      ...
T Consensus       156 ~~~  158 (303)
T 2vwi_A          156 EDG  158 (303)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.88  E-value=1.6e-22  Score=141.59  Aligned_cols=127  Identities=21%  Similarity=0.324  Sum_probs=110.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+....  .....+.+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus        27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  104 (303)
T 3a7i_A           27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG  104 (303)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEETTT--CSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             hhhhcccCCeEEEEEEECCCCcEEEEEEecccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCC
Confidence            4679999999999998754   59999997653  233467789999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++...  .+++..+..++.|++.                      +|.++|+++++|||+++.|++.....
T Consensus       105 ~~L~~~~~~~--~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~~~  156 (303)
T 3a7i_A          105 GSALDLLEPG--PLDETQIATILREILK----------------------GLDYLHSEKKIHRDIKAANVLLSEHG  156 (303)
T ss_dssp             EEHHHHHTTS--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CcHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCccCCCChheEEECCCC
Confidence            9999999753  6899999999998777                      78888999999999999999986543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=1.4e-22  Score=145.72  Aligned_cols=127  Identities=17%  Similarity=0.171  Sum_probs=102.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC------ceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP------HLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv   72 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... .+....+.+.+|+.+++.++||||+++++++....      .++++
T Consensus        30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv  108 (367)
T 1cm8_A           30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV  108 (367)
T ss_dssp             EEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred             eEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEE
Confidence            4679999999999999854   49999997654 45566778899999999999999999999997653      46999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+ +++|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus       109 ~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~----------------------~L~~LH~~~ivH~Dlkp~NIll~~  163 (367)
T 1cm8_A          109 MPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLK----------------------GLRYIHAAGIIHRDLKPGNLAVNE  163 (367)
T ss_dssp             EECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECT
T ss_pred             EecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCcCHHHEEEcC
Confidence            9999 88999999763  6899999999887777                      888899999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       164 ~~  165 (367)
T 1cm8_A          164 DC  165 (367)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.88  E-value=1.7e-22  Score=145.19  Aligned_cols=130  Identities=17%  Similarity=0.210  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCC-C----HHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD-D----EKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~-~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   72 (157)
                      .+.||+|+||.||+|.+..   .+|||++...... .    ....+.+.+|+.++..+ +||||+++++++......+++
T Consensus        99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  178 (365)
T 2y7j_A           99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV  178 (365)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred             ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence            3679999999999999853   5999999764311 1    12356778999999999 899999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++++|.+++.... .+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       179 ~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~----------------------~L~~LH~~gi~H~Dlkp~NIl~~~  235 (365)
T 2y7j_A          179 FDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLE----------------------AVSFLHANNIVHRDLKPENILLDD  235 (365)
T ss_dssp             ECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECT
T ss_pred             EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEECC
Confidence            99999999999998755 7999999999998777                      888899999999999999999865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       236 ~~  237 (365)
T 2y7j_A          236 NM  237 (365)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.88  E-value=1.7e-23  Score=150.93  Aligned_cols=129  Identities=11%  Similarity=0.022  Sum_probs=101.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHH---HHHHhcCCCceeeee-------eEEecCC-
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEV---TTFRKTRHENLVLFM-------GACMKPP-   67 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~~~~~~-   67 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+...........+.+.+|+   ..+++++||||++++       +++...+ 
T Consensus        78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~  157 (377)
T 3byv_A           78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK  157 (377)
T ss_dssp             EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred             cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence            4689999999999999753   5999999865434455677888999   556666899999998       5555443 


Q ss_pred             ----------------ceEEEEecCCCCCHhHHHhhhcccCCH-------HHHHHHHHHHHHHHHHHhhcCCCCCCCCHH
Q psy697           68 ----------------HLAIVTSKCNGHTLYTNIHIYKEKFAL-------NKMSTVGQQISQDVLMKCWSYKPSDRPDFI  124 (157)
Q Consensus        68 ----------------~~~lv~e~~~~g~L~~~i~~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~  124 (157)
                                      ..+++|||+ +|+|.+++...+ .+++       ..+..++.|++.                  
T Consensus       158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~-~~~~~~~~l~~~~~~~i~~qi~~------------------  217 (377)
T 3byv_A          158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLL-SHSSTHKSLVHHARLQLTLQVIR------------------  217 (377)
T ss_dssp             CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHH-HTTTTTHHHHHHHHHHHHHHHHH------------------
T ss_pred             ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcc-ccccccccccHHHHHHHHHHHHH------------------
Confidence                            388999999 689999998754 3444       667777777776                  


Q ss_pred             HHHHHHhccccccccccCCCCccccccccc
Q psy697          125 TLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       125 ~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                          +|+++|+++|+|||+|+.|++....+
T Consensus       218 ----aL~~LH~~~ivHrDikp~NIll~~~~  243 (377)
T 3byv_A          218 ----LLASLHHYGLVHTYLRPVDIVLDQRG  243 (377)
T ss_dssp             ----HHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             ----HHHHHHhCCeecCCCCHHHEEEcCCC
Confidence                88889999999999999999987654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=5.9e-23  Score=146.15  Aligned_cols=131  Identities=21%  Similarity=0.269  Sum_probs=104.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCC--CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL--DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|....   .+|+|++.....  .+....+.+.+|+.++..++||||+++++++...+..+++|||+
T Consensus        31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~  110 (345)
T 3hko_A           31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC  110 (345)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCC
Confidence            4689999999999999855   489999865321  12345678899999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhh---------------------------------------cccCCHHHHHHHHHHHHHHHHHHhhcCCC
Q psy697           77 NGHTLYTNIHIY---------------------------------------KEKFALNKMSTVGQQISQDVLMKCWSYKP  117 (157)
Q Consensus        77 ~~g~L~~~i~~~---------------------------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  117 (157)
                      ++|+|.+++...                                       ...+++..+..++.|++.           
T Consensus       111 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~-----------  179 (345)
T 3hko_A          111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS-----------  179 (345)
T ss_dssp             CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH-----------
T ss_pred             CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH-----------
Confidence            999999998521                                       001244556666665555           


Q ss_pred             CCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697          118 SDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       118 ~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                                 +|+++|+++++|||+|+.|++....+
T Consensus       180 -----------~l~~LH~~~ivH~Dlkp~NIll~~~~  205 (345)
T 3hko_A          180 -----------ALHYLHNQGICHRDIKPENFLFSTNK  205 (345)
T ss_dssp             -----------HHHHHHHTTEECCCCCGGGEEESCSS
T ss_pred             -----------HHHHHHHCCccccCCChhhEEEecCC
Confidence                       88889999999999999999987544

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.88  E-value=2e-22  Score=140.84  Aligned_cols=123  Identities=24%  Similarity=0.401  Sum_probs=100.1

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHh--cCCCceeeeeeEEecC----CceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK--TRHENLVLFMGACMKP----PHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~----~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+.+ .+|+|.+...      ....+..|..++..  ++||||+++++++...    ..++++||
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e   86 (301)
T 3q4u_A           13 LECVGKGRYGEVWRGSWQGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITH   86 (301)
T ss_dssp             EEEEEECSSEEEEEEEETTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             EEeeccCCCcEEEEEEECCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehh
Confidence            4689999999999999866 4999998652      23344556666655  7999999999986543    45899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc--------cccccccCCCCc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP--------KKRILARSPSHP  146 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~--------~~~~~~rd~k~~  146 (157)
                      |+++|+|.++++..  .+++..+..++.|++.                      +|+++|        +++++|||+|+.
T Consensus        87 ~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~----------------------~l~~lH~~~~~~~~~~~ivH~Dlkp~  142 (301)
T 3q4u_A           87 YHEMGSLYDYLQLT--TLDTVSCLRIVLSIAS----------------------GLAHLHIEIFGTQGKPAIAHRDLKSK  142 (301)
T ss_dssp             CCTTCBHHHHHTTC--CBCHHHHHHHHHHHHH----------------------HHHHHHSCBCSTTCBCEEECSCCCGG
T ss_pred             hccCCCHHHHHhhc--ccCHHHHHHHHHHHHH----------------------HHHHHHHhhhhccCCCCeecCCCChH
Confidence            99999999999753  6899999999998888                      566666        889999999999


Q ss_pred             cccccccc
Q psy697          147 LNLSRSAE  154 (157)
Q Consensus       147 ~~~~~~~~  154 (157)
                      |++..+..
T Consensus       143 Nill~~~~  150 (301)
T 3q4u_A          143 NILVKKNG  150 (301)
T ss_dssp             GEEECTTS
T ss_pred             hEEEcCCC
Confidence            99987554

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.88  E-value=3.7e-22  Score=142.89  Aligned_cols=124  Identities=23%  Similarity=0.277  Sum_probs=107.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-----CCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-----HENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+..   .+|+|++..    .....+.+..|..++..+.     ||||+++++++...+..+++|
T Consensus        40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~  115 (360)
T 3llt_A           40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN----IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIF  115 (360)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECS----CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEE
T ss_pred             EEEEcccCCeEEEEEEECCCCeEEEEEEecc----chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEE
Confidence            4689999999999999844   499999974    2455667788999999886     999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           74 SKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ||+ +++|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       116 e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrDlkp~NIll~~  172 (360)
T 3llt_A          116 EPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILK----------------------ALNYLRKMSLTHTDLKPENILLDD  172 (360)
T ss_dssp             CCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEESC
T ss_pred             cCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeCCCCcccEEEcc
Confidence            999 899999998754 25899999999998777                      888889999999999999999864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.88  E-value=1.6e-22  Score=140.07  Aligned_cols=126  Identities=23%  Similarity=0.359  Sum_probs=106.8

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|...+  .+|+|.+....    ...+.+.+|+.++..++|||++++++++. .+..+++|||++++
T Consensus        18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~   92 (279)
T 1qpc_A           18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENG   92 (279)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTC
T ss_pred             eeeecCCCCeEEEEEEEcCCcEEEEEEecCCc----ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCC
Confidence            4679999999999999865  49999997643    23567889999999999999999999876 45689999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        93 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~dikp~Nil~~~~~  146 (279)
T 1qpc_A           93 SLVDFLKTPSGIKLTINKLLDMAAQIAE----------------------GMAFIEERNYIHRDLRAANILVSDTL  146 (279)
T ss_dssp             BHHHHTTSHHHHTCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECTTS
T ss_pred             CHHHHHhcCCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeccCCCHhhEEEcCCC
Confidence            9999998643 25899999999998887                      78888889999999999999986543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.88  E-value=2.1e-23  Score=147.69  Aligned_cols=128  Identities=19%  Similarity=0.228  Sum_probs=105.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+....  .......+.+|+.++..++||||+++++++...+..+++|||++ 
T Consensus         7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-   83 (324)
T 3mtl_A            7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-   83 (324)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-
T ss_pred             EEEEcCCCCEEEEEEEECCCCcEEEEEEEeccc--ccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-
Confidence            4689999999999999864   49999997542  11222244578999999999999999999999999999999997 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivH~Dikp~NIl~~~~~  137 (324)
T 3mtl_A           84 KDLKQYLDDCGNIINMHNVKLFLFQLLR----------------------GLAYCHRQKVLHRDLKPQNLLINERG  137 (324)
T ss_dssp             EEHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEEESSCCGGGEEECTTC
T ss_pred             cCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccCCCcCHHHEEECCCC
Confidence            5999998876656899999999987777                      88888999999999999999987654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.88  E-value=3.9e-22  Score=139.01  Aligned_cols=125  Identities=21%  Similarity=0.304  Sum_probs=106.1

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ..||+|+||.||+|.+..   .+|+|.+...   +....+.+.+|+.++..++||||+++++++...+..+++|||++++
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  104 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG  104 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECC---CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCC---chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence            379999999999999854   4999999764   3345677889999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcc--cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           80 TLYTNIHIYKE--KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        80 ~L~~~i~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +|.+++.....  .+++..+..++.|++.                      +|+++|+++++|+|+++.|++...
T Consensus       105 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~  157 (295)
T 2clq_A          105 SLSALLRSKWGPLKDNEQTIGFYTKQILE----------------------GLKYLHDNQIVHRDIKGDNVLINT  157 (295)
T ss_dssp             EHHHHHHHTTCCCTTCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEEET
T ss_pred             CHHHHHHhhccCCCccHHHHHHHHHHHHH----------------------HHHHHHhCCEEccCCChhhEEEEC
Confidence            99999987532  3567788888887777                      888889999999999999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.88  E-value=2.3e-22  Score=141.29  Aligned_cols=124  Identities=25%  Similarity=0.463  Sum_probs=103.9

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      .+.||+|+||.||++.+.+ .+|+|.+...     ...+.+.+|+.++..++||||+++++++.  +..+++|||+++|+
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~   85 (307)
T 2eva_A           13 EEVVGRGAFGVVCKAKWRAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGS   85 (307)
T ss_dssp             EEEEECCSSSEEEEEEETTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCB
T ss_pred             eeEeecCCCceEEEEEECCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCC
Confidence            4679999999999999876 5999998642     34677899999999999999999999876  34789999999999


Q ss_pred             HhHHHhhhcc--cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc---ccccccCCCCccccccccc
Q psy697           81 LYTNIHIYKE--KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK---KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        81 L~~~i~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~---~~~~~rd~k~~~~~~~~~~  154 (157)
                      |.+++...+.  .+++..+..++.|+++                      +|+++|+   ++++|||+|+.|++..+.+
T Consensus        86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~LH~~~~~~ivH~dlkp~NIll~~~~  142 (307)
T 2eva_A           86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQ----------------------GVAYLHSMQPKALIHRDLKPPNLLLVAGG  142 (307)
T ss_dssp             HHHHHHCSSSEECCCHHHHHHHHHHHHH----------------------HHHHHHTCSSSCCCCCCCSGGGEEEETTT
T ss_pred             HHHHHhccCCCCccCHHHHHHHHHHHHH----------------------HHHHHHhCCCCCeecCCCChhHEEEeCCC
Confidence            9999986431  4788888899888888                      6666776   7899999999999986543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.88  E-value=1.7e-22  Score=144.30  Aligned_cols=129  Identities=22%  Similarity=0.298  Sum_probs=107.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC--------CceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP--------PHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------~~~~   70 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ........+.+|+.++..++|||++++++++...        +.++
T Consensus        22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~  100 (351)
T 3mi9_A           22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY  100 (351)
T ss_dssp             EEECSSCSTTSEEEEEETTTCCEEEEEECCCSS-CSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEE
T ss_pred             EEEEecCCCcEEEEEEECCCCCEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEE
Confidence            4689999999999999854   59999987654 2333355678899999999999999999998773        4689


Q ss_pred             EEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           71 IVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ++|||+++ +|.+.+......+++..+..++.|++.                      +|+++|+++++|||+|+.|++.
T Consensus       101 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~l~~LH~~~ivH~Dlkp~NIl~  157 (351)
T 3mi9_A          101 LVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLN----------------------GLYYIHRNKILHRDMKAANVLI  157 (351)
T ss_dssp             EEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEE
T ss_pred             EEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeCCCCCHHHEEE
Confidence            99999975 787777765557999999999998777                      8888899999999999999998


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      .+..
T Consensus       158 ~~~~  161 (351)
T 3mi9_A          158 TRDG  161 (351)
T ss_dssp             CTTS
T ss_pred             cCCC
Confidence            7554

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.88  E-value=1.9e-22  Score=141.84  Aligned_cols=126  Identities=21%  Similarity=0.321  Sum_probs=105.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+....     ..+.+.+|+.++..++|||++++++++...+..+++|||+++
T Consensus        34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  108 (314)
T 3com_A           34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA  108 (314)
T ss_dssp             EEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             heeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCC
Confidence            4679999999999999864   49999997642     235678899999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++......+++..+..++.|++.                      +|.++|+++++|+|+++.|++....+
T Consensus       109 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lH~~~i~H~dl~p~Nil~~~~~  162 (314)
T 3com_A          109 GSVSDIIRLRNKTLTEDEIATILQSTLK----------------------GLEYLHFMRKIHRDIKAGNILLNTEG  162 (314)
T ss_dssp             EEHHHHHHHHTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCCcCCCcCHHHEEECCCC
Confidence            9999999865557999999999998777                      78888999999999999999986543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.87  E-value=2.8e-22  Score=148.16  Aligned_cols=126  Identities=17%  Similarity=0.204  Sum_probs=105.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      ++.||+|+||.||+|.+..   .+|+|.+.... ......+.+.+|+.+++.++||||+++++++...      ..++++
T Consensus        67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv  145 (464)
T 3ttj_A           67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV  145 (464)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred             EEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEE
Confidence            4679999999999998865   49999997653 4556677889999999999999999999999665      356999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++ ++.+.+..   .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++...
T Consensus       146 ~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~----------------------aL~~lH~~~iiHrDlkp~NIll~~  199 (464)
T 3ttj_A          146 MELMDA-NLCQVIQM---ELDHERMSYLLYQMLC----------------------GIKHLHSAGIIHRDLKPSNIVVKS  199 (464)
T ss_dssp             EECCSE-EHHHHHTS---CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             EeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCChHhEEEeC
Confidence            999975 56666653   5899999999887777                      888889999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       200 ~~  201 (464)
T 3ttj_A          200 DC  201 (464)
T ss_dssp             TS
T ss_pred             CC
Confidence            54

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.87  E-value=1.8e-22  Score=139.82  Aligned_cols=126  Identities=26%  Similarity=0.358  Sum_probs=105.8

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-CceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-PHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||++.+.+ .+|+|.+...     ...+.+.+|+.++..++|||++++++++... +..+++|||++++
T Consensus        26 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~  100 (278)
T 1byg_A           26 LQTIGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG  100 (278)
T ss_dssp             EEEEEECSSCEEEEEEETTEEEEEEECCCC-----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             EeEEecCCCceEEEEEEcCCEEEEEEecch-----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCC
Confidence            4679999999999999876 5999998753     2456788999999999999999999987654 5789999999999


Q ss_pred             CHhHHHhhhcc-cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKE-KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++...+. .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.....
T Consensus       101 ~L~~~l~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlkp~Nil~~~~~  154 (278)
T 1byg_A          101 SLVDYLRSRGRSVLGGDCLLKFSLDVCE----------------------AMEYLEGNNFVHRDLAARNVLVSEDN  154 (278)
T ss_dssp             EHHHHHHHHHHHHCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             CHHHHHHhcccccCCHHHHHHHHHHHHH----------------------HHHHHHhCCccccCCCcceEEEeCCC
Confidence            99999987542 3889999999998777                      77888888999999999999987543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=4.4e-23  Score=147.74  Aligned_cols=130  Identities=23%  Similarity=0.231  Sum_probs=107.8

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCC-CCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYL-DDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||++....      .+|+|++..... ........+.+|+.++..+ +||||+++++++...+..+++|
T Consensus        59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~  138 (355)
T 1vzo_A           59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL  138 (355)
T ss_dssp             EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred             EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence            4679999999999999831      499999865321 0112234466788899999 7999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+++|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus       139 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivH~Dlkp~NIll~~~  195 (355)
T 1vzo_A          139 DYINGGELFTHLSQRE-RFTEHEVQIYVGEIVL----------------------ALEHLHKLGIIYRDIKLENILLDSN  195 (355)
T ss_dssp             CCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEECCC
Confidence            9999999999998765 7999999999998777                      8888899999999999999998654


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       196 ~  196 (355)
T 1vzo_A          196 G  196 (355)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.87  E-value=8.6e-22  Score=141.77  Aligned_cols=126  Identities=18%  Similarity=0.197  Sum_probs=106.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC------ceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP------HLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv   72 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ........+.+|+.+++.++||||+++++++...+      ..+++
T Consensus        30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv  108 (371)
T 2xrw_A           30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV  108 (371)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred             eeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEE
Confidence            4679999999999998754   49999997654 44566778889999999999999999999997654      68999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++ +|.+.+..   .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus       109 ~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~----------------------al~~lH~~~ivH~Dlkp~NIl~~~  162 (371)
T 2xrw_A          109 MELMDA-NLCQVIQM---ELDHERMSYLLYQMLC----------------------GIKHLHSAGIIHRDLKPSNIVVKS  162 (371)
T ss_dssp             EECCSE-EHHHHHHS---CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             EEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHH----------------------HHHHHHHCCeecccCCHHHEEEcC
Confidence            999974 78888752   5899999999887777                      788889999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       163 ~~  164 (371)
T 2xrw_A          163 DC  164 (371)
T ss_dssp             TS
T ss_pred             CC
Confidence            54

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=1.5e-22  Score=144.45  Aligned_cols=130  Identities=19%  Similarity=0.179  Sum_probs=105.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCC--HHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDD--EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.......  ....+.+.+|+.++..++||||+++++++...+..+++|||+
T Consensus        15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   94 (346)
T 1ua2_A           15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   94 (346)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence            4689999999999999854   49999997543111  112346788999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++ +|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        95 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~Dlkp~Nil~~~~~  149 (346)
T 1ua2_A           95 ET-DLEVIIKDNSLVLTPSHIKAYMLMTLQ----------------------GLEYLHQHWILHRDLKPNNLLLDENG  149 (346)
T ss_dssp             SE-EHHHHHTTCCSSCCSSHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             CC-CHHHHHHhcCcCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEECCCCCHHHEEEcCCC
Confidence            76 899988876557899999999998777                      78888889999999999999986654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.87  E-value=9.2e-22  Score=138.40  Aligned_cols=123  Identities=16%  Similarity=0.151  Sum_probs=100.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEe--------------
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACM--------------   64 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--------------   64 (157)
                      .+.||+|+||.||+|....   .+|+|.+..   .+....+.+.+|+.++..++|||++++++++.              
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   92 (320)
T 2i6l_A           16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL---TDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT   92 (320)
T ss_dssp             EEECC-----CEEEEEETTTTEEEEEEEEEC---CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred             EEEeccCCCeEEEEEEECCCCeEEEEEEEec---CChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence            4679999999999999864   499999876   45666788999999999999999999998874              


Q ss_pred             cCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           65 KPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        65 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                      .....+++|||++ |+|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|
T Consensus        93 ~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlk  147 (320)
T 2i6l_A           93 ELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLR----------------------GLKYIHSANVLHRDLK  147 (320)
T ss_dssp             SCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCS
T ss_pred             ccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHH----------------------HHHHHHhCCEecCCCC
Confidence            3467899999997 6999998752  6899999999887777                      8888888999999999


Q ss_pred             Cccccccc
Q psy697          145 HPLNLSRS  152 (157)
Q Consensus       145 ~~~~~~~~  152 (157)
                      +.|++...
T Consensus       148 p~Nil~~~  155 (320)
T 2i6l_A          148 PANLFINT  155 (320)
T ss_dssp             GGGEEEET
T ss_pred             HHHEEEcC
Confidence            99999854

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.87  E-value=3.2e-22  Score=141.73  Aligned_cols=127  Identities=14%  Similarity=0.145  Sum_probs=109.1

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.||+|+||.||+|....   .+|+|.+.... ........+.+|+.++..+ .|||++++++++...+..+++|||+++
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~  113 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRR-RGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG  113 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEE-TTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhh-cchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence            679999999999999864   49999997654 2334466788999999999 569999999999999999999999999


Q ss_pred             CCHhHHHhhh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+++... ...+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       114 ~~L~~~~~~~~~~~~~~~~~~~i~~ql~~----------------------~L~~LH~~givH~Dikp~NIl~~~  166 (327)
T 3lm5_A          114 GEIFSLCLPELAEMVSENDVIRLIKQILE----------------------GVYYLHQNNIVHLDLKPQNILLSS  166 (327)
T ss_dssp             EEGGGGGSSCC-CCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEESC
T ss_pred             CcHHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCcCChHHEEEec
Confidence            9999998653 236899999999998777                      888899999999999999999876

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.87  E-value=8.7e-22  Score=136.93  Aligned_cols=129  Identities=16%  Similarity=0.160  Sum_probs=102.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ......+.+..+...++.++|||++++++++...+..+++|||++ 
T Consensus        12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-   89 (290)
T 3fme_A           12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV-NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-   89 (290)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEC----CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred             HHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc-CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence            4689999999999999854   49999997653 223333444444555777899999999999999999999999997 


Q ss_pred             CCHhHHHhh---hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCccccccccc
Q psy697           79 HTLYTNIHI---YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++..   .+..+++..+..++.|++.                      +|+++|++ +++|||+|+.|++.....
T Consensus        90 ~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~~i~H~dlkp~Nil~~~~~  147 (290)
T 3fme_A           90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVK----------------------ALEHLHSKLSVIHRDVKPSNVLINALG  147 (290)
T ss_dssp             EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHHSCCCCCCCSGGGCEECTTC
T ss_pred             cchHHHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHhhcCCeecCCCCHHHEEECCCC
Confidence            588887764   2347999999999998888                      88888888 999999999999987643

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.87  E-value=2.2e-22  Score=154.75  Aligned_cols=125  Identities=15%  Similarity=0.086  Sum_probs=104.9

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc-----eEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH-----LAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-----~~lv   72 (157)
                      .+.||+|+||.||++.+..    .+|+|.+...  .+......+..|+.++..++||||+++++++...+.     .++|
T Consensus        85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv  162 (681)
T 2pzi_A           85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIV  162 (681)
T ss_dssp             EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred             EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEE
Confidence            4579999999999999853    4999998754  445667788999999999999999999999987655     7999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+++++|.+++..   .+++.++..++.|++.                      +|+++|+++|+|||+|+.|++...
T Consensus       163 ~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~----------------------aL~~lH~~giiHrDlkp~NIll~~  217 (681)
T 2pzi_A          163 MEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILP----------------------ALSYLHSIGLVYNDLKPENIMLTE  217 (681)
T ss_dssp             EECCCCEECC----C---CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECS
T ss_pred             EEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCeecccChHHeEEeC
Confidence            999999999987764   6899999999998887                      888899999999999999999865


Q ss_pred             c
Q psy697          153 A  153 (157)
Q Consensus       153 ~  153 (157)
                      .
T Consensus       218 ~  218 (681)
T 2pzi_A          218 E  218 (681)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.87  E-value=4.3e-22  Score=139.09  Aligned_cols=129  Identities=20%  Similarity=0.228  Sum_probs=105.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|....   .+|+|.+.... ........+.+|+.++..++||||+++++++...+..+++|||++ 
T Consensus         8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-   85 (299)
T 2r3i_A            8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-   85 (299)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             hhhhccCCCeeEEEEEEcCCCceEEEEEeecCc-cchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-
Confidence            4679999999999999854   49999987643 222334678899999999999999999999999999999999997 


Q ss_pred             CCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~i~H~dlkp~Nili~~~~  140 (299)
T 2r3i_A           86 QDLKKFMDASALTGIPLPLIKSYLFQLLQ----------------------GLAFCHSHRVLHRDLKPQNLLINTEG  140 (299)
T ss_dssp             EEHHHHHHHTTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CCHHHHHHhhhccCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccCCCCCHHHeEEcCCC
Confidence            69999988653 35888888888887777                      88888999999999999999986554

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.87  E-value=1.1e-21  Score=139.28  Aligned_cols=131  Identities=25%  Similarity=0.369  Sum_probs=104.9

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHh--cCCCceeeeeeEEecCC----ceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK--TRHENLVLFMGACMKPP----HLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+.+ .+|+|.+...      ....+..|..++..  ++||||+++++++....    .++++||
T Consensus        47 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e  120 (342)
T 1b6c_B           47 QESIGKGRFGEVWRGKWRGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD  120 (342)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEEC
T ss_pred             EeeecCCCCcEEEEEEEcCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEe
Confidence            4689999999999999866 5999998642      23556778888877  79999999999998875    7999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.+++...  .+++..+..++.|++. ++.++|+...             ...++++++|||+|+.|++..+.+
T Consensus       121 ~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~-~l~~lH~~~~-------------~~~~~~~ivH~Dlkp~NIll~~~~  184 (342)
T 1b6c_B          121 YHEHGSLFDYLNRY--TVTVEGMIKLALSTAS-GLAHLHMEIV-------------GTQGKPAIAHRDLKSKNILVKKNG  184 (342)
T ss_dssp             CCTTCBHHHHHHHC--CBCHHHHHHHHHHHHH-HHHHHHCCBC-------------STTCBCEEECSCCSGGGEEECTTS
T ss_pred             ecCCCcHHHHHhcc--CccHHHHHHHHHHHHH-HHHHHHHHHh-------------hhcccCCeeeCCCCHHHEEECCCC
Confidence            99999999999753  6899999999998888 4444443211             012278999999999999986654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.87  E-value=3.7e-22  Score=145.07  Aligned_cols=120  Identities=20%  Similarity=0.196  Sum_probs=100.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHh-cCCCceeeeeeEEec----CCceEEEEe
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-TRHENLVLFMGACMK----PPHLAIVTS   74 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~----~~~~~lv~e   74 (157)
                      +.||+|+||.||++.+..   .+|+|++...        ..+.+|+.++.+ .+||||+++++++..    ...++++||
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E  139 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME  139 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence            579999999999999865   4999999642        235667777644 489999999998875    567899999


Q ss_pred             cCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           75 KCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+++|+|.+++...+ ..+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+
T Consensus       140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrDlkp~Nill~~  196 (400)
T 1nxk_A          140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGE----------------------AIQYLHSINIAHRDVKPENLLYTS  196 (400)
T ss_dssp             CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEESS
T ss_pred             eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCcCcceEEEec
Confidence            999999999998643 25899999999998877                      888889999999999999999876

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.87  E-value=1.1e-21  Score=140.91  Aligned_cols=126  Identities=19%  Similarity=0.210  Sum_probs=107.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-----CceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-----PHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~   73 (157)
                      .+.||+|+||.||+|....   .+|+|.+...  ......+.+.+|+.++..++||||+++++++...     ...+++|
T Consensus        32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~  109 (364)
T 3qyz_A           32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQ  109 (364)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEE
T ss_pred             EEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEE
Confidence            4679999999999998854   4999999754  3455667889999999999999999999998764     4689999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||++ |+|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus       110 e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~Dikp~NIl~~~~  164 (364)
T 3qyz_A          110 DLME-TDLYKLLKTQ--HLSNDHICYFLYQILR----------------------GLKYIHSANVLHRDLKPSNLLLNTT  164 (364)
T ss_dssp             ECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECTT
T ss_pred             cccC-cCHHHHHHhC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCChHhEEECCC
Confidence            9997 5999998753  6899999999998777                      8888899999999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       165 ~  165 (364)
T 3qyz_A          165 C  165 (364)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.87  E-value=1.7e-21  Score=136.00  Aligned_cols=125  Identities=18%  Similarity=0.243  Sum_probs=107.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|....   .+|+|.+....     ..+.+.+|+..+..+ +|+|++++++++......+++|||+ 
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-   88 (298)
T 1csn_A           15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-   88 (298)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-
Confidence            4679999999999999744   59999987542     123467889999999 8999999999999999999999999 


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~ivH~Dlkp~NIl~~~~~  143 (298)
T 1csn_A           89 GPSLEDLLDLCGRKFSVKTVAMAAKQMLA----------------------RVQSIHEKSLVYRDIKPDNFLIGRPN  143 (298)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECCCCCGGGEEECCSS
T ss_pred             CCCHHHHHHHhccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEecCCCCHHHEEeccCC
Confidence            99999999876556999999999998888                      78888889999999999999986543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=6.6e-22  Score=140.18  Aligned_cols=131  Identities=25%  Similarity=0.343  Sum_probs=101.5

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHh--cCCCceeeeeeEEecC----CceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK--TRHENLVLFMGACMKP----PHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~----~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+.+ .+|+|.+...    .  ......|..++..  ++||||+++++++...    ..++++||
T Consensus        42 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e  115 (337)
T 3mdy_A           42 VKQIGKGRYGEVWMGKWRGEKVAVKVFFTT----E--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITD  115 (337)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEEEEEGG----G--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEEC
T ss_pred             EeEeecCCCeEEEEEEECCceEEEEEEecc----c--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEe
Confidence            5689999999999999876 5999998652    1  2233344444444  4999999999999877    78999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++|+|.++++..  .+++..+..++.|++. ++.++|+...             .+.+..+++|||+|+.|++.....
T Consensus       116 ~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~-~l~~lH~~~~-------------~~~~~~~ivH~Dikp~Nill~~~~  179 (337)
T 3mdy_A          116 YHENGSLYDYLKST--TLDAKSMLKLAYSSVS-GLCHLHTEIF-------------STQGKPAIAHRDLKSKNILVKKNG  179 (337)
T ss_dssp             CCTTCBHHHHHHHC--CBCHHHHHHHHHHHHH-HHHHHHSCBC-------------STTCBCCEECSCCCGGGEEECTTS
T ss_pred             ccCCCcHHHHhhcc--CCCHHHHHHHHHHHHH-HHHHHHHhhh-------------hhccCCCEEecccchHHEEECCCC
Confidence            99999999999754  6899999999999988 5555554421             223344999999999999986543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.87  E-value=4.1e-22  Score=143.06  Aligned_cols=124  Identities=17%  Similarity=0.188  Sum_probs=99.9

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHH-----------HHHHHHHHHHHHhcCCCceeeeeeE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKT-----------WEAFKLEVTTFRKTRHENLVLFMGA   62 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~~~~~   62 (157)
                      .+.||+|+||.||+|.+..        .+|+|.+....   ...           ......|+..+..++||||++++++
T Consensus        40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~  116 (364)
T 3op5_A           40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS  116 (364)
T ss_dssp             EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred             EEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence            4679999999999998843        48999987642   111           1123344556677789999999999


Q ss_pred             EecC----CceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccc
Q psy697           63 CMKP----PHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRI  138 (157)
Q Consensus        63 ~~~~----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~  138 (157)
                      +...    ...+++|||+ +++|.+++...+..+++..+..++.|++.                      +|+++|++++
T Consensus       117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~----------------------~l~~lH~~~i  173 (364)
T 3op5_A          117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILD----------------------ILEYIHEHEY  173 (364)
T ss_dssp             EEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTE
T ss_pred             eeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCe
Confidence            8775    4589999999 99999999876557999999999998888                      8888899999


Q ss_pred             cccCCCCcccccc
Q psy697          139 LARSPSHPLNLSR  151 (157)
Q Consensus       139 ~~rd~k~~~~~~~  151 (157)
                      +|||+|+.|++..
T Consensus       174 iHrDlkp~Nill~  186 (364)
T 3op5_A          174 VHGDIKASNLLLN  186 (364)
T ss_dssp             ECCCCCGGGEEEE
T ss_pred             EEecCCHHHEEEe
Confidence            9999999999987

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.87  E-value=6e-22  Score=142.51  Aligned_cols=127  Identities=18%  Similarity=0.194  Sum_probs=100.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... .+....+.+.+|+.+++.++||||+++++++...      ..++++
T Consensus        34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv  112 (367)
T 2fst_X           34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV  112 (367)
T ss_dssp             EEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred             eeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEE
Confidence            4679999999999998754   49999997654 4456677888999999999999999999998654      568999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +|++ +++|.+++.. + .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus       113 ~e~~-~~~L~~~~~~-~-~l~~~~~~~i~~qi~~----------------------aL~~LH~~givH~Dlkp~NIll~~  167 (367)
T 2fst_X          113 THLM-GADLNNIVKC-Q-KLTDDHVQFLIYQILR----------------------GLKYIHSADIIHRDLKPSNLAVNE  167 (367)
T ss_dssp             EECC-CEECC------C-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECT
T ss_pred             eccc-CCCHHHHHhc-C-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeCCCCHhhEEECC
Confidence            9999 6899998875 2 6899999999998777                      888889999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       168 ~~  169 (367)
T 2fst_X          168 DC  169 (367)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.87  E-value=1.5e-21  Score=138.10  Aligned_cols=121  Identities=15%  Similarity=0.174  Sum_probs=103.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEec--CCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMK--PPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|....   .+|+|++...      ..+.+.+|+.++..++ |||++++++++..  ....+++|||
T Consensus        41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~  114 (330)
T 3nsz_A           41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  114 (330)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence            4689999999999998744   5999998753      2456889999999996 9999999999987  5678999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++++|.++++    .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus       115 ~~~~~l~~~~~----~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~Dikp~Nil~~~~~  167 (330)
T 3nsz_A          115 VNNTDFKQLYQ----TLTDYDIRFYMYEILK----------------------ALDYCHSMGIMHRDVKPHNVMIDHEH  167 (330)
T ss_dssp             CCCCCHHHHGG----GCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             cCchhHHHHHH----hCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeCCCCHHHEEEcCCC
Confidence            99999999885    4788999888887777                      88889999999999999999986543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.86  E-value=9.9e-23  Score=145.15  Aligned_cols=131  Identities=12%  Similarity=0.149  Sum_probs=108.8

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCH--------------HHHHHHHHHHHHHHhcCCCceeeeeeEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDE--------------KTWEAFKLEVTTFRKTRHENLVLFMGACMKP   66 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~   66 (157)
                      .+.||+|+||.||+|...+ .+|+|.+........              ...+.+.+|+.++..++|||++++++++...
T Consensus        36 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  115 (348)
T 2pml_X           36 IRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNY  115 (348)
T ss_dssp             EEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESS
T ss_pred             EEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence            4679999999999999844 499999875321111              0117789999999999999999999999999


Q ss_pred             CceEEEEecCCCCCHhHH------Hhhh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccc
Q psy697           67 PHLAIVTSKCNGHTLYTN------IHIY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRI  138 (157)
Q Consensus        67 ~~~~lv~e~~~~g~L~~~------i~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~  138 (157)
                      +..+++|||+++++|.++      +... ...+++..+..++.|++.                      +|+++|+ +++
T Consensus       116 ~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~~i  173 (348)
T 2pml_X          116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLN----------------------SFSYIHNEKNI  173 (348)
T ss_dssp             SEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHH----------------------HHHHHHHTSCE
T ss_pred             CeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHH----------------------HHHHHhccCCE
Confidence            999999999999999998      6542 336899999999998888                      7778887 899


Q ss_pred             cccCCCCccccccccc
Q psy697          139 LARSPSHPLNLSRSAE  154 (157)
Q Consensus       139 ~~rd~k~~~~~~~~~~  154 (157)
                      +|||+++.|++.....
T Consensus       174 ~H~dl~p~Nil~~~~~  189 (348)
T 2pml_X          174 CHRDVKPSNILMDKNG  189 (348)
T ss_dssp             ECCCCCGGGEEECTTS
T ss_pred             eecCCChHhEEEcCCC
Confidence            9999999999986543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.86  E-value=6.3e-22  Score=142.41  Aligned_cols=130  Identities=8%  Similarity=0.000  Sum_probs=91.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc--CCCceeeee-------eEEecC---
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT--RHENLVLFM-------GACMKP---   66 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~-------~~~~~~---   66 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+...........+.+.+|+.++..+  +|||+++++       +.+..+   
T Consensus        67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~  146 (371)
T 3q60_A           67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP  146 (371)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred             eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence            4679999999999999864   4999999886533445666777885444444  699988755       333332   


Q ss_pred             --------------CceEEEEecCCCCCHhHHHhhhcccCCHHHH------HHHHHHHHHHHHHHhhcCCCCCCCCHHHH
Q psy697           67 --------------PHLAIVTSKCNGHTLYTNIHIYKEKFALNKM------STVGQQISQDVLMKCWSYKPSDRPDFITL  126 (157)
Q Consensus        67 --------------~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i  126 (157)
                                    ..++++|||++ |+|.+++...+..+++...      ..++.|++.                    
T Consensus       147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~--------------------  205 (371)
T 3q60_A          147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIR--------------------  205 (371)
T ss_dssp             SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH--------------------
T ss_pred             CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHH--------------------
Confidence                          33799999998 8999999875534555555      566676666                    


Q ss_pred             HHHHhccccccccccCCCCccccccccc
Q psy697          127 MKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       127 ~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                        +|+++|+++++|||+|+.|+|..+.+
T Consensus       206 --aL~~LH~~~ivHrDikp~NIll~~~~  231 (371)
T 3q60_A          206 --LAANLQSKGLVHGHFTPDNLFIMPDG  231 (371)
T ss_dssp             --HHHHHHHTTEEETTCSGGGEEECTTS
T ss_pred             --HHHHHHHCCCccCcCCHHHEEECCCC
Confidence              88889999999999999999987654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.86  E-value=1.8e-21  Score=138.86  Aligned_cols=126  Identities=16%  Similarity=0.155  Sum_probs=107.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-----CceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-----PHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~   73 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+...  ........+.+|+.++..++||||+++++++...     ...+++|
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~   93 (353)
T 2b9h_A           16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ   93 (353)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEE
T ss_pred             eeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEE
Confidence            4679999999999999864   4999999754  3455677788999999999999999999987654     6789999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+. ++|.+++...  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus        94 e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~----------------------~L~~LH~~~ivH~Dlkp~Nil~~~~  148 (353)
T 2b9h_A           94 ELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLR----------------------AVKVLHGSNVIHRDLKPSNLLINSN  148 (353)
T ss_dssp             CCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             eccC-ccHHHHHhhc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHeEEcCC
Confidence            9997 6999988753  6899999999998777                      8888899999999999999998654


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      .
T Consensus       149 ~  149 (353)
T 2b9h_A          149 C  149 (353)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.86  E-value=1.1e-21  Score=140.64  Aligned_cols=130  Identities=18%  Similarity=0.121  Sum_probs=107.5

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCC--------CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-----C
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYL--------DDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-----P   66 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~--------~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~   66 (157)
                      .+.||+|+||.||+|....  .+|+|.+.....        .+....+.+.+|+.++..++||||+++++++..     .
T Consensus        27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  106 (362)
T 3pg1_A           27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM  106 (362)
T ss_dssp             EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred             eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence            4689999999999998754  599999865431        123345788999999999999999999999854     3


Q ss_pred             CceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCc
Q psy697           67 PHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP  146 (157)
Q Consensus        67 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~  146 (157)
                      ..++++|||++ |+|.+.+...+..+++..+..++.|++.                      +|.++|+++++|||+|+.
T Consensus       107 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~Dlkp~  163 (362)
T 3pg1_A          107 HKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILL----------------------GLHVLHEAGVVHRDLHPG  163 (362)
T ss_dssp             CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGG
T ss_pred             ceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHH----------------------HHHHHHHCcCEecCCChH
Confidence            46899999997 6888888766557999999999998888                      788888999999999999


Q ss_pred             cccccccc
Q psy697          147 LNLSRSAE  154 (157)
Q Consensus       147 ~~~~~~~~  154 (157)
                      |++.....
T Consensus       164 NIl~~~~~  171 (362)
T 3pg1_A          164 NILLADNN  171 (362)
T ss_dssp             GEEECTTC
T ss_pred             HEEEcCCC
Confidence            99986544

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.86  E-value=1.7e-21  Score=137.87  Aligned_cols=127  Identities=20%  Similarity=0.284  Sum_probs=105.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEe--------cCCce
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACM--------KPPHL   69 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--------~~~~~   69 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+..   ......+.+.+|+..+..+. ||||+++++++.        ....+
T Consensus        33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~  109 (337)
T 3ll6_A           33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLS---NEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF  109 (337)
T ss_dssp             EEEEECCSSEEEEEEEETTTCCEEEEEEEEE---SSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred             EEEEccCCceEEEEEEECCCCcEEEEEEecC---CchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence            4689999999999999854   599999865   34566778899999999995 999999999984        23458


Q ss_pred             EEEEecCCCCCHhHHHhhh--cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc--ccccCCCC
Q psy697           70 AIVTSKCNGHTLYTNIHIY--KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR--ILARSPSH  145 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~--~~~rd~k~  145 (157)
                      +++|||+. |+|.+++...  ...+++..+..++.|++.                      +|.++|+++  ++|||+|+
T Consensus       110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~LH~~~~~ivH~Dikp  166 (337)
T 3ll6_A          110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCR----------------------AVQHMHRQKPPIIHRDLKV  166 (337)
T ss_dssp             EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHH----------------------HHHHHHTSSSCCBCCCCCG
T ss_pred             EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCCCEEEccCCc
Confidence            99999995 7999988752  336999999999998888                      777778777  99999999


Q ss_pred             ccccccccc
Q psy697          146 PLNLSRSAE  154 (157)
Q Consensus       146 ~~~~~~~~~  154 (157)
                      .|++.....
T Consensus       167 ~NIl~~~~~  175 (337)
T 3ll6_A          167 ENLLLSNQG  175 (337)
T ss_dssp             GGCEECTTS
T ss_pred             ccEEECCCC
Confidence            999987654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.86  E-value=9.6e-22  Score=142.97  Aligned_cols=122  Identities=17%  Similarity=0.280  Sum_probs=96.0

Q ss_pred             CCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e   74 (157)
                      +++||+|+||.||+|.+..     .+|+|.+.....     ...+.+|+.+++.++||||+++++++..  ...++++||
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e  100 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD  100 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence            5689999999999999752     499999976431     2357789999999999999999999954  678999999


Q ss_pred             cCCCCCHhHHHhhhc--------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCc
Q psy697           75 KCNGHTLYTNIHIYK--------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHP  146 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~--------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~  146 (157)
                      |++ |+|.+++...+        ..+++..+..++.|++.                      +|+++|+++|+|||+|+.
T Consensus       101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------al~~LH~~~ivH~Dlkp~  157 (405)
T 3rgf_A          101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD----------------------GIHYLHANWVLHRDLKPA  157 (405)
T ss_dssp             CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGG
T ss_pred             CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeCCCcCHH
Confidence            996 58888876432        13888899999998777                      888889999999999999


Q ss_pred             ccccc
Q psy697          147 LNLSR  151 (157)
Q Consensus       147 ~~~~~  151 (157)
                      |++..
T Consensus       158 NIll~  162 (405)
T 3rgf_A          158 NILVM  162 (405)
T ss_dssp             GEEEC
T ss_pred             HeEEe
Confidence            99984

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.86  E-value=9.9e-22  Score=136.20  Aligned_cols=123  Identities=22%  Similarity=0.262  Sum_probs=103.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-------------
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-------------   65 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------------   65 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+....       ..+.+|+.++..++|||++++++++..             
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   88 (284)
T 2a19_B           16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSS   88 (284)
T ss_dssp             EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------
T ss_pred             eeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccc
Confidence            4679999999999999863   59999997632       235679999999999999999998854             


Q ss_pred             ---CCceEEEEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccccccc
Q psy697           66 ---PPHLAIVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILAR  141 (157)
Q Consensus        66 ---~~~~~lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~r  141 (157)
                         ...++++|||+++++|.+++.... ..+++..+..++.|++.                      +|.++|+++++||
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~  146 (284)
T 2a19_B           89 RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK----------------------GVDYIHSKKLINR  146 (284)
T ss_dssp             CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECS
T ss_pred             ccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeec
Confidence               345899999999999999998643 36899999999998777                      7788888999999


Q ss_pred             CCCCcccccccc
Q psy697          142 SPSHPLNLSRSA  153 (157)
Q Consensus       142 d~k~~~~~~~~~  153 (157)
                      |+|+.|++..+.
T Consensus       147 dlkp~Nil~~~~  158 (284)
T 2a19_B          147 DLKPSNIFLVDT  158 (284)
T ss_dssp             CCSGGGEEEEET
T ss_pred             cCCHHHEEEcCC
Confidence            999999987654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.86  E-value=1.1e-21  Score=138.64  Aligned_cols=127  Identities=24%  Similarity=0.370  Sum_probs=107.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEec------CCceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMK------PPHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~------~~~~~l   71 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+....    .....+.+|+..+..+ +||||+++++++..      .+.+++
T Consensus        29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l  104 (326)
T 2x7f_A           29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL  104 (326)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred             EEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence            4679999999999999844   59999997643    2345678899999999 89999999999977      467899


Q ss_pred             EEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           72 VTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      +|||+++++|.+++.... ..+++..+..++.|++.                      +|.++|+++++|+|+++.|++.
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~ivH~dlkp~NIl~  162 (326)
T 2x7f_A          105 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR----------------------GLSHLHQHKVIHRDIKGQNVLL  162 (326)
T ss_dssp             EEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCSGGGEEE
T ss_pred             EEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCcHHHEEE
Confidence            999999999999998743 36899999999887777                      7888888999999999999998


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      ....
T Consensus       163 ~~~~  166 (326)
T 2x7f_A          163 TENA  166 (326)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            6543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.86  E-value=1.8e-21  Score=140.08  Aligned_cols=126  Identities=17%  Similarity=0.206  Sum_probs=107.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCce------EEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHL------AIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~------~lv   72 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ........+.+|+.+++.++||||+++++++...+..      +++
T Consensus        47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv  125 (371)
T 4exu_A           47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV  125 (371)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred             EeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEE
Confidence            4679999999999999864   49999997654 4556678889999999999999999999999877654      999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+. ++|.+.+..   .+++..+..++.|++.                      +|+++|+++++|||+|+.|++...
T Consensus       126 ~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~Dikp~NIll~~  179 (371)
T 4exu_A          126 MPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLK----------------------GLKYIHSAGVVHRDLKPGNLAVNE  179 (371)
T ss_dssp             EECCC-EEHHHHTTS---CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             Ecccc-ccHHHHhhc---CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCcCCCcCHHHeEECC
Confidence            99997 588877743   5899999999998777                      788888899999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       180 ~~  181 (371)
T 4exu_A          180 DC  181 (371)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.86  E-value=8.2e-22  Score=140.56  Aligned_cols=128  Identities=16%  Similarity=0.132  Sum_probs=100.2

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHH---------HHHHHHHHHHHHHhcCCCceeeeeeEEec-
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEK---------TWEAFKLEVTTFRKTRHENLVLFMGACMK-   65 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~~~~~~~~-   65 (157)
                      .+.||+|+||.||+|.+..      .+|+|...... ....         ....+.+|+..+..++||||+++++++.. 
T Consensus        42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~  120 (345)
T 2v62_A           42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN-GPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE  120 (345)
T ss_dssp             EEEC------CEEEEEESSSCGGGCCEEEEEEECC--CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE
T ss_pred             EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC-cchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc
Confidence            4689999999999999853      38999987642 1100         12235677888899999999999999988 


Q ss_pred             ---CCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccC
Q psy697           66 ---PPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARS  142 (157)
Q Consensus        66 ---~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd  142 (157)
                         ....+++|||+ +++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||
T Consensus       121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~D  176 (345)
T 2v62_A          121 FKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLD----------------------VLEYIHENEYVHGD  176 (345)
T ss_dssp             SSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSC
T ss_pred             cCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeCCC
Confidence               67899999999 999999998766 7999999999998888                      78888889999999


Q ss_pred             CCCccccccccc
Q psy697          143 PSHPLNLSRSAE  154 (157)
Q Consensus       143 ~k~~~~~~~~~~  154 (157)
                      +|+.|++....+
T Consensus       177 lkp~NIll~~~~  188 (345)
T 2v62_A          177 IKAANLLLGYKN  188 (345)
T ss_dssp             CSGGGEEEESSS
T ss_pred             cCHHHEEEccCC
Confidence            999999987654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.86  E-value=2.3e-21  Score=135.66  Aligned_cols=121  Identities=21%  Similarity=0.202  Sum_probs=102.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHH-HhcCCCceeeeeeEEec----CCceEEEEe
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTF-RKTRHENLVLFMGACMK----PPHLAIVTS   74 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e   74 (157)
                      +.||+|+||.||++....   .+|+|.+...        ..+.+|+..+ ...+||||+++++++..    ...++++||
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e   95 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   95 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence            569999999999999854   5999999642        2356677777 55599999999999876    677899999


Q ss_pred             cCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+++|+|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~i~H~dlkp~Nil~~~~  153 (299)
T 3m2w_A           96 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGE----------------------AIQYLHSINIAHRDVKPENLLYTSK  153 (299)
T ss_dssp             CCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEESSS
T ss_pred             ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCCCCHHHEEEecC
Confidence            999999999998753 25899999999998888                      7888889999999999999998763

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.86  E-value=2.7e-21  Score=136.00  Aligned_cols=126  Identities=13%  Similarity=0.183  Sum_probs=109.0

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC--CCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR--HENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||++....  .+|+|.+.... .+....+.+.+|+.++..++  |||++++++++...+..+++|| +.
T Consensus        33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~  110 (313)
T 3cek_A           33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG  110 (313)
T ss_dssp             EEEEECCSSEEEEEEECTTCCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred             EEEecCCCCEEEEEEEcCCCcEEEEEEecccc-ccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cC
Confidence            4689999999999998754  49999997654 45566788999999999996  5999999999999999999999 56


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      +++|.+++...+ .+++..+..++.|++.                      +|.++|+++++|||+|+.|++...
T Consensus       111 ~~~L~~~l~~~~-~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivH~dlkp~NIl~~~  162 (313)
T 3cek_A          111 NIDLNSWLKKKK-SIDPWERKSYWKNMLE----------------------AVHTIHQHGIVHSDLKPANFLIVD  162 (313)
T ss_dssp             SEEHHHHHHHCS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEEET
T ss_pred             CCcHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCceecCCCcccEEEEC
Confidence            889999998755 7899999999887777                      788888899999999999998743

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.86  E-value=1e-21  Score=139.31  Aligned_cols=123  Identities=19%  Similarity=0.271  Sum_probs=95.9

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHH--HHHHHHHhcCCCceeeeeeEEec-----CCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFK--LEVTTFRKTRHENLVLFMGACMK-----PPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~niv~~~~~~~~-----~~~~~lv~   73 (157)
                      .+.||+|+||.||+|...+ .+|+|++....      ...+.  .++..+..++|||++++++.+..     ...++++|
T Consensus        18 ~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~   91 (336)
T 3g2f_A           18 LELIGRGRYGAVYKGSLDERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM   91 (336)
T ss_dssp             EEEEEECSSEEEEEEEETTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred             eeecccCCCeEEEEEEECCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence            4689999999999998866 59999997531      22333  33444456899999999975543     23578999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc---------cccccCCC
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK---------RILARSPS  144 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~---------~~~~rd~k  144 (157)
                      ||+++|+|.+++...  ..++..+..++.|++.                      +|+++|++         +++|||+|
T Consensus        92 e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~----------------------~L~~LH~~~~~~~~~~~~ivH~Dik  147 (336)
T 3g2f_A           92 EYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTR----------------------GLAYLHTELPRGDHYKPAISHRDLN  147 (336)
T ss_dssp             CCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHH----------------------HHHHHHCCBCCGGGCBCCEECSSCS
T ss_pred             ecCCCCcHHHHHhhc--ccchhHHHHHHHHHHH----------------------HHHHHHhhhccccccccceeecccc
Confidence            999999999999765  4688888889888888                      56666666         99999999


Q ss_pred             Cccccccccc
Q psy697          145 HPLNLSRSAE  154 (157)
Q Consensus       145 ~~~~~~~~~~  154 (157)
                      +.|++..+..
T Consensus       148 p~Nill~~~~  157 (336)
T 3g2f_A          148 SRNVLVKNDG  157 (336)
T ss_dssp             GGGEEECTTS
T ss_pred             cceEEEcCCC
Confidence            9999987653

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.86  E-value=3.7e-21  Score=145.19  Aligned_cols=124  Identities=10%  Similarity=0.004  Sum_probs=92.8

Q ss_pred             ccCceeeEEEEE---EecceEEEEeccCCCCC-------HHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEe
Q psy697            6 GKGHFGTVYNGN---WHGEVAVKVLDVDYLDD-------EKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         6 g~G~~g~v~~~~---~~~~~avk~~~~~~~~~-------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      +.|.+|....++   ....+++|.+.......       ....+.+.+|+.+|+++ +|+|++++++++.+.+.+|||||
T Consensus       243 ~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVME  322 (569)
T 4azs_A          243 YAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVME  322 (569)
T ss_dssp             C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEE
T ss_pred             ccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEe
Confidence            344444444332   34469999997653211       23356799999999999 79999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++|++|.++|...+ ++++.   .++.||+.                      +|+++|++||+|||+|+.|+|..+.+
T Consensus       323 yv~G~~L~d~i~~~~-~l~~~---~I~~QIl~----------------------AL~ylH~~GIIHRDIKPeNILL~~dg  376 (569)
T 4azs_A          323 KLPGRLLSDMLAAGE-EIDRE---KILGSLLR----------------------SLAALEKQGFWHDDVRPWNVMVDARQ  376 (569)
T ss_dssp             CCCSEEHHHHHHTTC-CCCHH---HHHHHHHH----------------------HHHHHHHTTCEESCCCGGGEEECTTS
T ss_pred             cCCCCcHHHHHHhCC-CCCHH---HHHHHHHH----------------------HHHHHHHCCceeccCchHhEEECCCC
Confidence            999999999998755 67654   35565555                      88999999999999999999987655


Q ss_pred             C
Q psy697          155 S  155 (157)
Q Consensus       155 ~  155 (157)
                      .
T Consensus       377 ~  377 (569)
T 4azs_A          377 H  377 (569)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.85  E-value=6.7e-21  Score=139.59  Aligned_cols=126  Identities=22%  Similarity=0.274  Sum_probs=106.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc------CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT------RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~~~lv   72 (157)
                      .+.||+|+||.||+|.+..   .+|+|++..    .......+.+|+.++..+      +|+|++++++.+...+.++++
T Consensus       102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  177 (429)
T 3kvw_A          102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRN----EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT  177 (429)
T ss_dssp             EEEEEESSSEEEEEEEETTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred             EEEcccCccEEEEEEEECCCCcEEEEEEECC----ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence            4689999999999998865   499999974    344556777888888776      677999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           73 TSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      |||+. ++|.+++.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|+|..
T Consensus       178 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrDlKp~NILl~  234 (429)
T 3kvw_A          178 FELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQ----------------------CLDALHKNRIIHCDLKPENILLK  234 (429)
T ss_dssp             ECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHHTEECSCCSGGGEEES
T ss_pred             EeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHeEEc
Confidence            99996 69999988754 24899999999998777                      88888999999999999999987


Q ss_pred             ccc
Q psy697          152 SAE  154 (157)
Q Consensus       152 ~~~  154 (157)
                      ..+
T Consensus       235 ~~~  237 (429)
T 3kvw_A          235 QQG  237 (429)
T ss_dssp             STT
T ss_pred             cCC
Confidence            654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.85  E-value=1e-21  Score=137.53  Aligned_cols=131  Identities=21%  Similarity=0.259  Sum_probs=104.3

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCC-CCHHHHHHHHHHHHHHHhcCCCceeeeeeEEe--cCCceEEEEe
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL-DDEKTWEAFKLEVTTFRKTRHENLVLFMGACM--KPPHLAIVTS   74 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~lv~e   74 (157)
                      +++.||+|+||.||++....   .+|+|.+..... ........+.+|+.++..++||||+++++++.  .....+++||
T Consensus         9 i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (305)
T 2wtk_C            9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVME   88 (305)
T ss_dssp             CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred             EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEeh
Confidence            46789999999999999854   499999975321 01234567899999999999999999999984  4567899999


Q ss_pred             cCCCCCHhHHHhhh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |++++ +.+++... ...+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus        89 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~LH~~~i~H~dlkp~NIl~~~~  145 (305)
T 2wtk_C           89 YCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLID----------------------GLEYLHSQGIVHKDIKPGNLLLTTG  145 (305)
T ss_dssp             CCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECTT
T ss_pred             hccCC-HHHHHHhCcccccCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCCcccEEEcCC
Confidence            99876 77776653 336899999999988777                      7888888999999999999998654


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       146 ~  146 (305)
T 2wtk_C          146 G  146 (305)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.85  E-value=2.9e-21  Score=138.04  Aligned_cols=126  Identities=17%  Similarity=0.206  Sum_probs=106.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc------eEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH------LAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~~lv   72 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... .+......+.+|+.++..++||||+++++++.....      .+++
T Consensus        29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv  107 (353)
T 3coi_A           29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV  107 (353)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred             eeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEE
Confidence            4679999999999999854   49999997654 445567788999999999999999999999987654      4999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+. ++|.+++..   .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus       108 ~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~----------------------al~~LH~~~ivH~dlkp~NIl~~~  161 (353)
T 3coi_A          108 MPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLK----------------------GLKYIHSAGVVHRDLKPGNLAVNE  161 (353)
T ss_dssp             EECCS-EEGGGTTTS---CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSSCCGGGEEECT
T ss_pred             ecccc-CCHHHHhcC---CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEeECC
Confidence            99997 588887753   5899999999998777                      788888899999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       162 ~~  163 (353)
T 3coi_A          162 DC  163 (353)
T ss_dssp             TC
T ss_pred             CC
Confidence            54

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.85  E-value=2e-21  Score=140.41  Aligned_cols=125  Identities=26%  Similarity=0.252  Sum_probs=103.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC--------CCceeeeeeEEe----cC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR--------HENLVLFMGACM----KP   66 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~----~~   66 (157)
                      .+.||+|+||.||+|....   .+|+|.+..    .....+.+.+|+.++..+.        |+|++++++.+.    ..
T Consensus        42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~  117 (397)
T 1wak_A           42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS----AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNG  117 (397)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTE
T ss_pred             EEEeeecCCeeEEEEEecCCCeEEEEEEEec----CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCC
Confidence            4679999999999998754   499999974    3455677889999999885        788999999987    45


Q ss_pred             CceEEEEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCC
Q psy697           67 PHLAIVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPS  144 (157)
Q Consensus        67 ~~~~lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k  144 (157)
                      ..++++|||+ ++++.+.+.... ..+++..+..++.|++.                      +|+++|++ +++|||+|
T Consensus       118 ~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~lH~~~givHrDik  174 (397)
T 1wak_A          118 THICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQ----------------------GLDYLHTKCRIIHTDIK  174 (397)
T ss_dssp             EEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCEECCCCS
T ss_pred             ceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHH----------------------HHHHHHHhCCEecCCCC
Confidence            6799999999 556666665432 46999999999998888                      88889998 99999999


Q ss_pred             Ccccccccc
Q psy697          145 HPLNLSRSA  153 (157)
Q Consensus       145 ~~~~~~~~~  153 (157)
                      +.|+|....
T Consensus       175 p~NIll~~~  183 (397)
T 1wak_A          175 PENILLSVN  183 (397)
T ss_dssp             GGGEEECCC
T ss_pred             HHHeeEecc
Confidence            999998754

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.85  E-value=8.9e-22  Score=150.08  Aligned_cols=130  Identities=22%  Similarity=0.283  Sum_probs=111.3

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec------CCceEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK------PPHLAI   71 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~~~l   71 (157)
                      +.+.||+|+||.||+|.+..   .+|+|.+...  ......+.+.+|+.++..++||||+++++++..      .+..++
T Consensus        18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~L   95 (676)
T 3qa8_A           18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLL   95 (676)
T ss_dssp             CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCC
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEE
Confidence            46789999999999998754   5999998764  356667889999999999999999999998765      667899


Q ss_pred             EEecCCCCCHhHHHhhhcc--cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           72 VTSKCNGHTLYTNIHIYKE--KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      +|||+++|+|.+++...+.  .+++..+..++.|++.                      +|+++|+++++|||+|+.|++
T Consensus        96 VmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~----------------------aL~yLHs~gIVHrDLKP~NIL  153 (676)
T 3qa8_A           96 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS----------------------ALRYLHENRIIHRDLKPENIV  153 (676)
T ss_dssp             EEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHH----------------------HHHHHHHTTBCCCCCCSTTEE
T ss_pred             EEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCCccCCCCHHHeE
Confidence            9999999999999986432  5889999999998777                      888889999999999999999


Q ss_pred             ccccc
Q psy697          150 SRSAE  154 (157)
Q Consensus       150 ~~~~~  154 (157)
                      ....+
T Consensus       154 l~~~g  158 (676)
T 3qa8_A          154 LQPGP  158 (676)
T ss_dssp             EECCS
T ss_pred             eecCC
Confidence            87543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.85  E-value=3.1e-21  Score=135.45  Aligned_cols=130  Identities=22%  Similarity=0.239  Sum_probs=101.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCC--CHHHHHHHHHHHHHHHhc---CCCceeeeeeEEecCC-----c
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLD--DEKTWEAFKLEVTTFRKT---RHENLVLFMGACMKPP-----H   68 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~-----~   68 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+......  .......+.+|+.++..+   +||||+++++++....     .
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~   93 (308)
T 3g33_A           14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK   93 (308)
T ss_dssp             EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence            4689999999999999744   4999998753211  111123445566666555   5999999999998765     4


Q ss_pred             eEEEEecCCCCCHhHHHhhhcc-cCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcc
Q psy697           69 LAIVTSKCNGHTLYTNIHIYKE-KFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPL  147 (157)
Q Consensus        69 ~~lv~e~~~~g~L~~~i~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~  147 (157)
                      ++++|||+. ++|.+++..... .+++..+..++.|++.                      +|+++|+++++|||+|+.|
T Consensus        94 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------al~~lH~~~ivH~Dlkp~N  150 (308)
T 3g33_A           94 VTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLR----------------------GLDFLHANCIVHRDLKPEN  150 (308)
T ss_dssp             EEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCTTT
T ss_pred             EEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHH
Confidence            899999997 599999987542 3899999999998887                      7888889999999999999


Q ss_pred             ccccccc
Q psy697          148 NLSRSAE  154 (157)
Q Consensus       148 ~~~~~~~  154 (157)
                      ++....+
T Consensus       151 il~~~~~  157 (308)
T 3g33_A          151 ILVTSGG  157 (308)
T ss_dssp             EEECTTS
T ss_pred             EEEcCCC
Confidence            9986554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.84  E-value=1.2e-20  Score=132.74  Aligned_cols=129  Identities=14%  Similarity=0.130  Sum_probs=97.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... ......+.+..+..++..++||||+++++++...+..+++|||+ +
T Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~  107 (318)
T 2dyl_A           30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG-NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-G  107 (318)
T ss_dssp             EEEC------CEEEEEETTTCCEEEEEEEETTS-CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred             cceeeecCCeeEEEEEEecCCeEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-C
Confidence            4679999999999999853   59999998653 22333344444556677889999999999999999999999999 5


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~~  154 (157)
                      +.+..+.......+++..+..++.|++.                      +|.++|++ +++|||+|+.|++.....
T Consensus       108 ~~~~~l~~~~~~~~~~~~~~~~~~~i~~----------------------~l~~lH~~~~i~H~dlkp~Nil~~~~~  162 (318)
T 2dyl_A          108 TCAEKLKKRMQGPIPERILGKMTVAIVK----------------------ALYYLKEKHGVIHRDVKPSNILLDERG  162 (318)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHH----------------------HHHHHHHHHCCCCCCCCGGGEEECTTS
T ss_pred             CcHHHHHHHhccCCCHHHHHHHHHHHHH----------------------HHHHHHhhCCEEeCCCCHHHEEECCCC
Confidence            5666666554457999999999998877                      77888885 899999999999986543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.84  E-value=1.8e-21  Score=139.04  Aligned_cols=122  Identities=14%  Similarity=0.140  Sum_probs=103.3

Q ss_pred             CCccccCceeeEEEEEEec-----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceee------------
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL------------   58 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------------   58 (157)
                      .+.||+|+||.||+|.+..           .+|+|.+...        +.+.+|+.++..++|||+++            
T Consensus        47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  118 (352)
T 2jii_A           47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA  118 (352)
T ss_dssp             EEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred             EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence            4689999999999998742           4999999753        24678999999999999887            


Q ss_pred             ---eeeEEec-CCceEEEEecCCCCCHhHHHhhh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697           59 ---FMGACMK-PPHLAIVTSKCNGHTLYTNIHIY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus        59 ---~~~~~~~-~~~~~lv~e~~~~g~L~~~i~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                         +++++.. ....+++|||+ +++|.+++... +..+++..+..++.|++.                      +|+++
T Consensus       119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~----------------------~L~~L  175 (352)
T 2jii_A          119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLD----------------------ALEFL  175 (352)
T ss_dssp             CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHH----------------------HHHHH
T ss_pred             ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHH----------------------HHHHH
Confidence               5666665 67889999999 99999999875 247999999999998888                      78888


Q ss_pred             ccccccccCCCCccccccccc
Q psy697          134 PKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       134 ~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++++|||+|+.|++....+
T Consensus       176 H~~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          176 HENEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             HHTTCBCSCCCGGGEEEETTE
T ss_pred             HhCCccCCCCCHHHEEEcCCC
Confidence            889999999999999987653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.84  E-value=1.6e-20  Score=132.78  Aligned_cols=128  Identities=17%  Similarity=0.218  Sum_probs=103.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHH-HHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVT-TFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|....   .+|+|.+...  ........+..|.. +++.++||||+++++++...+..+++|||++
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~  104 (327)
T 3aln_A           27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST--VDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS  104 (327)
T ss_dssp             -CEEEECSSEEEEEEEETTTTEEEEEEEEECC--CCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             hheeccCCCEEEEEEEEcCCCCEEEEEEeecc--cCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC
Confidence            5789999999999999864   4999999865  23444555666665 6667799999999999999999999999997


Q ss_pred             CCCHhHHHhhh----cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCccccccc
Q psy697           78 GHTLYTNIHIY----KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRS  152 (157)
Q Consensus        78 ~g~L~~~i~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~  152 (157)
                      + +|.+++...    ...+++..+..++.|++.                      +|.++|++ +++|||+|+.|++..+
T Consensus       105 ~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~----------------------~l~~lH~~~~ivH~dlkp~NIll~~  161 (327)
T 3aln_A          105 T-SFDKFYKYVYSVLDDVIPEEILGKITLATVK----------------------ALNHLKENLKIIHRDIKPSNILLDR  161 (327)
T ss_dssp             E-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH----------------------HHHHHHHHHSCCCSCCCGGGEEEET
T ss_pred             C-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHH----------------------HHHHHhccCCEeECCCCHHHEEEcC
Confidence            5 888877641    336889999999887777                      78888888 9999999999999865


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       162 ~~  163 (327)
T 3aln_A          162 SG  163 (327)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.84  E-value=6.4e-21  Score=137.71  Aligned_cols=121  Identities=18%  Similarity=0.141  Sum_probs=98.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------------
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------------   66 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------------   66 (157)
                      ++.||+|+||.||+|.+..   .+|+|.+.....       ...+|+.+++.++||||+++++++...            
T Consensus        12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~   84 (383)
T 3eb0_A           12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD   84 (383)
T ss_dssp             EEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred             EEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence            5789999999999999854   499999875421       123689999999999999999998543            


Q ss_pred             --------------------------CceEEEEecCCCCCHhHHHhh---hcccCCHHHHHHHHHHHHHHHHHHhhcCCC
Q psy697           67 --------------------------PHLAIVTSKCNGHTLYTNIHI---YKEKFALNKMSTVGQQISQDVLMKCWSYKP  117 (157)
Q Consensus        67 --------------------------~~~~lv~e~~~~g~L~~~i~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  117 (157)
                                                ..++++|||++ |+|.+.+..   .+..+++..+..++.|++.           
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~-----------  152 (383)
T 3eb0_A           85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFR-----------  152 (383)
T ss_dssp             -------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-----------
T ss_pred             ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHH-----------
Confidence                                      34889999997 588877764   2336999999999998877           


Q ss_pred             CCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697          118 SDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus       118 ~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                                 +|+++|+++++|||+|+.|++..+
T Consensus       153 -----------aL~~LH~~gi~H~Dikp~Nil~~~  176 (383)
T 3eb0_A          153 -----------AVGFIHSLGICHRDIKPQNLLVNS  176 (383)
T ss_dssp             -----------HHHHHHTTTEECSCCCGGGEEEET
T ss_pred             -----------HHHHHHHCcCccCccCHHHEEEcC
Confidence                       888888899999999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.84  E-value=1.2e-20  Score=133.59  Aligned_cols=124  Identities=23%  Similarity=0.252  Sum_probs=104.8

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCC------ceeeeeeEEecCCceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE------NLVLFMGACMKPPHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~~~~~~~~~l   71 (157)
                      .+.||+|+||.||+|....    .+|+|++..    .....+.+.+|+.++..++|+      +++++++++...+.+++
T Consensus        19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~l   94 (339)
T 1z57_A           19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN----VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICI   94 (339)
T ss_dssp             EEEEEEETTEEEEEEEETTTTTEEEEEEEECS----SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEE
T ss_pred             EEEEecCCCeEEEEEEecCCCCcEEEEEEEec----CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEE
Confidence            4679999999999998732    499999974    235567788899998888665      49999999999999999


Q ss_pred             EEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           72 VTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      +|||+ +++|.+++...+ ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.
T Consensus        95 v~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~ivH~Dlkp~Nil~  151 (339)
T 1z57_A           95 VFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK----------------------SVNFLHSNKLTHTDLKPENILF  151 (339)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEE
T ss_pred             EEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHH----------------------HHHHHHHCCCcCCCCCHHHEEE
Confidence            99999 889999998754 25889999999998777                      8888999999999999999997


Q ss_pred             cc
Q psy697          151 RS  152 (157)
Q Consensus       151 ~~  152 (157)
                      ..
T Consensus       152 ~~  153 (339)
T 1z57_A          152 VQ  153 (339)
T ss_dssp             SC
T ss_pred             ec
Confidence            65

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.84  E-value=1.7e-20  Score=133.39  Aligned_cols=122  Identities=17%  Similarity=0.201  Sum_probs=98.4

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec----CCceEEEEec
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK----PPHLAIVTSK   75 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e~   75 (157)
                      +.||+|+||.||+|.+..   .+|+|++...    ....+.   ....+..++|||++++++++..    ...++++|||
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~  107 (336)
T 3fhr_A           35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQE---VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMEC  107 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHH---HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             eeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHH---HHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEec
Confidence            469999999999999864   5999998652    222222   2233566799999999999876    3458999999


Q ss_pred             CCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           76 CNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        76 ~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++|+|.+++...+ ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++....
T Consensus       108 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~----------------------~l~~LH~~~ivH~dlkp~NIll~~~  164 (336)
T 3fhr_A          108 MEGGELFSRIQERGDQAFTEREAAEIMRDIGT----------------------AIQFLHSHNIAHRDVKPENLLYTSK  164 (336)
T ss_dssp             CTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEESCS
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCCCCHHHEEEEec
Confidence            99999999998753 25899999999998887                      8888899999999999999998754

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.84  E-value=2.2e-21  Score=136.35  Aligned_cols=127  Identities=19%  Similarity=0.237  Sum_probs=100.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCH---HHHHHHHHHHHHHHhc----CCCceeeeeeEEecCCceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE---KTWEAFKLEVTTFRKT----RHENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~---~~~~~~~~e~~~l~~l----~h~niv~~~~~~~~~~~~~l   71 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+........   .....+.+|+..+..+    +||||+++++++...+..++
T Consensus        36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~  115 (312)
T 2iwi_A           36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML  115 (312)
T ss_dssp             EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred             eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence            4679999999999998744   599999976432111   1233455788888888    89999999999999899999


Q ss_pred             EEec-CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           72 VTSK-CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        72 v~e~-~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ++|+ +.+++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++.
T Consensus       116 v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------~l~~lH~~~i~H~dlkp~Nil~  172 (312)
T 2iwi_A          116 VLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVA----------------------AIQHCHSRGVVHRDIKDENILI  172 (312)
T ss_dssp             EEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHHTEECCCCSGGGEEE
T ss_pred             EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecCCChhhEEE
Confidence            9999 78999999998755 7999999999998777                      8888999999999999999998


Q ss_pred             c
Q psy697          151 R  151 (157)
Q Consensus       151 ~  151 (157)
                      .
T Consensus       173 ~  173 (312)
T 2iwi_A          173 D  173 (312)
T ss_dssp             E
T ss_pred             e
Confidence            6

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.83  E-value=5e-21  Score=135.17  Aligned_cols=129  Identities=22%  Similarity=0.281  Sum_probs=101.3

Q ss_pred             CCccccCceeeEEEEEEe-c---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc---CCCceeeeeeEEe-----cCCce
Q psy697            2 GDRIGKGHFGTVYNGNWH-G---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT---RHENLVLFMGACM-----KPPHL   69 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~-~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~-----~~~~~   69 (157)
                      .+.||+|+||.||+|.+. .   .+|+|.+.... ........+.+|+.++..+   +||||+++++++.     .....
T Consensus        16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~   94 (326)
T 1blx_A           16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-GEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL   94 (326)
T ss_dssp             EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEB-CTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred             eeeecccccEEEEEEEecCCCCEEEEEEEeccCc-ccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceE
Confidence            468999999999999984 2   48999987543 1122223445666666555   8999999999987     45678


Q ss_pred             EEEEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccc
Q psy697           70 AIVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLN  148 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~  148 (157)
                      +++|||++ |+|.+++.... ..+++..+..++.|++.                      +|.++|+++++|||+|+.|+
T Consensus        95 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~gi~H~dlkp~Ni  151 (326)
T 1blx_A           95 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLR----------------------GLDFLHSHRVVHRDLKPQNI  151 (326)
T ss_dssp             EEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGE
T ss_pred             EEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCceeccCCHHHe
Confidence            99999997 69999998753 24899999999998777                      78888889999999999999


Q ss_pred             cccccc
Q psy697          149 LSRSAE  154 (157)
Q Consensus       149 ~~~~~~  154 (157)
                      +....+
T Consensus       152 li~~~~  157 (326)
T 1blx_A          152 LVTSSG  157 (326)
T ss_dssp             EECTTC
T ss_pred             EEcCCC
Confidence            986543

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.83  E-value=1.1e-20  Score=131.68  Aligned_cols=121  Identities=21%  Similarity=0.302  Sum_probs=99.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEE-ecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC-MKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+....     ....+..|+.++..++|++++..+..+ ...+..+++|||+ 
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-   87 (296)
T 4hgt_A           14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-   87 (296)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             eeeecCCCCeEEEEEEEcCCCceEEEEeecccc-----cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-
Confidence            4689999999999999744   49999876532     223477899999999888776666555 5567889999999 


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      +++|.+++...+..+++..+..++.|++.                      +|.++|+++++|||+|+.|++.
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~LH~~~ivH~Dlkp~NIl~  138 (296)
T 4hgt_A           88 GPSLEDLFNFCSRKFSLKTVLLLADQMIS----------------------RIEYIHSKNFIHRDVKPDNFLM  138 (296)
T ss_dssp             CCBHHHHHHHTTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEE
T ss_pred             CCCHHHHHHHhcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeecCCCCHHHeee
Confidence            99999999865557999999999998888                      7888888999999999999998

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.83  E-value=4.4e-20  Score=128.66  Aligned_cols=122  Identities=21%  Similarity=0.291  Sum_probs=101.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEE-ecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGAC-MKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~~   77 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.....     .+.+.+|+.++..++|++++..+..+ ...+..+++|||+ 
T Consensus        14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-   87 (296)
T 3uzp_A           14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-   87 (296)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence            4679999999999999744   599999876431     23478899999999888766655555 5567789999999 


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +++|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~----------------------~l~~lH~~~ivH~dlkp~NIl~~  139 (296)
T 3uzp_A           88 GPSLEDLFNFCSRKFSLKTVLLLADQMIS----------------------RIEYIHSKNFIHRDVKPDNFLMG  139 (296)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEEC
T ss_pred             CCCHHHHHHhhccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeCCCCHHHeEEe
Confidence            89999999865557999999999998888                      78888889999999999999984

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.83  E-value=5.5e-21  Score=135.03  Aligned_cols=127  Identities=18%  Similarity=0.257  Sum_probs=106.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCH---HHHHHHHHHHHHHHhcC--CCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE---KTWEAFKLEVTTFRKTR--HENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~---~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|....   .+|+|.+........   .....+.+|+.++..++  |||++++++++...+..++++
T Consensus        48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~  127 (320)
T 3a99_A           48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL  127 (320)
T ss_dssp             EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred             EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence            4689999999999998754   499999976432110   12234567889999995  599999999999999999999


Q ss_pred             ecCCC-CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           74 SKCNG-HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        74 e~~~~-g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      |++.+ ++|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..
T Consensus       128 e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~----------------------~L~~LH~~~ivH~Dlkp~NIll~  183 (320)
T 3a99_A          128 ERPEPVQDLFDFITERG-ALQEELARSFFWQVLE----------------------AVRHCHNCGVLHRDIKDENILID  183 (320)
T ss_dssp             ECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEEE
T ss_pred             EcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCcEeCCCCHHHEEEe
Confidence            99986 89999998755 7999999999998777                      88888999999999999999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.83  E-value=8.9e-20  Score=135.32  Aligned_cols=123  Identities=21%  Similarity=0.253  Sum_probs=102.1

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC-CceeeeeeEEecCCceEEEEecC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH-ENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +++.||+|+||.||+|.+..   .||+|++.....     ...+..|+.++..+.| +++..+..++......+++|||+
T Consensus        11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A           11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            46889999999999999753   599998876431     1246789999999976 55666666667778889999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                       +++|.+++......+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|..
T Consensus        86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~----------------------aL~yLH~~gIvHrDIKP~NILl~  137 (483)
T 3sv0_A           86 -GPSLEDLFNFCSRKLSLKTVLMLADQMIN----------------------RVEFVHSKSFLHRDIKPDNFLMG  137 (483)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEEC
T ss_pred             -CCCHHHHHHhhcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEeecccCcceEEEe
Confidence             99999999875557999999999998887                      88889999999999999999984

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.83  E-value=1.7e-20  Score=140.90  Aligned_cols=119  Identities=15%  Similarity=0.075  Sum_probs=89.9

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEeccCCCCCHH-----HHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEK-----TWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +.||+|+||.||++...+ .+++|...........     ..+.+.+|+.++++++||||+++..++...+..+++|||+
T Consensus       342 ~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~  421 (540)
T 3en9_A          342 HLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYI  421 (540)
T ss_dssp             ------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECC
T ss_pred             CEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECC
Confidence            579999999999997655 5888876543322221     2456899999999999999996666666777889999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++++|.+++..         +..++.|++.                      +|+++|+++|+|||+|+.|++...
T Consensus       422 ~ggsL~~~l~~---------~~~i~~qi~~----------------------aL~~LH~~gIiHrDiKp~NILl~~  466 (540)
T 3en9_A          422 NGKLAKDVIED---------NLDIAYKIGE----------------------IVGKLHKNDVIHNDLTTSNFIFDK  466 (540)
T ss_dssp             CSEEHHHHSTT---------CTHHHHHHHH----------------------HHHHHHHTTEECTTCCTTSEEESS
T ss_pred             CCCCHHHHHHH---------HHHHHHHHHH----------------------HHHHHHHCcCccCCCCHHHEEECC
Confidence            99999999875         3356665555                      888899999999999999999765

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.82  E-value=2.4e-20  Score=133.35  Aligned_cols=124  Identities=19%  Similarity=0.090  Sum_probs=87.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc-------eEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH-------LAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-------~~l   71 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+....    ........++..+..++||||+++++++...+.       +++
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~l  103 (360)
T 3e3p_A           28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP----RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV  103 (360)
T ss_dssp             C----------CEEEEETTTCCEEEEEEEECCT----TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEE
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEecCc----cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEE
Confidence            5789999999999999864   49999886532    223345667788888999999999999976433       889


Q ss_pred             EEecCCCCCHhHHHhh---hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc--cccccccCCCCc
Q psy697           72 VTSKCNGHTLYTNIHI---YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP--KKRILARSPSHP  146 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~--~~~~~~rd~k~~  146 (157)
                      +|||+++ +|.+.+..   ....+++..+..++.|++.                      +++++|  +++++|||+|+.
T Consensus       104 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------al~~lH~~~~~ivH~Dlkp~  160 (360)
T 3e3p_A          104 VMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIR----------------------SIGCLHLPSVNVCHRDIKPH  160 (360)
T ss_dssp             EEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHH----------------------HHHHHTSTTTCCBCSCCCGG
T ss_pred             Eeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHH----------------------HHHHHhCCCCCeecCcCCHH
Confidence            9999976 55554432   2336888889999988877                      666677  889999999999


Q ss_pred             cccccc
Q psy697          147 LNLSRS  152 (157)
Q Consensus       147 ~~~~~~  152 (157)
                      |++...
T Consensus       161 NIll~~  166 (360)
T 3e3p_A          161 NVLVNE  166 (360)
T ss_dssp             GEEEET
T ss_pred             HEEEeC
Confidence            999875

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.82  E-value=3.9e-20  Score=135.17  Aligned_cols=122  Identities=23%  Similarity=0.176  Sum_probs=97.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      .+.||+|+||.||+|.+..   .||+|.+.....       ...+|+.+++.++||||+++++++...      ..++++
T Consensus        59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv  131 (420)
T 1j1b_A           59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV  131 (420)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred             eeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence            4679999999999999854   499999865321       123689999999999999999988542      236789


Q ss_pred             EecCCCCCHhHHHhh---hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           73 TSKCNGHTLYTNIHI---YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      |||+++ ++.+.+..   .+..+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|
T Consensus       132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDlkp~NIL  188 (420)
T 1j1b_A          132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR----------------------SLAYIHSFGICHRDIKPQNLL  188 (420)
T ss_dssp             EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECSCCSGGGEE
T ss_pred             hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccccCCChhhEE
Confidence            999975 67666653   2346899999999998777                      888889999999999999999


Q ss_pred             cccc
Q psy697          150 SRSA  153 (157)
Q Consensus       150 ~~~~  153 (157)
                      ....
T Consensus       189 l~~~  192 (420)
T 1j1b_A          189 LDPD  192 (420)
T ss_dssp             EETT
T ss_pred             EeCC
Confidence            8743

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.82  E-value=8.4e-21  Score=139.17  Aligned_cols=122  Identities=21%  Similarity=0.190  Sum_probs=97.9

Q ss_pred             CCccccCceeeEEEE-EEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNG-NWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~-~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.|+.. ...+ .||+|.+.....      ..+.+|+.++..+ +||||+++++++......+++||||+ 
T Consensus        29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-  101 (432)
T 3p23_A           29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-  101 (432)
T ss_dssp             EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence            367999999996543 3333 599999865321      1245789999999 89999999999999999999999996 


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+++.......++..+..++.|++.                      +|+++|+++|+|||+|+.|++...
T Consensus       102 g~L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrDlKp~NIll~~  153 (432)
T 3p23_A          102 ATLQEYVEQKDFAHLGLEPITLLQQTTS----------------------GLAHLHSLNIVHRDLKPHNILISM  153 (432)
T ss_dssp             EEHHHHHHSSSCCCCSSCHHHHHHHHHH----------------------HHHHHHHTTCCCCCCSTTSEEECC
T ss_pred             CCHHHHHHhcCCCccchhHHHHHHHHHH----------------------HHHHHHHCcCEeCCCCHHHEEEec
Confidence            5999999876545666667777777666                      888899999999999999999853

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.82  E-value=4.5e-20  Score=133.85  Aligned_cols=120  Identities=22%  Similarity=0.205  Sum_probs=95.0

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCc------eEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPH------LAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------~~lv~   73 (157)
                      .+.||+|+||.||+|.+..  .+|+|.+.....       ...+|+.+++.++||||+++++++...+.      ++++|
T Consensus        45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~  117 (394)
T 4e7w_A           45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL  117 (394)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence            4689999999999999855  488888765321       12358999999999999999999865433      88999


Q ss_pred             ecCCCCCHhHHHhh---hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           74 SKCNGHTLYTNIHI---YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        74 e~~~~g~L~~~i~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ||++++ +.+.+..   .+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.
T Consensus       118 e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------aL~~LH~~~ivHrDlkp~Nill  174 (394)
T 4e7w_A          118 EYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLR----------------------SLAYIHSIGICHRDIKPQNLLL  174 (394)
T ss_dssp             ECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEE
T ss_pred             eccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCccCCCCCHHHEEE
Confidence            999764 4444332   1336899999999998777                      8888899999999999999998


Q ss_pred             c
Q psy697          151 R  151 (157)
Q Consensus       151 ~  151 (157)
                      .
T Consensus       175 ~  175 (394)
T 4e7w_A          175 D  175 (394)
T ss_dssp             E
T ss_pred             c
Confidence            6

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.82  E-value=5e-20  Score=131.20  Aligned_cols=123  Identities=20%  Similarity=0.267  Sum_probs=102.9

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCc------eeeeeeEEecCCceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN------LVLFMGACMKPPHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~~~l   71 (157)
                      .+.||+|+||.||+|....    .+|+|++..    .....+.+.+|+.++..++|++      ++.+.+++...+..++
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l   99 (355)
T 2eu9_A           24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRN----VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCI   99 (355)
T ss_dssp             EEEEEEETTEEEEEEEETTTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEE
T ss_pred             EEEeeccCCeEEEEEEecCCCceEEEEEEEcc----cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEE
Confidence            4679999999999998743    499999974    2455677888999999887665      8999999999999999


Q ss_pred             EEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           72 VTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      +|||+ ++++.+.+.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++.
T Consensus       100 v~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------~L~~lH~~~ivH~Dlkp~NIll  156 (355)
T 2eu9_A          100 AFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCH----------------------ALRFLHENQLTHTDLKPENILF  156 (355)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECCCCCGGGEEE
T ss_pred             EEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCcccCCCCHHHEEE
Confidence            99999 667777776543 36899999999998887                      8888899999999999999998


Q ss_pred             c
Q psy697          151 R  151 (157)
Q Consensus       151 ~  151 (157)
                      .
T Consensus       157 ~  157 (355)
T 2eu9_A          157 V  157 (355)
T ss_dssp             S
T ss_pred             e
Confidence            4

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.82  E-value=3e-20  Score=133.34  Aligned_cols=124  Identities=19%  Similarity=0.264  Sum_probs=104.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-----------CCceeeeeeEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-----------HENLVLFMGACMKPP   67 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~~~   67 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+..    +......+.+|+.++..++           ||||+++++++...+
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~   99 (373)
T 1q8y_A           24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG----DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   99 (373)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECS----CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             EEeeeecCCeEEEEEEecCCCcEEEEEEecC----CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC
Confidence            4689999999999999754   499999974    3445677888998888875           899999999987654


Q ss_pred             ----ceEEEEecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-ccccc
Q psy697           68 ----HLAIVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILAR  141 (157)
Q Consensus        68 ----~~~lv~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~r  141 (157)
                          .++++|||+ +++|.+++.... ..+++..+..++.|++.                      +|+++|++ +++||
T Consensus       100 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~lH~~~~ivH~  156 (373)
T 1q8y_A          100 PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLL----------------------GLDYMHRRCGIIHT  156 (373)
T ss_dssp             TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCEECS
T ss_pred             CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHH----------------------HHHHHHhcCCEEec
Confidence                789999999 889999998743 35899999999988777                      88888988 99999


Q ss_pred             CCCCccccccc
Q psy697          142 SPSHPLNLSRS  152 (157)
Q Consensus       142 d~k~~~~~~~~  152 (157)
                      |+|+.|++...
T Consensus       157 Dikp~NIll~~  167 (373)
T 1q8y_A          157 DIKPENVLMEI  167 (373)
T ss_dssp             CCSGGGEEEEE
T ss_pred             CCChHHeEEec
Confidence            99999999853

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.81  E-value=2.9e-20  Score=136.38  Aligned_cols=123  Identities=20%  Similarity=0.196  Sum_probs=94.9

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||+||.+....  .+|+|.+...      ..+.+.+|+.++..+ +||||+++++++...+.++++||||+ 
T Consensus        20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-   92 (434)
T 2rio_A           20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-   92 (434)
T ss_dssp             EEEEEECSTTCEEEEEESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred             cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence            3679999999997654422  5999998652      234567899999876 89999999999999999999999995 


Q ss_pred             CCHhHHHhhhccc------CCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEK------FALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+++...+..      .++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus        93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~----------------------aL~~LH~~~ivHrDLkp~NILl~~  150 (434)
T 2rio_A           93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS----------------------GVAHLHSLKIIHRDLKPQNILVST  150 (434)
T ss_dssp             EEHHHHHHTC------------CCHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEEEC
T ss_pred             CCHHHHHhccCCCchhhhhccchhHHHHHHHHHH----------------------HHHHHHHCCccccCCChHhEEEec
Confidence            6999999864311      122234556666666                      888899999999999999999865


Q ss_pred             c
Q psy697          153 A  153 (157)
Q Consensus       153 ~  153 (157)
                      .
T Consensus       151 ~  151 (434)
T 2rio_A          151 S  151 (434)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.81  E-value=2.6e-19  Score=129.28  Aligned_cols=124  Identities=23%  Similarity=0.230  Sum_probs=102.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CC-----ceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HE-----NLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~~~~lv   72 (157)
                      .+.||+|+||.||+|....   .+|+|++..    .......+..|+.++..++ |+     +++++++++...+..+++
T Consensus        59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  134 (382)
T 2vx3_A           59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLV  134 (382)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEECS----SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEE
T ss_pred             EEEEeecCCEEEEEEEEcCCCcEEEEEEEec----cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEE
Confidence            4679999999999999864   499999974    2345667778888888774 55     499999999999999999


Q ss_pred             EecCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc--cccccccCCCCcccc
Q psy697           73 TSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP--KKRILARSPSHPLNL  149 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~--~~~~~~rd~k~~~~~  149 (157)
                      |||++ ++|.+++.... ..+++..+..++.|++.                      +|.++|  +.+|+|||+|+.|++
T Consensus       135 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------al~~lH~~~~~ivHrDlkp~NIl  191 (382)
T 2vx3_A          135 FEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCT----------------------ALLFLATPELSIIHCDLKPENIL  191 (382)
T ss_dssp             EECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHH----------------------HHHHHTSTTTCEECCCCSGGGEE
T ss_pred             EecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHH----------------------HHHHhccCCCCEEcCCCCcccEE
Confidence            99996 59999998753 35899999999998888                      666666  468999999999999


Q ss_pred             ccc
Q psy697          150 SRS  152 (157)
Q Consensus       150 ~~~  152 (157)
                      ...
T Consensus       192 l~~  194 (382)
T 2vx3_A          192 LCN  194 (382)
T ss_dssp             ESS
T ss_pred             Eec
Confidence            854

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.75  E-value=1.3e-18  Score=121.05  Aligned_cols=116  Identities=17%  Similarity=0.172  Sum_probs=86.5

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCH---------------HHHHHHHHHHHHHHhcCCCceeeeeeEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDE---------------KTWEAFKLEVTTFRKTRHENLVLFMGACM   64 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~---------------~~~~~~~~e~~~l~~l~h~niv~~~~~~~   64 (157)
                      ++.||+|+||.||+|.+..  .+|+|.++.......               .....+.+|+.++..++  | +++.+++.
T Consensus        95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~  171 (282)
T 1zar_A           95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA  171 (282)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred             cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence            3789999999999999832  599999975321100               24567889999999998  4 56666543


Q ss_pred             cCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           65 KPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        65 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                      . +..+++|||+++++|.+ +..       .....++.|++.                      +++++|+++++|||+|
T Consensus       172 ~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~----------------------~l~~lH~~giiHrDlk  220 (282)
T 1zar_A          172 W-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILE----------------------EVAKFYHRGIVHGDLS  220 (282)
T ss_dssp             E-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHH----------------------HHHHHHHTTEECSCCS
T ss_pred             c-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHH----------------------HHHHHHHCCCEeCCCC
Confidence            3 55699999999999988 432       122346665555                      8888999999999999


Q ss_pred             Ccccccc
Q psy697          145 HPLNLSR  151 (157)
Q Consensus       145 ~~~~~~~  151 (157)
                      +.|++..
T Consensus       221 p~NILl~  227 (282)
T 1zar_A          221 QYNVLVS  227 (282)
T ss_dssp             TTSEEEE
T ss_pred             HHHEEEE
Confidence            9999987

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.72  E-value=6.7e-18  Score=123.13  Aligned_cols=130  Identities=12%  Similarity=0.005  Sum_probs=90.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC-Ccee---------------ee---
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH-ENLV---------------LF---   59 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv---------------~~---   59 (157)
                      ++.||+|+||.||+|.+..   .+|||++...........+.+.+|+.++..+.| +|..               .+   
T Consensus        83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (413)
T 3dzo_A           83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK  162 (413)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred             ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence            3679999999999999864   599999885432333346778899999998876 2211               11   


Q ss_pred             ---eeEEec-----CCceEEEEecCCCCCHhHHHhhh------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHH
Q psy697           60 ---MGACMK-----PPHLAIVTSKCNGHTLYTNIHIY------KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFIT  125 (157)
Q Consensus        60 ---~~~~~~-----~~~~~lv~e~~~~g~L~~~i~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~  125 (157)
                         ...+..     ....+++|+++ +++|.+++...      +..+++..+..++.|++.                   
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~-------------------  222 (413)
T 3dzo_A          163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIR-------------------  222 (413)
T ss_dssp             --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHH-------------------
T ss_pred             CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHH-------------------
Confidence               011111     23456777765 67999998521      235777788888887777                   


Q ss_pred             HHHHHhccccccccccCCCCccccccccc
Q psy697          126 LMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       126 i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                         +|+++|+++|+|||+|+.|+|.....
T Consensus       223 ---aL~~LH~~~iiHrDiKp~NILl~~~~  248 (413)
T 3dzo_A          223 ---LLASLHHYGLVHTYLRPVDIVLDQRG  248 (413)
T ss_dssp             ---HHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             ---HHHHHHhCCcccCCcccceEEEecCC
Confidence               88889999999999999999987654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.66  E-value=4.6e-17  Score=111.85  Aligned_cols=121  Identities=12%  Similarity=0.089  Sum_probs=83.8

Q ss_pred             CCccccCceeeEEEEEE-ec--c--eEEEEeccCCCCC---------------------HHHHHHHHHHHHHHHhcCCCc
Q psy697            2 GDRIGKGHFGTVYNGNW-HG--E--VAVKVLDVDYLDD---------------------EKTWEAFKLEVTTFRKTRHEN   55 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~-~~--~--~avk~~~~~~~~~---------------------~~~~~~~~~e~~~l~~l~h~n   55 (157)
                      .+.||+|+||.||+|.+ ..  .  +|+|++.......                     ......+.+|+..+..+.|++
T Consensus        52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~  131 (258)
T 1zth_A           52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG  131 (258)
T ss_dssp             EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence            35799999999999998 22  5  9999876432100                     011246788999999997775


Q ss_pred             e--eeeeeEEecCCceEEEEecCCC-C----CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHH
Q psy697           56 L--VLFMGACMKPPHLAIVTSKCNG-H----TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMK  128 (157)
Q Consensus        56 i--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~  128 (157)
                      +  +.++..    +..+++|||+.+ |    +|.+....    .++..+..++.|++.                      
T Consensus       132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~----------------------  181 (258)
T 1zth_A          132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVE----------------------  181 (258)
T ss_dssp             CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHH----------------------
T ss_pred             CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHH----------------------
Confidence            4  333332    356899999942 4    56554432    234556667776666                      


Q ss_pred             HHhccc-cccccccCCCCccccccc
Q psy697          129 SLEKLP-KKRILARSPSHPLNLSRS  152 (157)
Q Consensus       129 ~l~~~~-~~~~~~rd~k~~~~~~~~  152 (157)
                      ++.++| +.+++|||+|+.|++...
T Consensus       182 ~l~~lH~~~givHrDlkp~NILl~~  206 (258)
T 1zth_A          182 NVKRLYQEAELVHADLSEYNIMYID  206 (258)
T ss_dssp             HHHHHHHTSCEECSSCSTTSEEESS
T ss_pred             HHHHHHHHCCEEeCCCCHHHEEEcC
Confidence            777888 889999999999999764

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.57  E-value=2.5e-16  Score=113.32  Aligned_cols=120  Identities=13%  Similarity=0.096  Sum_probs=76.7

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCC--------------CHH-----HHHHHHHHHHHHHhcCCCcee--e
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLD--------------DEK-----TWEAFKLEVTTFRKTRHENLV--L   58 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~--------------~~~-----~~~~~~~e~~~l~~l~h~niv--~   58 (157)
                      ++.||+|++|.||+|....  .+|+|+++.....              ...     ..-....|...+.++.+.++.  .
T Consensus       100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~  179 (397)
T 4gyi_A          100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE  179 (397)
T ss_dssp             EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred             cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence            5679999999999998754  5999987542100              000     011223455566665433322  2


Q ss_pred             eeeEEecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccc
Q psy697           59 FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRI  138 (157)
Q Consensus        59 ~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~  138 (157)
                      .++.    ...+++|||+++++|.++..       .+....+..|++.                      ++.++|+.++
T Consensus       180 p~~~----~~~~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~----------------------~l~~lH~~gI  226 (397)
T 4gyi_A          180 PIAQ----SRHTIVMSLVDALPMRQVSS-------VPDPASLYADLIA----------------------LILRLAKHGL  226 (397)
T ss_dssp             EEEE----ETTEEEEECCSCEEGGGCCC-------CSCHHHHHHHHHH----------------------HHHHHHHTTE
T ss_pred             eeec----cCceEEEEecCCccHhhhcc-------cHHHHHHHHHHHH----------------------HHHHHHHCCC
Confidence            2211    12369999999888765432       1222345554444                      8888999999


Q ss_pred             cccCCCCccccccccc
Q psy697          139 LARSPSHPLNLSRSAE  154 (157)
Q Consensus       139 ~~rd~k~~~~~~~~~~  154 (157)
                      +|||+|+.|+|....+
T Consensus       227 VHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          227 IHGDFNEFNILIREEK  242 (397)
T ss_dssp             ECSCCSTTSEEEEEEE
T ss_pred             cCCCCCHHHEEEeCCC
Confidence            9999999999997765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.12  E-value=4.7e-10  Score=76.76  Aligned_cols=140  Identities=11%  Similarity=-0.041  Sum_probs=96.8

Q ss_pred             ccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCCCCH
Q psy697            4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNGHTL   81 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~L   81 (157)
                      .++.|+.+.||++...+ .+++|..+....   .....+.+|..++..+ .+.++.+++++....+..|++|||++|.+|
T Consensus        21 ~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~---~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l   97 (263)
T 3tm0_A           21 DTEGMSPAKVYKLVGENENLYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLC   97 (263)
T ss_dssp             CCSCCSSSEEEEEECSSCEEEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEH
T ss_pred             eccCCCCCeEEEEECCCCcEEEEeCCcccC---CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeeh
Confidence            45667778899997644 699999875211   1123477888888888 467778899888888889999999999998


Q ss_pred             hHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCC-----------------------------------CCCHHHH
Q psy697           82 YTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSD-----------------------------------RPDFITL  126 (157)
Q Consensus        82 ~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------------------------------Rp~~~~i  126 (157)
                      .+.+.      +......++.+++. ++..+|+..+..                                   .+...++
T Consensus        98 ~~~~~------~~~~~~~~~~~l~~-~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  170 (263)
T 3tm0_A           98 SEEYE------DEQSPEKIIELYAE-CIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL  170 (263)
T ss_dssp             HHHCC------TTTCHHHHHHHHHH-HHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred             hhccC------CcccHHHHHHHHHH-HHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence            77532      11223356777777 888888743322                                   2344555


Q ss_pred             HHHHhccc---cccccccCCCCcccccccc
Q psy697          127 MKSLEKLP---KKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       127 ~~~l~~~~---~~~~~~rd~k~~~~~~~~~  153 (157)
                      +..+....   ...++|+|+++.|++....
T Consensus       171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~  200 (263)
T 3tm0_A          171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDG  200 (263)
T ss_dssp             HHHHHHCCCCCCEEEECSSCCTTSEEEETT
T ss_pred             HHHHHhcCCCCCceEECCCCCcCcEEEECC
Confidence            55554332   2568999999999998653

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.91  E-value=9.2e-09  Score=73.50  Aligned_cols=146  Identities=10%  Similarity=0.071  Sum_probs=96.4

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEec--cCCCCCHHHHHHHHHHHHHHHhcC--CCceeeeeeEEecC---CceEEEEe
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVLD--VDYLDDEKTWEAFKLEVTTFRKTR--HENLVLFMGACMKP---PHLAIVTS   74 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~~--~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e   74 (157)
                      +.++.|.++.+|+....+ .+++|...  ...  .......+.+|..++..+.  +.++++++..+...   +..+++||
T Consensus        44 ~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~--~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSK--LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EECCC-CCSCEEEEECSSCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEcCCcccceEEEEEECCceEEEEeCCCCCCC--CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            457889999999988755 58888776  321  1123456778999988885  45577888877665   45899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCC-------------------------------CCH
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDR-------------------------------PDF  123 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~R-------------------------------p~~  123 (157)
                      |++|..+.+...  . .++..+...++.+++. .+..+|+..+..-                               |.+
T Consensus       122 ~v~G~~l~~~~~--~-~l~~~~~~~~~~~l~~-~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (359)
T 3dxp_A          122 FVSGRVLWDQSL--P-GMSPAERTAIYDEMNR-VIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM  197 (359)
T ss_dssp             CCCCBCCCCTTC--T-TCCHHHHHHHHHHHHH-HHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred             ecCCeecCCCcc--c-cCCHHHHHHHHHHHHH-HHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence            999887744211  1 4677888888999999 9999997643321                               222


Q ss_pred             HHHHHHHhccc------cccccccCCCCccccccccc
Q psy697          124 ITLMKSLEKLP------KKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       124 ~~i~~~l~~~~------~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+++..+....      ...++|+|+++.|+++...+
T Consensus       198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~  234 (359)
T 3dxp_A          198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE  234 (359)
T ss_dssp             HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS
T ss_pred             HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC
Confidence            23333332211      24689999999999987653

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.62  E-value=2.1e-07  Score=63.18  Aligned_cols=131  Identities=9%  Similarity=0.040  Sum_probs=85.8

Q ss_pred             cCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCc--eeeeeeEEecCCceEEEEecCCCCCHh
Q psy697            7 KGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN--LVLFMGACMKPPHLAIVTSKCNGHTLY   82 (157)
Q Consensus         7 ~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~g~L~   82 (157)
                      .|..+.||++....  .+++|......      ...+..|..++..+.+.+  +.+++++....+..+++|||++|.++.
T Consensus        30 gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           30 GCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             TTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            45568999997643  59999876531      134667888888774333  456888877777889999999998874


Q ss_pred             HHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCC---------------------------------CCHHHHHHH
Q psy697           83 TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDR---------------------------------PDFITLMKS  129 (157)
Q Consensus        83 ~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~R---------------------------------p~~~~i~~~  129 (157)
                        ..    ..+.   ..++.+++. ++..+|+..+...                                 +...+++..
T Consensus       104 --~~----~~~~---~~~~~~l~~-~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (264)
T 1nd4_A          104 --SS----HLAP---AEKVSIMAD-AMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR  173 (264)
T ss_dssp             --TS----CCCH---HHHHHHHHH-HHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred             --cC----cCCH---hHHHHHHHH-HHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence              21    1121   245666666 7777776542211                                 244455555


Q ss_pred             Hhcc----ccccccccCCCCcccccccc
Q psy697          130 LEKL----PKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       130 l~~~----~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +...    +...++|+|+++.|++....
T Consensus       174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~  201 (264)
T 1nd4_A          174 LKARMPDGEDLVVTHGDACLPNIMVENG  201 (264)
T ss_dssp             HHHTCCSSCCEEEECSSCCGGGEEEETT
T ss_pred             HHHhcCCCCCeEEECCCCCCCcEEEECC
Confidence            4433    23458999999999998653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.24  E-value=2.6e-05  Score=54.37  Aligned_cols=105  Identities=13%  Similarity=0.094  Sum_probs=73.3

Q ss_pred             CccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCc--eeeeeeEEecCC---ceEEEEecC
Q psy697            3 DRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHEN--LVLFMGACMKPP---HLAIVTSKC   76 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~~~~~~~~~~---~~~lv~e~~   76 (157)
                      +.++.|....+|+..  ..+++|....     ......+..|..++..+ .+..  +...+......+   ..|++|+++
T Consensus        26 ~~~~~G~~n~v~~v~--~~~vlR~~~~-----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN--RDFIFKFPKH-----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CEEEECSSEEEEEST--TSEEEEEESS-----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             EecCCCCcceEEEEC--CEEEEEecCC-----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            456778888888764  5688998643     24466788899998887 3333  334444332322   458899999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPS  118 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  118 (157)
                      +|.++.....  . .++..+...++.+++. ++..+|+....
T Consensus        99 ~G~~l~~~~~--~-~l~~~~~~~~~~~l~~-~la~LH~~~~~  136 (304)
T 3sg8_A           99 KGVPLTPLLL--N-NLPKQSQNQAAKDLAR-FLSELHSINIS  136 (304)
T ss_dssp             CCEECCHHHH--H-TSCHHHHHHHHHHHHH-HHHHHHHSCCT
T ss_pred             CCeECCcccc--c-cCCHHHHHHHHHHHHH-HHHHHHcCCCC
Confidence            9988865433  1 5788888899999999 99999976543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.07  E-value=3.9e-05  Score=53.65  Aligned_cols=103  Identities=9%  Similarity=0.072  Sum_probs=72.4

Q ss_pred             ccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCC---ceeeeeeEEe-cCCceEEEEecCCCC
Q psy697            4 RIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE---NLVLFMGACM-KPPHLAIVTSKCNGH   79 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~g   79 (157)
                      .++.|....+|..  .+.+++|+..     .......+..|..++..+.+.   .+.+.+.+.. ..+..+++|||++|.
T Consensus        26 ~l~~G~~n~v~~v--g~~~VlR~~~-----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~   98 (306)
T 3tdw_A           26 SLGEGFRNYAILV--NGDWVFRFPK-----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ   98 (306)
T ss_dssp             EEEECSSEEEEEE--TTTEEEEEES-----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred             ecCCCcceeEEEE--CCEEEEEecC-----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence            4566777788877  4568998853     234566788999999998542   3445555553 346678999999998


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCC
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKP  117 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  117 (157)
                      ++....-  . .++..+...++.+++. .+..+|+...
T Consensus        99 ~l~~~~~--~-~l~~~~~~~~~~~lg~-~La~LH~~~~  132 (306)
T 3tdw_A           99 ILGEDGM--A-VLPDDAKDRLALQLAE-FMNELSAFPV  132 (306)
T ss_dssp             ECHHHHH--T-TSCHHHHHHHHHHHHH-HHHHHHHSCH
T ss_pred             ECchhhh--h-hCCHHHHHHHHHHHHH-HHHHHhcCCc
Confidence            8766422  1 4577777888888888 8888887643

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.90  E-value=0.00072  Score=46.00  Aligned_cols=134  Identities=14%  Similarity=0.061  Sum_probs=84.3

Q ss_pred             Ccee-eEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCCCCHh
Q psy697            8 GHFG-TVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNGHTLY   82 (157)
Q Consensus         8 G~~g-~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~   82 (157)
                      |..+ .||+.....   .+.+|.-+.      .....+..|...+..+ .+-.+.+++.++...+..+++||+++|.++.
T Consensus        35 G~S~~~v~rl~~~~~~~~~~lk~~~~------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~  108 (272)
T 4gkh_A           35 GQSGATIYRLYGKPNAPELFLKHGKG------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF  108 (272)
T ss_dssp             SSSSCEEEEEECCTTCCCEEEEEEET------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred             CCcCCeEEEEEecCCCeEEEEEECCC------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence            4443 578766543   488888654      2355677888888877 3444667788888888899999999998887


Q ss_pred             HHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCC---------------------------------CCHHHHHHH
Q psy697           83 TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDR---------------------------------PDFITLMKS  129 (157)
Q Consensus        83 ~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~R---------------------------------p~~~~i~~~  129 (157)
                      +.....     ......+..+++. .+..+|+..+..-                                 +...++...
T Consensus       109 ~~~~~~-----~~~~~~~~~~l~~-~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (272)
T 4gkh_A          109 QVLEEY-----PDSGENIVDALAV-FLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE  182 (272)
T ss_dssp             HHHHHC-----GGGHHHHHHHHHH-HHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred             ccccCC-----HHHHHHHHHHHHH-HHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence            765432     1222345556666 6666665433222                                 222333333


Q ss_pred             Hhccc----cccccccCCCCcccccccc
Q psy697          130 LEKLP----KKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       130 l~~~~----~~~~~~rd~k~~~~~~~~~  153 (157)
                      +....    ...++|.|+.+.|+++...
T Consensus       183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~  210 (272)
T 4gkh_A          183 MHKLLPFSPDSVVTHGDFSLDNLIFDEG  210 (272)
T ss_dssp             HHTTCCCCCCEEEECSCCCTTSEEEETT
T ss_pred             HHhcccccCCcEEEcCCCCCCeEEEECC
Confidence            33222    1237899999999998654

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.81  E-value=8.7e-05  Score=52.74  Aligned_cols=112  Identities=5%  Similarity=-0.126  Sum_probs=66.8

Q ss_pred             cc-ccCceeeEEEEEEe--------c-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC---CCceeeeeeEEecC---C
Q psy697            4 RI-GKGHFGTVYNGNWH--------G-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR---HENLVLFMGACMKP---P   67 (157)
Q Consensus         4 ~l-g~G~~g~v~~~~~~--------~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~---~   67 (157)
                      .| +.|....+|+....        + .+++|...............+..|..++..+.   ...+.+++.+....   +
T Consensus        27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g  106 (357)
T 3ats_A           27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG  106 (357)
T ss_dssp             EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred             ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence            45 77888889988764        3 58888765421000000133566777776662   23456677666544   4


Q ss_pred             ceEEEEecCCCCCHhHHHhhhc-----ccCCHHHHHHHHHHHHHHHHHHhhcCC
Q psy697           68 HLAIVTSKCNGHTLYTNIHIYK-----EKFALNKMSTVGQQISQDVLMKCWSYK  116 (157)
Q Consensus        68 ~~~lv~e~~~~g~L~~~i~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~  116 (157)
                      ..+++|||++|.++.+.+...-     ..++..+...++.+++. .+..+|+..
T Consensus       107 ~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~La~LH~~~  159 (357)
T 3ats_A          107 TPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVA-ALATLHSIP  159 (357)
T ss_dssp             SCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHH-HHHHHTTCS
T ss_pred             CceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHH-HHHHHhCCC
Confidence            5789999999877765432110     02455555667777777 777777643

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.45  E-value=0.0027  Score=44.52  Aligned_cols=73  Identities=16%  Similarity=0.142  Sum_probs=54.2

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC---CCceeeeeeEEecCCceEEEEecCCC
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR---HENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +.++.|....+|+....+ .+++|.....      ....+..|...++.+.   ...+++.+.+....+..+++|||+++
T Consensus        42 ~~l~gG~~n~~y~v~~~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           42 EKLYSGEMNEIWLINDEVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             EEECCSSSSEEEEEESSSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             EEeCCccceeeeEEEECCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            356788889999987644 5888887642      2456777877777762   35677888777777889999999998


Q ss_pred             CCH
Q psy697           79 HTL   81 (157)
Q Consensus        79 g~L   81 (157)
                      ..+
T Consensus       116 ~~~  118 (312)
T 3jr1_A          116 SKN  118 (312)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            754

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.03  E-value=0.0035  Score=43.17  Aligned_cols=71  Identities=14%  Similarity=0.071  Sum_probs=46.0

Q ss_pred             CccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC---CceeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH---ENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.+|.|..+.||+.+..+  ++.+|..+...   ......+..|...|+.+..   -.+.+.++.    +.-+++|||.+
T Consensus        21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~---~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~   93 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELADGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVD   93 (288)
T ss_dssp             EEEEEETTEEEEEEEETTSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCC
T ss_pred             EecCCCCCeEEEEEEECCCCEEEEEEeCCCC---cchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeec
Confidence            456888999999998754  58999876432   1223346778888777732   223444443    23478999997


Q ss_pred             CCC
Q psy697           78 GHT   80 (157)
Q Consensus        78 ~g~   80 (157)
                      ++.
T Consensus        94 ~~~   96 (288)
T 3f7w_A           94 ERP   96 (288)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.83  E-value=0.0083  Score=43.21  Aligned_cols=76  Identities=12%  Similarity=0.061  Sum_probs=45.6

Q ss_pred             CccccCceeeEEEEEEe---cceEEEEeccCCC-CCH---HHHHHHHHHHHHHHhcCC--C-ceeeeeeEEecCCceEEE
Q psy697            3 DRIGKGHFGTVYNGNWH---GEVAVKVLDVDYL-DDE---KTWEAFKLEVTTFRKTRH--E-NLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~---~~~avk~~~~~~~-~~~---~~~~~~~~e~~~l~~l~h--~-niv~~~~~~~~~~~~~lv   72 (157)
                      +.+|.|.++.||++...   ..+++|....... ...   .....+..|..++..+..  | .+.+++.+  ..+..+++
T Consensus        36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv  113 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  113 (397)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence            46889999999999643   3589998654210 000   112345667777776632  3 33455543  34456899


Q ss_pred             EecCCCCC
Q psy697           73 TSKCNGHT   80 (157)
Q Consensus        73 ~e~~~~g~   80 (157)
                      ||++++..
T Consensus       114 mE~l~g~~  121 (397)
T 2olc_A          114 MEDLSHLK  121 (397)
T ss_dssp             ECCCTTSE
T ss_pred             EEeCCCcc
Confidence            99997643

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.61  E-value=0.057  Score=37.64  Aligned_cols=71  Identities=14%  Similarity=0.112  Sum_probs=37.4

Q ss_pred             ccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-----CCCceeeee-e--EEecCCceEEEEe
Q psy697            4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-----RHENLVLFM-G--ACMKPPHLAIVTS   74 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~-~--~~~~~~~~~lv~e   74 (157)
                      .++.|..+.+|+....+ .+++|.....    ..   .+..|..++..+     ..|.++... +  +....+..+++++
T Consensus        39 ~l~gG~~n~~~~v~~~~~~~vlk~~~~~----~~---~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           39 VIQGNQMALVWKVHTDSGAVCLKRIHRP----EK---KALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             ECC----CEEEEEEETTEEEEEEEECSC----HH---HHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eccccccCcEEEEEeCCCCEEEEecCCC----HH---HHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            34556778899987654 5889988652    21   222333333322     234443311 1  1123567899999


Q ss_pred             cCCCCCH
Q psy697           75 KCNGHTL   81 (157)
Q Consensus        75 ~~~~g~L   81 (157)
                      |++|.++
T Consensus       112 ~i~G~~~  118 (346)
T 2q83_A          112 WIEGRPF  118 (346)
T ss_dssp             CCCCBCC
T ss_pred             eecCccC
Confidence            9998654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=96.21  E-value=0.0058  Score=42.57  Aligned_cols=36  Identities=19%  Similarity=0.473  Sum_probs=30.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccccccccC
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARS  142 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd  142 (157)
                      +++..||+.+|..||++.++...|+.+......+.|
T Consensus       261 ~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~~ld  296 (299)
T 4asz_A          261 ELMLGCWQREPHMRKNIKGIHTLLQNLAKASPVYLD  296 (299)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCCCSC
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCcccc
Confidence            599999999999999999999999888765544444

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=96.17  E-value=0.0068  Score=42.83  Aligned_cols=31  Identities=19%  Similarity=0.533  Sum_probs=27.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      +++..||+.+|..||++.+++..|+.+.+..
T Consensus       291 ~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          291 AIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             HHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence            5999999999999999999999998876643

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.00  E-value=0.1  Score=37.84  Aligned_cols=74  Identities=9%  Similarity=-0.014  Sum_probs=41.4

Q ss_pred             CccccCceeeEEEEEEec-ceEEEEeccCCC--CCH----HHHHHHHHHHHHHH-hcCCCceeeeeeEEecCCceEEEEe
Q psy697            3 DRIGKGHFGTVYNGNWHG-EVAVKVLDVDYL--DDE----KTWEAFKLEVTTFR-KTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~--~~~----~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      +.+|.|..+.||++...+ .+++|.......  ...    .....+..|+..+. ......+.+++.+.  .+..+++||
T Consensus        40 ~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~e  117 (420)
T 2pyw_A           40 KEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGMR  117 (420)
T ss_dssp             EECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEEC
T ss_pred             EEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEEe
Confidence            457889899999997543 588994322110  100    02233333433222 22233455666554  566789999


Q ss_pred             cC-CC
Q psy697           75 KC-NG   78 (157)
Q Consensus        75 ~~-~~   78 (157)
                      |+ ++
T Consensus       118 ~l~~g  122 (420)
T 2pyw_A          118 YLEPP  122 (420)
T ss_dssp             CCCTT
T ss_pred             ecCCc
Confidence            99 77

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=95.81  E-value=0.14  Score=35.31  Aligned_cols=70  Identities=14%  Similarity=0.174  Sum_probs=38.4

Q ss_pred             CccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCce-eeeeeEEecCCceEEEEecC-CCCC
Q psy697            3 DRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL-VLFMGACMKPPHLAIVTSKC-NGHT   80 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~g~   80 (157)
                      +.++.|....+|+.   +.+.+|+.....   .. ......|..++..+...++ .+++..  ....-++++||+ ++.+
T Consensus        24 ~~l~gG~tN~~~~~---~~~vlR~~~~~~---~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           24 LERLGGLTNLVFRA---GDLCLRIPGKGT---EE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT   94 (301)
T ss_dssp             EEEESCSSEEEEEE---TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred             eEcCCcccccccee---eeEEEECCCCCc---cc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence            45667778889988   678888876421   11 0112345555555422111 344443  333457899999 5544


Q ss_pred             H
Q psy697           81 L   81 (157)
Q Consensus        81 L   81 (157)
                      +
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=95.29  E-value=0.39  Score=33.50  Aligned_cols=135  Identities=4%  Similarity=-0.112  Sum_probs=66.2

Q ss_pred             ccccCceee-EEEEEEe--cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC--CCceeeeeeEEecCCceEEEEecCCC
Q psy697            4 RIGKGHFGT-VYNGNWH--GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR--HENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         4 ~lg~G~~g~-v~~~~~~--~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .++.|.... +|+....  +++++|..+....      ..+..|..++..+.  .-.+.+++......+  +++||++.+
T Consensus        25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~   96 (333)
T 3csv_A           25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD   96 (333)
T ss_dssp             C--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred             ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence            344444333 5666552  3577776544210      11233444444442  223445555433333  789999987


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHH-----------------------------HHHH
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFIT-----------------------------LMKS  129 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~-----------------------------i~~~  129 (157)
                      .++.+.+...  ....   .....+++. .+..+|.......|.+..                             +...
T Consensus        97 ~~l~~~l~~~--~~~~---~~~~~~~~~-~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~  170 (333)
T 3csv_A           97 ALFTEVINND--PAQE---MPLYRAAVD-LLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHR  170 (333)
T ss_dssp             CBHHHHHHHC--GGGH---HHHHHHHHH-HHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHH
T ss_pred             cchHHHhcCC--CccH---HHHHHHHHH-HHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence            7887776542  1221   234455555 666667654433342110                             0000


Q ss_pred             Hhcc------ccccccccCCCCccccccc
Q psy697          130 LEKL------PKKRILARSPSHPLNLSRS  152 (157)
Q Consensus       130 l~~~------~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++.+      ....++|+|+.+.|+++..
T Consensus       171 ~~~l~~~~~~~~~~lvHgD~~~~Nil~~~  199 (333)
T 3csv_A          171 FAQILSAQLEGDMVFVHRDFHAQNLLWLP  199 (333)
T ss_dssp             HHHHHHHHCCSCCEEECSCCSGGGEEECT
T ss_pred             HHHHHHhcccCCCeeEeCCcCcccEEecc
Confidence            1111      2346899999999999865

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=95.24  E-value=0.011  Score=41.24  Aligned_cols=33  Identities=18%  Similarity=0.531  Sum_probs=28.4

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .+.+ ++..||+.+|..||++.++++.|+.+.++
T Consensus       266 ~l~~-li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          266 VMAK-IMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHH-HHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHH-HHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            3444 89999999999999999999999887654

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=95.19  E-value=0.0026  Score=47.08  Aligned_cols=60  Identities=12%  Similarity=0.003  Sum_probs=16.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEE------EEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAV------KVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK   65 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~av------k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~   65 (157)
                      .+.+|   ||.||++.+..   +||+      |...... .+.+....+.++..++...+|||+++.+++...
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~-~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG-VSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCcccccccc-ccccccccccccccccccccccccCCCcceEEe
Confidence            45666   99999999865   4777      5554322 233344567788888888899999999887754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=95.08  E-value=0.37  Score=33.43  Aligned_cols=70  Identities=10%  Similarity=-0.080  Sum_probs=39.7

Q ss_pred             CceeeEEEEEEe-c-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC--CCceeeeeeE-----EecCCceEEEEecCCC
Q psy697            8 GHFGTVYNGNWH-G-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR--HENLVLFMGA-----CMKPPHLAIVTSKCNG   78 (157)
Q Consensus         8 G~~g~v~~~~~~-~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~-----~~~~~~~~lv~e~~~~   78 (157)
                      |....+|+.... + ++++|...... .+   ...+..|..++..+.  .-.+++++..     ....+..+++++|++|
T Consensus        36 g~~n~~y~v~~~~g~~~vlK~~~~~~-~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G  111 (328)
T 1zyl_A           36 SYENRVYQFQDEDRRRFVVKFYRPER-WT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  111 (328)
T ss_dssp             CSSSEEEEECCTTCCCEEEEEECTTT-SC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             CcccceEEEEcCCCCEEEEEEcCCCC-CC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence            556678887653 2 59999986432 12   234455666665552  1223333332     1124556889999987


Q ss_pred             CCH
Q psy697           79 HTL   81 (157)
Q Consensus        79 g~L   81 (157)
                      .++
T Consensus       112 ~~~  114 (328)
T 1zyl_A          112 RQF  114 (328)
T ss_dssp             EEC
T ss_pred             CCC
Confidence            543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=95.03  E-value=0.02  Score=39.61  Aligned_cols=44  Identities=48%  Similarity=0.929  Sum_probs=26.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      .++..|++.++..||++.+++..|+.+..+.   +.+..|..++++.
T Consensus       274 ~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~---~~~~~~~~~~~~~  317 (319)
T 2y4i_B          274 DILLFCWAFEQEERPTFTKLMDMLEKLPKRN---RRLSHPGHFWKSA  317 (319)
T ss_dssp             HHHHHHHCSSTTTSCCHHHHHHHHTTC--------------------
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHHHHHhh---ccCCCCccccccc
Confidence            5999999999999999999999999999876   4455555555543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=94.94  E-value=0.019  Score=40.19  Aligned_cols=27  Identities=30%  Similarity=0.737  Sum_probs=24.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      +++..||+.+|..||+|.+++..|+..
T Consensus       278 ~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          278 ALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            589999999999999999999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=94.65  E-value=0.029  Score=39.25  Aligned_cols=28  Identities=25%  Similarity=0.469  Sum_probs=25.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      .++..||+.+|..||++.+++..|+.+.
T Consensus       272 ~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          272 RLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             HHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            4899999999999999999999988764

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=94.29  E-value=0.29  Score=35.22  Aligned_cols=95  Identities=11%  Similarity=0.114  Sum_probs=49.7

Q ss_pred             ccccCceeeEEEEEEe----------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCc-eeeeeeEEecCCceEEE
Q psy697            4 RIGKGHFGTVYNGNWH----------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN-LVLFMGACMKPPHLAIV   72 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~----------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv   72 (157)
                      .+..|-...+|++...          ..+.+|+....    ......+.+|..+++.+...+ ..++++.+..    .++
T Consensus        57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v  128 (379)
T 3feg_A           57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL  128 (379)
T ss_dssp             EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred             EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence            4555666778888864          25888875321    122445567888887763222 2455555432    389


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCC
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYK  116 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  116 (157)
                      +||++|.++..-      .+..+   .+..++++ .+..+|+.+
T Consensus       129 ~e~i~G~~l~~~------~l~~p---~~~~~ia~-~La~LH~~~  162 (379)
T 3feg_A          129 EQYIPSRPLKTQ------ELREP---VLSAAIAT-KMAQFHGME  162 (379)
T ss_dssp             EECCSEEECCGG------GGGCH---HHHHHHHH-HHHHHHTCC
T ss_pred             EEEecCccCChh------HhCCH---HHHHHHHH-HHHHHhCCC
Confidence            999987554320      11111   23445555 666677654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.23  E-value=0.88  Score=31.42  Aligned_cols=73  Identities=10%  Similarity=-0.033  Sum_probs=37.9

Q ss_pred             ccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-----CCCceeeee-e--EEecCCceEEEEe
Q psy697            4 RIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-----RHENLVLFM-G--ACMKPPHLAIVTS   74 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~-~--~~~~~~~~~lv~e   74 (157)
                      .++.|....+|+....+ .+++|......     ....+..|..++..+     .-|.++... |  .....+..+++++
T Consensus        29 ~i~~G~~n~~~~v~~~~g~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~  103 (322)
T 2ppq_A           29 GIAEGVENSNFLLHTTKDPLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS  103 (322)
T ss_dssp             EECC---EEEEEEEESSCCEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred             ccCCCcccceEEEEeCCccEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence            35567777888887644 58899886521     112234455555544     223333211 1  0112356789999


Q ss_pred             cCCCCCH
Q psy697           75 KCNGHTL   81 (157)
Q Consensus        75 ~~~~g~L   81 (157)
                      |++|..+
T Consensus       104 ~l~G~~~  110 (322)
T 2ppq_A          104 FLEGMWL  110 (322)
T ss_dssp             CCCCBCC
T ss_pred             eCCCcCC
Confidence            9987654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=93.87  E-value=0.032  Score=39.80  Aligned_cols=29  Identities=34%  Similarity=0.823  Sum_probs=26.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..||+.+|..||++.+++..|+.+.+
T Consensus       319 ~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          319 QTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            58999999999999999999999887654

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=92.84  E-value=0.87  Score=33.25  Aligned_cols=69  Identities=14%  Similarity=0.115  Sum_probs=42.2

Q ss_pred             ccccCceeeEEEEEEe----------cceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCce-eeeeeEEecCCceEEE
Q psy697            4 RIGKGHFGTVYNGNWH----------GEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL-VLFMGACMKPPHLAIV   72 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~----------~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv   72 (157)
                      .++.|....+|++...          +.+.+|+....  ..   ...+..|..++..+...++ .++++.+.  +  .++
T Consensus        80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v  150 (429)
T 1nw1_A           80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET---ESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRL  150 (429)
T ss_dssp             EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC---HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEE
T ss_pred             EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEE
Confidence            4566777889999864          35888887431  11   1334568877777633333 45555443  2  388


Q ss_pred             EecCCCCCH
Q psy697           73 TSKCNGHTL   81 (157)
Q Consensus        73 ~e~~~~g~L   81 (157)
                      +||++|.++
T Consensus       151 ~e~l~G~~l  159 (429)
T 1nw1_A          151 EEYIPSRPL  159 (429)
T ss_dssp             ECCCCEEEC
T ss_pred             EEEeCCccc
Confidence            999976444

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=92.58  E-value=0.071  Score=35.90  Aligned_cols=31  Identities=29%  Similarity=0.844  Sum_probs=27.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.+|..||++.++++.|+.+.+++
T Consensus       238 ~li~~~l~~~p~~Rps~~~ll~~l~~l~~~g  268 (269)
T 4hcu_A          238 QIMNHCWRERPEDRPAFSRLLRQLAEIAESG  268 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHHHHHcc
Confidence            4889999999999999999999999887765

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=92.43  E-value=0.076  Score=35.58  Aligned_cols=31  Identities=29%  Similarity=0.844  Sum_probs=27.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.+|..||++.+++..|+.+.+++
T Consensus       236 ~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (267)
T 3t9t_A          236 QIMNHCWRERPEDRPAFSRLLRQLAEIAESG  266 (267)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            4889999999999999999999999887665

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=92.23  E-value=0.11  Score=35.39  Aligned_cols=31  Identities=26%  Similarity=0.657  Sum_probs=26.6

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          102 QQISQDVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       102 ~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      ..+.. ++..|++.+|..||++.++++.|+.+
T Consensus       270 ~~l~~-li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          270 TSLAK-LMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHH-HHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            34445 99999999999999999999998764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=92.19  E-value=0.081  Score=36.14  Aligned_cols=30  Identities=20%  Similarity=0.635  Sum_probs=26.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.+|..||++.+++..|+.+.++
T Consensus       263 ~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          263 MIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            499999999999999999999999887543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=92.14  E-value=0.093  Score=35.15  Aligned_cols=29  Identities=28%  Similarity=0.590  Sum_probs=26.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|++.++..||++.++++.|+.+.+
T Consensus       242 ~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          242 KLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            58999999999999999999999988765

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=92.05  E-value=0.12  Score=34.72  Aligned_cols=31  Identities=35%  Similarity=0.808  Sum_probs=27.2

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.+|..||++.++++.|+.+.++.
T Consensus       236 ~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (268)
T 3sxs_A          236 QIMYSCWHELPEKRPTFQQLLSSIEPLREKD  266 (268)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence            4899999999999999999999999987653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=91.92  E-value=0.087  Score=37.58  Aligned_cols=30  Identities=33%  Similarity=0.965  Sum_probs=27.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..||+.+|..||++.+++..|+.+..+
T Consensus       346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          346 RLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            489999999999999999999999887654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=91.83  E-value=0.13  Score=35.87  Aligned_cols=34  Identities=18%  Similarity=0.519  Sum_probs=29.4

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .+.. ++..|++.+|..||++.++++.|+.+..+.
T Consensus       305 ~l~~-li~~cl~~dp~~Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          305 VMAK-IMRECWYANGAARLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             HHHH-HHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHH-HHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence            3444 999999999999999999999999887653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=91.59  E-value=0.24  Score=33.95  Aligned_cols=31  Identities=23%  Similarity=0.440  Sum_probs=26.8

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      .+.. ++..|++.+|..||++.+++..|+.+.
T Consensus       275 ~l~~-li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          275 AMYS-VASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHH-HHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHH-HHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            3444 899999999999999999999998764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=91.37  E-value=0.15  Score=35.39  Aligned_cols=32  Identities=9%  Similarity=0.351  Sum_probs=28.1

Q ss_pred             HHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          104 ISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       104 i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +.. ++..|++.+|..||++.++++.|+.+.+.
T Consensus       288 l~~-li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          288 LCE-TIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHH-HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            444 89999999999999999999999987754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=91.18  E-value=0.19  Score=34.09  Aligned_cols=31  Identities=26%  Similarity=0.430  Sum_probs=27.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.+|..||++.+++..|+.+..+.
T Consensus       252 ~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          252 TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence            3899999999999999999999998887653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=90.89  E-value=0.18  Score=34.98  Aligned_cols=34  Identities=24%  Similarity=0.666  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          102 QQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       102 ~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++.. ++..|++.+|..||++.++++.|+.+.+.
T Consensus       299 ~~l~~-li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          299 RQMGK-LMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             HHHHH-HHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHH-HHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            34445 99999999999999999999999887764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=90.88  E-value=0.18  Score=33.81  Aligned_cols=27  Identities=26%  Similarity=0.843  Sum_probs=24.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      .++..|++.+|..||++.++++.|+.+
T Consensus       245 ~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          245 KLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            589999999999999999999998764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=90.86  E-value=0.2  Score=34.13  Aligned_cols=30  Identities=13%  Similarity=0.165  Sum_probs=27.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.++++.|+.+..+
T Consensus       255 ~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          255 KYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             HHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            489999999999999999999999887764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=90.72  E-value=0.22  Score=33.93  Aligned_cols=31  Identities=26%  Similarity=0.606  Sum_probs=28.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.++..||++.+++..|+.+..+.
T Consensus       251 ~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  281 (291)
T 1xbb_A          251 DLMNLCWTYDVENRPGFAAVELRLRNYYYDV  281 (291)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            4999999999999999999999999887654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=90.71  E-value=0.14  Score=35.48  Aligned_cols=30  Identities=30%  Similarity=0.658  Sum_probs=27.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+.++
T Consensus       282 ~li~~~l~~dP~~Rps~~ell~~L~~l~~~  311 (318)
T 3lxp_A          282 HLMKNCWETEASFRPTFENLIPILKTVHEK  311 (318)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence            499999999999999999999999988765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=90.62  E-value=0.2  Score=33.91  Aligned_cols=27  Identities=41%  Similarity=0.865  Sum_probs=24.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      .++..|++.++..||++.++++.|+.+
T Consensus       261 ~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          261 NVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            499999999999999999999998764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=90.51  E-value=0.24  Score=33.63  Aligned_cols=31  Identities=26%  Similarity=0.430  Sum_probs=27.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.++..||++.+++..|+.+..+.
T Consensus       252 ~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          252 TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence            4999999999999999999999999887653

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=90.37  E-value=0.21  Score=34.02  Aligned_cols=29  Identities=24%  Similarity=0.645  Sum_probs=26.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|++.++..||++.+++..|+.+..
T Consensus       260 ~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          260 RLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            48999999999999999999999988753

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=90.34  E-value=0.15  Score=35.40  Aligned_cols=29  Identities=21%  Similarity=0.647  Sum_probs=26.2

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|++.+|..||++.+++..|+.+.+
T Consensus       294 ~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          294 MIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            39999999999999999999999987754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=90.08  E-value=0.18  Score=34.68  Aligned_cols=31  Identities=16%  Similarity=0.366  Sum_probs=28.2

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.++..||++.+++..++.++...
T Consensus       269 ~li~~~l~~dp~~Rps~~~il~~l~~l~~~~  299 (310)
T 2wqm_A          269 QLVNMCINPDPEKRPDVTYVYDVAKRMHACT  299 (310)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence            4899999999999999999999999988754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=89.93  E-value=0.18  Score=36.88  Aligned_cols=31  Identities=32%  Similarity=0.803  Sum_probs=27.4

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..||+.++..||++.+++..|+.+....
T Consensus       417 ~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~  447 (450)
T 1k9a_A          417 DVMKNCWHLDAATRPTFLQLREQLEHIRTHE  447 (450)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence            4899999999999999999999998876543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=89.63  E-value=0.36  Score=33.37  Aligned_cols=32  Identities=28%  Similarity=0.446  Sum_probs=27.1

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          101 GQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       101 ~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      ..++.. ++..|++.+|..||++.++++.|+..
T Consensus       278 ~~~l~~-li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          278 VEQLIQ-VALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             HHHHHH-HHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHH-HHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            344555 88899999999999999999999763

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=89.62  E-value=0.26  Score=36.11  Aligned_cols=30  Identities=27%  Similarity=0.823  Sum_probs=27.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.+|..||++.+++..|+.+...
T Consensus       416 ~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          416 NIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            489999999999999999999999987653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=89.52  E-value=0.26  Score=34.31  Aligned_cols=30  Identities=30%  Similarity=0.830  Sum_probs=26.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+..+
T Consensus       307 ~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          307 NLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             HHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            489999999999999999999999988764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=89.48  E-value=0.29  Score=33.97  Aligned_cols=32  Identities=13%  Similarity=0.292  Sum_probs=27.5

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      ++.. ++..|++.+|..||++.+++..|+.+..
T Consensus       287 ~l~~-li~~cl~~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          287 SLKE-TIEDCWDQDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             HHHH-HHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence            3444 8999999999999999999999887764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=89.27  E-value=0.33  Score=34.29  Aligned_cols=30  Identities=13%  Similarity=0.061  Sum_probs=26.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+..+
T Consensus       301 ~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          301 KYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             HHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999998877654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=89.21  E-value=0.23  Score=33.55  Aligned_cols=31  Identities=29%  Similarity=0.758  Sum_probs=27.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.+|..||++.+++..|+.+....
T Consensus       245 ~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~  275 (278)
T 1byg_A          245 EVMKNCWHLDAAMRPSFLQLREQLEHIKTHE  275 (278)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence            4889999999999999999999998876543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=89.05  E-value=0.18  Score=34.67  Aligned_cols=30  Identities=30%  Similarity=0.639  Sum_probs=27.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.+|..||++.+++..|+.+...
T Consensus       254 ~li~~~l~~dP~~Rps~~~l~~~L~~l~~~  283 (310)
T 3s95_A          254 PITVRCCDLDPEKRPSFVKLEHWLETLRMH  283 (310)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            488999999999999999999999888764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=89.01  E-value=0.25  Score=34.39  Aligned_cols=30  Identities=23%  Similarity=0.722  Sum_probs=27.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|+..++..||++.+++..|+.+...
T Consensus       285 ~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          285 QLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            489999999999999999999999887654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=88.90  E-value=0.35  Score=33.40  Aligned_cols=33  Identities=21%  Similarity=0.354  Sum_probs=27.5

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          101 GQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       101 ~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      ..++.. ++..|++.+|..||++.+++..|+.+.
T Consensus       282 ~~~l~~-li~~~l~~dP~~Rps~~ell~~L~~~l  314 (321)
T 2qkw_B          282 LRKFGD-TAVKCLALSSEDRPSMGDVLWKLEYAL  314 (321)
T ss_dssp             HHHHHH-HHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            344445 888999999999999999999988764

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=88.46  E-value=0.53  Score=32.97  Aligned_cols=32  Identities=25%  Similarity=0.345  Sum_probs=27.3

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      ++.. ++..|++.++..||++.++++.|+.+.-
T Consensus       297 ~l~~-li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          297 EIAQ-FLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHH-HHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHH-HHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            3444 9999999999999999999999987543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=88.36  E-value=0.45  Score=33.18  Aligned_cols=30  Identities=30%  Similarity=0.799  Sum_probs=26.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+...
T Consensus       281 ~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          281 QLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            489999999999999999999998877653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=88.27  E-value=0.3  Score=33.72  Aligned_cols=30  Identities=37%  Similarity=0.775  Sum_probs=26.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.++++.|+.+-..
T Consensus       270 ~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          270 AIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            489999999999999999999999877654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=88.26  E-value=0.37  Score=35.28  Aligned_cols=30  Identities=33%  Similarity=0.711  Sum_probs=27.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.+|..||++.+++..|+.+...
T Consensus       412 ~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          412 DLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            489999999999999999999999987653

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=88.16  E-value=0.35  Score=33.29  Aligned_cols=30  Identities=30%  Similarity=0.746  Sum_probs=26.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.++++.|+.+...
T Consensus       235 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~  264 (307)
T 2eva_A          235 SLMTRCWSKDPSQRPSMEEIVKIMTHLMRY  264 (307)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            488999999999999999999999887653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=88.07  E-value=0.31  Score=32.96  Aligned_cols=31  Identities=26%  Similarity=0.697  Sum_probs=26.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.++..||++.+++..|+.+..-.
T Consensus       247 ~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~  277 (289)
T 4fvq_A          247 NLINNCMDYEPDHRPSFRAIIRDLNSLFTPD  277 (289)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence            6899999999999999999999999987654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=87.83  E-value=0.31  Score=34.73  Aligned_cols=30  Identities=27%  Similarity=0.777  Sum_probs=26.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+..+
T Consensus       281 ~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          281 QLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            489999999999999999999999887654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=87.75  E-value=0.26  Score=34.17  Aligned_cols=30  Identities=23%  Similarity=0.749  Sum_probs=26.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.+|..||++.+++..|+.+...
T Consensus       298 ~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          298 SIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            489999999999999999999999876653

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=87.69  E-value=0.33  Score=33.23  Aligned_cols=30  Identities=37%  Similarity=0.843  Sum_probs=26.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.+|..||++.+++..|+.+-.+
T Consensus       283 ~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          283 RLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            489999999999999999999999887654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=87.66  E-value=0.32  Score=32.87  Aligned_cols=30  Identities=37%  Similarity=0.891  Sum_probs=26.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.+|..||++.+++..|+.+.+.
T Consensus       248 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          248 SLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            488999999999999999999999887653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=87.65  E-value=0.35  Score=33.60  Aligned_cols=29  Identities=28%  Similarity=0.761  Sum_probs=26.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|+..++..||++.+++..|+.+..
T Consensus       250 ~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          250 MIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            48899999999999999999999887764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=87.64  E-value=0.42  Score=35.48  Aligned_cols=30  Identities=30%  Similarity=0.898  Sum_probs=26.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+...
T Consensus       450 ~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          450 ELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             HHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence            489999999999999999999999887643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=87.58  E-value=0.33  Score=33.07  Aligned_cols=27  Identities=37%  Similarity=0.983  Sum_probs=24.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      .++..|++.+|..||++.++++.|+.+
T Consensus       274 ~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          274 QLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            499999999999999999999998765

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=87.56  E-value=0.34  Score=32.97  Aligned_cols=30  Identities=30%  Similarity=0.702  Sum_probs=26.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.++++.|+.+...
T Consensus       263 ~li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          263 EVMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            488999999999999999999999887653

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=87.54  E-value=0.5  Score=33.14  Aligned_cols=31  Identities=19%  Similarity=0.284  Sum_probs=27.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.++..||++.+++..|+.+..+.
T Consensus       308 ~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  338 (352)
T 2jii_A          308 KYLKVVMALTYEEKPPYAMLRNNLEALLQDL  338 (352)
T ss_dssp             HHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence            4999999999999999999999999887653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=87.47  E-value=0.38  Score=33.50  Aligned_cols=30  Identities=27%  Similarity=0.705  Sum_probs=27.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|+..++..||++.+++..|+.+...
T Consensus       250 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          250 MIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            489999999999999999999999888753

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=87.31  E-value=0.38  Score=32.46  Aligned_cols=29  Identities=41%  Similarity=0.964  Sum_probs=26.2

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|++.+|..||++.+++..|+.+..
T Consensus       245 ~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          245 TLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            48899999999999999999999987754

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=87.24  E-value=0.36  Score=34.47  Aligned_cols=30  Identities=30%  Similarity=0.702  Sum_probs=27.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+...
T Consensus       327 ~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          327 EVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            488999999999999999999999887754

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=87.16  E-value=0.49  Score=32.78  Aligned_cols=30  Identities=27%  Similarity=0.678  Sum_probs=26.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+...
T Consensus       248 ~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          248 MVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            588999999999999999999999887653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=87.15  E-value=0.52  Score=32.37  Aligned_cols=29  Identities=28%  Similarity=0.452  Sum_probs=26.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|++.+|..||++.+++..|+.+..
T Consensus       278 ~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          278 QLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             HHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            48999999999999999999999988754

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=87.06  E-value=0.46  Score=32.93  Aligned_cols=31  Identities=32%  Similarity=0.666  Sum_probs=25.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|+..+|..||++.++++.|+.+....
T Consensus       275 ~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  305 (327)
T 3lxl_A          275 ELMKLCWAPSPQDRPSFSALGPQLDMLWSGS  305 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            4999999999999999999999999887643

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=86.64  E-value=0.42  Score=33.97  Aligned_cols=29  Identities=31%  Similarity=0.770  Sum_probs=26.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|+..++..||++.+++..|+.+..
T Consensus       336 ~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          336 MMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            48999999999999999999999987654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=86.61  E-value=0.44  Score=32.07  Aligned_cols=30  Identities=33%  Similarity=0.678  Sum_probs=26.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+...
T Consensus       241 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          241 QLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence            489999999999999999999999877653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=86.42  E-value=0.59  Score=32.43  Aligned_cols=33  Identities=18%  Similarity=0.232  Sum_probs=28.2

Q ss_pred             HHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          103 QISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       103 ~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .+.. ++..|++.++..||++.++.+.|+.+..+
T Consensus       250 ~~~~-li~~~l~~~p~~RP~~~~l~~~l~~~~~~  282 (330)
T 2izr_A          250 EMAT-YLRYVRRLDFFEKPDYDYLRKLFTDLFDR  282 (330)
T ss_dssp             HHHH-HHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence            4444 89999999999999999999999877654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=86.37  E-value=0.45  Score=33.10  Aligned_cols=30  Identities=30%  Similarity=0.721  Sum_probs=26.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+...
T Consensus       290 ~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          290 MMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            489999999999999999999999887653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=86.35  E-value=0.39  Score=32.39  Aligned_cols=29  Identities=24%  Similarity=0.691  Sum_probs=25.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|++.++..||++.+++..|..+-+
T Consensus       252 ~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          252 TIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            58899999999999999999999887654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=86.15  E-value=0.46  Score=33.84  Aligned_cols=30  Identities=30%  Similarity=0.721  Sum_probs=26.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.++++.|+.+...
T Consensus       324 ~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          324 MMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            489999999999999999999999887653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=86.13  E-value=0.47  Score=33.59  Aligned_cols=30  Identities=13%  Similarity=0.238  Sum_probs=25.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +++..|+..+|.+||++.|+++.+......
T Consensus       288 ~li~~~L~~dP~~R~sa~el~~~l~~~l~~  317 (336)
T 4g3f_A          288 QAIQEGLRKEPVHRASAMELRRKVGKALQE  317 (336)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence            689999999999999999999887665543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=86.12  E-value=0.57  Score=35.17  Aligned_cols=30  Identities=33%  Similarity=0.711  Sum_probs=26.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..||+.++..||++.+++..|+.+...
T Consensus       495 ~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          495 DLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            489999999999999999999999887653

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=86.10  E-value=0.48  Score=32.14  Aligned_cols=30  Identities=30%  Similarity=0.742  Sum_probs=27.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+-..
T Consensus       259 ~li~~~l~~~p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          259 QVMQQCWEADPAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            589999999999999999999999887654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=86.10  E-value=0.44  Score=33.79  Aligned_cols=31  Identities=26%  Similarity=0.805  Sum_probs=27.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.++..||++.+++..++.+....
T Consensus       317 ~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          317 RIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            4899999999999999999999998887643

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=85.40  E-value=0.54  Score=32.18  Aligned_cols=30  Identities=33%  Similarity=0.791  Sum_probs=26.4

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+-..
T Consensus       282 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          282 QTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            488999999999999999999999876543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=85.36  E-value=0.5  Score=32.33  Aligned_cols=30  Identities=30%  Similarity=0.750  Sum_probs=26.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+-.+
T Consensus       279 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          279 DIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            489999999999999999999999876653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=85.33  E-value=0.7  Score=35.36  Aligned_cols=30  Identities=33%  Similarity=0.720  Sum_probs=26.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..||..++..||++.+++..|+.+...
T Consensus       570 ~li~~cl~~dP~~RPs~~~l~~~L~~~~~~  599 (613)
T 2ozo_A          570 ALMSDCWIYKWEDRPDFLTVEQRMRACYYS  599 (613)
T ss_dssp             HHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            489999999999999999999999876543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=85.15  E-value=0.56  Score=32.85  Aligned_cols=29  Identities=34%  Similarity=0.823  Sum_probs=26.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|++.++..||++.+++..|+.+-.
T Consensus       327 ~li~~~l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          327 QTMLDCWHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            48889999999999999999999987654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=85.11  E-value=0.58  Score=31.60  Aligned_cols=30  Identities=37%  Similarity=0.836  Sum_probs=25.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+...
T Consensus       256 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          256 NVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence            489999999999999999999998876543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=84.90  E-value=0.59  Score=32.55  Aligned_cols=30  Identities=23%  Similarity=0.548  Sum_probs=25.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+...
T Consensus       306 ~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          306 IIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            489999999999999999999999876553

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=84.84  E-value=0.5  Score=32.40  Aligned_cols=30  Identities=40%  Similarity=0.827  Sum_probs=26.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+..+
T Consensus       280 ~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          280 EIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            489999999999999999999999877543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=84.81  E-value=7.4  Score=27.43  Aligned_cols=70  Identities=9%  Similarity=0.074  Sum_probs=36.6

Q ss_pred             ccccCceeeEEEEEEec-----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCc-eeeeeeEEecCCceEE
Q psy697            4 RIGKGHFGTVYNGNWHG-----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN-LVLFMGACMKPPHLAI   71 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~l   71 (157)
                      .++.|....+|+....+           .+.+|+.....    ........|..++..+...+ ..++++..  .  -++
T Consensus        40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~----~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~  111 (369)
T 3c5i_A           40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV----DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGR  111 (369)
T ss_dssp             EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG----GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred             EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc----cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcE
Confidence            45667677889888643           57788764321    11111245666666553222 33555433  2  368


Q ss_pred             EEecCCCCCH
Q psy697           72 VTSKCNGHTL   81 (157)
Q Consensus        72 v~e~~~~g~L   81 (157)
                      ++||++|.++
T Consensus       112 v~e~i~G~~l  121 (369)
T 3c5i_A          112 IEEWLYGDPL  121 (369)
T ss_dssp             EEECCCSEEC
T ss_pred             EEEEecCCcC
Confidence            9999987543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=84.77  E-value=0.53  Score=32.46  Aligned_cols=31  Identities=35%  Similarity=0.768  Sum_probs=27.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.+|..||++.+++..++.+....
T Consensus       270 ~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          270 DLMYQCWSADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            4899999999999999999999999887754

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=84.58  E-value=0.92  Score=33.70  Aligned_cols=30  Identities=23%  Similarity=0.418  Sum_probs=26.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+..+
T Consensus       250 ~li~~cl~~dP~~RPs~~el~~~L~~l~~~  279 (483)
T 3sv0_A          250 SYFHYCRSLRFDDKPDYSYLKRLFRDLFIR  279 (483)
T ss_dssp             HHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence            489999999999999999999998877543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=84.41  E-value=0.6  Score=31.60  Aligned_cols=30  Identities=33%  Similarity=0.720  Sum_probs=26.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.++..||++.+++..|+.+...
T Consensus       244 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  273 (287)
T 1u59_A          244 ALMSDCWIYKWEDRPDFLTVEQRMRACYYS  273 (287)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            488999999999999999999999887654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=84.13  E-value=0.91  Score=31.20  Aligned_cols=31  Identities=26%  Similarity=0.786  Sum_probs=27.4

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.++..||++.+++..|+.+....
T Consensus       271 ~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~  301 (322)
T 1p4o_A          271 ELMRMCWQYNPKMRPSFLEIISSIKEEMEPG  301 (322)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence            4899999999999999999999998876544

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=84.03  E-value=0.64  Score=32.17  Aligned_cols=31  Identities=35%  Similarity=0.901  Sum_probs=27.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|+..++..||++.+++..|+.+..+.
T Consensus       272 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          272 DLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            4889999999999999999999998877643

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=83.99  E-value=0.64  Score=32.16  Aligned_cols=31  Identities=26%  Similarity=0.805  Sum_probs=27.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|++.++..||++.+++..+..+....
T Consensus       276 ~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~  306 (327)
T 2yfx_A          276 RIMTQCWQHQPEDRPNFAIILERIEYCTQDP  306 (327)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence            4899999999999999999999998877643

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=83.92  E-value=4.1  Score=30.06  Aligned_cols=70  Identities=10%  Similarity=-0.016  Sum_probs=41.0

Q ss_pred             ccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCce-eeeeeEEecCCceEEEEecCCCC
Q psy697            4 RIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL-VLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .|+.|-...+|++...+   .+.+|+..... ...-+   ...|..++..+...++ .++++.+. .   .+++||++|.
T Consensus       115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~id---R~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~  186 (458)
T 2qg7_A          115 IINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIIN---REREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGY  186 (458)
T ss_dssp             EECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSC---HHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSE
T ss_pred             EcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcC---HHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCc
Confidence            45667778899998764   48888764321 10000   1467777887754444 46666552 2   3599999875


Q ss_pred             CH
Q psy697           80 TL   81 (157)
Q Consensus        80 ~L   81 (157)
                      ++
T Consensus       187 ~l  188 (458)
T 2qg7_A          187 AL  188 (458)
T ss_dssp             EC
T ss_pred             cC
Confidence            44

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=83.71  E-value=0.59  Score=31.42  Aligned_cols=30  Identities=33%  Similarity=0.512  Sum_probs=25.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|++.+|..||++.+++..+..+...
T Consensus       246 ~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          246 TLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            588999999999999999999998876543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=83.68  E-value=0.66  Score=31.31  Aligned_cols=30  Identities=30%  Similarity=0.898  Sum_probs=26.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      .++..|+..++..||++.++++.|+.+...
T Consensus       243 ~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          243 ELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            489999999999999999999998877654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=83.60  E-value=0.91  Score=34.95  Aligned_cols=29  Identities=28%  Similarity=0.665  Sum_probs=26.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..|++.++..||++.+++..|+.+..
T Consensus       603 ~li~~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          603 DLMNLCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            48999999999999999999999987654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=80.13  E-value=0.88  Score=31.35  Aligned_cols=31  Identities=13%  Similarity=0.355  Sum_probs=27.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..|+..+|..||++.+++..|..+....
T Consensus       280 ~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          280 SLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            5889999999999999999999998887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	157
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-21
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-16
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	9e-16
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	0.003
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-15
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-14
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	0.001
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-14
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.003
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-14
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	0.002
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-14
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-13
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-13
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-13
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.001
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-13
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-12
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	0.002
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-12
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-12
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	0.002
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-12
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-12
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-12
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	8e-12
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	0.003
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-12
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	0.002
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-11
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	0.002
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-11
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-11
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-11
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-11
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.002
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	0.004
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-10
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	0.002
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-10
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-10
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	0.002
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-08
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	8e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-06
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-06
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-06
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	0.002
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	6e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-05

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 1e-21
 Identities = 52/106 (49%), Positives = 70/106 (66%), Gaps = 2/106 (1%)

Query: 1   MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           +G RIG G FGTVY G WHG+VAVK+L+V     ++  +AFK EV   RKTRH N++LFM
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQ-LQAFKNEVGVLRKTRHVNILLFM 70

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G     P LAIVT  C G +LY ++HI + KF + K+  + +Q +Q
Sbjct: 71  GYSTA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 4e-04
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 85  IHIYKEKFALNKMSTVGQQISQ---DVLMKCWSYKPSDRPDFITLMKSLEKLPK 135
           I +    +    +S V     +    ++ +C   K  +RP F  ++ S+E L +
Sbjct: 219 IFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 2e-16
 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
               +G G FG V  G W G  +VA+K++    + +++    F  E        HE LV 
Sbjct: 8   FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQ 63

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             G C K   + I+T       L   +   + +F   ++  + + +
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 109

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 9e-16
 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 1   MGDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           + +++G G FG V  G W         VAVK L  D L   +  + F  EV       H 
Sbjct: 12  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           NL+   G  +  P + +VT      +L   +  ++  F L  +S    Q+
Sbjct: 72  NLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.003
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 86  HIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKL 133
            I KE   L +     Q I  +V+++CW++KP DRP F+ L   L + 
Sbjct: 226 KIDKEGERLPRPEDCPQDI-YNVMVQCWAHKPEDRPTFVALRDFLLEA 272

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.5 bits (167), Expect = 4e-15
 Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 4/106 (3%)

Query: 4   RIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
            IG G FG VY          VA+K +        + W+    EV   +K RH N + + 
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           G  ++     +V   C G         +K+     +++ V     Q
Sbjct: 82  GCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQ 126

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 7e-15
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           +G  +GKG FG VY          +A+KVL    L+        + EV      RH N++
Sbjct: 10  IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 69

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
              G       + ++       T+Y  +     KF   + +T   +++ 
Sbjct: 70  RLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELAN 117

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.6 bits (162), Expect = 1e-14
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 6/108 (5%)

Query: 1   MGDRIGKGHFGTVYNGNW--HGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
               IG G FG V+ G W    +VA+K +    + +E     F  E     K  H  LV 
Sbjct: 9   FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQ 64

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
             G C++   + +V        L   +   +  FA   +  +   + +
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 112

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
             ++  CW  +P DRP F  L++ L ++
Sbjct: 232 YQIMNHCWKERPEDRPAFSRLLRQLAEI 259

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 2e-14
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 11/150 (7%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-T 51
            G  +G G FG V N   +G        +VAVK+L      D    EA   E+    +  
Sbjct: 41  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK--ADSSEREALMSELKMMTQLG 98

Query: 52  RHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMK 111
            HEN+V  +GAC     + ++   C    L   +   +EKF+ +++    Q+  ++    
Sbjct: 99  SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 158

Query: 112 CWSYKPSDRPDFITLMKSLEKLPKKRILAR 141
                         + K +E L  K  + R
Sbjct: 159 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 188

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 66.6 bits (162), Expect = 3e-14
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           + + +G G FG V+             K ++  Y  D+ T    K E++   +  H  L+
Sbjct: 33  ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLHHPKLI 89

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
               A      + ++    +G  L+  I     K +  ++    +Q 
Sbjct: 90  NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQA 136

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 3e-14
 Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 11/118 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-T 51
            G  +G G FG V     +G         VAVK+L           EA   E+       
Sbjct: 27  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLG 84

Query: 52  RHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVL 109
            H N+V  +GAC       ++T  C    L   +   ++ F  +K S    +  +  L
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.003
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
            D++  CW   P  RP F  +++ +EK 
Sbjct: 278 YDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 3e-14
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 1  MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
          +   IGKG FG V  G++ G  VAVK +      ++ T +AF  E +   + RH NLV  
Sbjct: 11 LLQTIGKGEFGDVMLGDYRGNKVAVKCIK-----NDATAQAFLAEASVMTQLRHSNLVQL 65

Query: 60 MGACMKPP-HLAIVTSKCNGHTLYTNIH 86
          +G  ++    L IVT      +L   + 
Sbjct: 66 LGVIVEEKGGLYIVTEYMAKGSLVDYLR 93

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
            +V+  CW    + RP F+ L + LE +
Sbjct: 230 YEVMKNCWHLDAAMRPSFLQLREQLEHI 257

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 4e-14
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 6/107 (5%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           +   +G G FG VY           A KV+D      E+  E + +E+       H N+V
Sbjct: 16  IIGELGDGAFGKVYKAQNKETSVLAAAKVID---TKSEEELEDYMVEIDILASCDHPNIV 72

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             + A     +L I+   C G  +   +   +     +++  V +Q 
Sbjct: 73  KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 119

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 65.1 bits (158), Expect = 9e-14
 Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           + + +G G FG V+           A K +   +  D+   E  + E+ T    RH  LV
Sbjct: 30  IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---ETVRKEIQTMSVLRHPTLV 86

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
               A      + ++    +G  L+  +     K + ++     +Q+
Sbjct: 87  NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV 133

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.3 bits (156), Expect = 1e-13
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
            D +G G F  V           VA+K +    L+ ++   + + E+    K +H N+V
Sbjct: 13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAVLHKIKHPNIV 70

Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNIH 86
                    HL ++    +G  L+  I 
Sbjct: 71 ALDDIYESGGHLYLIMQLVSGGELFDRIV 99

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 63.6 bits (154), Expect = 2e-13
 Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 7/96 (7%)

Query: 1   MGDRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           +G+ +G G    V+   +   H +VAVKVL  D   D   +  F+ E        H  +V
Sbjct: 11  LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 70

Query: 58  LFMGACM----KPPHLAIVTSKCNGHTLYTNIHIYK 89
                        P   IV    +G TL   +H   
Sbjct: 71  AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG 106

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.6 bits (154), Expect = 2e-13
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           +  ++G+G FG V+ G W+G   VA+K L    +  E    AF  E    +K RHE LV 
Sbjct: 21  LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----AFLQEAQVMKKLRHEKLVQ 76

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDV 108
                 + P   +      G  L        +   L ++  +  QI+  +
Sbjct: 77  LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM 126

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 3e-13
 Identities = 18/92 (19%), Positives = 26/92 (28%), Gaps = 3/92 (3%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
            G  +G+G F TV          E A+K+L+  ++  E        E     +  H   V
Sbjct: 12  FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYK 89
                      L    S      L   I    
Sbjct: 72  KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG 103

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 4e-13
 Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
           M   +G+G FG VY G   G         VA+K ++      E+    F  E +  ++  
Sbjct: 24  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER--IEFLNEASVMKEFN 81

Query: 53  HENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNK 96
             ++V  +G   +     ++        L + +   +   A N 
Sbjct: 82  CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 125

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.6 bits (151), Expect = 6e-13
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 11/109 (10%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE-VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           + + IGKG FG V+ G W GE VAVK+               + E+      RHEN++ F
Sbjct: 7   LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWF----REAEIYQTVMLRHENILGF 62

Query: 60  MGACMKP----PHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           + A  K       L +V+      +L+   ++ +    +  M  +    
Sbjct: 63  IAADNKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALST 109

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.001
 Identities = 6/27 (22%), Positives = 14/27 (51%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
            ++ +CW    + R   + + K+L +L
Sbjct: 269 KIMRECWYANGAARLTALRIKKTLSQL 295

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 7e-13
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 8/109 (7%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           + +R+G G FG V+ G ++G  +VAVK L    +  +    AF  E    ++ +H+ LV 
Sbjct: 17  LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD----AFLAEANLMKQLQHQRLVR 72

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQ 106
                 + P   I+T      +L   +      K  +NK+  +  QI++
Sbjct: 73  LYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 1e-12
 Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 8/107 (7%)

Query: 5   IGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           +G G+FG+V  G +       +VA+KVL      ++   E    E     +  +  +V  
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRL 74

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           +G C +   L +V     G  L+  +   +E+  ++ ++ +  Q+S 
Sbjct: 75  IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM 120

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLE 131
             ++  CW YK  DRPDF+T+ + + 
Sbjct: 242 YALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 1e-12
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 3   DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           ++IG+G  GTVY         EVA++ ++   L  +   E    E+   R+ ++ N+V +
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNY 82

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIH 86
           + + +    L +V     G +L   + 
Sbjct: 83  LDSYLVGDELWVVMEYLAGGSLTDVVT 109

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 2e-12
 Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 6/92 (6%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEK---TWEAFKLEVTTFRKTRHE 54
            G+ +G G F  V          + A K +        +   + E  + EV+  ++ +H 
Sbjct: 14  TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIH 86
           N++           + ++     G  L+  + 
Sbjct: 74  NVITLHEVYENKTDVILILELVAGGELFDFLA 105

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.9 bits (147), Expect = 2e-12
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 7/94 (7%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           M  ++G G +G VY G W      VAVK L  D ++ E+    F  E    ++ +H NLV
Sbjct: 21  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLV 76

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEK 91
             +G C + P   I+T       L   +     +
Sbjct: 77  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 110

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (80), Expect = 0.002
 Identities = 9/31 (29%), Positives = 19/31 (61%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKLPKK 136
            +++  CW + PSDRP F  + ++ E + ++
Sbjct: 246 YELMRACWQWNPSDRPSFAEIHQAFETMFQE 276

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.9 bits (147), Expect = 2e-12
 Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 3/91 (3%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          +   +G G FG V+           A+KVL  + +   K  E    E        H  ++
Sbjct: 8  ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 67

Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNIHIY 88
             G       + ++     G  L++ +   
Sbjct: 68 RMWGTFQDAQQIFMIMDYIEGGELFSLLRKS 98

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 3e-12
 Identities = 15/107 (14%), Positives = 36/107 (33%), Gaps = 6/107 (5%)

Query: 3   DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
             +G G+ G V+  +       +A K++ ++             E+    +     +V F
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGF 69

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
            GA      ++I     +G +L   +     +     +  V   + +
Sbjct: 70  YGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIK 115

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 4e-12
 Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 5/108 (4%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENL 56
           +   +GKG FG V+   +       A+K L  D +  +   E   +E         H  L
Sbjct: 6   LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 65

Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
                      +L  V    NG  L  +I     KF L++ +    +I
Sbjct: 66  THMFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEI 112

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 4e-12
 Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 7/95 (7%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          + + +G+G FG V+             K + V   D        K E++     RH N++
Sbjct: 9  IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV----LVKKEISILNIARHRNIL 64

Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKF 92
              +      L ++    +G  ++  I+    + 
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERINTSAFEL 99

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 8e-12
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 5/117 (4%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE----VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL 56
           +G  IG+G FG V+ G +       +AV +        +   E F  E  T R+  H ++
Sbjct: 11  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70

Query: 57  VLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCW 113
           V  +G   +   + I+   C    L + + + K    L  +     Q+S  +     
Sbjct: 71  VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES 126

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.003
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
             ++ KCW+Y PS RP F  L   L  +
Sbjct: 239 YSLMTKCWAYDPSRRPRFTELKAQLSTI 266

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.4 bits (143), Expect = 8e-12
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 8/110 (7%)

Query: 1   MGDRIGKGHFGTVYNGNWHGE------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHE 54
           +   IG G FG V +G+          VA+K L   Y + ++    F  E +   +  H 
Sbjct: 30  IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFDHP 87

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
           N++   G   K   + I+T      +L + +     +F + ++  + + I
Sbjct: 88  NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI 137

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (81), Expect = 0.002
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
             +++ CW    + RP F  ++ +L+K+
Sbjct: 263 HQLMLDCWQKDRNHRPKFGQIVNTLDKM 290

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 1e-11
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 9/116 (7%)

Query: 5   IGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           IG G FG VY G            VA+K L   Y + ++    F  E     +  H N++
Sbjct: 15  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR--VDFLGEAGIMGQFSHHNII 72

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCW 113
              G   K   + I+T       L   +     +F++ ++  + + I+  +     
Sbjct: 73  RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 128

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
             ++M+CW  + + RP F  ++  L+KL
Sbjct: 243 YQLMMQCWQQERARRPKFADIVSILDKL 270

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.7 bits (141), Expect = 1e-11
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 10/105 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
               IG+G FG V+     G         VAVK+L  +   D +    F+ E     +  
Sbjct: 17  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ--ADFQREAALMAEFD 74

Query: 53  HENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
           + N+V  +G C     + ++        L   +         +  
Sbjct: 75  NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLS 119

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.4 bits (83), Expect = 8e-04
 Identities = 9/28 (32%), Positives = 19/28 (67%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
            +++  CWS  P+DRP F ++ + L+++
Sbjct: 272 YNLMRLCWSKLPADRPSFCSIHRILQRM 299

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.6 bits (141), Expect = 1e-11
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 4  RIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           +G G+FGTV  G +        VAVK+L  +  +D    +    E    ++  +  +V 
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE-ANDPALKDELLAEANVMQQLDNPYIVR 72

Query: 59 FMGACMKPPHLAIVTSKCNGHTLYTNIH 86
           +G C     + +V        L   + 
Sbjct: 73 MIGICEAESWM-LVMEMAELGPLNKYLQ 99

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 1e-11
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          +   +G+G +G V           VAVK++D+    D    E  K E+   +   HEN+V
Sbjct: 9  LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHENVV 66

Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNIH 86
           F G   +     +    C+G  L+  I 
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIE 95

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 2e-11
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 8/92 (8%)

Query: 1   MGDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-TRHE 54
             D IG+G+FG V            + A+K +      D+     F  E+    K   H 
Sbjct: 14  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHP 71

Query: 55  NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIH 86
           N++  +GAC    +L +         L   + 
Sbjct: 72  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 103

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 5e-04
 Identities = 11/32 (34%), Positives = 21/32 (65%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR 137
            D++ +CW  KP +RP F  ++ SL ++ ++R
Sbjct: 256 YDLMRQCWREKPYERPSFAQILVSLNRMLEER 287

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 3e-11
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 16/126 (12%)

Query: 1   MGDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK 50
           +G  +G+G FG V      G          +VAVK+L  D  + +        E+   + 
Sbjct: 17  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL--SDLISEMEMMKM 74

Query: 51  -TRHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEK---FALNKMSTVGQQISQ 106
             +H+N++  +GAC +   L ++    +   L   +   +     ++ N      +Q+S 
Sbjct: 75  IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 134

Query: 107 DVLMKC 112
             L+ C
Sbjct: 135 KDLVSC 140

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (80), Expect = 0.002
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 9/75 (12%)

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPS 118
            +      P+         G  +     + KE   ++K S    ++   ++  CW   PS
Sbjct: 229 EIFTLGGSPY--------PGVPVEELFKLLKEGHRMDKPSNCTNEL-YMMMRDCWHAVPS 279

Query: 119 DRPDFITLMKSLEKL 133
            RP F  L++ L+++
Sbjct: 280 QRPTFKQLVEDLDRI 294

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 3e-11
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 6/91 (6%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          +   IG G +G             +  K LD   + + +  +    EV   R+ +H N+V
Sbjct: 8  VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLRELKHPNIV 66

Query: 58 LFMGACMKPP--HLAIVTSKCNGHTLYTNIH 86
           +    +      L IV   C G  L + I 
Sbjct: 67 RYYDRIIDRTNTTLYIVMEYCEGGDLASVIT 97

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.0 bits (137), Expect = 5e-11
 Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 6/92 (6%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEV---TTFRKTRHE 54
          +   IG+G FG VY           A+K LD   +  ++       E    +        
Sbjct: 8  VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 67

Query: 55 NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIH 86
           +V    A   P  L+ +    NG  L+ ++ 
Sbjct: 68 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 99

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 6e-11
 Identities = 23/116 (19%), Positives = 37/116 (31%), Gaps = 4/116 (3%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
               +GKG FG V            A+K+L  + +  +        E    + TRH  L 
Sbjct: 9   YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCW 113
               A      L  V    NG  L+ ++   +  F   +    G +I   +     
Sbjct: 69  ALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHS 123

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 8e-11
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 9/119 (7%)

Query: 2   GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHEN 55
            + IG+GHFG VY+G            AVK L+     D      F  E    +   H N
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPN 89

Query: 56  LVLFMGACMKPP-HLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCW 113
           ++  +G C++      +V        L   I        +  +   G Q+++ +     
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 148

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.004
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
            +V++KCW  K   RP F  L+  +  +
Sbjct: 264 YEVMLKCWHPKAEMRPSFSELVSRISAI 291

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 1e-10
 Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 12/108 (11%)

Query: 1   MGDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR 52
           +G  +G+G FG V   +  G         VAVK+L       E    A   E+       
Sbjct: 17  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH--RALMSELKILIHIG 74

Query: 53  HE-NLVLFMGACMKPP-HLAIVTSKCNGHTLYTNIHIYKEKFALNKMS 98
           H  N+V  +GAC KP   L ++   C    L T +   + +F   K++
Sbjct: 75  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 122

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (79), Expect = 0.002
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 107 DVLMKCWSYKPSDRPDFITLMKSLEKL 133
             ++ CW  +PS RP F  L++ L  L
Sbjct: 268 QTMLDCWHGEPSQRPTFSELVEHLGNL 294

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 2e-10
 Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 7/123 (5%)

Query: 3   DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEK--TWEAFKLEVTTFRKTRHENLV 57
           D +G+G F TVY          VA+K + + +  + K         E+   ++  H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKP 117
             + A     ++++V            I         + +        Q  L     +  
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVI-IKDNSLVLTPSHIKAYMLMTLQ-GLEYLHQHWI 121

Query: 118 SDR 120
             R
Sbjct: 122 LHR 124

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 3e-10
 Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 8/92 (8%)

Query: 2   GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
              IG+G F TVY G       EVA   L    L   +  + FK E    +  +H N+V 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE-RQRFKEEAEMLKGLQHPNIVR 72

Query: 59  FMGACMKP----PHLAIVTSKCNGHTLYTNIH 86
           F  +          + +VT      TL T + 
Sbjct: 73  FYDSWESTVKGKKCIVLVTELMTSGTLKTYLK 104

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 4e-10
 Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 8/112 (7%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE---KTWEAFKLEVTTFRKTR-- 52
           +G  +G G FG+VY+G        VA+K ++ D + D           +EV   +K    
Sbjct: 8   VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67

Query: 53  HENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
              ++  +    +P    ++  +        +    +         +   Q+
Sbjct: 68  FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 119

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 54.1 bits (129), Expect = 5e-10
 Identities = 17/104 (16%), Positives = 40/104 (38%), Gaps = 4/104 (3%)

Query: 3   DRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFM 60
           ++IG+G +G VY    +     A+K + ++  +DE        E++  ++ +H N+V   
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLY 66

Query: 61  GACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
                   L +V    +       + + +         +   Q+
Sbjct: 67  DVIHTKKRLVLVFEHLDQDLKKL-LDVCEGGLESVTAKSFLLQL 109

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.7 bits (128), Expect = 8e-10
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 3/87 (3%)

Query: 3   DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
             +G G FG V            A+K+LD   +   K  E    E    +      LV  
Sbjct: 47  KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIH 86
             +     +L +V     G  +++++ 
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLR 133

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 2e-09
 Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 4/107 (3%)

Query: 3   DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
           ++IG+G +G VY          VA+K + +D  + E        E++  ++  H N+V  
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKL 66

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
           +        L +V    +                L  + +   Q+ Q
Sbjct: 67  LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 2e-09
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
            ++IG+G +GTV+          VA+K + +D  DDE    +   E+   ++ +H+N+V
Sbjct: 6  KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIV 64

Query: 58 LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYK 89
                     L +V   C+            
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG 96

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 3e-09
 Identities = 25/154 (16%), Positives = 50/154 (32%), Gaps = 9/154 (5%)

Query: 3   DRIGKGHFGTVY---NGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
             +G G +G V    +G    +VA+K L   +   E   +    E+   +  RHEN++  
Sbjct: 24  QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGL 82

Query: 60  MGACMKPPHLAIVTSKCNGHTLYTNIH---IYKEKFALNKMSTVGQQISQ--DVLMKCWS 114
           +        L   T                +  EK   +++  +  Q+ +    +     
Sbjct: 83  LDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI 142

Query: 115 YKPSDRPDFITLMKSLEKLPKKRILARSPSHPLN 148
                +P  + + +  E       LAR     + 
Sbjct: 143 IHRDLKPGNLAVNEDCELKILDFGLARQADSEMT 176

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.1 bits (124), Expect = 3e-09
 Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 8/107 (7%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           +G +IG G FG +Y G       EVA+K+  V     +       +E   ++  +    +
Sbjct: 11  LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESKIYKMMQGGVGI 65

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQI 104
             +  C       ++  +  G +L    +    KF+L  +  +  Q+
Sbjct: 66  PTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 112

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.2 bits (80), Expect = 0.002
 Identities = 8/28 (28%), Positives = 12/28 (42%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKL 133
              L  C S +  D+PD+  L +    L
Sbjct: 249 ATYLNFCRSLRFDDKPDYSYLRQLFRNL 276

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 50.5 bits (120), Expect = 8e-09
 Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 11/116 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDD------EKTWEAFKLEVTTFRKT 51
             + +G+G    V          E AVK++DV           ++  EA   EV   RK 
Sbjct: 7   PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66

Query: 52  R-HENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
             H N++             +V        L+  +   K   +  +   + + + +
Sbjct: 67  SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLE 121

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 1e-08
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 10/109 (9%)

Query: 5   IGKGHFGTVYNGNWHGE-------VAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
           +G G FGTVY G W  E       VA+K L        K  +    E        + ++ 
Sbjct: 17  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVC 74

Query: 58  LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
             +G C+      ++T       L   +  +K+      +     QI++
Sbjct: 75  RLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 6e-06
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKLPK--KRILARSPSHPLNLSRSAESVF 157
             +++KCW      RP F  L+    K+ +  +R L       ++L    +S F
Sbjct: 243 YMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNF 296

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 2e-08
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 1   MGDRIGKGHFGTVY-----NGNWHGE-VAVKVLDVDYL-DDEKTWEAFKLEVTTFRKTRH 53
           +   +G G +G V+     +G+  G+  A+KVL    +    KT E  + E       R 
Sbjct: 28  LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 87

Query: 54  E-NLVLFMGACMKPPHLAIVTSKCNGHTLYTNIH 86
              LV    A      L ++    NG  L+T++ 
Sbjct: 88  SPFLVTLHYAFQTETKLHLILDYINGGELFTHLS 121

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 5e-08
 Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 5/71 (7%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
              IG+G +G V +   +     VA+K +     + +   +    E+    + RHEN++
Sbjct: 12 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENII 69

Query: 58 LFMGACMKPPH 68
                  P  
Sbjct: 70 GINDIIRAPTI 80

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 9e-08
 Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 14/125 (11%)

Query: 3   DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
            +IG+G FG V+         +VA+K + ++  + E        E+   +  +HEN+V  
Sbjct: 16  AKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNL 74

Query: 60  MGACMKPP--------HLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMK 111
           +  C             + +V   C         +    KF L+++  V Q +  + L  
Sbjct: 75  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLL-NGLYY 132

Query: 112 CWSYK 116
               K
Sbjct: 133 IHRNK 137

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 3e-07
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 3  DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLF 59
            +G G +G+V           VAVK L   +       +    E+   +  +HEN++  
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA-KRTYRELRLLKHMKHENVIGL 82

Query: 60 MGACMKPPHL 69
          +        L
Sbjct: 83 LDVFTPARSL 92

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 4e-07
 Identities = 13/106 (12%), Positives = 29/106 (27%), Gaps = 10/106 (9%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
               IG G  G V           VA+K L   + +     +    E+   +   H+N++
Sbjct: 21  NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA-KRAYRELVLMKCVNHKNII 79

Query: 58  LFMGACMKPP------HLAIVTSKCNGHTLYTNIHIYKEKFALNKM 97
             +              + +V    + +           +     +
Sbjct: 80  SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL 125

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 8e-07
 Identities = 21/100 (21%), Positives = 29/100 (29%), Gaps = 16/100 (16%)

Query: 5   IGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMG 61
           IG G FG VY          VA+K +        +       E+   RK  H N+V    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVL-------QDKRFKNRELQIMRKLDHCNIVRLRY 80

Query: 62  ACMKP------PHLAIVTSKCNGHTLYTNIHIYKEKFALN 95
                       +L +V             H  + K  L 
Sbjct: 81  FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 18/132 (13%), Positives = 37/132 (28%), Gaps = 14/132 (10%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENL 56
           +  ++G+G +  V+         +V VK+L              K E+      R   N+
Sbjct: 39  LVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK------IKREIKILENLRGGPNI 92

Query: 57  VLFMGACMKPPH--LAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWS 114
           +        P     A+V    N            +      M  + + +  D       
Sbjct: 93  ITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKAL--DYCHSMGI 150

Query: 115 YKPSDRPDFITL 126
                +P  + +
Sbjct: 151 MHRDVKPHNVMI 162

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 3e-06
 Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 17/113 (15%)

Query: 1   MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRK-TRHENL 56
               +G G  G V          + A+K+L        +     + EV    + ++  ++
Sbjct: 16  TSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHI 67

Query: 57  V----LFMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEK-FALNKMSTVGQQI 104
           V    ++         L IV    +G  L++ I    ++ F   + S + + I
Sbjct: 68  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 120

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 4e-06
 Identities = 20/115 (17%), Positives = 35/115 (30%), Gaps = 13/115 (11%)

Query: 1   MGDRIGKGHFGTVYNG----NWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRK---TRH 53
               IG+G +G V+      N    VA+K + V   ++       + EV   R      H
Sbjct: 11  CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAVLRHLETFEH 69

Query: 54  ENLVLFMGACMKPP-----HLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQ 103
            N+V     C          L +V    +         + +       +  +  Q
Sbjct: 70  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 40.2 bits (93), Expect = 3e-05
 Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 8/108 (7%)

Query: 2   GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVL 58
           G RIG+G FG ++ G       +VA+K         +      + E  T++       + 
Sbjct: 10  GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ-----LRDEYRTYKLLAGCTGIP 64

Query: 59  FMGACMKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQ 106
            +    +     ++     G +L   + +   KF++  ++   +Q+  
Sbjct: 65  NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLA 112

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 4/32 (12%), Positives = 10/32 (31%)

Query: 106 QDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR 137
              +    +      PD+  L     K+ ++ 
Sbjct: 249 YKYMHYARNLAFDATPDYDYLQGLFSKVLERL 280

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 39.0 bits (90), Expect = 6e-05
 Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 9/72 (12%)

Query: 2  GDRIGKGHFGTVYNGNWH--GEVAVKVLDVDYLDDEKTW-------EAFKLEVTTFRKTR 52
          G  +G+G    V+N      GE  VK   V +   +K           F +      +  
Sbjct: 5  GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64

Query: 53 HENLVLFMGACM 64
             L    G  +
Sbjct: 65 FRALQKLQGLAV 76

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.2 bits (90), Expect = 8e-05
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 7/68 (10%)

Query: 1  MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLV 57
          +  ++G GHF TV+          VA+K++  D +      EA + E+   ++    +  
Sbjct: 17 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVNDADNT 72

Query: 58 LFMGACMK 65
                  
Sbjct: 73 KEDSMGAN 80

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	157
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.97
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.97
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.97
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.97
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.97
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.96
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.96
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.96
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.96
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.96
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.96
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.95
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.95
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.95
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.95
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.95
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.95
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.95
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.94
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.94
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.94
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.94
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.94
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.94
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.94
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.94
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.93
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.93
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.93
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.93
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.93
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.92
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.92
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.91
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.9
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.89
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.77
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.76
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.76
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.97
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.37
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	96.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	95.24
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	95.17
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	95.08
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	95.04
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	94.47
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	94.23
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	94.14
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	94.1
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	94.0
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	93.92
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	93.88
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	93.75
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	93.71
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	93.69
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	93.68
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	93.61
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	93.27
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	93.23
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	93.16
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	93.03
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	92.49
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	92.32
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	92.08
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	87.85
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	81.72
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	81.58

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-31  Score=184.29  Aligned_cols=129  Identities=43%  Similarity=0.745  Sum_probs=113.8

Q ss_pred             CCCccccCceeeEEEEEEecceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHGEVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGHT   80 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~   80 (157)
                      +++.||+|+||.||+|++++.+|||.++... .+....+.+.+|+.++.+++||||+++++++. .+.++++||||++|+
T Consensus        12 ~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~   89 (276)
T d1uwha_          12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSS   89 (276)
T ss_dssp             CCSEEEECSSCEEEEEESSSEEEEEECCCSS-CCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCEEE
T ss_pred             EEEEEeeCCCcEEEEEEECCEEEEEEEEccc-CCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEecCCCCC
Confidence            4688999999999999988889999997654 44556788999999999999999999999865 456899999999999


Q ss_pred             HhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           81 LYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        81 L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |.+++...+..+++..+..++.|+++                      +|+++|+++|+|||+|+.|+|....
T Consensus        90 L~~~l~~~~~~~~~~~~~~i~~qi~~----------------------gl~yLH~~~ivHrDlKp~NiLl~~~  140 (276)
T d1uwha_          90 LYHHLHIIETKFEMIKLIDIARQTAQ----------------------GMDYLHAKSIIHRDLKSNNIFLHED  140 (276)
T ss_dssp             HHHHHHTSCCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHH----------------------HHHHHhcCCEeccccCHHHEEEcCC
Confidence            99999876657999999999998888                      8888999999999999999998654

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.4e-32  Score=185.78  Aligned_cols=129  Identities=21%  Similarity=0.199  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.++.   .+|+|+++...  .....+.+.+|+.++++++||||+++++++...+.++++||||++
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g   87 (271)
T d1nvra_          10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG   87 (271)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEehhh--cchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCC
Confidence            5789999999999999865   49999997653  233456788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccccC
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAES  155 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~~  155 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|..+.+.
T Consensus        88 g~L~~~l~~~~-~l~e~~~~~i~~qi~~----------------------al~ylH~~~IiHrDiKp~NILl~~~~~  141 (271)
T d1nvra_          88 GELFDRIEPDI-GMPEPDAQRFFHQLMA----------------------GVVYLHGIGITHRDIKPENLLLDERDN  141 (271)
T ss_dssp             EEGGGGSBTTT-BCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEECTTCC
T ss_pred             CcHHHHHhcCC-CCCHHHHHHHHHHHHH----------------------HHHHHHHcCCccCcccHHHEEECCCCC
Confidence            99999998655 7999999999998888                      888899999999999999999876543

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.8e-32  Score=183.79  Aligned_cols=130  Identities=24%  Similarity=0.302  Sum_probs=113.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|+++.   .+|+|++.+....+....+.+.+|+.+++.++||||+++++++...+.++++||||++
T Consensus        11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~   90 (263)
T d2j4za1          11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL   90 (263)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence            5689999999999999865   4999998754322223456788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+.+
T Consensus        91 g~L~~~l~~~~-~l~e~~~~~i~~qi~~----------------------al~~lH~~~ivHrDiKp~Nill~~~~  143 (263)
T d2j4za1          91 GTVYRELQKLS-KFDEQRTATYITELAN----------------------ALSYCHSKRVIHRDIKPENLLLGSAG  143 (263)
T ss_dssp             CBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTTS
T ss_pred             CcHHHHHhhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeeeeeccccceecCCC
Confidence            99999998765 7999999999998888                      88889999999999999999987654

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-31  Score=185.45  Aligned_cols=128  Identities=22%  Similarity=0.316  Sum_probs=113.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .+|+|.++..   .....+.+.+|+.++++++||||+++++++...+.++++||||++
T Consensus        17 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~---~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~   93 (288)
T d2jfla1          17 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   93 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECS---SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eEEEeeCCCcEEEEEEECCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCC
Confidence            4679999999999999865   4999999764   334566788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+..+++.++..++.|++.                      +|+++|+++|+|||+|+.|+|....+
T Consensus        94 g~L~~~~~~~~~~l~e~~~~~i~~qi~~----------------------gL~ylH~~~ivHrDiKp~NIll~~~~  147 (288)
T d2jfla1          94 GAVDAVMLELERPLTESQIQVVCKQTLD----------------------ALNYLHDNKIIHRDLKAGNILFTLDG  147 (288)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCEEEeecChhheeECCCC
Confidence            9999998776557999999999998888                      88889999999999999999987654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.4e-31  Score=181.85  Aligned_cols=126  Identities=21%  Similarity=0.262  Sum_probs=111.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .||+|.+....   ....+.+.+|+.+++.++||||+++++++...+.++++||||++
T Consensus        25 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g  101 (293)
T d1yhwa1          25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (293)
T ss_dssp             CEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGG---CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EEEEecCcCcEEEEEEECCCCCEEEEEEEeccc---ChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCC
Confidence            5789999999999999754   49999997643   22356789999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...  .+++.++..++.|++.                      +|+++|+++|+|||+|+.|+|....+
T Consensus       102 g~L~~~~~~~--~l~~~~~~~i~~qi~~----------------------aL~yLH~~~iiHrDiKp~NILl~~~~  153 (293)
T d1yhwa1         102 GSLTDVVTET--CMDEGQIAAVCRECLQ----------------------ALEFLHSNQVIHRDIKSDNILLGMDG  153 (293)
T ss_dssp             CBHHHHHHHS--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             CcHHHHhhcc--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCcccCCcHHHeEECCCC
Confidence            9999988753  6999999999998887                      88889999999999999999987654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=5.1e-31  Score=183.95  Aligned_cols=130  Identities=22%  Similarity=0.252  Sum_probs=113.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .||+|.++.....+....+.+.+|+.++++++||||+++++++...+.++++||||++
T Consensus        20 l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~   99 (309)
T d1u5ra_          20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG   99 (309)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             eEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCC
Confidence            4679999999999999865   4999999876544555677899999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++..++...+ .+++.++..++.|++.                      +|+++|+++|+|||+|+.|+|..+.+
T Consensus       100 g~l~~~~~~~~-~l~e~~~~~i~~qi~~----------------------aL~yLH~~~iiHrDiKp~NILl~~~~  152 (309)
T d1u5ra_         100 SASDLLEVHKK-PLQEVEIAAVTHGALQ----------------------GLAYLHSHNMIHRDVKAGNILLSEPG  152 (309)
T ss_dssp             EHHHHHHHHTS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             CchHHHHHhCC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEeccCCCcceEEECCCC
Confidence            99977766544 7999999999998888                      88889999999999999999987643

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=9.1e-31  Score=182.00  Aligned_cols=129  Identities=22%  Similarity=0.270  Sum_probs=113.6

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.++.      .+|+|.+...  ......+.+.+|+.++++++||||+++++++...+.++++|||
T Consensus        31 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey  108 (299)
T d1jpaa_          31 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEF  108 (299)
T ss_dssp             EEEEEECSSSEEEEEEECC---CCEEEEEEECCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEe
Confidence            4689999999999999853      2788888664  4456677899999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++|+|.+++....+.+++.++..++.|++.                      +|+++|+++++|||+|+.|+|..+..
T Consensus       109 ~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~----------------------gl~yLH~~~iiHrDlKp~NILl~~~~  165 (299)
T d1jpaa_         109 MENGSLDSFLRQNDGQFTVIQLVGMLRGIAA----------------------GMKYLADMNYVHRDLAARNILVNSNL  165 (299)
T ss_dssp             CTTEEHHHHHHTTTTCSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             cCCCcceeeeccccCCCCHHHHHHHHHHHHH----------------------HHHHHhhCCCccCccccceEEECCCC
Confidence            9999999998876657999999999998888                      88889999999999999999987543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.7e-31  Score=184.42  Aligned_cols=128  Identities=17%  Similarity=0.224  Sum_probs=113.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .+|+|.++..  .+....+.+.+|+.+++.++||||+++++++...+.+++||||+++
T Consensus        11 ~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~g   88 (322)
T d1s9ja_          11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG   88 (322)
T ss_dssp             EEEEECCSSCCEEEEEETTTTEEEEEEEEECC--CCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEChh--hCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            4689999999999999865   4999999865  3345567889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-cccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-RILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++.+.+ .+++..+..++.|++.                      +|+++|++ +|+|||+|+.|+|..+..
T Consensus        89 g~L~~~l~~~~-~l~~~~~~~~~~qil~----------------------aL~yLH~~~~IiHRDiKP~NILl~~~~  142 (322)
T d1s9ja_          89 GSLDQVLKKAG-RIPEQILGKVSIAVIK----------------------GLTYLREKHKIMHRDVKPSNILVNSRG  142 (322)
T ss_dssp             EEHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHHHCCCCSCCSGGGEEECTTC
T ss_pred             CcHHHHHhhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHhCCEEccccCHHHeeECCCC
Confidence            99999998765 7999999999998887                      88889975 899999999999987654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=1.9e-30  Score=183.74  Aligned_cols=126  Identities=17%  Similarity=0.213  Sum_probs=112.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .||+|.+..   ......+.+.+|+.+++.++||||+++++++...+.++++||||++
T Consensus        31 ~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~---~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g  107 (350)
T d1koaa2          31 HEELGTGAFGVVHRVTERATGNNFAAKFVMT---PHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG  107 (350)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEECC---CSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEcc---cchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            4679999999999999864   499999976   3455677889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+++....+.+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+
T Consensus       108 g~L~~~l~~~~~~l~e~~~~~i~~qi~~----------------------aL~ylH~~~iiHrDiKp~NIll~~  159 (350)
T d1koaa2         108 GELFEKVADEHNKMSEDEAVEYMRQVCK----------------------GLCHMHENNYVHLDLKPENIMFTT  159 (350)
T ss_dssp             CBHHHHHTCTTSCBCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEESS
T ss_pred             CCHHHHHHhhcCCCCHHHHHHHHHHHHH----------------------HHHHHHhcCCeeeeechhHeeecc
Confidence            9999999765557999999999998888                      888899999999999999998854

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=1.8e-30  Score=184.02  Aligned_cols=126  Identities=14%  Similarity=0.171  Sum_probs=112.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .+|+|+++..   .......+.+|+.+++.++||||+++++++...+.+|++||||++
T Consensus        34 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g  110 (352)
T d1koba_          34 LEELGSGAFGVVHRCVEKATGRVFVAKFINTP---YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG  110 (352)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEECCc---chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            4789999999999999854   4999999873   345567888999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+.+...+..+++.++..++.|++.                      +|+++|+++|+|||+|+.|+|...
T Consensus       111 g~L~~~~~~~~~~l~e~~~~~i~~qi~~----------------------aL~ylH~~~iiHRDiKp~NILl~~  162 (352)
T d1koba_         111 GELFDRIAAEDYKMSEAEVINYMRQACE----------------------GLKHMHEHSIVHLDIKPENIMCET  162 (352)
T ss_dssp             CBHHHHTTCTTCCBCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEESS
T ss_pred             ChHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHCCeeecccccccccccc
Confidence            9999988776657999999999998888                      888899999999999999999863

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-30  Score=181.43  Aligned_cols=126  Identities=15%  Similarity=0.196  Sum_probs=112.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .+|+|.++..    ......+.+|+.++..++||||+++++++...+.+|++||||++
T Consensus        10 ~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~----~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~g   85 (321)
T d1tkia_          10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISG   85 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEcCC----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCC
Confidence            5789999999999999865   4999999764    23456688999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+++...+..+++.++..++.|++.                      +|+++|+++|+|||+|+.|++....
T Consensus        86 g~L~~~i~~~~~~l~e~~~~~i~~qi~~----------------------al~yLH~~~iiHrDlKp~NIll~~~  138 (321)
T d1tkia_          86 LDIFERINTSAFELNEREIVSYVHQVCE----------------------ALQFLHSHNIGHFDIRPENIIYQTR  138 (321)
T ss_dssp             CBHHHHHTSSSCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEESSS
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHH----------------------HHHHHHHcCCCcccccccceeecCC
Confidence            9999999876657999999999998888                      8888999999999999999998654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.1e-31  Score=183.38  Aligned_cols=130  Identities=21%  Similarity=0.156  Sum_probs=113.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|.+..   .||+|++.+....+....+.+.+|+.++++++||||+++++++...+.+|++||||++
T Consensus        13 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~g   92 (288)
T d1uu3a_          13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN   92 (288)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCC
Confidence            5789999999999999854   4999999753322223456789999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+.+
T Consensus        93 g~L~~~~~~~~-~l~e~~~~~~~~qi~~----------------------al~ylH~~~iiHrDiKp~NIll~~~~  145 (288)
T d1uu3a_          93 GELLKYIRKIG-SFDETCTRFYTAEIVS----------------------ALEYLHGKGIIHRDLKPENILLNEDM  145 (288)
T ss_dssp             EEHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECTTS
T ss_pred             CCHHHhhhccC-CCCHHHHHHHHHHHHH----------------------HHHhhccccEEcCcCCccccccCCCc
Confidence            99999998766 7999999999998887                      88889999999999999999987654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.2e-30  Score=181.93  Aligned_cols=126  Identities=21%  Similarity=0.218  Sum_probs=106.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.++.   .||+|.+.....  ......+.+|+.+++.++||||+++++++...+.+|++||||++
T Consensus        14 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~g   91 (307)
T d1a06a_          14 RDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG   91 (307)
T ss_dssp             EEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEchHHh--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence            5789999999999999864   499999986532  23345678999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |+|.+++...+ .+++.++..++.|++.                      +|+++|+++|+|||+|+.|++..+
T Consensus        92 g~L~~~l~~~~-~l~e~~~~~~~~qi~~----------------------al~ylH~~~iiHrDiKp~Nil~~~  142 (307)
T d1a06a_          92 GELFDRIVEKG-FYTERDASRLIFQVLD----------------------AVKYLHDLGIVHRDLKPENLLYYS  142 (307)
T ss_dssp             CBHHHHHHTCS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEESS
T ss_pred             CcHHHhhhccc-CCCHHHHHHHHHHHHH----------------------HHHhhhhceeeeEEecccceeecc
Confidence            99999998755 7999999999998888                      888899999999999999999865

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-30  Score=178.09  Aligned_cols=127  Identities=19%  Similarity=0.290  Sum_probs=107.6

Q ss_pred             CccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCC
Q psy697            3 DRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   77 (157)
                      +.||+|+||.||+|.+..     .||+|.++... .+....+.+.+|+.++++++||||+++++++.. +..++|||||+
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~   90 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE   90 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh-CCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCC
Confidence            469999999999998753     49999997654 344567789999999999999999999999865 45789999999


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        91 ~g~L~~~l~~~~-~l~~~~~~~i~~qi~~----------------------gl~ylH~~~iiHrDlKp~Nill~~~~  144 (277)
T d1xbba_          91 LGPLNKYLQQNR-HVKDKNIIELVHQVSM----------------------GMKYLEESNFVHRDLAARNVLLVTQH  144 (277)
T ss_dssp             TEEHHHHHHHCT-TCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEEEETT
T ss_pred             CCcHHHHHhhcc-CCCHHHHHHHHHHHHH----------------------HHhhHHhCCcccCCCcchhhcccccC
Confidence            999999998755 7999999999998888                      88889999999999999999987643

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-30  Score=179.23  Aligned_cols=130  Identities=14%  Similarity=0.183  Sum_probs=113.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCC---HHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDD---EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ++.||+|+||.||+|.++.   .+|+|++++.....   ....+.+.+|+.+++.++||||+++++++.+.+.++++|||
T Consensus        15 ~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (293)
T d1jksa_          15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL   94 (293)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            5789999999999999864   49999997654221   12367889999999999999999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        95 ~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~----------------------al~yLH~~~ivHrDiKp~Nill~~~~  150 (293)
T d1jksa_          95 VAGGELFDFLAEKE-SLTEEEATEFLKQILN----------------------GVYYLHSLQIAHFDLKPENIMLLDRN  150 (293)
T ss_dssp             CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEESCSS
T ss_pred             CCCccccchhcccc-ccchhHHHHHHHHHHH----------------------HHHhhhhcceeecccccceEEEecCC
Confidence            99999999998765 7999999999998887                      88889999999999999999986654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.7e-30  Score=179.68  Aligned_cols=127  Identities=28%  Similarity=0.452  Sum_probs=111.7

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .||+|.++...    ...+.+.+|+.+++.++||||+++++++...+.++++||||++
T Consensus        22 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~   97 (287)
T d1opja_          22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY   97 (287)
T ss_dssp             EEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc----chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccC
Confidence            4689999999999999865   49999987643    2356789999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhh-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIY-KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++... ...+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|..+..
T Consensus        98 g~l~~~l~~~~~~~~~~~~~~~i~~qi~~----------------------gL~yLH~~~iiHrDlKp~NILl~~~~  152 (287)
T d1opja_          98 GNLLDYLRECNRQEVSAVVLLYMATQISS----------------------AMEYLEKKNFIHRDLAARNCLVGENH  152 (287)
T ss_dssp             CBHHHHHHHSCTTTSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             cchHHHhhhccccchHHHHHHHHHHHHHH----------------------HHHHHHHCCcccCccccCeEEECCCC
Confidence            9999999764 336899999999998888                      88889999999999999999987654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.2e-30  Score=176.83  Aligned_cols=127  Identities=24%  Similarity=0.275  Sum_probs=109.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec----CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK----PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.+..   .+|+|.+.... .+....+.+.+|+.++++++||||+++++++..    ...++++||
T Consensus        14 ~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE   92 (270)
T d1t4ha_          14 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-LTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE   92 (270)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-SCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred             eeEEecCcCcEEEEEEECCCCeEEEEEEEchhh-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence            3579999999999999865   49999997754 355667789999999999999999999999865    356899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccccc--ccccCCCCccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKR--ILARSPSHPLNLSRS  152 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~--~~~rd~k~~~~~~~~  152 (157)
                      ||++|+|.+++...+ .+++..+..++.|++.                      +|+++|+++  |+|||+|+.|+|..+
T Consensus        93 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~----------------------gl~yLH~~~~~IiHrDiKp~NILl~~  149 (270)
T d1t4ha_          93 LMTSGTLKTYLKRFK-VMKIKVLRSWCRQILK----------------------GLQFLHTRTPPIIHRDLKCDNIFITG  149 (270)
T ss_dssp             CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHTSSSCCCCSCCCGGGEEESS
T ss_pred             CCCCCcHHHHHhccc-cccHHHHHHHHHHHHH----------------------HHHHHHHCCCCEEeCCcChhhceeeC
Confidence            999999999998765 7999999999998888                      777788777  999999999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.8e-30  Score=177.22  Aligned_cols=126  Identities=21%  Similarity=0.337  Sum_probs=109.7

Q ss_pred             ccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            4 RIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         4 ~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +||+|+||.||+|.++.     .||||.++..  .+....+.+.+|+.++++++||||+++++++.. +.+++|||||++
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~   92 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG   92 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChh--cCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCC
Confidence            49999999999998743     3899999765  456677889999999999999999999998865 468999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+..
T Consensus        93 g~L~~~l~~~~~~l~~~~~~~i~~qi~~----------------------gL~ylH~~~iiHrDlKp~Nill~~~~  146 (285)
T d1u59a_          93 GPLHKFLVGKREEIPVSNVAELLHQVSM----------------------GMKYLEEKNFVHRDLAARNVLLVNRH  146 (285)
T ss_dssp             EEHHHHHTTCTTTSCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEEEETT
T ss_pred             CcHHHHhhccccCCCHHHHHHHHHHHHH----------------------HHHHHHhCCeecCcCchhheeeccCC
Confidence            9999998766557999999999998888                      88889999999999999999886543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-30  Score=177.42  Aligned_cols=127  Identities=21%  Similarity=0.324  Sum_probs=112.5

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|.+.+  .||||.++...    ...+.+.+|+.++++++||||+++++++...+.++++|||+++|
T Consensus        10 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g   85 (263)
T d1sm2a_          10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG   85 (263)
T ss_dssp             EEEEECCSSCCEEEEEETTTEEEEEEECCSSS----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             EEEEeeCCCeEEEEEEECCCCEEEEEEECCCc----CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCC
Confidence            4689999999999999865  49999997643    23457899999999999999999999999999999999999999


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++...+..+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+..
T Consensus        86 ~L~~~l~~~~~~~~~~~~~~i~~qia~----------------------gl~~lH~~~iiHrDlKp~Nill~~~~  138 (263)
T d1sm2a_          86 CLSDYLRTQRGLFAAETLLGMCLDVCE----------------------GMAYLEEACVIHRDLAARNCLVGENQ  138 (263)
T ss_dssp             BHHHHHHTTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCTTCSGGGEEECGGG
T ss_pred             cHHHHhhccccCCCHHHHHHHHHHHHH----------------------HHHhhhccceeecccchhheeecCCC
Confidence            999998876657899999999998888                      88889999999999999999987654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=5.3e-30  Score=176.46  Aligned_cols=130  Identities=21%  Similarity=0.190  Sum_probs=114.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC----ceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP----HLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e   74 (157)
                      .+.||+|+||.||+|++..   .+|+|+++.....+......+.+|+.+++.++||||+++++++...+    .+|++||
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE   91 (277)
T d1o6ya_          12 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME   91 (277)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEE
Confidence            5689999999999999854   49999998766566677788999999999999999999999997653    3899999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+++++|.+++...+ .+++.++..++.|++.                      +|+++|+++++|||+|+.|++....+
T Consensus        92 ~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~----------------------al~~lH~~~iiHrDiKP~NIll~~~~  148 (277)
T d1o6ya_          92 YVDGVTLRDIVHTEG-PMTPKRAIEVIADACQ----------------------ALNFSHQNGIIHRDVKPANIMISATN  148 (277)
T ss_dssp             CCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEEETTS
T ss_pred             CCCCCEehhhhcccC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCccCccccCcccccCccc
Confidence            999999999998765 7999999999998888                      88889999999999999999987654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-30  Score=183.27  Aligned_cols=130  Identities=21%  Similarity=0.215  Sum_probs=113.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|..+.   .||+|++++....+....+.+.+|+.+++.++||||+++++++...+.++++||||++
T Consensus        10 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~g   89 (337)
T d1o6la_          10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG   89 (337)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCC
Confidence            5789999999999999855   4999999764322223456788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|..+.+
T Consensus        90 g~L~~~~~~~~-~~~e~~~~~~~~qil~----------------------al~ylH~~~iiHRDlKP~NILl~~~g  142 (337)
T d1o6la_          90 GELFFHLSRER-VFTEERARFYGAEIVS----------------------ALEYLHSRDVVYRDIKLENLMLDKDG  142 (337)
T ss_dssp             CBHHHHHHHHS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             Cchhhhhhccc-CCcHHHHHHHHHHHhh----------------------hhhhhhhcCccccccCHHHeEecCCC
Confidence            99999998866 7999999999997777                      88889999999999999999987654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.4e-30  Score=175.30  Aligned_cols=131  Identities=20%  Similarity=0.233  Sum_probs=104.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--CCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--PPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|.++.   .+|+|.+.... .+....+.+.+|+.+++.++||||+++++++..  .+.+|++||||
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~   87 (269)
T d2java1           9 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC   87 (269)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEECCTT-SCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECC
T ss_pred             eEEEecCCCeEEEEEEECCCCCEEEEEEEChhh-CCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecC
Confidence            5789999999999999864   49999998765 456667889999999999999999999999864  46789999999


Q ss_pred             CCCCHhHHHhhh---cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc-----cccccCCCCccc
Q psy697           77 NGHTLYTNIHIY---KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK-----RILARSPSHPLN  148 (157)
Q Consensus        77 ~~g~L~~~i~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~-----~~~~rd~k~~~~  148 (157)
                      ++|+|.+++...   +..+++..++.++.|++.                      +|+++|++     +|+|||+|+.|+
T Consensus        88 ~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~----------------------al~ylH~~~~~~~~IiHrDiKp~NI  145 (269)
T d2java1          88 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTL----------------------ALKECHRRSDGGHTVLHRDLKPANV  145 (269)
T ss_dssp             TTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHH----------------------HHHHHHHHCC---------CCGGGE
T ss_pred             CCCcHHHHHHhccccCCCCCHHHHHHHHHHHHH----------------------HHHHHHHhcCCCCCEEeCcCchhhc
Confidence            999999998753   346999999999999888                      55555554     499999999999


Q ss_pred             ccccccC
Q psy697          149 LSRSAES  155 (157)
Q Consensus       149 ~~~~~~~  155 (157)
                      |..+.+.
T Consensus       146 ll~~~~~  152 (269)
T d2java1         146 FLDGKQN  152 (269)
T ss_dssp             EECTTSC
T ss_pred             CcCCCCc
Confidence            9876543

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=2e-29  Score=173.39  Aligned_cols=130  Identities=18%  Similarity=0.169  Sum_probs=112.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCC------HHHHHHHHHHHHHHHhcC-CCceeeeeeEEecCCceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDD------EKTWEAFKLEVTTFRKTR-HENLVLFMGACMKPPHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l   71 (157)
                      .+.||+|+||+||+|++..   .+|+|++++.....      ....+.+.+|+.++++++ ||||+++++++.+++.+|+
T Consensus         8 ~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~i   87 (277)
T d1phka_           8 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL   87 (277)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEE
Confidence            5789999999999999855   49999997654221      123456889999999996 9999999999999999999


Q ss_pred             EEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           72 VTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      +||||++|+|.++++.++ .+++.++..++.|++.                      +|+++|+++|+|||+|+.|++..
T Consensus        88 vmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~----------------------al~~lH~~~ivHrDlkp~Nill~  144 (277)
T d1phka_          88 VFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLE----------------------VICALHKLNIVHRDLKPENILLD  144 (277)
T ss_dssp             EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEEC
T ss_pred             EEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHHcCCcccccccceEEEc
Confidence            999999999999998765 8999999999998888                      88889999999999999999987


Q ss_pred             ccc
Q psy697          152 SAE  154 (157)
Q Consensus       152 ~~~  154 (157)
                      ..+
T Consensus       145 ~~~  147 (277)
T d1phka_         145 DDM  147 (277)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.9e-29  Score=171.95  Aligned_cols=127  Identities=24%  Similarity=0.429  Sum_probs=113.3

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      +++.||+|+||.||+|++++  .||||.++...    ...+.+.+|+.+++.++||||+++++++..++.++++|||+++
T Consensus         8 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~----~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~   83 (258)
T d1k2pa_           8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS----MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN   83 (258)
T ss_dssp             CCCCCCEETTEEEEEEEETTTEEEEEEEEESSS----SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTT
T ss_pred             EeEEEecCCCeEEEEEEECCCCEEEEEEECcCc----CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCC
Confidence            46899999999999999865  59999998653    2345789999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      |+|.+++......+++..+..++.|+++                      +|+++|+++|+|||+|+.|++..+.
T Consensus        84 g~l~~~~~~~~~~~~~~~~~~i~~qi~~----------------------gl~~LH~~~iiH~dlk~~Nill~~~  136 (258)
T d1k2pa_          84 GCLLNYLREMRHRFQTQQLLEMCKDVCE----------------------AMEYLESKQFLHRDLAARNCLVNDQ  136 (258)
T ss_dssp             EEHHHHHHSGGGCCCHHHHHHHHHHHHH----------------------HHHHHHHTTBCCSCCSGGGEEECTT
T ss_pred             CcHHHhhhccccCCcHHHHHHHHHHHHH----------------------HHHHHhhcCcccccccceeEEEcCC
Confidence            9999998876667999999999998888                      8888999999999999999998764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=6.3e-30  Score=178.92  Aligned_cols=130  Identities=18%  Similarity=0.175  Sum_probs=112.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|+++.   .||+|+++..........+.+.+|+.+++.++||||+++++++...+.++++||||++
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g   88 (316)
T d1fota_           9 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG   88 (316)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCC
Confidence            5789999999999999864   4999999753222223456788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+++.... .+++..+..++.|++.                      +++++|+++|+|||+|+.|+|..+.+
T Consensus        89 g~l~~~~~~~~-~~~~~~~~~~~~qi~~----------------------al~~lH~~~iiHrDiKp~NILl~~~g  141 (316)
T d1fota_          89 GELFSLLRKSQ-RFPNPVAKFYAAEVCL----------------------ALEYLHSKDIIYRDLKPENILLDKNG  141 (316)
T ss_dssp             CBHHHHHHHTS-SCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECCCCCGGGEEECTTS
T ss_pred             ccccccccccc-cccccHHHHHHHHHHH----------------------hhhhhccCcEEccccCchheeEcCCC
Confidence            99999998765 7899998889887777                      88889999999999999999987654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.1e-29  Score=171.97  Aligned_cols=129  Identities=22%  Similarity=0.268  Sum_probs=114.0

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      .+.||+|+||.||+|.++.       .||||.++..  .+......+.+|+.++++++||||+++++++...+..+++||
T Consensus        12 ~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e   89 (283)
T d1mqba_          12 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG--YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITE   89 (283)
T ss_dssp             EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc--cChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEE
Confidence            4679999999999998754       3899999765  345566789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+.++++.+.+......+++.++..++.|++.                      +++++|+++|+|||+|+.|+|..+..
T Consensus        90 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~----------------------gl~~lH~~~iiHrDlKp~NILl~~~~  147 (283)
T d1mqba_          90 YMENGALDKFLREKDGEFSVLQLVGMLRGIAA----------------------GMKYLANMNYVHRDLAARNILVNSNL  147 (283)
T ss_dssp             CCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred             ecccCcchhhhhcccccccHHHHHHHHHHHHH----------------------hhhhccccccccCccccceEEECCCC
Confidence            99999999988876557999999999998888                      88889999999999999999987653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.9e-29  Score=176.28  Aligned_cols=129  Identities=25%  Similarity=0.376  Sum_probs=107.0

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   72 (157)
                      ++.||+|+||.||+|++..        .+|+|.+...  .+......+.+|+.++.++ +||||+++++++...+.++++
T Consensus        42 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv  119 (325)
T d1rjba_          42 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK--ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI  119 (325)
T ss_dssp             EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccc--cCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEE
Confidence            4689999999999999854        3899988754  2344566788999999998 899999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhc----------------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q psy697           73 TSKCNGHTLYTNIHIYK----------------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSL  130 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~----------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l  130 (157)
                      ||||++|+|.++++..+                      ..+++..+..++.|++.                      +|
T Consensus       120 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------gl  177 (325)
T d1rjba_         120 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK----------------------GM  177 (325)
T ss_dssp             EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHH----------------------HH
T ss_pred             EEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHH----------------------HH
Confidence            99999999999997643                      24788888888888777                      88


Q ss_pred             hccccccccccCCCCccccccccc
Q psy697          131 EKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       131 ~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+++|+|||+|+.|++..+..
T Consensus       178 ~yLH~~~IiHRDlKp~Nill~~~~  201 (325)
T d1rjba_         178 EFLEFKSCVHRDLAARNVLVTHGK  201 (325)
T ss_dssp             HHHHHTTEEETTCSGGGEEEETTT
T ss_pred             HHHHhCCeeeccCchhccccccCC
Confidence            889999999999999999986543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.5e-29  Score=171.91  Aligned_cols=126  Identities=23%  Similarity=0.359  Sum_probs=107.9

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||.||+|.+++  .||||.++...    ...+.+.+|+.++++++||||+++++++. .+.++++|||+++|
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g   92 (272)
T d1qpca_          18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS----MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENG   92 (272)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTC
T ss_pred             eEEEecCCCcEEEEEEECCCCEEEEEEEccCc----CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCCC
Confidence            4679999999999999865  49999997643    23467899999999999999999999775 45679999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++.... ..+++..+..++.|++.                      +|.++|+++|+|||+|+.|++..+..
T Consensus        93 ~L~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------gl~~lH~~~ivHrDiKp~NIll~~~~  146 (272)
T d1qpca_          93 SLVDFLKTPSGIKLTINKLLDMAAQIAE----------------------GMAFIEERNYIHRDLRAANILVSDTL  146 (272)
T ss_dssp             BHHHHTTSHHHHTCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEECTTS
T ss_pred             cHHHHHhhcCCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCcccCccchhheeeeccc
Confidence            9999876543 25899999999998888                      88888999999999999999987653

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.5e-29  Score=170.59  Aligned_cols=130  Identities=26%  Similarity=0.446  Sum_probs=103.6

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|++..      .||+|.+......+....+.+.+|+.++++++||||+++++++.. +..+++|||
T Consensus        13 ~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~   91 (273)
T d1u46a_          13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTEL   91 (273)
T ss_dssp             EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             EEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeee
Confidence            4679999999999998754      489999987654445567789999999999999999999999965 467899999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|++.+.+......+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+..
T Consensus        92 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~----------------------gl~ylH~~~iiHrDikp~NIll~~~~  148 (273)
T d1u46a_          92 APLGSLLDRLRKHQGHFLLGTLSRYAVQVAE----------------------GMGYLESKRFIHRDLAARNLLLATRD  148 (273)
T ss_dssp             CTTCBHHHHHHHHGGGSCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEEEETT
T ss_pred             ecCcchhhhhhcccCCCCHHHHHHHHHHHHH----------------------HHHHhhhCCEeeeeecHHHhcccccc
Confidence            9999999998877667999999999998888                      88889999999999999999876643

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-28  Score=169.05  Aligned_cols=128  Identities=26%  Similarity=0.352  Sum_probs=110.7

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      ++.||+|+||.||+|.+..      .+|+|.++..  ......+.+.+|+.++++++||||+++++++. .+.++++|||
T Consensus        12 ~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~   88 (273)
T d1mp8a_          12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMEL   88 (273)
T ss_dssp             EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred             EEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEe
Confidence            5789999999999998753      2788888654  44566788999999999999999999999885 5678999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+|.+++......+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        89 ~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~----------------------gl~ylH~~~iiHrDlKp~NIll~~~~  145 (273)
T d1mp8a_          89 CTLGELRSFLQVRKYSLDLASLILYAYQLST----------------------ALAYLESKRFVHRDIAARNVLVSSND  145 (273)
T ss_dssp             CTTEEHHHHHHHTTTTSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEEEETT
T ss_pred             ccCCcHHhhhhccCCCCCHHHHHHHHHHHHH----------------------HhhhhcccCeeccccchhheeecCCC
Confidence            9999999998776667999999999998888                      88889999999999999999887654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.8e-29  Score=175.20  Aligned_cols=131  Identities=23%  Similarity=0.253  Sum_probs=109.5

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHH-hcCCCceeeeeeEEecCCceEEEEecC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFR-KTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +++.||+|+||+||+|.+..   .||+|++++.........+.+..|..++. .++||||+++++++...+.+|+||||+
T Consensus         6 i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~   85 (320)
T d1xjda_           6 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL   85 (320)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeec
Confidence            35789999999999999865   49999997532111223445666776665 679999999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++|+|.+++...+ .+++.++..++.|++.                      +|+++|+++++|||+|+.|+|..+.+
T Consensus        86 ~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~----------------------al~ylH~~~iiHrDikp~NiL~~~~~  140 (320)
T d1xjda_          86 NGGDLMYHIQSCH-KFDLSRATFYAAEIIL----------------------GLQFLHSKGIVYRDLKLDNILLDKDG  140 (320)
T ss_dssp             TTCBHHHHHHHHS-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCCCCCGGGEEECTTS
T ss_pred             CCCcHHHHhhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCeeeccCcccceeecCCC
Confidence            9999999998765 7999999999998887                      88889999999999999999987654

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.4e-29  Score=172.28  Aligned_cols=130  Identities=19%  Similarity=0.173  Sum_probs=105.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      .+.||+|+||.||+|.+..   .||+|+++... ......+.+.+|+.++++++||||+++++++.+.+.++++|||+.+
T Consensus         7 ~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~   85 (298)
T d1gz8a_           7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ   85 (298)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             ccEEecCcCeEEEEEEECCCCCEEEEEEEehhh-cChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC
Confidence            5789999999999999854   49999997653 3333467788999999999999999999999999999999999976


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +.+..........+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus        86 ~~~~~~~~~~~~~l~e~~~~~~~~qil~----------------------~L~yLH~~~IiHrDiKpeNIl~~~~~  139 (298)
T d1gz8a_          86 DLKKFMDASALTGIPLPLIKSYLFQLLQ----------------------GLAFCHSHRVLHRDLKPQNLLINTEG  139 (298)
T ss_dssp             EHHHHHHHTTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             chhhhhhhhcccCCCHHHHHHHHHHHHH----------------------HHHHhhcCCEEccccCchheeecccC
Confidence            4444333333446999999999998888                      88889999999999999999986544

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=5.1e-29  Score=176.46  Aligned_cols=130  Identities=18%  Similarity=0.168  Sum_probs=112.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||.||+|+++.   .+|+|++.+....+....+.+.+|+.+++.++||||+++++++.....++++|||+.+
T Consensus        46 ~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~  125 (350)
T d1rdqe_          46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG  125 (350)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             EEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccc
Confidence            4689999999999999864   4999999753222223456788999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |+|.+.+...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|....+
T Consensus       126 g~l~~~l~~~~-~l~e~~~~~i~~qi~~----------------------aL~yLH~~~iiHRDIKP~NILl~~~g  178 (350)
T d1rdqe_         126 GEMFSHLRRIG-RFSEPHARFYAAQIVL----------------------TFEYLHSLDLIYRDLKPENLLIDQQG  178 (350)
T ss_dssp             CBHHHHHHHHC-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTS
T ss_pred             cchhhhHhhcC-CCCHHHHHHHHHHHHH----------------------HHHHHHhCCEecCcCCHHHcccCCCC
Confidence            99999998766 7999999999998887                      88889999999999999999986654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=9.6e-29  Score=175.84  Aligned_cols=130  Identities=19%  Similarity=0.183  Sum_probs=107.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHH---HHHHHHHhcCCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFK---LEVTTFRKTRHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~---~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+..   .||+|++.+...........+.   .++.+++.++||||+++++++...+.+++||||
T Consensus         9 ~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~   88 (364)
T d1omwa3           9 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL   88 (364)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEe
Confidence            5789999999999999865   4999998753211111122333   346667778899999999999999999999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++|+|.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|+|..+.+
T Consensus        89 ~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~----------------------aL~ylH~~~iiHrDlKP~NILl~~~g  144 (364)
T d1omwa3          89 MNGGDLHYHLSQHG-VFSEADMRFYAAEIIL----------------------GLEHMHNRFVVYRDLKPANILLDEHG  144 (364)
T ss_dssp             CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECSSS
T ss_pred             cCCCcHHHHHHhcc-cccHHHHHHHHHHHHH----------------------HHHHHHHCCccceeeccceeEEcCCC
Confidence            99999999998765 7899999999998777                      88889999999999999999987654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.8e-28  Score=169.46  Aligned_cols=128  Identities=18%  Similarity=0.299  Sum_probs=107.9

Q ss_pred             CCccccCceeeEEEEEEec-----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG-----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~   75 (157)
                      .+.||+|+||.||+|.+++     .+|+|.++..  .+....+.+.+|+.++.++ +||||+++++++...+.++++|||
T Consensus        15 ~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey   92 (309)
T d1fvra_          15 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY   92 (309)
T ss_dssp             EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             EEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc--cChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEe
Confidence            5789999999999999865     3778887654  3344567899999999998 799999999999999999999999


Q ss_pred             CCCCCHhHHHhhh---------------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccc
Q psy697           76 CNGHTLYTNIHIY---------------KEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILA  140 (157)
Q Consensus        76 ~~~g~L~~~i~~~---------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~  140 (157)
                      +++|+|.++++..               ...+++..+..++.|++.                      ++.++|+++++|
T Consensus        93 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~----------------------gl~~lH~~~iiH  150 (309)
T d1fvra_          93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR----------------------GMDYLSQKQFIH  150 (309)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHH----------------------HHHHHHHTTEEC
T ss_pred             cCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHH----------------------HHHhhhcCCccc
Confidence            9999999999753               236899999999998888                      888899999999


Q ss_pred             cCCCCcccccccc
Q psy697          141 RSPSHPLNLSRSA  153 (157)
Q Consensus       141 rd~k~~~~~~~~~  153 (157)
                      ||+|+.|+|....
T Consensus       151 rDlkp~NIL~~~~  163 (309)
T d1fvra_         151 RDLAARNILVGEN  163 (309)
T ss_dssp             SCCSGGGEEECGG
T ss_pred             cccccceEEEcCC
Confidence            9999999997654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-27  Score=167.10  Aligned_cols=129  Identities=22%  Similarity=0.319  Sum_probs=111.6

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e   74 (157)
                      .++||+|+||+||+|.+..      .||||.++..  .+....+.+.+|+.++++++||||+++++++.. .+..+++||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCC--CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            3579999999999999844      3899999754  456677889999999999999999999999875 568999999


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ||++|+|.+++......+++..+..++.|++.                      +|.++|+++++|||+|+.|+|..+..
T Consensus       110 ~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~----------------------gL~~lH~~~iiHrDLK~~NILl~~~~  167 (311)
T d1r0pa_         110 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK----------------------GMKFLASKKFVHRDLAARNCMLDEKF  167 (311)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECTTC
T ss_pred             EeecCchhhhhccccccchHHHHHHHHHHHHH----------------------hhhhhcccCcccCCccHHhEeECCCC
Confidence            99999999999876656788888899998888                      78888999999999999999987653

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.8e-28  Score=167.10  Aligned_cols=126  Identities=25%  Similarity=0.351  Sum_probs=108.5

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      ++.||+|+||.||+|.+++  .||+|.++...    ...+.+.+|+.++++++||||+++++++. .+..+++|||+++|
T Consensus        22 ~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~----~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g   96 (285)
T d1fmka3          22 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT----MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKG   96 (285)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEECCTTS----SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTC
T ss_pred             eeEEeeCCCeEEEEEEECCCCEEEEEEECccc----CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCC
Confidence            5679999999999999866  49999997643    23467899999999999999999999884 55689999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|..++.... ..+++.++..++.|++.                      +|+++|.++++|||+|+.|++..+..
T Consensus        97 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~----------------------gl~~LH~~~ivH~DlKp~NIll~~~~  150 (285)
T d1fmka3          97 SLLDFLKGETGKYLRLPQLVDMAAQIAS----------------------GMAYVERMNYVHRDLRAANILVGENL  150 (285)
T ss_dssp             BHHHHHSHHHHTTCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             chhhhhhhcccccchHHHHHHHHHHHHH----------------------HHHHHhhhheecccccceEEEECCCC
Confidence            9999887643 36999999999998888                      88888999999999999999987653

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.3e-27  Score=166.86  Aligned_cols=129  Identities=23%  Similarity=0.321  Sum_probs=111.3

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv   72 (157)
                      ++.||+|+||.||+|++.+        .+|||.++..  ........+.+|+.++.++ +||||+++++++...+.++++
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lv  105 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS--AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI  105 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcc--cCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEE
Confidence            5789999999999998743        3999999875  3456677899999999999 799999999999999999999


Q ss_pred             EecCCCCCHhHHHhhhc-----------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697           73 TSKCNGHTLYTNIHIYK-----------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~-----------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      ||||++|+|.++++...                 ..+++..+..++.|++.                      +++++|+
T Consensus       106 mE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------gl~~LH~  163 (311)
T d1t46a_         106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAK----------------------GMAFLAS  163 (311)
T ss_dssp             EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHH----------------------HHHHHHH
T ss_pred             EEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHH----------------------HHHHHHh
Confidence            99999999999997542                 14788888899888777                      8888999


Q ss_pred             ccccccCCCCccccccccc
Q psy697          136 KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       136 ~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++++|||+|+.|++.....
T Consensus       164 ~~ivHrDLKp~NIl~~~~~  182 (311)
T d1t46a_         164 KNCIHRDLAARNILLTHGR  182 (311)
T ss_dssp             TTCCCSCCSGGGEEEETTT
T ss_pred             CCeeecccccccccccccC
Confidence            9999999999999986543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-28  Score=170.98  Aligned_cols=130  Identities=18%  Similarity=0.147  Sum_probs=105.2

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCC--HHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDD--EKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      ++.||+|+||+||+|.+..   .||+|+++......  ....+.+.+|+.+++.++||||+++++++...+.++++|||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            4689999999999999855   49999997643211  112346889999999999999999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .++++..+.... ..+++..+..++.|++.                      +|+++|+++++|||+|+.|++..+.+
T Consensus        83 ~~~~~~~~~~~~-~~l~~~~~~~~~~qil~----------------------aL~~lH~~~iiHrDiKp~NIli~~~~  137 (299)
T d1ua2a_          83 ETDLEVIIKDNS-LVLTPSHIKAYMLMTLQ----------------------GLEYLHQHWILHRDLKPNNLLLDENG  137 (299)
T ss_dssp             SEEHHHHHTTCC-SSCCSSHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred             cchHHhhhhhcc-cCCCHHHHHHHHHHHHH----------------------HHHHhhccceecccCCcceEEecCCC
Confidence            887776666543 37999999999998777                      88889999999999999999987654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-27  Score=165.07  Aligned_cols=129  Identities=23%  Similarity=0.403  Sum_probs=106.1

Q ss_pred             CCccccCceeeEEEEEEec----------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG----------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~   70 (157)
                      ++.||+|+||.||+|++..          .||+|.+...  ........+.+|...+..+ +||||+++++++...+.++
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~   95 (299)
T d1fgka_          18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY   95 (299)
T ss_dssp             EEECC-----CEEEEEEECC----CCCEEEEEEECCCTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             eeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcc--cChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEE
Confidence            5789999999999998743          3899999775  3455567788899888888 8999999999999999999


Q ss_pred             EEEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697           71 IVTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      ++|||+++|+|.+++...+               ..+++..+..++.|++.                      +++++|+
T Consensus        96 ~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------al~ylH~  153 (299)
T d1fgka_          96 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR----------------------GMEYLAS  153 (299)
T ss_dssp             EEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHH----------------------HHHHHHH
T ss_pred             EEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHH----------------------HHHHhhh
Confidence            9999999999999997543               24899999999998888                      8888999


Q ss_pred             ccccccCCCCccccccccc
Q psy697          136 KRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       136 ~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++++|||+|+.|+|.....
T Consensus       154 ~~ivHrDiKp~NiLl~~~~  172 (299)
T d1fgka_         154 KKCIHRDLAARNVLVTEDN  172 (299)
T ss_dssp             TTCCCSCCSGGGEEECTTC
T ss_pred             CCEEeeeecccceeecCCC
Confidence            9999999999999876543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.4e-28  Score=165.48  Aligned_cols=126  Identities=26%  Similarity=0.357  Sum_probs=106.8

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec-CCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK-PPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~~~g   79 (157)
                      ++.||+|+||.||+|.+++ .+|+|.++..     ...+.+.+|+.++++++||||+++++++.. .+.++++|||+++|
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~-----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g   86 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG   86 (262)
T ss_dssp             EEEEEECSSCEEEEEEETTEEEEEEECCCC-----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTE
T ss_pred             eEEEecCCCeEEEEEEECCeEEEEEEECcH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCC
Confidence            5679999999999999976 5999999653     234678899999999999999999998865 46689999999999


Q ss_pred             CHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +|.+++...+ ..+++..+..++.||+.                      +++++|+++++|||+|+.|++.....
T Consensus        87 ~L~~~l~~~~~~~l~~~~~~~i~~~i~~----------------------al~ylH~~~ivH~dlkp~Nil~~~~~  140 (262)
T d1byga_          87 SLVDYLRSRGRSVLGGDCLLKFSLDVCE----------------------AMEYLEGNNFVHRDLAARNVLVSEDN  140 (262)
T ss_dssp             EHHHHHHHHHHHHCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCSGGGEEECTTS
T ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHh----------------------hccccccCceeccccchHhheecCCC
Confidence            9999997643 25899999999998888                      77888888999999999999887643

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.3e-27  Score=165.98  Aligned_cols=128  Identities=20%  Similarity=0.317  Sum_probs=108.0

Q ss_pred             CCccccCceeeEEEEEEec-------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG-------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   74 (157)
                      ++.||+|+||.||+|.+..       ++|+|.+...  .+....+.+.+|+.++++++||||+++++++... ..++++|
T Consensus        14 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e   90 (317)
T d1xkka_          14 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQ   90 (317)
T ss_dssp             EEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEE
T ss_pred             eeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEE
Confidence            4689999999999998753       3888888654  3334567899999999999999999999998765 5678899


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++.+|+|.+.+......+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+..
T Consensus        91 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~----------------------gl~yLH~~~iiHrDlKp~NIll~~~~  148 (317)
T d1xkka_          91 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK----------------------GMNYLEDRRLVHRDLAARNVLVKTPQ  148 (317)
T ss_dssp             CCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEEEETT
T ss_pred             eccCCcccccccccccCCCHHHHHHHHHHHHH----------------------HHHHHHHcCcccCcchhhcceeCCCC
Confidence            99999999998877668999999999998888                      88888999999999999999986543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=5.2e-28  Score=167.06  Aligned_cols=129  Identities=16%  Similarity=0.180  Sum_probs=110.8

Q ss_pred             CCccccCceeeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNGH   79 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g   79 (157)
                      .+.||+|+||+||+|+++.  .||+|.+.... .+....+.+.+|+.+++.++||||+++++++...+..++++|++.++
T Consensus         7 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~   85 (286)
T d1ob3a_           7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD   85 (286)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEEEEECCSS-GGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEE
T ss_pred             ccEEecCCCcEEEEEEeCCCCEEEEEEEehhh-cChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhh
Confidence            5789999999999999865  49999997654 23334677899999999999999999999999999999999999887


Q ss_pred             CHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           80 TLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        80 ~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      .+..+.+..+ .+++..+..++.|++.                      +|+++|+.+|+|||+|+.|++..+.+
T Consensus        86 ~~~~~~~~~~-~l~~~~~~~i~~qi~~----------------------~L~~LH~~~IvHrDiKp~NIll~~~~  137 (286)
T d1ob3a_          86 LKKLLDVCEG-GLESVTAKSFLLQLLN----------------------GIAYCHDRRVLHRDLKPQNLLINREG  137 (286)
T ss_dssp             HHHHHHTSTT-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECTTS
T ss_pred             hHHHHHhhcC-CcchhhhHHHHHHHHH----------------------HHHHhccCcEEecCCCCceeeEcCCC
Confidence            7666665544 7999999999998887                      88889999999999999999987654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=4.7e-27  Score=163.35  Aligned_cols=129  Identities=18%  Similarity=0.281  Sum_probs=111.3

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      .+.||+|+||.||+|++++        .||||.++..  ......+.+.+|+.+++.++|||++++++++...+..+++|
T Consensus        18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~   95 (301)
T d1lufa_          18 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF   95 (301)
T ss_dssp             EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh--cChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEE
Confidence            5679999999999999863        4999999765  44556778999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc-----------------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHH
Q psy697           74 SKCNGHTLYTNIHIYK-----------------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSL  130 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~-----------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l  130 (157)
                      ||+++|+|.+++....                       ..+++..+..++.|++.                      +|
T Consensus        96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~----------------------gl  153 (301)
T d1lufa_          96 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAA----------------------GM  153 (301)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHH----------------------HH
T ss_pred             EecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHH----------------------Hh
Confidence            9999999999997532                       13778888888887777                      88


Q ss_pred             hccccccccccCCCCccccccccc
Q psy697          131 EKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       131 ~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++|+++++|||+|+.|+|..+..
T Consensus       154 ~ylH~~~ivHrDlKp~NILld~~~  177 (301)
T d1lufa_         154 AYLSERKFVHRDLATRNCLVGENM  177 (301)
T ss_dssp             HHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             hhcccCCeEeeEEcccceEECCCC
Confidence            889999999999999999987643

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.8e-27  Score=165.58  Aligned_cols=132  Identities=26%  Similarity=0.343  Sum_probs=109.2

Q ss_pred             CCccccCceeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC----ceEEEEecC
Q psy697            2 GDRIGKGHFGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP----HLAIVTSKC   76 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~~   76 (157)
                      .+.||+|+||.||+|++.+ .||+|.++..    .........|+..+..++||||+++++++...+    .++++|||+
T Consensus         8 ~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~----~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~   83 (303)
T d1vjya_           8 QESIGKGRFGEVWRGKWRGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH   83 (303)
T ss_dssp             EEEEECCSSSEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             EEEEeeCCCeEEEEEEECCEEEEEEEECcc----chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecc
Confidence            4689999999999999877 5999998653    122222344555666789999999999998653    589999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ++|+|.+++++.  .+++.++..++.|++. ++.++|+.             .+.++++++|+|||+|+.|+|....
T Consensus        84 ~~g~L~~~l~~~--~l~~~~~~~~~~~ia~-gl~~lH~~-------------~~~~~~~~~IvHrDlKp~NILl~~~  144 (303)
T d1vjya_          84 EHGSLFDYLNRY--TVTVEGMIKLALSTAS-GLAHLHME-------------IVGTQGKPAIAHRDLKSKNILVKKN  144 (303)
T ss_dssp             TTCBHHHHHHHC--CBCHHHHHHHHHHHHH-HHHHHHCC-------------BCSTTCBCEEECSCCCGGGEEECTT
T ss_pred             cCCCHHHHHhcC--CCCHHHHHHHHHHHHH-HHHHHHHh-------------hhhhccCCCeeccccCccceEEcCC
Confidence            999999999864  6899999999999999 88888887             4566888999999999999998654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-27  Score=168.77  Aligned_cols=122  Identities=20%  Similarity=0.190  Sum_probs=102.8

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEec----CCceEEEEe
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMK----PPHLAIVTS   74 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~----~~~~~lv~e   74 (157)
                      +.||+|+||.||+|.+..   .||+|+++..        ..+.+|+.++.++ +||||+++++++.+    ...+|++||
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmE   89 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME   89 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEE
Confidence            469999999999999854   4999998642        2356788886655 89999999999865    366899999


Q ss_pred             cCCCCCHhHHHhhhc-ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           75 KCNGHTLYTNIHIYK-EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||++|+|.+++...+ ..+++.++..++.|++.                      +|+++|+++|+|||+|+.|++..+.
T Consensus        90 y~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~----------------------al~ylH~~~iiHRDiKp~NIll~~~  147 (335)
T d2ozaa1          90 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGE----------------------AIQYLHSINIAHRDVKPENLLYTSK  147 (335)
T ss_dssp             CCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEESCS
T ss_pred             CCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHH----------------------HHHHHHHcCCccccccccccccccc
Confidence            999999999998653 36999999999998888                      8888899999999999999998764


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       148 ~  148 (335)
T d2ozaa1         148 R  148 (335)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.1e-27  Score=162.80  Aligned_cols=129  Identities=19%  Similarity=0.214  Sum_probs=113.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEEecCCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVTSKCNG   78 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   78 (157)
                      ++.||+|+||+||+|++..   .||+|+++... ........+.+|+.+++.++||||+++++++......+++++++.+
T Consensus         7 i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~   85 (292)
T d1unla_           7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ   85 (292)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-SSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSE
T ss_pred             eeEEecCcCeEEEEEEECCCCcEEEEEEEehhh-CChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccc
Confidence            5789999999999999865   39999997654 4445678889999999999999999999999999999999999999


Q ss_pred             CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           79 HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        79 g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      +++..++...+ .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....+
T Consensus        86 ~~l~~~~~~~~-~~~~~~~~~~~~q~~~----------------------aL~~lH~~~IvHrDiKP~NIli~~~~  138 (292)
T d1unla_          86 DLKKYFDSCNG-DLDPEIVKSFLFQLLK----------------------GLGFCHSRNVLHRDLKPQNLLINRNG  138 (292)
T ss_dssp             EHHHHHHHTTT-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEECTTC
T ss_pred             ccccccccccc-ccchhHHHHHHHHHHH----------------------HHHHhhcCCEeeecccCcccccccCC
Confidence            99988887655 7899999999998777                      88889999999999999999886543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-26  Score=161.46  Aligned_cols=128  Identities=17%  Similarity=0.296  Sum_probs=110.4

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~   73 (157)
                      ++.||+|+||.||+|.+..        .||||.++..  ........+.+|+.++++++||||+++++.+...+..+++|
T Consensus        25 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~--~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~  102 (308)
T d1p4oa_          25 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA--ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM  102 (308)
T ss_dssp             EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT--SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc--cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEE
Confidence            4679999999999998752        4999999764  34555677899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhc---------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCC
Q psy697           74 SKCNGHTLYTNIHIYK---------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPS  144 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k  144 (157)
                      ||+++|+|.+++...+         ..+++..+..++.|+++                      +|.++|+++|+|||+|
T Consensus       103 e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~----------------------gl~~LH~~~ivHrDlk  160 (308)
T d1p4oa_         103 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD----------------------GMAYLNANKFVHRDLA  160 (308)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCBCSCCS
T ss_pred             eecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHH----------------------HHHHHhhCCeeeceEc
Confidence            9999999999987542         13688889999998888                      8888999999999999


Q ss_pred             Ccccccccc
Q psy697          145 HPLNLSRSA  153 (157)
Q Consensus       145 ~~~~~~~~~  153 (157)
                      +.|+|..+.
T Consensus       161 ~~NiLld~~  169 (308)
T d1p4oa_         161 ARNCMVAED  169 (308)
T ss_dssp             GGGEEECTT
T ss_pred             CCceeecCC
Confidence            999998654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.9e-26  Score=159.16  Aligned_cols=129  Identities=25%  Similarity=0.403  Sum_probs=105.1

Q ss_pred             CCccccCceeeEEEEEEec--------ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecC-CceEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG--------EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKP-PHLAI   71 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~--------~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-~~~~l   71 (157)
                      ++.||+|+||.||+|.+..        .||+|.+...  ......+.+..|...+.++ .|+|++.+++++... ..+++
T Consensus        18 ~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~i   95 (299)
T d1ywna1          18 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV   95 (299)
T ss_dssp             EEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEE
T ss_pred             eeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccc--cCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEE
Confidence            5789999999999999753        3899998764  3455567788888888877 789999999988765 56899


Q ss_pred             EEecCCCCCHhHHHhhhc---------------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697           72 VTSKCNGHTLYTNIHIYK---------------EKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus        72 v~e~~~~g~L~~~i~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +||||++|+|.+++...+               ..+++.++..++.|++.                      +|+++|++
T Consensus        96 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~----------------------gl~ylH~~  153 (299)
T d1ywna1          96 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK----------------------GMEFLASR  153 (299)
T ss_dssp             EEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHH----------------------HHHHHHHT
T ss_pred             EEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHH----------------------HHHHHHhC
Confidence            999999999999997643               24788999999998888                      88889999


Q ss_pred             cccccCCCCccccccccc
Q psy697          137 RILARSPSHPLNLSRSAE  154 (157)
Q Consensus       137 ~~~~rd~k~~~~~~~~~~  154 (157)
                      +|+|||+|+.|+|..+..
T Consensus       154 ~ivHrDlKp~NILl~~~~  171 (299)
T d1ywna1         154 KCIHRDLAARNILLSEKN  171 (299)
T ss_dssp             TCCCSCCCGGGEEECGGG
T ss_pred             CCcCCcCCccceeECCCC
Confidence            999999999999987654

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-26  Score=163.47  Aligned_cols=127  Identities=17%  Similarity=0.181  Sum_probs=102.6

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC------ceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP------HLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~lv   72 (157)
                      ++.||+|+||.||+|.+..   .||+|+++... .+....+.+.+|+.+++.++|||++++++++...+      .++++
T Consensus        23 i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv  101 (346)
T d1cm8a_          23 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV  101 (346)
T ss_dssp             EEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-cChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEE
Confidence            4679999999999999864   49999998654 45666788999999999999999999999997654      57999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      |||+ +++|..+++. + .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|...
T Consensus       102 ~e~~-~~~l~~~~~~-~-~l~~~~~~~~~~qi~~----------------------aL~~LH~~~IiHrDiKp~NIL~~~  156 (346)
T d1cm8a_         102 MPFM-GTDLGKLMKH-E-KLGEDRIQFLVYQMLK----------------------GLRYIHAAGIIHRDLKPGNLAVNE  156 (346)
T ss_dssp             EECC-SEEHHHHHHH-C-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECT
T ss_pred             Eecc-cccHHHHHHh-c-cccHHHHHHHHHHHHH----------------------HHHHHHhCCCcccccCcchhhccc
Confidence            9999 5678777754 3 7999999999998877                      888899999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       157 ~~  158 (346)
T d1cm8a_         157 DC  158 (346)
T ss_dssp             TC
T ss_pred             cc
Confidence            54

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.1e-26  Score=161.91  Aligned_cols=127  Identities=18%  Similarity=0.204  Sum_probs=103.4

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecCC----ceEEEEe
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKPP----HLAIVTS   74 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e   74 (157)
                      ++.||+|+||+||+|....   .+|||.++..  ......+.+.+|+.++..++|||++++++.+....    ..+++++
T Consensus        13 ~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~--~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~   90 (345)
T d1pmea_          13 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVT   90 (345)
T ss_dssp             EEECC---CCCEEEEEETTTCSEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEE
T ss_pred             EEEEeeccCeEEEEEEECCCCcEEEEEEEehh--cChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEE
Confidence            4789999999999999854   4999999764  34566778899999999999999999999987643    2345556


Q ss_pred             cCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           75 KCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        75 ~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ++.+|+|.+++...  .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|....+
T Consensus        91 ~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~----------------------al~yLH~~~iiHRDIKp~NILl~~~~  146 (345)
T d1pmea_          91 HLMGADLYKLLKTQ--HLSNDHICYFLYQILR----------------------GLKYIHSANVLHRDLKPSNLLLNTTC  146 (345)
T ss_dssp             ECCCEEHHHHHHHC--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred             eecCCchhhhhhcC--CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCcCCCCCcceEEECCCC
Confidence            67799999999754  6999999999998887                      88889999999999999999986543

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-26  Score=162.73  Aligned_cols=128  Identities=16%  Similarity=0.154  Sum_probs=108.3

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC-----CceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP-----PHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~~~lv~   73 (157)
                      .+.||+|+||+||+|.+..   .||+|+++... .+....+.+.+|+.+++.++|||++++++++...     ...++++
T Consensus        23 ~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~  101 (348)
T d2gfsa1          23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV  101 (348)
T ss_dssp             EEECGGGTTSSEEEEEETTTTEEEEEEECSCTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEECchh-cChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEE
Confidence            4689999999999999854   49999998754 4556677889999999999999999999998643     3346677


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      +++.+|+|.+++...  .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++....
T Consensus       102 ~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~----------------------aL~~LH~~giiHrDiKp~NILi~~~  157 (348)
T d2gfsa1         102 THLMGADLNNIVKCQ--KLTDDHVQFLIYQILR----------------------GLKYIHSADIIHRDLKPSNLAVNED  157 (348)
T ss_dssp             EECCSEEHHHHHTTC--CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             EeecCCchhhhcccc--cccHHHHHHHHHHHHH----------------------HHHHHHhCCCcccccCCcccccccc
Confidence            888899999999753  6999999999998777                      8888999999999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       158 ~  158 (348)
T d2gfsa1         158 C  158 (348)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.3e-27  Score=161.02  Aligned_cols=130  Identities=18%  Similarity=0.249  Sum_probs=107.6

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCH---HHHHHHHHHHHHHHhcC--CCceeeeeeEEecCCceEEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDE---KTWEAFKLEVTTFRKTR--HENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~---~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv   72 (157)
                      +++.||+|+||.||+|.+..   .+|+|.+......+.   .....+.+|+.+++.++  ||||+++++++..++..+++
T Consensus         8 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv   87 (273)
T d1xwsa_           8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI   87 (273)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred             EeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEE
Confidence            35789999999999999864   499999976432221   11234568999999986  89999999999999999999


Q ss_pred             EecCCC-CCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccc
Q psy697           73 TSKCNG-HTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSR  151 (157)
Q Consensus        73 ~e~~~~-g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~  151 (157)
                      |||+.+ +++.+++...+ .+++..+..++.|++.                      +|+++|+++++|||+|+.|++..
T Consensus        88 ~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~----------------------al~~lH~~~iiHrDiKp~NIll~  144 (273)
T d1xwsa_          88 LERPEPVQDLFDFITERG-ALQEELARSFFWQVLE----------------------AVRHCHNCGVLHRDIKDENILID  144 (273)
T ss_dssp             EECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCSGGGEEEE
T ss_pred             EEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHH----------------------HHHHHHHCCCccccCcccceEEe
Confidence            999976 57888887655 7999999999998888                      88888999999999999999986


Q ss_pred             cc
Q psy697          152 SA  153 (157)
Q Consensus       152 ~~  153 (157)
                      ..
T Consensus       145 ~~  146 (273)
T d1xwsa_         145 LN  146 (273)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.93  E-value=4.5e-26  Score=160.01  Aligned_cols=121  Identities=16%  Similarity=0.194  Sum_probs=103.0

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-CCceeeeeeEEecC--CceEEEEec
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-HENLVLFMGACMKP--PHLAIVTSK   75 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~--~~~~lv~e~   75 (157)
                      ++.||+|+||+||+|++..   .||+|+++..      ..+.+.+|+.++..++ ||||+++++++...  ..++++|||
T Consensus        40 ~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~  113 (328)
T d3bqca1          40 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  113 (328)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEEC
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEee
Confidence            4689999999999999864   4999999753      2356788999999995 99999999998754  568999999


Q ss_pred             CCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccccc
Q psy697           76 CNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus        76 ~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~~  154 (157)
                      |++++|..+.+    .+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|..+.+
T Consensus       114 ~~~~~L~~~~~----~l~e~~i~~i~~qil~----------------------aL~~LH~~gIvHrDiKp~NILi~~~~  166 (328)
T d3bqca1         114 VNNTDFKQLYQ----TLTDYDIRFYMYEILK----------------------ALDYCHSMGIMHRDVKPHNVMIDHEH  166 (328)
T ss_dssp             CCSCBGGGTTT----SCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             cCCCcHHHHhc----CCCHHHHHHHHHHHHH----------------------HHHHHhhcccccccccccceEEcCCC
Confidence            99999877643    6899999999987777                      88889999999999999999987544

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.3e-26  Score=160.22  Aligned_cols=126  Identities=17%  Similarity=0.186  Sum_probs=103.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec------CCceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK------PPHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~~~~lv   72 (157)
                      ++.||+|+||+||+|.+..   .+|||++.... .+......+.+|+.+++.++||||+++++++..      ...++++
T Consensus        22 ~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv  100 (355)
T d2b1pa1          22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV  100 (355)
T ss_dssp             EEECSCC--CEEEEEEETTTTEEEEEEEEESTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred             EEEeecCcCeEEEEEEECCCCCEEEEEEEChhh-cCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEE
Confidence            4689999999999999864   49999998765 456667788999999999999999999999864      3678999


Q ss_pred             EecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           73 TSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ||||.++ +.+.+.  + .+++..+..++.|++.                      +|+++|+++|+|||+|+.|++..+
T Consensus       101 ~Ey~~~~-l~~~~~--~-~~~~~~i~~~~~qil~----------------------gl~~LH~~giiHrDlKP~Nil~~~  154 (355)
T d2b1pa1         101 MELMDAN-LCQVIQ--M-ELDHERMSYLLYQMLC----------------------GIKHLHSAGIIHRDLKPSNIVVKS  154 (355)
T ss_dssp             EECCSEE-HHHHHT--S-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             EeccchH-HHHhhh--c-CCCHHHHHHHHHHHHH----------------------HHHHhhhcccccccCCcccccccc
Confidence            9999664 444443  2 6899999999987777                      888899999999999999999876


Q ss_pred             cc
Q psy697          153 AE  154 (157)
Q Consensus       153 ~~  154 (157)
                      ..
T Consensus       155 ~~  156 (355)
T d2b1pa1         155 DC  156 (355)
T ss_dssp             TC
T ss_pred             cc
Confidence            54

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-25  Score=157.05  Aligned_cols=129  Identities=22%  Similarity=0.287  Sum_probs=102.5

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEec--------CCceE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMK--------PPHLA   70 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------~~~~~   70 (157)
                      .+.||+|+||+||+|.+..   .||||++.... ........+.+|+.+++.++|||++++++.+..        .+.++
T Consensus        15 ~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~   93 (318)
T d3blha1          15 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY   93 (318)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEC-----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEE
T ss_pred             EEEEecCcCeEEEEEEECCCCCEEEEEEEehhh-cchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEE
Confidence            5789999999999999864   49999987654 233445668899999999999999999998865        34689


Q ss_pred             EEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           71 IVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        71 lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ++|||++++.+...... ...+++..+..++.|++.                      +++++|+++|+|||+|+.|++.
T Consensus        94 iv~e~~~~~~~~~~~~~-~~~~~~~~~~~i~~qil~----------------------~l~~lH~~~ivHrDlKp~NILl  150 (318)
T d3blha1          94 LVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLN----------------------GLYYIHRNKILHRDMKAANVLI  150 (318)
T ss_dssp             EEEECCCEEHHHHHTCT-TCCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECCCCCGGGEEE
T ss_pred             EEEeccCCCccchhhhc-ccccccHHHHHHHHHHHH----------------------HHHHhccCCEEecCcCchheee
Confidence            99999987766554443 347899999999887777                      8888999999999999999998


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      .+.+
T Consensus       151 ~~~~  154 (318)
T d3blha1         151 TRDG  154 (318)
T ss_dssp             CTTS
T ss_pred             cCCC
Confidence            7654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.8e-26  Score=157.30  Aligned_cols=130  Identities=20%  Similarity=0.223  Sum_probs=100.7

Q ss_pred             CCccccCceeeEEEEEEec----ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc---CCCceeeeeeEEec-----CCce
Q psy697            2 GDRIGKGHFGTVYNGNWHG----EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT---RHENLVLFMGACMK-----PPHL   69 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~----~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-----~~~~   69 (157)
                      ++.||+|+||.||+|.+..    .||+|++.... ........+.+|+.+++.+   +||||+++++++..     ...+
T Consensus        12 ~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~   90 (305)
T d1blxa_          12 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-GEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL   90 (305)
T ss_dssp             EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEB-CTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred             EEEEecccCeEEEEEEEECCCCEEEEEEEEehhh-ccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceE
Confidence            5689999999999999843    28999997643 2222233455666666554   89999999998854     2468


Q ss_pred             EEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccc
Q psy697           70 AIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNL  149 (157)
Q Consensus        70 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~  149 (157)
                      +++|||++++++..........+++..+..++.|++.                      +|+++|+++|+|||+|+.|+|
T Consensus        91 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~----------------------aL~yLH~~~ivHrDiKp~NIL  148 (305)
T d1blxa_          91 TLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR----------------------GLDFLHSHRVVHRDLKPQNIL  148 (305)
T ss_dssp             EEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEE
T ss_pred             EEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHH----------------------HHHHHHhCCEEecCCCccEEE
Confidence            9999999887766555544446899999999998777                      888899999999999999999


Q ss_pred             ccccc
Q psy697          150 SRSAE  154 (157)
Q Consensus       150 ~~~~~  154 (157)
                      ..+.+
T Consensus       149 i~~~~  153 (305)
T d1blxa_         149 VTSSG  153 (305)
T ss_dssp             ECTTC
T ss_pred             EcCCC
Confidence            87654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5e-25  Score=155.93  Aligned_cols=124  Identities=22%  Similarity=0.155  Sum_probs=99.1

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCceeeeeeEEecC------CceEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENLVLFMGACMKP------PHLAIV   72 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~lv   72 (157)
                      +++||+|+||+||+|++..   .||+|.+.....       ...+|+.+++.++|||++++++++...      ..++++
T Consensus        25 ~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   97 (350)
T d1q5ka_          25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV   97 (350)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEE
T ss_pred             eeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEE
Confidence            4679999999999999865   499999976431       123689999999999999999998653      347899


Q ss_pred             EecCCCCCHhHHHhh--hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccc
Q psy697           73 TSKCNGHTLYTNIHI--YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLS  150 (157)
Q Consensus        73 ~e~~~~g~L~~~i~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~  150 (157)
                      ||||+++.+..+...  ....+++.++..++.|++.                      +|+++|+++|+|||+|+.|+|.
T Consensus        98 ~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~----------------------aL~yLH~~~IiHrDiKp~NILl  155 (350)
T d1q5ka_          98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR----------------------SLAYIHSFGICHRDIKPQNLLL  155 (350)
T ss_dssp             EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECCCCCGGGEEE
T ss_pred             EeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHH----------------------HHHHHHhcCCcccCCCcceEEE
Confidence            999986544433322  2336999999999998888                      8888999999999999999998


Q ss_pred             cccc
Q psy697          151 RSAE  154 (157)
Q Consensus       151 ~~~~  154 (157)
                      .+.+
T Consensus       156 ~~~~  159 (350)
T d1q5ka_         156 DPDT  159 (350)
T ss_dssp             CTTT
T ss_pred             ecCC
Confidence            7653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1e-25  Score=157.87  Aligned_cols=130  Identities=24%  Similarity=0.243  Sum_probs=109.2

Q ss_pred             CCccccCceeeEEEEEEec------ceEEEEeccCCC-CCHHHHHHHHHHHHHHHhcCC-CceeeeeeEEecCCceEEEE
Q psy697            2 GDRIGKGHFGTVYNGNWHG------EVAVKVLDVDYL-DDEKTWEAFKLEVTTFRKTRH-ENLVLFMGACMKPPHLAIVT   73 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~------~~avk~~~~~~~-~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~   73 (157)
                      ++.||+|+||.||+|....      .||+|.+++... .+....+.+.+|+.++++++| |||+++++++.....++++|
T Consensus        29 ~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~  108 (322)
T d1vzoa_          29 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL  108 (322)
T ss_dssp             EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred             EEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeee
Confidence            4689999999999998732      399999865321 112234567889999999966 89999999999999999999


Q ss_pred             ecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCcccccccc
Q psy697           74 SKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus        74 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ||+.+|+|.+++...+ .+++..+..++.|++.                      +++++|+++++|||+|+.|++....
T Consensus       109 e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~----------------------al~~lH~~~ivHrDiKp~Nill~~~  165 (322)
T d1vzoa_         109 DYINGGELFTHLSQRE-RFTEHEVQIYVGEIVL----------------------ALEHLHKLGIIYRDIKLENILLDSN  165 (322)
T ss_dssp             CCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHH----------------------HHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             ecccccHHHHHHHhcc-cccHHHHHHHHHHHHH----------------------HHHHhhcCCEEeccCCccceeecCC
Confidence            9999999999998766 6889999999887777                      7888899999999999999998765


Q ss_pred             c
Q psy697          154 E  154 (157)
Q Consensus       154 ~  154 (157)
                      +
T Consensus       166 ~  166 (322)
T d1vzoa_         166 G  166 (322)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.90  E-value=8.6e-24  Score=146.24  Aligned_cols=124  Identities=19%  Similarity=0.259  Sum_probs=105.0

Q ss_pred             CCCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC-CceeeeeeEEecCCceEEEEecC
Q psy697            1 MGDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH-ENLVLFMGACMKPPHLAIVTSKC   76 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~   76 (157)
                      +++.||+|+||.||+|++..   .+|+|+++... .    ...+..|+..+..++| +|++.+++++......+++|||+
T Consensus         9 i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-D----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-T----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-C----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            35789999999999999864   49999987643 1    2245678888888865 89999999999999999999999


Q ss_pred             CCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           77 NGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        77 ~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                       +++|.+++...+..+++..+..++.|++.                      +|+++|+++|+|||+|+.|++...
T Consensus        84 -~~~l~~~~~~~~~~~~~~~~~~i~~q~~~----------------------~l~~lH~~giiHrDiKp~Nili~~  136 (293)
T d1csna_          84 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLA----------------------RVQSIHEKSLVYRDIKPDNFLIGR  136 (293)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHTTTEECCCCCGGGEEECC
T ss_pred             -CCCHHHHHHhhccchhhHHHHHHHHHHHH----------------------HHHHHHHCCceeccCCccceeecC
Confidence             68999999876657999999999997777                      888899999999999999999854

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=3.1e-23  Score=143.76  Aligned_cols=123  Identities=20%  Similarity=0.236  Sum_probs=98.8

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCCCce-eeeeeEEecCCceEEEEecCC
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRHENL-VLFMGACMKPPHLAIVTSKCN   77 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~   77 (157)
                      ++.||+|+||.||+|.+..   .||||++.....     ...+..|+.+++.++|+|+ +.+..++...+..+++|||+ 
T Consensus        12 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-   85 (299)
T d1ckia_          12 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-   85 (299)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             eEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-
Confidence            5789999999999999854   599999876431     2346789999999977665 55556666778889999999 


Q ss_pred             CCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCCCCccccccc
Q psy697           78 GHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSPSHPLNLSRS  152 (157)
Q Consensus        78 ~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~k~~~~~~~~  152 (157)
                      ++++.+.+...+..+++..+..++.|++.                      +|+++|+++|+|||+|+.|++...
T Consensus        86 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~----------------------~l~~lH~~~iiHrDiKp~NIl~~~  138 (299)
T d1ckia_          86 GPSLEDLFNFCSRKFSLKTVLLLADQMIS----------------------RIEYIHSKNFIHRDVKPDNFLMGL  138 (299)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHH----------------------HHHHHHHTTEECSCCCGGGEEECC
T ss_pred             CCchhhhhhhccCCCcHHHHHHHHHHHHH----------------------HHHHHHHCCeeeccCCHhhccccc
Confidence            55777776665557999999999997777                      888899999999999999997543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.77  E-value=6.1e-19  Score=114.57  Aligned_cols=119  Identities=17%  Similarity=0.159  Sum_probs=85.9

Q ss_pred             CCCccccCceeeEEEEEEec--ceEEEEeccCCCC---------------CHHHHHHHHHHHHHHHhcCCCceeeeeeEE
Q psy697            1 MGDRIGKGHFGTVYNGNWHG--EVAVKVLDVDYLD---------------DEKTWEAFKLEVTTFRKTRHENLVLFMGAC   63 (157)
Q Consensus         1 ~~~~lg~G~~g~v~~~~~~~--~~avk~~~~~~~~---------------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~   63 (157)
                      +++.||+|+||.||+|....  .+|+|++......               ..........|...+..+.|++++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            36789999999999998754  5999987542210               011233455678889999999998877553


Q ss_pred             ecCCceEEEEecCCCCCHhHHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccccccccCC
Q psy697           64 MKPPHLAIVTSKCNGHTLYTNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKKRILARSP  143 (157)
Q Consensus        64 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~~~~rd~  143 (157)
                          ..+++|||+++..+.        .++......++.|++.                      +++++|+++++|||+
T Consensus        84 ----~~~lvme~~~~~~~~--------~l~~~~~~~i~~ql~~----------------------~l~~lH~~giiHrDi  129 (191)
T d1zara2          84 ----GNAVLMELIDAKELY--------RVRVENPDEVLDMILE----------------------EVAKFYHRGIVHGDL  129 (191)
T ss_dssp             ----TTEEEEECCCCEEGG--------GCCCSCHHHHHHHHHH----------------------HHHHHHHTTEECSCC
T ss_pred             ----CCEEEEEeecccccc--------chhhHHHHHHHHHHHH----------------------HHHHHhhCCEEEccC
Confidence                236999999875432        2444555566666665                      888899999999999


Q ss_pred             CCcccccccc
Q psy697          144 SHPLNLSRSA  153 (157)
Q Consensus       144 k~~~~~~~~~  153 (157)
                      ||.|++....
T Consensus       130 KP~NILv~~~  139 (191)
T d1zara2         130 SQYNVLVSEE  139 (191)
T ss_dssp             STTSEEEETT
T ss_pred             ChhheeeeCC
Confidence            9999998653

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=6.4e-19  Score=124.62  Aligned_cols=126  Identities=17%  Similarity=0.155  Sum_probs=93.9

Q ss_pred             CCccccCceeeEEEEEEec---ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcC-----------CCceeeeeeEEec--
Q psy697            2 GDRIGKGHFGTVYNGNWHG---EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTR-----------HENLVLFMGACMK--   65 (157)
Q Consensus         2 ~~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~--   65 (157)
                      ++.||+|+||+||+|+...   .||||+++..    ....+.+.+|+.+++.++           |+|++++++++..  
T Consensus        18 ~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~----~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~   93 (362)
T d1q8ya_          18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   93 (362)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEecc----ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence            5789999999999999854   4999999753    344567778888887764           5789999988764  


Q ss_pred             CCceEEEEecCCCCCHhHH-Hhh-hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHhcccc-ccccccC
Q psy697           66 PPHLAIVTSKCNGHTLYTN-IHI-YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPK-KRILARS  142 (157)
Q Consensus        66 ~~~~~lv~e~~~~g~L~~~-i~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~-~~~~~rd  142 (157)
                      ....+++++++..+..... ... ....+++..+..++.|++.                      +++++|+ .+|+|||
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~----------------------al~~lh~~~~IvHrD  151 (362)
T d1q8ya_          94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL----------------------GLDYMHRRCGIIHTD  151 (362)
T ss_dssp             TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHH----------------------HHHHHHHTTCEECSC
T ss_pred             ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHH----------------------HHHHHhhhcCccccc
Confidence            3556667766655433222 222 2236888889889887777                      7888886 7899999


Q ss_pred             CCCcccccccc
Q psy697          143 PSHPLNLSRSA  153 (157)
Q Consensus       143 ~k~~~~~~~~~  153 (157)
                      +|+.|++....
T Consensus       152 lKp~NIll~~~  162 (362)
T d1q8ya_         152 IKPENVLMEIV  162 (362)
T ss_dssp             CSGGGEEEEEE
T ss_pred             CChhHeeeecc
Confidence            99999998654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.76  E-value=0.00014  Score=47.74  Aligned_cols=135  Identities=12%  Similarity=-0.015  Sum_probs=79.6

Q ss_pred             eeeEEEEEEec-ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc-CCCceeeeeeEEecCCceEEEEecCCCCCHhHHHhh
Q psy697           10 FGTVYNGNWHG-EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT-RHENLVLFMGACMKPPHLAIVTSKCNGHTLYTNIHI   87 (157)
Q Consensus        10 ~g~v~~~~~~~-~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~   87 (157)
                      .+.||+....+ .+.+|.......   .....+..|...+..+ .+-.+.+++.+....+..+++|++.+|.++.+....
T Consensus        27 ~~~v~rv~~~~~~~vlk~~~~~~~---~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~  103 (263)
T d1j7la_          27 PAKVYKLVGENENLYLKMTDSRYK---GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED  103 (263)
T ss_dssp             SSEEEEEECSSCEEEEEEECGGGT---TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTT
T ss_pred             CCcEEEEEeCCCeEEEEEcCCCcc---cchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccccc
Confidence            46789887655 488888765321   1122345666666655 343456677777778889999999999887654432


Q ss_pred             hcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCC-----------------------------------CHHHHHHHHhc
Q psy697           88 YKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRP-----------------------------------DFITLMKSLEK  132 (157)
Q Consensus        88 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp-----------------------------------~~~~i~~~l~~  132 (157)
                      .   ..   ...+..+++. .+..+|+..+.+-|                                   ...++...+..
T Consensus       104 ~---~~---~~~~~~~l~~-~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  176 (263)
T d1j7la_         104 E---QS---PEKIIELYAE-CIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKT  176 (263)
T ss_dssp             C---SC---HHHHHHHHHH-HHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHH
T ss_pred             c---cc---HHHHHHHHHH-HHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHh
Confidence            1   12   2224444555 55556655443322                                   12233333222


Q ss_pred             cc---cccccccCCCCccccccccc
Q psy697          133 LP---KKRILARSPSHPLNLSRSAE  154 (157)
Q Consensus       133 ~~---~~~~~~rd~k~~~~~~~~~~  154 (157)
                      ..   ...++|.|+.+.|++....+
T Consensus       177 ~~~~~~~~l~HgD~~~~Nil~~~~~  201 (263)
T d1j7la_         177 EKPEEELVFSHGDLGDSNIFVKDGK  201 (263)
T ss_dssp             SCCCCCEEEECSCCCTTSEEEETTE
T ss_pred             cCCcCCcEEEEeeccCcceeecCCc
Confidence            21   23478999999999987643

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.97  E-value=0.0013  Score=42.58  Aligned_cols=66  Identities=12%  Similarity=0.070  Sum_probs=43.9

Q ss_pred             eeEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhc--CCCceeeeeeEEecCCceEEEEecCCCCCHh
Q psy697           11 GTVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKT--RHENLVLFMGACMKPPHLAIVTSKCNGHTLY   82 (157)
Q Consensus        11 g~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~   82 (157)
                      +.||+....+  .+.+|..+....      ..+..|...+..+  ..-.+.+++.+....+..+++|++++|.++.
T Consensus        25 ~~v~r~~~~~~~~~vlK~~~~~~~------~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          25 AAVFRLSAQGRPVLFVKTDLSGAL------NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             CEEEEEECTTSCCEEEEEECSCTT------SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CeEEEEEeCCCCEEEEEeCCccCH------hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            5689887754  378888765431      1245566666555  2334567777777788899999999876553

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.37  E-value=0.036  Score=38.30  Aligned_cols=77  Identities=12%  Similarity=0.113  Sum_probs=44.2

Q ss_pred             CccccCceeeEEEEEEec---ceEEEEeccCCC--CC--HHHHHHHHHHHHHHHhc-CC--CceeeeeeEEecCCceEEE
Q psy697            3 DRIGKGHFGTVYNGNWHG---EVAVKVLDVDYL--DD--EKTWEAFKLEVTTFRKT-RH--ENLVLFMGACMKPPHLAIV   72 (157)
Q Consensus         3 ~~lg~G~~g~v~~~~~~~---~~avk~~~~~~~--~~--~~~~~~~~~e~~~l~~l-~h--~niv~~~~~~~~~~~~~lv   72 (157)
                      +.+|.|....||++....   .+.+|.-.....  .+  +........|...+..+ .+  ..+++++.+  .+...+++
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence            467889999999997633   588886543110  00  11122334566666655 22  234555543  34556799


Q ss_pred             EecCCCCCH
Q psy697           73 TSKCNGHTL   81 (157)
Q Consensus        73 ~e~~~~g~L   81 (157)
                      ||++++..+
T Consensus       110 mE~L~~~~~  118 (392)
T d2pula1         110 MEDLSHLKI  118 (392)
T ss_dssp             ECCCTTSEE
T ss_pred             EeccCCccc
Confidence            999977544

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0016  Score=42.73  Aligned_cols=31  Identities=29%  Similarity=0.847  Sum_probs=27.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKKR  137 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~~  137 (157)
                      .++..||+.+|..||++.++++.|+.+.+.|
T Consensus       233 ~li~~cl~~~p~~Rps~~~il~~L~~i~esg  263 (263)
T d1sm2a_         233 QIMNHCWKERPEDRPAFSRLLRQLAEIAESG  263 (263)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999887653

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.24  E-value=0.0077  Score=40.21  Aligned_cols=29  Identities=24%  Similarity=0.785  Sum_probs=26.1

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..||+.+|.+||++.+++..|+.+-+
T Consensus       264 ~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         264 QLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            58999999999999999999999987643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.0084  Score=39.63  Aligned_cols=29  Identities=31%  Similarity=0.831  Sum_probs=26.2

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..||+.+|..||++.++++.|+.+.+
T Consensus       244 ~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         244 QLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            59999999999999999999999987654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.0056  Score=40.12  Aligned_cols=30  Identities=30%  Similarity=0.779  Sum_probs=26.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +++..||+.+|..||++.++++.|+.+...
T Consensus       231 ~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         231 EVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            599999999999999999999999887543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.04  E-value=0.0074  Score=40.26  Aligned_cols=28  Identities=32%  Similarity=0.842  Sum_probs=25.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      .++..||+.+|..||++.++++.|+.+-
T Consensus       273 ~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         273 NLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            5999999999999999999999998763

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.47  E-value=0.011  Score=39.45  Aligned_cols=27  Identities=33%  Similarity=0.854  Sum_probs=25.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      +++..|++.+|..||++.++++.|+.+
T Consensus       268 ~li~~cl~~dP~~Rps~~eil~~L~~i  294 (299)
T d1fgka_         268 MMMRDCWHAVPSQRPTFKQLVEDLDRI  294 (299)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            699999999999999999999999775

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.23  E-value=0.012  Score=39.25  Aligned_cols=34  Identities=18%  Similarity=0.530  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          102 QQISQDVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       102 ~~i~~~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      ..+.. ++..||..+|..||++.+++..|+.+.++
T Consensus       265 ~~l~~-li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         265 RVMAK-IMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHH-HHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            33455 99999999999999999999999888764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.14  E-value=0.01  Score=39.08  Aligned_cols=29  Identities=28%  Similarity=0.581  Sum_probs=26.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..||+.+|..||++.++++.|+.+.+
T Consensus       244 ~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         244 RLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            58999999999999999999999987654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.10  E-value=0.013  Score=38.11  Aligned_cols=27  Identities=26%  Similarity=0.765  Sum_probs=24.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      +++..||+.+|..||++.++++.|..+
T Consensus       232 ~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         232 TIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            799999999999999999999987643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.00  E-value=0.014  Score=38.98  Aligned_cols=30  Identities=33%  Similarity=0.878  Sum_probs=27.2

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +++..||+.+|..||++.++++.|+.+.+.
T Consensus       257 ~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         257 DLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            599999999999999999999999887654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=93.92  E-value=0.2  Score=33.35  Aligned_cols=129  Identities=15%  Similarity=0.052  Sum_probs=68.9

Q ss_pred             eEEEEEEec--ceEEEEeccCCCCCHHHHHHHHHHHHHHHhcCC-----Cceeeee--eEEecCCceEEEEecCCCCCHh
Q psy697           12 TVYNGNWHG--EVAVKVLDVDYLDDEKTWEAFKLEVTTFRKTRH-----ENLVLFM--GACMKPPHLAIVTSKCNGHTLY   82 (157)
Q Consensus        12 ~v~~~~~~~--~~avk~~~~~~~~~~~~~~~~~~e~~~l~~l~h-----~niv~~~--~~~~~~~~~~lv~e~~~~g~L~   82 (157)
                      .||+++..+  .+++|+..... .   ....+..|...+..+..     +..+..-  ......+..+.++++.+|..+ 
T Consensus        37 ~vy~v~~~dg~~~VlK~~rp~~-~---s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~-  111 (325)
T d1zyla1          37 RVYQFQDEDRRRFVVKFYRPER-W---TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQF-  111 (325)
T ss_dssp             EEEEECCTTCCCEEEEEECTTT-S---CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEEC-
T ss_pred             eeEEEEcCCCCEEEEEEeCCCC-C---CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCC-
Confidence            588887644  49999987643 2   23445667666665522     1111111  122335667888999876432 


Q ss_pred             HHHhhhcccCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCH---------------------------HH----HHHHHh
Q psy697           83 TNIHIYKEKFALNKMSTVGQQISQDVLMKCWSYKPSDRPDF---------------------------IT----LMKSLE  131 (157)
Q Consensus        83 ~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Rp~~---------------------------~~----i~~~l~  131 (157)
                            . ..+......+...+++ +....+.....+|+..                           .+    +...++
T Consensus       112 ------~-~~~~~~~~~lG~~LA~-lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  183 (325)
T d1zyla1         112 ------E-ADNIDQMEAVGRYLGR-MHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT  183 (325)
T ss_dssp             ------C-SSCHHHHHHHHHHHHH-HHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred             ------C-CCCHHHHHHHHHHHHH-HHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHH
Confidence                  1 2344455555555555 4444444444444321                           11    111121


Q ss_pred             cc----ccccccccCCCCcccccccc
Q psy697          132 KL----PKKRILARSPSHPLNLSRSA  153 (157)
Q Consensus       132 ~~----~~~~~~~rd~k~~~~~~~~~  153 (157)
                      ..    ...+++|+|+.+.|++++..
T Consensus       184 ~~~~~~~p~~liHgDlh~~NvL~~~~  209 (325)
T d1zyla1         184 AHWREDFTVLRLHGDCHAGNILWRDG  209 (325)
T ss_dssp             HHCCSCSCCEECCSSCSGGGEEESSS
T ss_pred             HhccccCCceeecCCCCcccEEEeCC
Confidence            11    12357999999999998643

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.022  Score=37.98  Aligned_cols=29  Identities=28%  Similarity=0.858  Sum_probs=25.9

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..||+.+|..||++.++++.|+..-+
T Consensus       266 ~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         266 ELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            69999999999999999999999876543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.75  E-value=0.014  Score=39.18  Aligned_cols=30  Identities=30%  Similarity=0.702  Sum_probs=27.4

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +++..||+.+|..||++.++++.|+.+.+.
T Consensus       265 ~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         265 EVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            599999999999999999999999888654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.71  E-value=0.014  Score=39.12  Aligned_cols=28  Identities=32%  Similarity=0.788  Sum_probs=25.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      .++..||+.+|..||++.++++.|+.+.
T Consensus       279 ~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         279 DIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence            6999999999999999999999998654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.017  Score=37.97  Aligned_cols=26  Identities=42%  Similarity=0.989  Sum_probs=23.8

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEK  132 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~  132 (157)
                      +++..||+.+|..||++.++...|..
T Consensus       246 ~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         246 NVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            59999999999999999999988764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.68  E-value=0.017  Score=37.83  Aligned_cols=28  Identities=36%  Similarity=0.730  Sum_probs=25.3

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      .++..|++.+|..||++.++++.|+.+.
T Consensus       241 ~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         241 QLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            5999999999999999999999988654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.61  E-value=0.029  Score=36.86  Aligned_cols=27  Identities=30%  Similarity=0.778  Sum_probs=24.2

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKL  133 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~  133 (157)
                      +++..||+.+|..||++.++...|+..
T Consensus       241 ~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         241 DLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            589999999999999999999887654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.017  Score=37.76  Aligned_cols=29  Identities=38%  Similarity=0.907  Sum_probs=26.4

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      +++..||+.+|..||++.++++.|+.+.+
T Consensus       240 ~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         240 SLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            69999999999999999999999887654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.23  E-value=0.018  Score=38.06  Aligned_cols=29  Identities=34%  Similarity=0.744  Sum_probs=25.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      +++..||+.+|..||+|.++...|+.+..
T Consensus       243 ~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         243 ALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            59999999999999999999998876543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.16  E-value=0.018  Score=38.19  Aligned_cols=29  Identities=34%  Similarity=0.823  Sum_probs=26.0

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      +++..|++.+|..||++.++++.|+.+-+
T Consensus       268 ~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         268 QTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            58999999999999999999999987643

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.03  E-value=0.026  Score=37.29  Aligned_cols=30  Identities=30%  Similarity=0.898  Sum_probs=26.6

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +++..|++.+|..||++.++++.|+.+..+
T Consensus       247 ~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         247 ELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            689999999999999999999999876543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.49  E-value=0.033  Score=37.39  Aligned_cols=25  Identities=28%  Similarity=0.745  Sum_probs=23.2

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHh
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLE  131 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~  131 (157)
                      +++..|++.+|..||++.++++.|.
T Consensus       298 ~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         298 IIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHh
Confidence            5999999999999999999998874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.32  E-value=0.04  Score=36.33  Aligned_cols=30  Identities=33%  Similarity=0.711  Sum_probs=26.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPKK  136 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~~  136 (157)
                      +++..|++.+|.+||++.++++.|+.....
T Consensus       245 ~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         245 DLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            689999999999999999999998875543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.08  E-value=0.041  Score=36.80  Aligned_cols=29  Identities=28%  Similarity=0.761  Sum_probs=25.7

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhcccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLPK  135 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~~  135 (157)
                      .++..||+.+|..||++.+++..+..+..
T Consensus       244 ~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         244 MIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            58999999999999999999998877643

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.85  E-value=0.23  Score=32.50  Aligned_cols=28  Identities=29%  Similarity=0.419  Sum_probs=24.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHHHHhccc
Q psy697          107 DVLMKCWSYKPSDRPDFITLMKSLEKLP  134 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~~l~~~~  134 (157)
                      .++..|++.++..||++.++...|+.+-
T Consensus       250 ~li~~cl~~~p~~RP~~~~i~~~l~~~~  277 (299)
T d1ckia_         250 TYLNFCRSLRFDDKPDYSYLRQLFRNLF  277 (299)
T ss_dssp             HHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence            4899999999999999999888877654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.72  E-value=0.61  Score=30.06  Aligned_cols=22  Identities=14%  Similarity=0.424  Sum_probs=19.5

Q ss_pred             HHHHHhhcCCCCCCCCHHHHHH
Q psy697          107 DVLMKCWSYKPSDRPDFITLMK  128 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp~~~~i~~  128 (157)
                      +++..|++.+|..||++.++++
T Consensus       244 ~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         244 EIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHcCCChhHCcCHHHHHh
Confidence            6889999999999999998864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.58  E-value=0.75  Score=29.58  Aligned_cols=28  Identities=18%  Similarity=0.306  Sum_probs=23.7

Q ss_pred             HHHHHhhcCCCCCCC-CHHHHHHHHhccc
Q psy697          107 DVLMKCWSYKPSDRP-DFITLMKSLEKLP  134 (157)
Q Consensus       107 ~~~~~~~~~~~~~Rp-~~~~i~~~l~~~~  134 (157)
                      +++..|...+|.+|| ++.++...|..++
T Consensus       247 ~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         247 AVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            588999999999999 7888888777654