Psyllid ID: psy7029

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
Protein Sequence
MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT
Secondary Structure (PSIPRED)
cccEEEEEccccHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHHccccEEEEEccccccccccc
Coil and Loop (DISEMBL)
MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAkenpdwkvhslkvdvtkdAEVVEAFDWINNKFGHIDVMInnagvnefapvt
Flexible Loop (DISEMBL)
MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT
Low Complexity Region (SEG)
MSKIIVVTGASVgigaailralaaKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT
Disordered region (IsUnstruct)
***IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN******
Disordered Region (DISOPRED)
MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV*
Disordered Region (DISEMBL)
MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT
Disordered Region (DISPRO)
*SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF****
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	125	2.2.26 [Sep-21-2011]
P42317	257	Uncharacterized oxidoredu	yes	N/A	0.744	0.361	0.303	2e-06
Q71R50	255	Dehydrogenase/reductase S	yes	N/A	0.76	0.372	0.319	2e-06
Q6P0H7	237	Carbonyl reductase family	yes	N/A	0.552	0.291	0.318	2e-06
Q8CQD2	257	Diacetyl reductase [(S)-a	yes	N/A	0.76	0.369	0.282	3e-06
Q5HKG6	257	Diacetyl reductase [(S)-a	yes	N/A	0.76	0.369	0.282	3e-06
Q4A054	234	Uncharacterized oxidoredu	yes	N/A	0.704	0.376	0.336	8e-06
P50199	256	Gluconate 5-dehydrogenase	no	N/A	0.72	0.351	0.302	1e-05
P0AEK3	244	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.672	0.344	0.310	2e-05
P0AEK2	244	3-oxoacyl-[acyl-carrier-p	N/A	N/A	0.672	0.344	0.310	2e-05
Q49WS9	246	Uncharacterized oxidoredu	no	N/A	0.68	0.345	0.301	3e-05

>sp|P42317|YXJF_BACSU Uncharacterized oxidoreductase YxjF OS=Bacillus subtilis (strain 168) GN=yxjF PE=3 SV=2

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTGA+ GIG  I R  A +G  VI    R E  + A S  A               
Sbjct: 4   QVALVTGAAGGIGFEIAREFAREGASVIVSDLRPEACEKAASKLA--------------- 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                E  DA A          +  DVTK+A+V +  + I  ++G +D+++NNAG+   A
Sbjct: 49  ----EEGFDAAA----------IPYDVTKEAQVADTVNVIQKQYGRLDILVNNAGIQHVA 94

Query: 123 PV 124
           P+
Sbjct: 95  PI 96

Bacillus subtilis (strain 168) (taxid: 224308)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q71R50|DHR11_CHICK Dehydrogenase/reductase SDR family member 11 OS=Gallus gallus GN=DHRS11 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 27/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTGASVGIGAA+ RAL   G +V+G AR    +D  E L A           Q  G
Sbjct: 7   RVALVTGASVGIGAAVARALVQHGMKVVGCARS---VDKIEKLAAEC---------QSAG 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
           +              P   +   K D++ + E++  F  I      +DV INNAG+    
Sbjct: 55  Y--------------PGTLI-PYKCDLSNEEEILSMFSAIKTLHQGVDVCINNAGLARPE 99

Query: 123 PV 124
           P+
Sbjct: 100 PL 101

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6P0H7|CBR4_DANRE Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 52  IVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDV 111
           ++A +GH+++  +R  E   + A+  P      L  DV+K+ EV +AF+ IN   G +  
Sbjct: 21  LLAQRGHRIVLLSRNKEAAQSTAQSLPGENHLGLSCDVSKEEEVQKAFETINKTCGTVGF 80

Query: 112 MINNAGVNE 120
           ++N AG+N 
Sbjct: 81  LVNAAGINR 89

The heteroteramer with HSD17B8 has NADH-dependent 3-ketoacyl-acyl carrier protein reductase activity. May play a role in biosynthesis of fatty acids in mitochondria. The homotetramer may act as NADPH-dependent quinone reductase. Has broad substrate specificity and reduces 9,10-phenanthrenequinone, 1,4-benzoquinone and various other o-quinones and p-quinones (in vitro).

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8CQD2|BUTA_STAES Diacetyl reductase [(S)-acetoin forming] OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 29/124 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MSK  ++TGA+ G+G  I   LA  G  ++       + D  E+L          KG+Q 
Sbjct: 1   MSKTAIITGAAGGLGKGIAERLANDGFNIV-------LQDINEALLLETEKEFKEKGYQA 53

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           + +                      K DV+K  E  E   +   +FG +DVM+NNAGV+ 
Sbjct: 54  VAY----------------------KSDVSKKKEQEELVQFAVTEFGQLDVMVNNAGVDA 91

Query: 121 FAPV 124
             P+
Sbjct: 92  VTPI 95

Catalyzes the irreversible reduction of 2,3-butanediol to (S)-acetoin in the presence of NADH.

Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 4

>sp|Q5HKG6|BUTA_STAEQ Diacetyl reductase [(S)-acetoin forming] OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=butA PE=3 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 29/124 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MSK  ++TG++ G+G  I   LA  G  ++       + D  E+L          KG+Q 
Sbjct: 1   MSKTAIITGSAGGLGKGIAERLANDGFNIV-------LQDINEALLLETEKEFKEKGYQA 53

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           + F                      K DV+K  E  E   +   +FG +DVM+NNAGV+ 
Sbjct: 54  VAF----------------------KSDVSKKKEQEELVQFAVTEFGQLDVMVNNAGVDA 91

Query: 121 FAPV 124
             P+
Sbjct: 92  VTPI 95

Catalyzes the irreversible reduction of 2,3-butanediol to (S)-acetoin in the presence of NADH.

Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 4

>sp|Q4A054|Y0419_STAS1 Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTGAS GIGA+I   LA +G +V+   R        ES  A               
Sbjct: 7   KVAVVTGASSGIGASIAETLANQGVKVVLTGRD-------ESRLAEV------------- 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A+R +       +N    V +  VDVT   EV E  +    KFG ID+++N+AG+
Sbjct: 47  -AKRIQ-------DNKQAVVETSIVDVTHKEEVTELVEKTKEKFGQIDILVNSAGL 94

Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P50199|GNO_GLUOX Gluconate 5-dehydrogenase OS=Gluconobacter oxydans (strain 621H) GN=gno PE=1 SV=1

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 29/119 (24%)

Query: 6   VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           +VTGAS GIG  + + LA  G +V+   R AE +D A+S F                   
Sbjct: 15  LVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGF------------------- 55

Query: 66  RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV 124
                     E    K  +   DVT    V++    I    G ID++INNAG+   AP+
Sbjct: 56  ----------EAEGLKASTAVFDVTDQDAVIDGVAAIERDMGPIDILINNAGIQRRAPL 104

Involved in the non-phosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate. Dependent on NADP, almost inactive with NAD.

Gluconobacter oxydans (strain 621H) (taxid: 290633)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 9

>sp|P0AEK3|FABG_SHIFL 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Shigella flexneri GN=fabG PE=3 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KI +VTGAS GIG AI   LAA+G +VIG A        +E+      D + A G     
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTA-------TSENGAQAISDYLGANGK---- 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                 L ++VT  A +    + I  +FG +D+++NNAG+
Sbjct: 55  ---------------------GLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGI 89

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Shigella flexneri (taxid: 623)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|P0AEK2|FABG_ECOLI 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KI +VTGAS GIG AI   LAA+G +VIG A        +E+      D + A G     
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTA-------TSENGAQAISDYLGANGK---- 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                 L ++VT  A +    + I  +FG +D+++NNAG+
Sbjct: 55  ---------------------GLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGI 89

Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q49WS9|Y1627_STAS1 Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 31/116 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++V+TGAS GIG   +  L+  G +++  ARR + ++           I    GH  + 
Sbjct: 7   KVVVITGASSGIGEETVNLLSENGAKLVLGARRLDRLE----------KIQQKVGHDSVS 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                  K DVTK  EV    +   N FG IDV+INNAG+
Sbjct: 57  IK---------------------KTDVTKPDEVNALIETAYNDFGRIDVLINNAGL 91

Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
170037029	247	3-oxoacyl-[acyl-carrier-protein] reducta	0.712	0.360	0.362	1e-12
31213111	246	AGAP005503-PA [Anopheles gambiae str. PE	0.744	0.378	0.349	2e-12
170030336	247	3-oxoacyl-[acyl-carrier-protein] reducta	0.704	0.356	0.387	3e-12
170063379	247	serine 3-dehydrogenase [Culex quinquefas	0.712	0.360	0.353	4e-12
170037027	245	Acetoin(diacetyl) reductase [Culex quinq	0.712	0.363	0.370	4e-12
403182967	245	AAEL017302-PA [Aedes aegypti]	0.704	0.359	0.362	4e-12
282934967	245	NADP+-dependent farnesol dehydrogenase 1	0.704	0.359	0.362	4e-12
91094083	255	PREDICTED: similar to serine 3-dehydroge	0.696	0.341	0.391	4e-12
195457162	253	GK15026 [Drosophila willistoni] gi|19417	0.72	0.355	0.307	6e-12
157116590	245	oxidoreductase [Aedes aegypti] gi|108876	0.704	0.359	0.362	7e-12

>gi|170037029|ref|XP_001846363.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Culex quinquefasciatus] gi|167879991|gb|EDS43374.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Culex quinquefasciatus]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 27/116 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTGAS GIGAAI ++LA  G  V+G ARR E ++                      
Sbjct: 7   KVAVVTGASSGIGAAITKSLANAGMVVVGLARRVERVE---------------------- 44

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A R ++ D   ++    ++H++K DV+K+ ++++AF W+  KFG +DV++NNAG+
Sbjct: 45  -ALRDDLKDEATRK----RLHAVKCDVSKEEDILKAFSWVEEKFGGVDVLVNNAGI 95

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

>gi|31213111|ref|XP_315499.1| AGAP005503-PA [Anopheles gambiae str. PEST] gi|21299591|gb|EAA11736.1| AGAP005503-PA [Anopheles gambiae str. PEST]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 33/126 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ VVTGAS GIGAA++++LA  G  VIG ARR E                         
Sbjct: 7   RVAVVTGASSGIGAAVVKSLANAGMIVIGLARRVE------------------------- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA-----G 117
              R E +     E    ++H+++ DVT++ ++V AFD I  ++G +DV+INNA     G
Sbjct: 42  ---RVEELRQQLSEQAAQRLHAIRCDVTREEDIVAAFDQIEQQYGGVDVLINNAGIARGG 98

Query: 118 VNEFAP 123
           +N F P
Sbjct: 99  INLFTP 104

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170030336|ref|XP_001843045.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Culex quinquefasciatus] gi|167866937|gb|EDS30320.1| 3-oxoacyl-[acyl-carrier-protein] reductase [Culex quinquefasciatus]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KI VVTG+S GIGAAI+  LA  G  V+G ARR E                         
Sbjct: 7   KIAVVTGSSSGIGAAIVVELAKSGLVVVGLARRVE------------------------- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              + E +     +N    +H++K DV+K+A+V+ AF+W+N+  G IDVM+NNAGV
Sbjct: 42  ---KTEALKQHLTQNVRKNLHAVKCDVSKEADVLGAFEWVNSSLGGIDVMVNNAGV 94

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

>gi|170063379|ref|XP_001867078.1| serine 3-dehydrogenase [Culex quinquefasciatus] gi|167881022|gb|EDS44405.1| serine 3-dehydrogenase [Culex quinquefasciatus]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 27/116 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTGAS GIGAAI ++L   G  V+G ARR E ++                      
Sbjct: 7   KVAVVTGASSGIGAAIAKSLVKAGMVVVGLARRVERVE---------------------- 44

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A R ++ D   ++    ++H++K DV+K+ ++++AF W+  KFG +DV++NNAG+
Sbjct: 45  -ALRDDLKDEATRK----RLHAVKCDVSKEEDILKAFSWVEEKFGGVDVLVNNAGI 95

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170037027|ref|XP_001846362.1| Acetoin(diacetyl) reductase [Culex quinquefasciatus] gi|167879990|gb|EDS43373.1| Acetoin(diacetyl) reductase [Culex quinquefasciatus]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 27/116 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTGAS GIGAAI ++LA  G  V+G ARR E ++                      
Sbjct: 7   KVAVVTGASSGIGAAIAKSLANAGMVVVGLARRVERVE---------------------- 44

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A R ++ D   ++    ++H++K DV+K+ E++EAF W+    G +DV+INNAG+
Sbjct: 45  -ALRDDLEDDETRK----RLHAVKCDVSKEEEILEAFRWVEENLGGVDVLINNAGI 95

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|403182967|gb|EJY57755.1| AAEL017302-PA [Aedes aegypti]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTGAS GIGAAI   LA  G  V+G ARR E                         
Sbjct: 7   KVAVVTGASSGIGAAITTDLAKAGMVVVGLARRVE------------------------- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              R E + A   E+   ++H++K DV+K+ ++ + F W+  KFG +DV++NNAG+
Sbjct: 42  ---RVEALKANLPESAKPRLHAVKCDVSKEEDITQVFKWVEKKFGGVDVLVNNAGI 94

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|282934967|gb|ADB03639.1| NADP+-dependent farnesol dehydrogenase 1 [Aedes aegypti]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTGAS GIGAAI   LA  G  V+G ARR E                         
Sbjct: 7   KVAVVTGASSGIGAAITTDLAKAGMVVVGLARRVE------------------------- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              R E + A   E+   ++H++K DV+K+ ++ + F W+  KFG +DV++NNAG+
Sbjct: 42  ---RVEALKANLPESAKPRLHAVKCDVSKEEDITQVFKWVEEKFGGVDVLVNNAGI 94

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91094083|ref|XP_970629.1| PREDICTED: similar to serine 3-dehydrogenase [Tribolium castaneum] gi|270016176|gb|EFA12624.1| hypothetical protein TcasGA2_TC010257 [Tribolium castaneum]

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 33/120 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTGAS GIGAAI  AL   G                         IVA       G
Sbjct: 11  KVAVVTGASSGIGAAIADALVENGL------------------------IVA-------G 39

Query: 63  FARRAEMIDAMAK--ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           FARR+E+I+A AK  E    K+H++K D++K+ E+++AF W+ +  GH+ ++INNAGV++
Sbjct: 40  FARRSELIEARAKNLEGKKGKLHAVKTDMSKEDEIIKAFKWVEDNLGHVHILINNAGVSK 99

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195457162|ref|XP_002075453.1| GK15026 [Drosophila willistoni] gi|194171538|gb|EDW86439.1| GK15026 [Drosophila willistoni]

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 27/117 (23%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           +K+ VV+GAS GIGAA  RAL   G  V+G ARR E+++                     
Sbjct: 6   NKVAVVSGASSGIGAACARALVGAGLVVVGLARRQELVE--------------------- 44

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                 ++   + K+    ++H+++ D+T++++V+EAFDW   + G  D++++NAG+
Sbjct: 45  ------QLRSELPKDEQRQRMHAVRCDITQESQVLEAFDWAKRQLGGCDILVSNAGI 95

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157116590|ref|XP_001658565.1| oxidoreductase [Aedes aegypti] gi|108876391|gb|EAT40616.1| AAEL007669-PA [Aedes aegypti]

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTG+S GIGAAI + LA  G  V+G ARR E                         
Sbjct: 7   KVAVVTGSSSGIGAAIAKDLAKAGMIVVGLARRVE------------------------- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              R E +     E+    +H++K DV+K+ ++++ F W+  KFG +DVMINNAG+
Sbjct: 42  ---RTEALKEELPESAKELLHAVKCDVSKEEDILKTFQWVEEKFGGVDVMINNAGI 94

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
FB|FBgn0030073	249	CG10962 [Drosophila melanogast	0.672	0.337	0.363	2.5e-09
FB|FBgn0026268	251	antdh "antdh" [Drosophila mela	0.528	0.262	0.442	7.4e-09
FB|FBgn0030332	251	CG9360 [Drosophila melanogaste	0.536	0.266	0.394	4.7e-08
FB|FBgn0036380	266	CG8757 [Drosophila melanogaste	0.496	0.233	0.338	2e-07
FB|FBgn0038878	250	CG3301 [Drosophila melanogaste	0.536	0.268	0.366	2.8e-07
TIGR_CMR|CJE_0920	249	CJE_0920 "oxidoreductase, shor	0.544	0.273	0.347	1.3e-06
FB|FBgn0263830	247	CG40486 [Drosophila melanogast	0.52	0.263	0.362	1.7e-06
FB|FBgn0038946	248	rdhB "retinol dehydrogenase B"	0.528	0.266	0.358	2.9e-06
ZFIN|ZDB-GENE-040426-1796	237	cbr4 "carbonyl reductase 4" [D	0.568	0.299	0.323	3.3e-06
FB|FBgn0040349	255	CG3699 [Drosophila melanogaste	0.56	0.274	0.305	7.7e-06

FB|FBgn0030073 CG10962 [Drosophila melanogaster (taxid:7227)]

 Score = 139 (54.0 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 32/88 (36%), Positives = 51/88 (57%)

Query:    35 RAEMIDFAES-LFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD---WKVHSLKVDVT 90
             R  +I  A S + A    ++ A G QV+G ARR + ++ + +  P     + H  K DV+
Sbjct:     7 RVAVISGASSGIGAACARLLVAAGLQVVGLARRTDRLEQLRQSLPAEQRMRFHQHKCDVS 66

Query:    91 KDAEVVEAFDWINNKFGHIDVMINNAGV 118
             ++ +V  AF+WI  + G IDV+INNAG+
Sbjct:    67 QELQVDTAFEWIEKELGGIDVLINNAGI 94

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0026268 antdh "antdh" [Drosophila melanogaster (taxid:7227)]

 Score = 135 (52.6 bits), Expect = 7.4e-09, P = 7.4e-09
 Identities = 31/70 (44%), Positives = 43/70 (61%)

Query:    51 DIVAAKGHQVIGFARRAEMIDAMAKENPD---WKVHSLKVDVTKDAEVVEAFDWINNKFG 107
             D+V A G  V+G ARR + +  + +E P     K+ +L  DV  ++ V EAFDWI  K G
Sbjct:    25 DLVLA-GMTVVGLARRVDRVKELQRELPAEKRGKLFALYCDVGNESSVNEAFDWIIQKLG 83

Query:   108 HIDVMINNAG 117
              IDV++NNAG
Sbjct:    84 AIDVLVNNAG 93

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0030332 CG9360 [Drosophila melanogaster (taxid:7227)]

 Score = 128 (50.1 bits), Expect = 4.7e-08, P = 4.7e-08
 Identities = 28/71 (39%), Positives = 44/71 (61%)

Query:    51 DIVAAKGHQVIGFARRAEMIDAMAKENP-DW--KVHSLKVDVTKDAEVVEAFDWINNKFG 107
             D+V+ KG  V+G ARR + +  +    P D   + H  K DV+++ EV++AF WI+   G
Sbjct:    25 DLVS-KGLVVVGLARREDRLQELKASLPADQASRFHGRKCDVSQEQEVIDAFAWIDATLG 83

Query:   108 HIDVMINNAGV 118
               DV++NNAG+
Sbjct:    84 GADVLVNNAGI 94

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

FB|FBgn0036380 CG8757 [Drosophila melanogaster (taxid:7227)]

 Score = 123 (48.4 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 22/65 (33%), Positives = 42/65 (64%)

Query:    57 GHQVIGFARRAEMIDAMAKE---NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMI 113
             G  V+G ARR E ++ +          ++H++K D+T++ +V++AFDW   + G +DV++
Sbjct:    44 GMIVVGLARRHERVEKLRSGLSLEQQSRLHAIKCDITQEDQVLKAFDWTCRQLGGVDVLV 103

Query:   114 NNAGV 118
             +NAG+
Sbjct:   104 SNAGI 108

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0038878 CG3301 [Drosophila melanogaster (taxid:7227)]

 Score = 121 (47.7 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 26/71 (36%), Positives = 43/71 (60%)

Query:    51 DIVAAKGHQVIGFARRAEMIDAMAKENP-DW--KVHSLKVDVTKDAEVVEAFDWINNKFG 107
             D+VA KG  V+G ARR +++  +    P D   + H+   DV+ + +V++ F WI+   G
Sbjct:    25 DLVA-KGMVVVGLARREKVLQDIKSSLPADQAARFHTRPCDVSNEQQVIDTFAWIDRTLG 83

Query:   108 HIDVMINNAGV 118
               DV++NNAG+
Sbjct:    84 GADVLVNNAGI 94

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

TIGR_CMR|CJE_0920 CJE_0920 "oxidoreductase, short chain dehydrogenase/reductase family" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 115 (45.5 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 24/69 (34%), Positives = 41/69 (59%)

Query:    50 VDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHI 109
             V+    +G++VI  ARR E ++ +     D K+++L +DV    E+ EA + +  +F  I
Sbjct:    18 VEAFIQEGYKVIALARRKERLEELKNAYKD-KIYTLCIDVRNQKEIFEAIENLPKEFQEI 76

Query:   110 DVMINNAGV 118
             DV+ NNAG+
Sbjct:    77 DVLFNNAGL 85

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

FB|FBgn0263830 CG40486 [Drosophila melanogaster (taxid:7227)]

 Score = 114 (45.2 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 25/69 (36%), Positives = 41/69 (59%)

Query:    52 IVAAKGHQVIGFARRAEMIDAMAKENP---DWKVHSLKVDVTKDAEVVEAFDWINNKFGH 108
             +V+A G  V+G ARR + + A+ ++ P     ++H++  DV     V  AFDWI  + G 
Sbjct:    26 LVSA-GVIVVGLARRVDRMKAIKEQLPPELQGRLHAIHCDVEDLDSVTAAFDWIEEQLGG 84

Query:   109 IDVMINNAG 117
              D+++NNAG
Sbjct:    85 CDILVNNAG 93

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

FB|FBgn0038946 rdhB "retinol dehydrogenase B" [Drosophila melanogaster (taxid:7227)]

 Score = 112 (44.5 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 24/67 (35%), Positives = 40/67 (59%)

Query:    53 VAAKGHQVIGFARRAEMIDAMAKENPD-WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDV 111
             +A  G  V+G ARR E+I+A+  +     K+ + + D+  + ++  AF+WI  KF  I V
Sbjct:    29 LANAGMVVVGLARRVELIEALRDQVTGVGKIFARQCDLNDEEQLASAFNWIREKFQAIHV 88

Query:   112 MINNAGV 118
             +I NAG+
Sbjct:    89 LICNAGI 95

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016063 "rhodopsin biosynthetic process" evidence=IDA

ZFIN|ZDB-GENE-040426-1796 cbr4 "carbonyl reductase 4" [Danio rerio (taxid:7955)]

 Score = 111 (44.1 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 23/71 (32%), Positives = 40/71 (56%)

Query:    52 IVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDV 111
             ++A +GH+++  +R  E   + A+  P      L  DV+K+ EV +AF+ IN   G +  
Sbjct:    21 LLAQRGHRIVLLSRNKEAAQSTAQSLPGENHLGLSCDVSKEEEVQKAFETINKTCGTVGF 80

Query:   112 MINNAGVNEFA 122
             ++N AG+N  A
Sbjct:    81 LVNAAGINRDA 91

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

FB|FBgn0040349 CG3699 [Drosophila melanogaster (taxid:7227)]

 Score = 88 (36.0 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
 Identities = 22/72 (30%), Positives = 35/72 (48%)

Query:    47 AFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKF 106
             A    ++A +G  +    R    ++A  K     +   +  DVTKDA+ +        KF
Sbjct:    23 AAIAQVLAREGATLALVGRNVANLEATKKSLKGTQAEIVVADVTKDADAI--VQQTLAKF 80

Query:   107 GHIDVMINNAGV 118
             G IDV++NNAG+
Sbjct:    81 GRIDVLVNNAGI 92

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	125
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	4e-19
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-17
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	3e-16
cd05233	234	cd05233, SDR_c, classical (c) SDRs	6e-15
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-14
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-14
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-14
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-14
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-14
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-13
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-13
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-13
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	3e-13
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-13
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-12
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-12
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-12
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-12
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-12
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	7e-12
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-11
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-11
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-11
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-11
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	4e-11
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	5e-11
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-11
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	5e-11
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-11
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	6e-11
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-10
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-10
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-10
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-10
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-10
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-10
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-10
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-10
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	4e-10
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	4e-10
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-10
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-10
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-10
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-09
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-09
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-09
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	1e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-09
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-09
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-09
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-09
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-09
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-09
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-09
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-09
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	9e-09
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	1e-08
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-08
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-08
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-08
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-08
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-08
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-08
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-08
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-08
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-08
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-08
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	3e-08
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-08
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	3e-08
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-08
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-08
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-08
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	5e-08
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	6e-08
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	6e-08
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	7e-08
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	7e-08
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	7e-08
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	1e-07
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-07
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-07
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	1e-07
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-07
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-07
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-07
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-07
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-07
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-07
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-07
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-07
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	3e-07
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	3e-07
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-07
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-07
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-07
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-07
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-07
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	4e-07
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	4e-07
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-07
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	4e-07
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	5e-07
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	5e-07
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	5e-07
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	5e-07
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	6e-07
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	7e-07
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	9e-07
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	1e-06
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-06
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-06
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-06
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-06
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-06
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-06
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-06
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-06
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-06
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-06
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	3e-06
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-06
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	5e-06
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	5e-06
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	6e-06
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	6e-06
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	6e-06
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	7e-06
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	9e-06
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-05
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-05
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-05
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-05
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	2e-05
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	3e-05
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-05
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-05
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	3e-05
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	4e-05
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	4e-05
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	4e-05
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	5e-05
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	5e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	6e-05
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	7e-05
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	7e-05
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	7e-05
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	7e-05
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	8e-05
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-04
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-04
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	2e-04
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	2e-04
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-04
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	2e-04
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-04
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-04
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-04
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	2e-04
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-04
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-04
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	3e-04
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-04
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	3e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	3e-04
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	3e-04
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-04
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-04
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	3e-04
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	4e-04
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	4e-04
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	5e-04
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	5e-04
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	7e-04
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	7e-04
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	7e-04
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	7e-04
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	8e-04
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	8e-04
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	8e-04
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	9e-04
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	9e-04
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	0.001
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	0.001
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	0.001
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	0.001
cd08946	200	cd08946, SDR_e, extended (e) SDRs	0.001
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	0.001
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	0.002
cd08950	259	cd08950, KR_fFAS_SDR_c_like, ketoacyl reductase (K	0.002
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	0.002
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	0.002
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	0.002
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	0.002
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	0.003
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	0.003
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	0.003
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	0.003
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	0.003
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	0.003
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	0.003
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	0.003
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	0.004
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	0.004

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 78.8 bits (195), Expect = 4e-19
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 31/117 (26%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            K+ ++TGAS GIG A  RALA  G +V+  ARR E ++                     
Sbjct: 6   GKVALITGASSGIGEATARALAEAGAKVVLAARREERLE--------------------- 44

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                     A+A E       +L +DVT  A V  A + +  +FG ID+++NNAG+
Sbjct: 45  ----------ALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGL 91

Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 75.0 bits (185), Expect = 2e-17
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++++TG S GIG A+  ALAA+G++VI  AR  + ++                      
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLE---------------------- 38

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                         N + +V  L++DVT +  +  A   +  +FG IDV++NNAG   F 
Sbjct: 39  --------SLGELLNDNLEV--LELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFG 88

Query: 123 PV 124
           P+
Sbjct: 89  PL 90

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 71.4 bits (175), Expect = 3e-16
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTGASVGIGAA+ RAL   G +V+G ARR + I                       
Sbjct: 7   RVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKI----------------------- 43

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                E + A  +      +   + D++ + +++  F  I  +   +DV INNAG+
Sbjct: 44  -----EALAAECQSAGYPTLFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGL 94

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 67.7 bits (166), Expect = 6e-15
 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 30/120 (25%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
            +VTGAS GIG AI R LA +G +V+   R  E                           
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEE--------------------------- 33

Query: 65  RRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV 124
                + A+          +++ DV+ + +V    +    +FG +D+++NNAG+    P+
Sbjct: 34  -ALAELAAIEALGG--NAVAVQADVSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPL 90

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 67.5 bits (165), Expect = 1e-14
 Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 27/123 (21%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             K+ +VTGAS GIG AI RALA +G +V+  ARR+E                       
Sbjct: 4   SGKVALVTGASSGIGRAIARALAREGARVVVAARRSE----------------------- 40

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEA-FDWINNKFGHIDVMINNAGVN 119
                 AE + A  KE    +  ++  DV+ D E VEA       +FG ID+++NNAG+ 
Sbjct: 41  ---EEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIA 97

Query: 120 EFA 122
              
Sbjct: 98  GPD 100

Length = 251

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 67.7 bits (166), Expect = 1e-14
 Identities = 41/117 (35%), Positives = 52/117 (44%), Gaps = 37/117 (31%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQV 60
            K+ +VTGAS GIG A  R LAA+G+ V G ARR + M D A                  
Sbjct: 3   KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASL---------------- 46

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                                VH L +DVT +A +  A D I  + G IDV++NNAG
Sbjct: 47  --------------------GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAG 83

Length = 273

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 66.9 bits (164), Expect = 1e-14
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 28/115 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TGAS GIG A  R  A  G ++I   RRAE                         
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAE------------------------- 35

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
             R  E+ D +  + P  KV  L++DV+    +  A + +  +F  ID+++NNAG
Sbjct: 36  --RLQELADELGAKFPV-KVLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAG 87

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 66.1 bits (162), Expect = 4e-14
 Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 30/126 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQ 59
             K  ++TGAS GIGA + + LA +G+ +I  ARR + +   A+ L              
Sbjct: 5   KGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKEL---------EDKTG 55

Query: 60  VIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
           V                    +V  +  D++    +    D +  + G IDV++NNAG  
Sbjct: 56  V--------------------EVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFG 95

Query: 120 EFAPVT 125
            F P  
Sbjct: 96  TFGPFL 101

Length = 265

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 64.8 bits (159), Expect = 8e-14
 Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 29/124 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             K  +VTGAS GIG AI   LAA G +V+ +    E    AE+L       + A G + 
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEA---AEAL----AAELRAAGGEA 56

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                                   L  DV+ +A V    +     FG +D+++NNAG+  
Sbjct: 57  RV----------------------LVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITR 94

Query: 121 FAPV 124
            A +
Sbjct: 95  DALL 98

Length = 246

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 63.9 bits (156), Expect = 2e-13
 Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 29/118 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TG + GIG A  + L  KG +V                              ++ 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVA-----------------------------ILD 31

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                     +   NP  K   ++ DVT   ++  AF     KFG +D++INNAG+ +
Sbjct: 32  RNENPGAAAELQAINPKVKATFVQCDVTSWEQLAAAFKKAIEKFGRVDILINNAGILD 89

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 63.9 bits (156), Expect = 2e-13
 Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 32/125 (25%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             K+ ++TG S GIG AI  AL A+G++V         I                     
Sbjct: 5   KGKVALITGGSKGIGFAIAEALLAEGYKV--------AI--------------------- 35

Query: 61  IGFARRAEMIDAMAKE-NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
              AR  + ++  A E N    V  L  DV  +A+V  A D I   FG +DV+I NAGV 
Sbjct: 36  --TARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVG 93

Query: 120 EFAPV 124
            FAPV
Sbjct: 94  HFAPV 98

Length = 237

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 64.0 bits (156), Expect = 2e-13
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 27/117 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  ++TGAS GIG AI R     G  V+  AR A+ +  A                    
Sbjct: 10  QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQAR------------------- 50

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                   D +A+E P+ +VH L  DV+ D +     DW+ + +  + +++NNAG N
Sbjct: 51  --------DELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGN 99

Length = 257

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 3e-13
 Identities = 38/123 (30%), Positives = 50/123 (40%), Gaps = 37/123 (30%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           SK+ +VTGAS GIG A    LA  G++V G +R                           
Sbjct: 4   SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNP------------------------- 38

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                       A+  P   V  L++DVT DA V  A D +  + G IDV++NNAGV   
Sbjct: 39  ------------ARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLA 86

Query: 122 APV 124
              
Sbjct: 87  GAA 89

Length = 270

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 62.5 bits (153), Expect = 6e-13
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG AI   LAA+G  V+     +E    AE+L    V  + A G     
Sbjct: 6   KVALVTGASRGIGRAIAERLAAQGANVVINYASSE--AGAEAL----VAEIGALGG---- 55

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                             K  +++ DV+    V  A D    +FG +D+++NNAG+
Sbjct: 56  ------------------KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGI 93

Length = 248

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 29/123 (23%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            +++V+TGAS G+G A  RA A +G +V+  AR  E ++            + A G + +
Sbjct: 8   RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEAL-------AAEIRAAGGEAL 60

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                     DV     V  A D    + G ID  +NNA V  F
Sbjct: 61  AVV----------------------ADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVF 98

Query: 122 APV 124
            P 
Sbjct: 99  GPF 101

Length = 334

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 61.4 bits (149), Expect = 2e-12
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 40/122 (32%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG S GIG A++  L  +G  VI F                              
Sbjct: 7   KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDI---------------------------- 38

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                       KE     V   KVDV+   +V++  D++ +K+G ID+++NNAG+  + 
Sbjct: 39  ------------KEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYG 86

Query: 123 PV 124
            +
Sbjct: 87  AI 88

Length = 258

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG AI   LAA+G +V    R  E                         
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEE------------------------- 35

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
               A        +       +L+ DV+    V    + +  +FG +D+++NNAG+
Sbjct: 36  ----AAAETVEEIKALGGNAAALEADVSDREAVEALVEKVEAEFGPVDILVNNAGI 87

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 60.8 bits (148), Expect = 3e-12
 Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 29/123 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG  I   LA  G  ++  +R  E  + A+ L                 
Sbjct: 6   KVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLI---------------- 49

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                        E    +  +   DV+ +  +  A + I   FG ID+++NNAG+    
Sbjct: 50  -------------EKEGVEATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRH 96

Query: 123 PVT 125
           P  
Sbjct: 97  PAE 99

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 60.3 bits (147), Expect = 3e-12
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 28/113 (24%)

Query: 6   VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           +VTGAS GIG AI   LA +G +VI   R +E    AE +    V+ + A G + +G   
Sbjct: 2   LVTGASRGIGRAIALKLAKEGAKVIITYRSSEEG--AEEV----VEELKAYGVKALGV-- 53

Query: 66  RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                 DV+   +V    + I  + G ID+++NNAG+
Sbjct: 54  --------------------VCDVSDREDVKAVVEEIEEELGPIDILVNNAGI 86

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 7e-12
 Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 27/120 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA+ GIGAAI RA A +G  V                     D+ AA   +   
Sbjct: 8   KVALVTGAAQGIGAAIARAFAREGAAVA------------------LADLDAALAERAA- 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                    A+A++    +V ++  DVT  A V  A       FG +DV++NNAG+N FA
Sbjct: 49  --------AAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFA 100

Length = 260

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 30/117 (25%), Positives = 41/117 (35%), Gaps = 32/117 (27%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             K  ++TG S G G    RALA                               A GH+V
Sbjct: 3   SMKTWLITGVSSGFG----RALAQA---------------------------ALAAGHRV 31

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
           +G  R           +PD +  +  +DVT    +          FG IDV++NNAG
Sbjct: 32  VGTVRSEAARADFEALHPD-RALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAG 87

Length = 277

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 1e-11
 Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 29/115 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++++TGAS GIG A    +A  G  V   AR  E +D         V  + AKG     
Sbjct: 372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDEL-------VAEIRAKGGTAHA 424

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
           +                        D+T  A V      I  + GH+D ++NNAG
Sbjct: 425 YT----------------------CDLTDSAAVDHTVKDILAEHGHVDYLVNNAG 457

Length = 657

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 59.2 bits (144), Expect = 1e-11
 Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 27/118 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++V+TGA+ GIG    R LA +G  VI   R  E                  KG +   
Sbjct: 2   KVVVITGANSGIGKETARELAKRGAHVIIACRNEE------------------KGEEA-- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
               AE+     KE  + KV  +++D++  A V +  +    +F  +D++INNAG+  
Sbjct: 42  ---AAEIK----KETGNAKVEVIQLDLSSLASVRQFAEEFLARFPRLDILINNAGIMA 92

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 58.9 bits (143), Expect = 1e-11
 Identities = 39/124 (31%), Positives = 50/124 (40%), Gaps = 30/124 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K+ +VTG S GIG AI RALA  G  V I +       + AE L         AK + V 
Sbjct: 9   KVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEEL---------AKKYGV- 58

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                              K  + K DV+    V + F  I   FG ID++I NAG+   
Sbjct: 59  -------------------KTKAYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVH 99

Query: 122 APVT 125
            P  
Sbjct: 100 KPAL 103

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 4e-11
 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 29/117 (24%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            K  +VTGA+ G+GAA   ALA  G  V                   F D +AA+  ++ 
Sbjct: 7   GKRALVTGAARGLGAAFAEALAEAGATVA------------------FNDGLAAEAREL- 47

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                A  ++A        + H++  D+   A V   FD      G +D ++NNAG+
Sbjct: 48  -----AAALEAAGG-----RAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGI 94

Length = 250

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 5e-11
 Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+++VTG + GIGAAI   LA +G   + F R A   +FAE L                 
Sbjct: 8   KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEEL----------------- 50

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
              RA    A            ++VD+T DA+  +A +    KFG ID ++NNAGVN+
Sbjct: 51  ---RALQPRA----------EFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVND 95

Length = 258

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 57.6 bits (140), Expect = 5e-11
 Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 29/118 (24%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             ++ +VTGA+ GIG AI   LAA G +VI      +  D A +      ++V A G   
Sbjct: 5   EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGD--DAAAT-----AELVEAAG--- 54

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                               K  + +VDV   A +  A       FG +D+++ NAG+
Sbjct: 55  -------------------GKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGI 93

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 57.6 bits (140), Expect = 5e-11
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA+ GIG  I  ALA +G +V+       + D  +   A   + +   G + IG
Sbjct: 5   KVALVTGAASGIGLEIALALAKEGAKVV-------IADLNDEAAAAAAEALQKAGGKAIG 57

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                 + +DVT +  +    D+    FG +D+++NNAG+   A
Sbjct: 58  ----------------------VAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVA 95

Query: 123 PV 124
           P+
Sbjct: 96  PI 97

Length = 258

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.2 bits (139), Expect = 6e-11
 Identities = 37/126 (29%), Positives = 52/126 (41%), Gaps = 30/126 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQ 59
           M K+ +VTGAS GIG AI   LA +G   VI +    E                      
Sbjct: 4   MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEE---------------------- 41

Query: 60  VIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                   E I             ++K DV+ + +V    + I  KFG ID+++NNAG++
Sbjct: 42  --AAQELLEEIKEEGG-----DAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS 94

Query: 120 EFAPVT 125
            F  VT
Sbjct: 95  NFGLVT 100

Length = 247

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 57.4 bits (139), Expect = 6e-11
 Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTGA+ GIG AI RALAA G  V+      E  + A  +           G  VI 
Sbjct: 2   KTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKV-------AGDAGGSVIY 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                 L  DVTK+ E+ +       +FG +D+++NNAG+   A
Sbjct: 55  ----------------------LPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVA 92

Query: 123 PV 124
           P+
Sbjct: 93  PI 94

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 6e-11
 Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 28/117 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             KI +VTGAS G G      LA KG+ VI   R  E                       
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPE----------------------- 38

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
               ++  ++    + N    +   ++DVT D   +  F  +  + G ID+++NNAG
Sbjct: 39  ----KQENLLSQATQLNLQQNIKVQQLDVT-DQNSIHNFQLVLKEIGRIDLLVNNAG 90

Length = 280

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 56.6 bits (137), Expect = 1e-10
 Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG AI   LA  G  V+   R  E  D AE +    V+ + A G + I 
Sbjct: 4   KVALVTGASSGIGKAIAIRLATAGANVVVNYRSKE--DAAEEV----VEEIKAVGGKAI- 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                +++ DV+K+ +VV  F     +FG +D+++NNAG+   A
Sbjct: 57  ---------------------AVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDA 95

Query: 123 PV 124
             
Sbjct: 96  SS 97

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 30/124 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K+ +VTGAS GIG AI + LA  G  V + +A        AE +    V  + A G + I
Sbjct: 4   KVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAA---AEEV----VAEIEAAGGKAI 56

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                 +++ DV+  ++V   FD     FG +D+++NNAGV   
Sbjct: 57  ----------------------AVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLK 94

Query: 122 APVT 125
            P+ 
Sbjct: 95  KPIA 98

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 27/124 (21%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             + I++TGAS G+GA + R  AAKG  +   ARR +                       
Sbjct: 1   TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTD----------------------- 37

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
               R  E+   +    P  KV    +DV    +V E F    ++ G +D +I NAG+ +
Sbjct: 38  ----RLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGK 93

Query: 121 FAPV 124
            A +
Sbjct: 94  GARL 97

Length = 248

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 56.0 bits (135), Expect = 2e-10
 Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 29/123 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG A  RALAA+G  V   ARR +       L A   ++ A  G     
Sbjct: 4   KVALVTGASSGIGEATARALAAEGAAVAIAARRVDR------LEALADELEAEGGK---- 53

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                 L++DVT + +V  A +      G +D+++NNAG+    
Sbjct: 54  -------------------ALVLELDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLG 94

Query: 123 PVT 125
           PV 
Sbjct: 95  PVE 97

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 30/117 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG  I R  AA+G +V+   R  E                A +    I 
Sbjct: 6   KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEA---------------AERVAAEIL 50

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
              RA                ++  DV+ +A+V  A      +FG +D+++NNAG  
Sbjct: 51  AGGRA---------------IAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTT 92

Length = 251

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++++TGAS GIG  +   LA  G +++  ARR E                         
Sbjct: 4   KVVIITGASSGIGEELAYHLARLGARLVLSARREE------------------------- 38

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
              R E + +   E      H + +D++   +  +  +     FG +D++INNAG++  +
Sbjct: 39  ---RLEEVKSECLELGAPSPHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGISMRS 95

Query: 123 PV 124
             
Sbjct: 96  LF 97

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 55.6 bits (134), Expect = 2e-10
 Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTGAS GIG A  R L A+G++V   AR                            
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDE-------------------------- 34

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A +  A A+E     V  L  DV  +A+V  A D +   FG +D ++NNAGV    
Sbjct: 35  ----ARLAAAAAQELE--GVLGLAGDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMK 88

Query: 123 PV 124
           PV
Sbjct: 89  PV 90

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 29/115 (25%)

Query: 4   IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGF 63
           I+++TG   GIG  +    A +G +V+                   +DI      +    
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVV------------------ILDINEKGAEE---- 38

Query: 64  ARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              A  +          KVH  K DV+K  EV EA   I  + G + ++INNAGV
Sbjct: 39  --TANNVRKAGG-----KVHYYKCDVSKREEVYEAAKKIKKEVGDVTILINNAGV 86

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 3e-10
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++++TGAS GIG A+   LA  G Q++  AR    +    SL       +A  G + + 
Sbjct: 2   KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLA---SL----AQELADHGGEALV 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                    DV+         +    +FG ID+++NNAG+
Sbjct: 55  VP----------------------TDVSDAEACERLIEAAVARFGGIDILVNNAGI 88

Length = 263

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 32/118 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFA-ESLFAFFVDIVAAKGHQV 60
           K+ +VTGA+ GIG  I+R LA  G   VI  AR  E    A E L A        +G  V
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRA--------EGLSV 52

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                               + H L  DVT DA +  A D++  K+G +D+++NNAG+
Sbjct: 53  --------------------RFHQL--DVTDDASIEAAADFVEEKYGGLDILVNNAGI 88

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 55.6 bits (135), Expect = 4e-10
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 30/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA+ GIG A  + LAA+G  V+                    D+          
Sbjct: 423 KVALVTGAAGGIGKATAKRLAAEGACVVL------------------ADLDEEAAEAAA- 463

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                      A+     +   +  DVT +A V  AF+     FG +D++++NAG+
Sbjct: 464 -----------AELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI 508

Length = 681

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 54.6 bits (132), Expect = 4e-10
 Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 33/116 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
             +++TG + GIG A+ R     G+ VI                              I 
Sbjct: 6   NTVLITGGTSGIGLALARKFLEAGNTVI------------------------------IT 35

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
             RR E +    KE P+  +H++ +DV     V    + + +++ ++D++INNAG+
Sbjct: 36  -GRREERLAEAKKELPN--IHTIVLDVGDAESVEALAEALLSEYPNLDILINNAGI 88

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.6 bits (132), Expect = 5e-10
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+IV+TG + G+G A+   LA KG      A+ A +ID  +      V    A G +V G
Sbjct: 6   KVIVITGGAQGLGRAMAEYLAQKG------AKLA-LIDLNQEKLEEAVAECGALGTEVRG 58

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +A                       +VT + +V   F  I   FG ++ +INNAG+
Sbjct: 59  YA----------------------ANVTDEEDVEATFAQIAEDFGQLNGLINNAGI 92

Length = 253

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 55.2 bits (133), Expect = 5e-10
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 32/117 (27%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           S++++VTGA+ GIG A  +  A  G QV+   R                         V 
Sbjct: 5   SRVVLVTGAAGGIGRAACQRFARAGDQVVVADR------------------------NVE 40

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
               RA+ +            H+L +DV+ +A++ E F+ ++ +FG IDV++NNAGV
Sbjct: 41  RARERADSLGP--------DHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGV 89

Length = 520

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 54.0 bits (130), Expect = 1e-09
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 30/118 (25%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           +K+ V+TGAS GIG A   ALA +G  V+        +D AE++                
Sbjct: 6   NKVAVITGASTGIGQASAIALAQEGAYVL-------AVDIAEAV---------------- 42

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                +E +D + K N   K  +  VD++ + +V +    I  +FG +DV+ NNAGV+
Sbjct: 43  -----SETVDKI-KSNGG-KAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVD 93

Length = 272

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 32/117 (27%), Positives = 42/117 (35%), Gaps = 38/117 (32%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KII+VTG S GIG AI++ L A G  V+                                
Sbjct: 10  KIIIVTGGSSGIGLAIVKELLANGANVV-------------------------------- 37

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                   D    +        +  DV+   EV      I  KFG ID ++NNAG+N
Sbjct: 38  ------NADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGIN 88

Length = 266

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 27/125 (21%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M+++ VV G    +GA +   LA +G++V                     DI + K   V
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVA------------------VADINSEKAANV 42

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                 A+ I     E  +   +    D T +  V+     ++  FG +D+++ NAG+ +
Sbjct: 43  ------AQEI---NAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAK 93

Query: 121 FAPVT 125
            A +T
Sbjct: 94  AAFIT 98

Length = 259

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 27/116 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ VVTGA+ G+G     ALAAKG  V+   R  +                  KG     
Sbjct: 17  RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLD------------------KGKAAA- 57

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                     +    P   V   ++D+T  A V  A D +   +  ID++INNAGV
Sbjct: 58  --------ARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 53.3 bits (128), Expect = 2e-09
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 33/125 (26%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            +++ +TG + GIG A+    AA G +++   R AE                        
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAE------------------------ 304

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE- 120
           G  + AE   A+  E+   +      D+T +A V  AF  I  ++G +DV++NNAG+ E 
Sbjct: 305 GAKKLAE---ALGDEHLSVQA-----DITDEAAVESAFAQIQARWGRLDVLVNNAGIAEV 356

Query: 121 FAPVT 125
           F P  
Sbjct: 357 FKPSL 361

Length = 520

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 53.2 bits (128), Expect = 2e-09
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 32/115 (27%)

Query: 4   IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGF 63
           I++VTGA+ G G  I R    +GH+VI   RR E +                        
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ----------------------- 38

Query: 64  ARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
             + E+ D          ++  ++DV   A + E    +  ++ +IDV++NNAG+
Sbjct: 39  ELKDELGDN---------LYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGL 84

Length = 248

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 53.2 bits (128), Expect = 2e-09
 Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 29/118 (24%)

Query: 4   IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGF 63
           ++V+TGAS GIG A   A A +G +V+  AR AE +             V   G + I  
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHEL-------AREVRELGGEAI-- 52

Query: 64  ARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                               ++  DV   A+V  A D    +FG ID  +NNAGV  F
Sbjct: 53  --------------------AVVADVADAAQVERAADTAVERFGRIDTWVNNAGVAVF 90

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 29/115 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K I++TGAS GIG A     A +G  V+  ARR +++D      A    I  A G     
Sbjct: 41  KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLD------AVADRITRAGG----- 89

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                   DAMA          +  D++    V      +  + G +D++INNAG
Sbjct: 90  --------DAMA----------VPCDLSDLDAVDALVADVEKRIGGVDILINNAG 126

Length = 293

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 52.8 bits (127), Expect = 2e-09
 Identities = 35/122 (28%), Positives = 48/122 (39%), Gaps = 28/122 (22%)

Query: 4   IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGF 63
           +  V GA  G+GAAI R  AA+G  V   ARR         L A  VDI+   G      
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARR------EAKLEALLVDIIRDAGGSAKAV 54

Query: 64  ARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP 123
                                   D   + EV+  FD I  + G ++V++ NAG N + P
Sbjct: 55  P----------------------TDARDEDEVIALFDLIEEEIGPLEVLVYNAGANVWFP 92

Query: 124 VT 125
           + 
Sbjct: 93  IL 94

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 31/125 (24%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MSK+ ++TGA+ GIG AI   LAA G              F   L    ++  A    Q 
Sbjct: 1   MSKVAIITGAAQGIGRAIAERLAADG--------------FNIVLADLNLEEAAKSTIQE 46

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           I                  +   ++  DVT   +V    D    KFG  DVM+NNAG+  
Sbjct: 47  I--------------SEAGYNAVAVGADVTDKDDVEALIDQAVEKFGSFDVMVNNAGI-- 90

Query: 121 FAPVT 125
            AP+T
Sbjct: 91  -APIT 94

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 51.9 bits (125), Expect = 6e-09
 Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 29/119 (24%)

Query: 7   VTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARR 66
           VTGA+ GIG A+ RALA  G +V    R  E            V  +   G+    +   
Sbjct: 3   VTGAAQGIGYAVARALAEAGARVAAVDRNFE-------QLLELVADLRRYGYPFATY--- 52

Query: 67  AEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT 125
                              K+DV   A V E    +  ++G IDV++N AG+     + 
Sbjct: 53  -------------------KLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAID 92

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.0 bits (123), Expect = 9e-09
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 32/126 (25%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M ++ +VTGA+ G+G AI   LA  G                                 V
Sbjct: 5   MGRVALVTGAARGLGRAIALRLARAGA------------------------------DVV 34

Query: 61  IGFARRAEMIDAMAKENPDW--KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           + +    E  + + +       +  +++ DVT  A +  A      +FG ID+++NNAG+
Sbjct: 35  VHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGI 94

Query: 119 NEFAPV 124
            E  P+
Sbjct: 95  FEDKPL 100

Length = 249

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 51.3 bits (123), Expect = 9e-09
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 32/125 (25%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MSK+ +VTGA  GIG AI + L   G +V        ++D+ E          A K  + 
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKV-------AIVDYNEET----AQAAADKLSKD 49

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
            G         A+A          +K DV+   +V  A   + + FG ++V++NNAGV  
Sbjct: 50  GG--------KAIA----------VKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGV-- 89

Query: 121 FAPVT 125
            AP T
Sbjct: 90  -APTT 93

Length = 256

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
             +++TG + G+G A+ R LAA+G + +    R      A  L                 
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAEL----------------- 43

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               AE+    A      +V     DV     +      +    G +D +++NAGV +  
Sbjct: 44  ---VAELEALGA------EVTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDG 94

Query: 123 PVT 125
           P+ 
Sbjct: 95  PLE 97

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 1e-08
 Identities = 43/124 (34%), Positives = 57/124 (45%), Gaps = 30/124 (24%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           +K+ +VTGAS GIGAAI R LAA G  V + +A  A     A+ L A   +I AA G   
Sbjct: 5   NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAA---ADELVA---EIEAAGG--- 55

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                               +  +++ DV   A V   FD     FG IDV++NNAGV  
Sbjct: 56  --------------------RAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMP 95

Query: 121 FAPV 124
              +
Sbjct: 96  LGTI 99

Length = 245

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 1e-08
 Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 31/118 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
               ++VTG + GIG AI  A A  G +V                              V
Sbjct: 10  DGLRVLVTGGASGIGRAIAEAFAEAGARVH-----------------------------V 40

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              +  A  + A A   P  KV +   DV   A+V   FD    +FG +DV++NNAG+
Sbjct: 41  CDVSEAA--LAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGI 96

Length = 264

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 37/118 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K++ +TG + GIG A  RALAA G +V IG        D         +D   AK     
Sbjct: 6   KVVAITGGARGIGLATARALAALGARVAIG--------D---------LDEALAK----- 43

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGV 118
                A  +           V    +DVT D     AF D +    G IDV++NNAGV
Sbjct: 44  ---ETAAELGL---------VVGGPLDVT-DPASFAAFLDAVEADLGPIDVLVNNAGV 88

Length = 273

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 32/121 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTG + GIG AI    AAKG +V    R  ++ + A  L         AKG     
Sbjct: 16  KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLG-----GNAKGLV--- 67

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    DV+    V  A   + + FG ID+++N+AGV   A
Sbjct: 68  ------------------------CDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLA 103

Query: 123 P 123
           P
Sbjct: 104 P 104

Length = 255

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 50.5 bits (121), Expect = 2e-08
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 31/127 (24%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVI--GFARRAEMIDFAESLFAFFVDIVAAKGH 58
             K+ +VTG++ GIG  I RALAA G  ++  GF   AE+                    
Sbjct: 1   KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEI-------------------- 40

Query: 59  QVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                   A      AK     KV     D++K A + +   +   +FG +D+++NNAG+
Sbjct: 41  -------EAVRAGLAAKHG--VKVLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGI 91

Query: 119 NEFAPVT 125
              AP+ 
Sbjct: 92  QHVAPIE 98

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  +TG   GIG AI +A A  G  V    R+ E+++             AA+      
Sbjct: 4   KVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLE------------AAAEEISSAT 51

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             R                 H ++ DV     V  A D    +FG ID++INNA  N  A
Sbjct: 52  GGR----------------AHPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLA 95

Query: 123 P 123
           P
Sbjct: 96  P 96

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 38/124 (30%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
                ++TGAS GIGAAI R LA                                  H +
Sbjct: 2   ERPTALITGASRGIGAAIARELA--------------------------------PTHTL 29

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           +   R AE +D +A E P        VD+T    +  A +    + G +DV+++NAGV +
Sbjct: 30  LLGGRPAERLDELAAELPG--ATPFPVDLTDPEAIAAAVE----QLGRLDVLVHNAGVAD 83

Query: 121 FAPV 124
             PV
Sbjct: 84  LGPV 87

Length = 227

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 32/120 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             + ++VTG S G+GAAI RA A +G +V                              V
Sbjct: 4   SEQTVLVTGGSRGLGAAIARAFAREGARV------------------------------V 33

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGH-IDVMINNAGVN 119
           + + +  +  +A+A E  D +  +L+ DVT   +V   F      FG  I  ++NNA  +
Sbjct: 34  VNYHQSEDAAEALADELGD-RAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALAD 92

Length = 253

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 17/122 (13%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  VTGAS GIG AI   LA  G  V+  A+ A   D             A      I 
Sbjct: 4   KVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGS----------AKSLPGTIE 53

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               AE I+A        +   + VDV  + +V    +   ++FG +D+++NNAG    +
Sbjct: 54  --ETAEEIEAAGG-----QALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLS 106

Query: 123 PV 124
            V
Sbjct: 107 LV 108

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 35/123 (28%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID--FAESLFAFFVDIVAAKGHQ 59
            K +++TGAS GIG A+  ALAA G +++   R AE ++   A   +      V A    
Sbjct: 5   DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD--- 61

Query: 60  VIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
            +      E + A A+E                                I+V+INNAGVN
Sbjct: 62  -LTSEAGREAVLARAREMGG-----------------------------INVLINNAGVN 91

Query: 120 EFA 122
            FA
Sbjct: 92  HFA 94

Length = 263

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 50.1 bits (120), Expect = 3e-08
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 30/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG + GIG AI + LAA+G  V+                    DI      +V  
Sbjct: 2   KVALVTGGASGIGLAIAKRLAAEGAAVVV------------------ADIDPEIAEKV-- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                    A A +    +   ++ DVT +A+V  AF+    +FG +D++++NAG+
Sbjct: 42  ---------AEAAQGGP-RALGVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGI 87

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.1 bits (120), Expect = 3e-08
 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 32/122 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQ 59
             K+ +VTG+S GIG AI   LA +G    + +AR       AE                
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSR---KAAEET-------------- 45

Query: 60  VIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA--G 117
                  AE I+A+ +     K  ++K +V    ++ E F  I+ +FG +DV +NNA  G
Sbjct: 46  -------AEEIEALGR-----KALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASG 93

Query: 118 VN 119
           V 
Sbjct: 94  VL 95

Length = 250

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 25/123 (20%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TG S GIG A+ + L  +G  VI  AR    ++ A        +I A        
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAV------EEIEAEAN----- 50

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             KV  +  D++   EV +AF     K G  D+++N AG++   
Sbjct: 51  --------------ASGQKVSYISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPG 96

Query: 123 PVT 125
              
Sbjct: 97  LFE 99

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 29/118 (24%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
                ++TGAS GIG A   A A  G  +   AR  + +   E+L       + + G   
Sbjct: 5   SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDAL---EAL----AAELRSTGV-- 55

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                               K  +  +D++    +      +  +FG  DV+INNAG+
Sbjct: 56  --------------------KAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGM 93

Length = 241

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 49.7 bits (119), Expect = 3e-08
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 32/118 (27%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             K+ +VTGA  G G  I R  A +G +V+                    DI A      
Sbjct: 4   EGKVAIVTGAGSGFGEGIARRFAQEGARVV------------------IADINADGA--- 42

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                     + +A +  +    +++ DVTK A+V    +   +KFG +D+++NNAG+
Sbjct: 43  ----------ERVAADIGE-AAIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGI 89

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.3 bits (118), Expect = 4e-08
 Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 31/124 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID-FAESLFAFFVDIVAAKGHQVI 61
           K  ++TGA  GIG A+  ALA +G  V   AR  E +   AE + A+ V +V A      
Sbjct: 8   KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIAT----- 62

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                     DV+   EV  A + + N+ G ID++INNAG+++F
Sbjct: 63  -------------------------ADVSDYEEVTAAIEQLKNELGSIDILINNAGISKF 97

Query: 122 APVT 125
               
Sbjct: 98  GKFL 101

Length = 239

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 49.4 bits (118), Expect = 4e-08
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 31/114 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++++VTGAS G+GAAI R+ A +G +V                              V+ 
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARV------------------------------VVN 30

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
           + R  E  +A+A E  + +  +++ DV    +V    +   N FG +D ++NNA
Sbjct: 31  YYRSTESAEAVAAEAGE-RAIAIQADVRDRDQVQAMIEEAKNHFGPVDTIVNNA 83

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 49.2 bits (118), Expect = 5e-08
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 29/115 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VT AS GIG AI RALA +G +V   AR  E ++ A S          A    V+ 
Sbjct: 2   KVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGG----AGVLAVVA 57

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                E ID +             V+   DA            FG +D+++NNAG
Sbjct: 58  DLTDPEDIDRL-------------VEKAGDA------------FGRVDILVNNAG 87

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 49.0 bits (117), Expect = 6e-08
 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 31/116 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TG + GIG A  R  A  G +V+                    DI    G     
Sbjct: 5   KVAIITGGASGIGEATARLFAKHGARVV------------------IADIDDDAGQ---- 42

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                    A+A E  D  +  +  DVT +A+V  A D    +FG +D+M NNAGV
Sbjct: 43  ---------AVAAELGDPDISFVHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGV 89

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 6e-08
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 30/122 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++VVTGA+ GIGA + R L A+G ++                    VD+          
Sbjct: 10  KVVVVTGAARGIGAELARRLHARGAKLA------------------LVDL---------- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               AE+    A+   D +V ++  DVT  A +  A +    +FG IDV++ NAG+    
Sbjct: 42  --EEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGG 99

Query: 123 PV 124
            V
Sbjct: 100 SV 101

Length = 296

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 48.8 bits (117), Expect = 7e-08
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 36/118 (30%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
           I++TGAS GIG A+   L  +G   +                             V+  A
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSV-----------------------------VVLLA 32

Query: 65  RRAEMI-DAMAKENPDWKVHSLKVDVTKDA---EVVEAFDWINNKFGHIDVMINNAGV 118
           R  E + +   +  P  +V ++K D++  A   +++EA        G  D++INNAG 
Sbjct: 33  RSEEPLQELKEELRPGLRVTTVKADLSDAAGVEQLLEAIRK---LDGERDLLINNAGS 87

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 48.5 bits (116), Expect = 7e-08
 Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 35/117 (29%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG  I RALA  G++V    R  E +                       
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLA---------------------- 38

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGV 118
            A  A              V ++  D   D E   A  D + ++FG IDV+++NAG+
Sbjct: 39  -ALSAS----------GGDVEAVPYDAR-DPEDARALVDALRDRFGRIDVLVHNAGI 83

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 7e-08
 Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  +VTG+S GIG A+   LA  G +VI   R    +  A                    
Sbjct: 11  RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL---------------- 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                        +      H+L  DVT    V  A D    + G ID+++NNAG+    
Sbjct: 55  -------------KGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRT 101

Query: 123 PV 124
           P+
Sbjct: 102 PL 103

Length = 255

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 20/118 (16%)

Query: 1   MSKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGH 58
           M KI +VTGAS   GIGAA+ R LAAKG  +           F      +   +     H
Sbjct: 4   MKKIALVTGASRLNGIGAAVCRRLAAKGIDI-----------FFTYWSPYDKTM-PWGMH 51

Query: 59  QVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
                  + E+      E+   +   +++D+++       F  ++ + G   ++INNA
Sbjct: 52  DKEPVLLKEEI------ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNA 103

Length = 256

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 33/116 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + VVTG + G+G A +  L A+G +V                    +D+  + G  V  
Sbjct: 3   LVAVVTGGASGLGLATVERLLAQGAKV------------------VILDLPNSPGETV-- 42

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
               A++ D             + VDVT + +V  A      KFG +D+++N AG+
Sbjct: 43  ----AKLGD---------NCRFVPVDVTSEKDVKAALALAKAKFGRLDIVVNCAGI 85

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 28/121 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             KII++TGA+  IG A  +AL + G ++I                    DI A      
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLIL------------------ADINAP----- 37

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                  E +          +V +L++D+T    + E  +    KFG ID++INNA  + 
Sbjct: 38  -----ALEQLKEELTNLYKNRVIALELDITSKESIKELIESYLEKFGRIDILINNAYPSP 92

Query: 121 F 121
            
Sbjct: 93  K 93

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 47.9 bits (114), Expect = 1e-07
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 29/116 (25%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           S++ +VTGA+ GIG AI R L  +G +V   AR  E                        
Sbjct: 3   SEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEE------------------------ 38

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                A  +  + +     +      DV    E+         ++G IDV++NNAG
Sbjct: 39  ---GLATTVKELREAGV--EADGRTCDVRSVPEIEALVAAAVARYGPIDVLVNNAG 89

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 29/114 (25%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
           +++TGA+ G+G AI    A +G ++                     D+    G + +   
Sbjct: 3   VMITGAASGLGRAIALRWAREGWRLA------------------LADVNEEGGEETLKLL 44

Query: 65  RRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           R A                  + DV   +++         K+G IDV++NNAGV
Sbjct: 45  REAGG-----------DGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGV 87

Length = 270

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 32/124 (25%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M K+  +TGAS G G A                       + E+           +G +V
Sbjct: 2   MEKVWFITGASRGFGRA-----------------------WTEAALE--------RGDRV 30

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           +  AR    +  +A++  D ++  L +DVT  A V  A +     FG +D+++NNAG   
Sbjct: 31  VATARDTATLADLAEKYGD-RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGL 89

Query: 121 FAPV 124
           F  +
Sbjct: 90  FGMI 93

Length = 275

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 48.0 bits (114), Expect = 2e-07
 Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  VVTGA+ GIG  I   LA  G  V        + D  +       D +   G + IG
Sbjct: 8   KTAVVTGAASGIGKEIALELARAGAAVA-------IADLNQDGANAVADEINKAGGKAIG 60

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            A                      +DVT +  V    D +  +FG +D++++NAG+    
Sbjct: 61  VA----------------------MDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVN 98

Query: 123 PV 124
           P+
Sbjct: 99  PI 100

Length = 262

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 30/121 (24%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQ 59
           M K++++TGAS GIGAA     A +G+ V + + R     D AE++    V  +  +G +
Sbjct: 1   MRKVMIITGASRGIGAATALLAAERGYAVCLNYLRNR---DAAEAV----VQAIRRQGGE 53

Query: 60  VIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
            +  A                       DV  +A+V+  F+ ++ + G +D ++NNAG+ 
Sbjct: 54  ALAVA----------------------ADVADEADVLRLFEAVDRELGRLDALVNNAGIL 91

Query: 120 E 120
           E
Sbjct: 92  E 92

Length = 248

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KI +VTGAS GIG AI + LA +G  VI  +R+ +         A    IVAA G     
Sbjct: 9   KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLD------GCQAVADAIVAAGG----- 57

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
              +AE   A+A        H  +++     ++   F  I  + G +D+++NNA  N
Sbjct: 58  ---KAE---ALA-------CHIGEME-----QIDALFAHIRERHGRLDILVNNAAAN 96

Length = 252

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTG S G+G  I  AL   G +V+  AR+AE             ++  A  H    
Sbjct: 13  KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAE-------------ELEEAAAHL--- 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A  IDA+           +  DV  +A++    +    +FGH+D+++NNAG    A
Sbjct: 57  ---EALGIDALW----------IAADVADEADIERLAEETLERFGHVDILVNNAGATWGA 103

Query: 123 PV 124
           P 
Sbjct: 104 PA 105

Length = 259

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 30/124 (24%)

Query: 3   KIIVVTGAS-VGIGAAILRALAAKGHQVIGFARRAEMI-DFAESLFAFFVDIVAAKGHQV 60
           K+++VT A+  GIG+A  R    +G +V        +I D  E                 
Sbjct: 18  KVVLVTAAAGTGIGSATARRALEEGARV--------VISDIHER---------------- 53

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
               R  E  D +A E    +V ++  DVT +A+V    D    + G +DV++NNAG+  
Sbjct: 54  ----RLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGG 109

Query: 121 FAPV 124
             PV
Sbjct: 110 QTPV 113

Length = 262

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 38/116 (32%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K + VTGA+ GIG A+  A    G +VIGF                              
Sbjct: 9   KTVWVTGAAQGIGYAVALAFVEAGAKVIGF------------------------------ 38

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                   D       D+   +  +DV+  A V +    +  + G +DV++N AG+
Sbjct: 39  --------DQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGI 86

Length = 252

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 32/114 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG +  IGAA+ RAL A G +V                    VDI A  G  V  
Sbjct: 7   KVAIVTGGATLIGAAVARALVAAGARV------------------AIVDIDADNGAAV-- 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
               A  +   A          +  D+T DA +  A   +  +FG +D+++N A
Sbjct: 47  ----AASLGERA--------RFIATDITDDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 3e-07
 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KI ++TGAS GIG AI +A A  G  ++      E++D   +                  
Sbjct: 11  KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLA------------------ 52

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A R   I+A          H    DVT +  V      I  + G ID+++NNAG+
Sbjct: 53  -AYRELGIEA----------HGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGI 97

Length = 265

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 37/121 (30%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++++VTG + GIGA I RA  A G  V+   RRA   +  +   A F    AA       
Sbjct: 7   RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP--ETVDGRPAEF---HAA------- 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    DV    +V    D I  + G +DV++NNAG + +A
Sbjct: 55  -------------------------DVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYA 89

Query: 123 P 123
            
Sbjct: 90  L 90

Length = 252

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 35/117 (29%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
           +++TGAS GIG  ++R L A+G+                              + VI   
Sbjct: 1   VLITGASRGIGLELVRQLLARGN------------------------------NTVIATC 30

Query: 65  RRAEMIDAMAKENP-DWKVHSLKVDVTKDAEVVEAFDWINNKFG--HIDVMINNAGV 118
           R       +A       ++H L++DVT +    E+ + +  + G   +DV+INNAG+
Sbjct: 31  RDPSAATELAALGASHSRLHILELDVTDEIA--ESAEAVAERLGDAGLDVLINNAGI 85

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA+ GIGAAI   LA  G  V+                   +D+ AA       
Sbjct: 211 KVALVTGAARGIGAAIAEVLARDGAHVVC------------------LDVPAAGEA---- 248

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A  A  +   A          L +D+T         + +  + G +D++++NAG+
Sbjct: 249 LAAVANRVGGTA----------LALDITAPDAPARIAEHLAERHGGLDIVVHNAGI 294

Length = 450

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG + G+G A  R L A+G +V+                    DI+  +G     
Sbjct: 6   KVAIVTGGARGLGLAHARLLVAEGAKVV------------------LSDILDEEGQAA-- 45

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                      A E  D       +DVT +       D     FG +DV++NNAG+
Sbjct: 46  -----------AAELGD-AARFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGI 89

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 29/114 (25%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
           +++TGAS GIG A+ R  A  G+ V   ARR + +D                        
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLD-----------------------E 37

Query: 65  RRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            +AE++      NP+  V    +DVT +         +  + G +D++I NAGV
Sbjct: 38  LKAELL------NPNPSVEVEILDVTDEERNQLVIAELEAELGGLDLVIINAGV 85

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 46.9 bits (112), Expect = 4e-07
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 31/117 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++VVTGA  GIG     A A +G +V+                    DI  A       
Sbjct: 316 KLVVVTGAGSGIGRETALAFAREGAEVV------------------ASDIDEA------A 351

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGV 118
             R AE+I A          H+ +VDV+ DA+ +EAF +W+  + G  D+++NNAG+
Sbjct: 352 AERTAELIRAAGAV-----AHAYRVDVS-DADAMEAFAEWVRAEHGVPDIVVNNAGI 402

Length = 582

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 29/118 (24%), Positives = 41/118 (34%), Gaps = 28/118 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M  + +VTG   GIG  I RALAA G  +    R  +             + +AA   ++
Sbjct: 1   MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDD-------------EELAATQQEL 47

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                V     DV   +      D     +G ID ++NNAGV
Sbjct: 48  RALGVE---------------VIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGV 90

Length = 256

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 46.7 bits (111), Expect = 4e-07
 Identities = 31/121 (25%), Positives = 43/121 (35%), Gaps = 30/121 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TGA  GIG  I R  A  G  +I      E+   A+ L          +GH+   
Sbjct: 7   KTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADEL--------CGRGHRCT- 57

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                ++  DV   A V  A      K G ID+++NNAGV    
Sbjct: 58  ---------------------AVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLG 96

Query: 123 P 123
            
Sbjct: 97  S 97

Length = 263

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 46.7 bits (111), Expect = 4e-07
 Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 30/118 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTG + GIG AI+  LA  G +V   AR  + +D         +     KG +V G
Sbjct: 7   KTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELD-------ECLTEWREKGFKVEG 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVN 119
                                    DV+  +E  E  D + + F G +++++NNAG N
Sbjct: 60  SV----------------------CDVSSRSERQELMDTVASHFGGKLNILVNNAGTN 95

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 5e-07
 Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 32/120 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M K++++TGAS GIG A     AA+G  V                               
Sbjct: 1   MRKVVLITGASRGIGRATAVLAAARGWSV------------------------------G 30

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKV--DVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           I +AR A   +  A         +  V  DV  +A+V+  FD + + FG +D ++NNAG+
Sbjct: 31  INYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGI 90

Length = 248

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 5e-07
 Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 29/123 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K I++TG++ GIG  +   LA  G ++I     AE                         
Sbjct: 10  KNILITGSAQGIGFLLATGLAEYGAEIIINDITAE------------------------- 44

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
              RAE+           K H+   +VT   EV  A + I    G IDV+INNAG+    
Sbjct: 45  ---RAELA-VAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRH 100

Query: 123 PVT 125
           P T
Sbjct: 101 PFT 103

Length = 254

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 5e-07
 Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 2  SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFA 47
          S+ ++VTGA+ GIG A+   LA  GHQVIG AR A   DF   LFA
Sbjct: 3  SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-DFPGELFA 47

Length = 234

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 5e-07
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 32/123 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVI--GFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           K++V+TG S G+G A+      +  +V+    +   E  D AE       +I  A G  +
Sbjct: 8   KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAE-------EIKKAGGEAI 60

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                                   +K DVT +++VV        +FG +DVMINNAG+  
Sbjct: 61  A-----------------------VKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIEN 97

Query: 121 FAP 123
             P
Sbjct: 98  AVP 100

Length = 261

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 6e-07
 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ VVTG S GIG A +  L   G  V    R  E                         
Sbjct: 9   RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEE------------------------- 43

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAG 117
             R A     + ++ P  ++ + + DV  D   V AF   +  +FG +D+++NNAG
Sbjct: 44  --RLASAEARLREKFPGARLLAARCDVL-DEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 30/115 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++VVTGA+ GIG  +    AA+G +V+       ++D +E      V  VA        
Sbjct: 9   KVVVVTGAAQGIGRGVALRAAAEGARVV-------LVDRSE-----LVHEVA-------- 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
               AE+  A        +  +L  D+   A    A       FG IDV+INN G
Sbjct: 49  ----AELRAAGG------EALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 45.5 bits (108), Expect = 9e-07
 Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 26/117 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TG+S GIGA      A  G ++    R AE ++                    + 
Sbjct: 4   KVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLE--------------ETRQSCLQ 49

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                +            K+  +  D+T++            KFG +D+++NNAG+ 
Sbjct: 50  AGVSEK------------KILLVVADLTEEEGQDRIISTTLAKFGRLDILVNNAGIL 94

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 35/125 (28%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MSK I++TGA  G G  +   LA KGH VI   + A  +                     
Sbjct: 1   MSKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV--------------------- 39

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
              A RAE             +   K+D+T   +  +A +W       +DV++NNAG+ E
Sbjct: 40  --TALRAEAARR------GLALRVEKLDLTDAIDRAQAAEW------DVDVLLNNAGIGE 85

Query: 121 FAPVT 125
              V 
Sbjct: 86  AGAVV 90

Length = 257

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 31/116 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA+ G+G  I   LA  G  ++G  R     + +E+        V A G     
Sbjct: 6   KVALVTGANTGLGQGIAVGLAEAGADIVGAGRS----EPSETQ-----QQVEALGR---- 52

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                             +  SL  D++    +    D    +FGHID+++NNAG+
Sbjct: 53  ------------------RFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGI 90

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 30/119 (25%)

Query: 7   VTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           VTG S GIG AI   LA +G   VI + +  +                AA          
Sbjct: 3   VTGGSRGIGKAIALRLAERGADVVINYRKSKD----------------AAAE-------- 38

Query: 66  RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV 124
            A  I+ +       K   ++ DV++  +V E F  +  +FG +DV+++NA    F P+
Sbjct: 39  VAAEIEELGG-----KAVVVRADVSQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPL 92

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 27/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++  VTG + GIG    R LAA+G  V+                    D+          
Sbjct: 415 RVAFVTGGAGGIGRETARRLAAEGAHVV------------------LADLNL-------- 448

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                 +   +  +    +  +LK+DVT +  V  AF  +   +G +D+++NNAG+   +
Sbjct: 449 -EAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSS 507

Query: 123 PV 124
           P 
Sbjct: 508 PF 509

Length = 676

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 29/123 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ V+TG +  +G A+ RALA  G +V    R  E  D            + A G + I 
Sbjct: 6   KVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKV-------AKEITALGGRAIA 58

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            A                       DV   A +  A + I  +FG +D++IN AG N   
Sbjct: 59  LA----------------------ADVLDRASLERAREEIVAQFGTVDILINGAGGNHPD 96

Query: 123 PVT 125
             T
Sbjct: 97  ATT 99

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 35/120 (29%), Positives = 50/120 (41%), Gaps = 35/120 (29%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++VTGA+ GIG A + +L A G                           A K   V  
Sbjct: 4   KTVLVTGANRGIGKAFVESLLAHG---------------------------AKK---VYA 33

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             R       +  +  D KV  L++DVT D E ++A      +   +DV+INNAGV + A
Sbjct: 34  AVRDPGSAAHLVAKYGD-KVVPLRLDVT-DPESIKAA---AAQAKDVDVVINNAGVLKPA 88

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 44/118 (37%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M+K +++TGA+ GIG A  RA  A+G QV G                             
Sbjct: 4   MTKTVLITGAASGIGLAQARAFLAQGAQVYG----------------------------- 34

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                    +D   K +     H L++D++ D E    FDW+      +D++ N AG+
Sbjct: 35  ---------VDKQDKPDLSGNFHFLQLDLSDDLE--PLFDWV----PSVDILCNTAGI 77

Length = 235

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 34/117 (29%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            K+ ++TG + GIG AI  A   +G +V         + +  +                 
Sbjct: 7   GKVALITGGTRGIGRAIAEAFLREGAKVA--------VLYNSA----------------- 41

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                    +  AKE  +  V ++K DV    +V ++ + +  +FG +DV++NNAG+
Sbjct: 42  ---------ENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGI 89

Length = 255

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 34/123 (27%), Positives = 45/123 (36%), Gaps = 25/123 (20%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
            S+ +++TG S G+G AI   LAA G  VI                A    I AA G   
Sbjct: 5   DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGR--AEADAVAAGIEAAGG--- 59

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                               K   L  DV   A    A D    +FG +D+++NNAG+  
Sbjct: 60  --------------------KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIAT 99

Query: 121 FAP 123
            A 
Sbjct: 100 DAA 102

Length = 249

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 44.4 bits (105), Expect = 3e-06
 Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 29/116 (25%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            KI +VTGAS GIG  I   L   G  V    R                         + 
Sbjct: 3   GKIALVTGASRGIGRGIALQLGEAGATVYITGR-----------------------TILP 39

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNA 116
                AE I+A        K   ++ D + D EV   F+ +  +  G +D+++NNA
Sbjct: 40  QLPGTAEEIEARGG-----KCIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 44.0 bits (104), Expect = 3e-06
 Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 28/118 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M KI +VTGA  GIG+AI R L   G++VI          F+ +  A   D     G   
Sbjct: 1   MKKIALVTGAKRGIGSAIARELLNDGYRVI-------ATYFSGNDCA--KDWFEEYGFTE 51

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                               +V   ++DVT   E  EA   I  + G +D+++NNAG+
Sbjct: 52  D-------------------QVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGI 90

Length = 245

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ V+TG    +G A+ + LA  G +V    R  E  +      A   +I AA G     
Sbjct: 11  KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAE------AVVAEIKAAGG----- 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                   +A+A          +K DV     + +A   I   FG  D++IN AG N
Sbjct: 60  --------EALA----------VKADVLDKESLEQARQQILEDFGPCDILINGAGGN 98

Length = 278

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 44.0 bits (104), Expect = 3e-06
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 35/115 (30%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
           I++TG + GIG     ALA +  ++                           G+ VI   
Sbjct: 8   ILITGGASGIG----LALAKRFLEL---------------------------GNTVIICG 36

Query: 65  RRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGV 118
           R  E +     ENP+  +H+   DV  D +      +W+  ++ +++V+INNAG+
Sbjct: 37  RNEERLAEAKAENPE--IHTEVCDV-ADRDSRRELVEWLKKEYPNLNVLINNAGI 88

Length = 245

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 4e-06
 Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 38/122 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++VTGAS GIG A   ALA +G +V                       VAA       
Sbjct: 10  KSVLVTGASSGIGRACAVALAQRGARV-----------------------VAA------- 39

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            AR A  +D +A E        L++DV  DA +  A        G  D ++N AG+    
Sbjct: 40  -ARNAAALDRLAGETGC---EPLRLDVGDDAAIRAALA----AAGAFDGLVNCAGIASLE 91

Query: 123 PV 124
             
Sbjct: 92  SA 93

Length = 245

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 43.5 bits (103), Expect = 5e-06
 Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 27/113 (23%)

Query: 6   VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           VVTGAS G+G  + R LAA G +VI   R                    AKG   +   R
Sbjct: 18  VVTGASDGLGLGLARRLAAAGAEVILPVRN------------------RAKGEAAVAAIR 59

Query: 66  RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A          PD K+    +D++  A V    + +  +   I ++INNAGV
Sbjct: 60  TA---------VPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGV 103

Length = 313

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 24/116 (20%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQVI 61
           K + +TGAS GIG AI    A  G  ++  A+ AE       ++     +I AA G    
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ--- 63

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                     A+           L  DV  + +V  A      +FG ID+ +NNA 
Sbjct: 64  ----------ALP----------LVGDVRDEDQVAAAVAKAVERFGGIDICVNNAS 99

Length = 273

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 6e-06
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 29/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++++TG S G+G A+ +  A +G  V+   R  E ++ A+       +I    G     
Sbjct: 2   KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKL------EIEQFPGQ---- 51

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                              V ++++DV    +V +  + I+ KFG ID +INNA  N   
Sbjct: 52  -------------------VLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFIC 92

Query: 123 P 123
           P
Sbjct: 93  P 93

Length = 252

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 6e-06
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 1  MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDF--AESLFAFFVD 51
          M + I++TG S GIGA   RAL + G +V    R+ E +    AE L AF +D
Sbjct: 3  MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLD 55

Length = 277

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 43.2 bits (102), Expect = 6e-06
 Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG + GIG  I   LA  G  V        + D  E         +   G + + 
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVA-------VADLNEETAKETAKEINQAGGKAVA 53

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
           +                      K+DV+   +V  A D    KFG  DVM+NNAGV    
Sbjct: 54  Y----------------------KLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPIT 91

Query: 123 PV 124
           P+
Sbjct: 92  PI 93

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 43.2 bits (102), Expect = 7e-06
 Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +I +VTG   GIG AI + LA  G++V       E                         
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE------------------------- 35

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
             R    +        D++V  ++ DV+       A   +  + G IDV++NNAG+
Sbjct: 36  -ERAEAWLQEQGALGFDFRV--VEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGI 88

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 42.9 bits (101), Expect = 9e-06
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 35/122 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            ++++TG S GIG A+  A  A G++V   AR+AE  D            +AA G     
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAE--DVEA---------LAAAGFT--- 47

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                ++++DV   A +    + +  + G +DV+INNAG     
Sbjct: 48  ---------------------AVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMG 86

Query: 123 PV 124
           P+
Sbjct: 87  PL 88

Length = 274

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG + G+G     ALA  G  +I         +           ++  +G     
Sbjct: 16  KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRR--------LIEKEGR---- 63

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             KV  ++VD+TK     +       +FG ID+++NNAG    A
Sbjct: 64  ------------------KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRA 105

Query: 123 PVT 125
           P+ 
Sbjct: 106 PLL 108

Length = 258

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 42.5 bits (100), Expect = 1e-05
 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 30/118 (25%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           + K+ +VTG + GIG +I+R     G +V                    VD+    G  V
Sbjct: 17  LGKVALVTGGATGIGESIVRLFHKHGAKVC------------------IVDLQDDLGQNV 58

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                     D++  E      H    DVT + +V  A D+  +KFG +D+M+NNAG+
Sbjct: 59  C---------DSLGGEPNVCFFHC---DVTVEDDVSRAVDFTVDKFGTLDIMVNNAGL 104

Length = 280

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 42.5 bits (100), Expect = 1e-05
 Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 28/125 (22%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M+++ VV G    +G  +   LA  G+ V                     DI +    +V
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVA------------------VADINSENAEKV 42

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                 A+ I+A   E           D T +  V+     ++  F  +D+++ +AG+ +
Sbjct: 43  ------ADEINAEYGEKAYG----FGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAK 92

Query: 121 FAPVT 125
            A +T
Sbjct: 93  SAKIT 97

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 37/116 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTGA  GIG A ++AL                               A  G +V+ 
Sbjct: 8   KRALVTGAGKGIGRATVKAL-------------------------------AKAGARVVA 36

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            +R    +D++ +E P   +  + VD++      EA        G +D+++NNA V
Sbjct: 37  VSRTQADLDSLVRECP--GIEPVCVDLSDWDATEEAL----GSVGPVDLLVNNAAV 86

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 37/117 (31%)

Query: 6   VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           VVTGA+ GIG A                       +AE L        A +G  VI  +R
Sbjct: 5   VVTGATDGIGKA-----------------------YAEEL--------AKRGFNVILISR 33

Query: 66  RAEMIDAMAKE---NPDWKVHSLKVDVTKDAEVVEA-FDWINNKFGHIDVMINNAGV 118
             E +DA+AKE       +  ++  D +   ++ E     +      I +++NN G+
Sbjct: 34  TQEKLDAVAKEIEEKYGVETKTIAADFSAGDDIYERIEKELEGL--DIGILVNNVGI 88

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 41.5 bits (97), Expect = 3e-05
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG + GIG AI  ALA +G +V+     ++  + AE+L    V+ +  +GH V  
Sbjct: 7   KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSK--EAAENL----VNELGKEGHDVY- 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                +++ DV+K  +     +   N FG +D+++NNAG+
Sbjct: 60  ---------------------AVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGI 94

Length = 247

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 41.5 bits (97), Expect = 3e-05
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 11/81 (13%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            I+VTG +  IG+ ++  L A GH V G  R  + +D   S   F V  +         
Sbjct: 1  MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDL--------- 51

Query: 63 FARRAEMIDAMAKENPDWKVH 83
               +++D +AK  PD  +H
Sbjct: 52 --TDRDLVDELAKGVPDAVIH 70

Length = 314

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 32/123 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TGA+ GIG A+     A+G +V+                    DI  A+      
Sbjct: 7   KVALLTGAASGIGEAVAERYLAEGARVV------------------IADIKPARARLA-- 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A  I   A         ++ +DVT+   +         +FG ID++ NNA + + A
Sbjct: 47  ----ALEIGPAAI--------AVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMA 94

Query: 123 PVT 125
           P+ 
Sbjct: 95  PIL 97

Length = 257

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 34/127 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKG-- 57
           M+++ +VT +  GIG A    LA +G  + I +    E                 AK   
Sbjct: 1   MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEE----------------GAKETA 44

Query: 58  HQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
            +V     RAE+                ++D++   E  +A D +  + G IDV++NNAG
Sbjct: 45  EEVRSHGVRAEIR---------------QLDLSDLPEGAQALDKLIQRLGRIDVLVNNAG 89

Query: 118 VNEFAPV 124
               AP 
Sbjct: 90  AMTKAPF 96

Length = 256

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 41.0 bits (96), Expect = 4e-05
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 28/115 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+++VTG S GIG  I+RA    G +V+  AR                           G
Sbjct: 10  KVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAA-----------------------G 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
            A  +E    + +  P      +  DVTK+ ++         +FG ID ++NNAG
Sbjct: 47  QALESE----LNRAGPGSCKF-VPCDVTKEEDIKTLISVTVERFGRIDCLVNNAG 96

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 30/124 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TGAS GIG A  +  A +G +V+  ARR   +D    L A   +I A  G  V  
Sbjct: 7   KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELD---QLVA---EIRAEGGEAV-- 58

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN-EF 121
                    A+A +  D       V +  +            +FG +D+  NNAG   E 
Sbjct: 59  ---------ALAGDVRDEAYAKALVALAVE------------RFGGLDIAFNNAGTLGEM 97

Query: 122 APVT 125
            PV 
Sbjct: 98  GPVA 101

Length = 254

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 41.0 bits (96), Expect = 4e-05
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 30/115 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++VVTGA+ GIG  +   LA +G +V+       ++D +E +     +I+AA       
Sbjct: 5   KVVVVTGAAQGIGRGVAERLAGEGARVL-------LVDRSELVHEVLAEILAAGDA---- 53

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                               H    D+   A           +FG +DV+INN G
Sbjct: 54  -------------------AHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVG 89

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 40.9 bits (96), Expect = 5e-05
 Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 34/116 (29%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ V+TG   GIG A  R LAA+G  V+                    DI    G     
Sbjct: 8   RVAVITGGGSGIGLATARRLAAEGATVV------------------VGDIDPEAGKAA-- 47

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
               A+ +  +           +  DVT +  V   FD     +G +D+  NNAG+
Sbjct: 48  ----ADEVGGLF----------VPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGI 89

Length = 255

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 5e-05
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRA--EMIDFAE 43
          + +++TG S G+G AI   L  KG  VI  +R    E+   AE
Sbjct: 2  RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE 44

Length = 251

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 30/116 (25%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
            K  +VTG+S GIGA   + LA  G H V+ + ++A     A  + A   +I AA G   
Sbjct: 6   GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR---ANKVVA---EIEAAGGRAS 59

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
                                  ++  D+T +  V    D    +FG +D ++ NA
Sbjct: 60  -----------------------AVGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 40.2 bits (94), Expect = 7e-05
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 27/116 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++++TG   G+G A    LA +G ++        ++D  E                   
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLS-------LVDLNEEGLE--------------- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A +A +++      PD +V  +K DV+ +A+V    D    +FG ID   NNAG+
Sbjct: 42  -AAKAALLEI----APDAEVLLIKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGI 92

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 7e-05
 Identities = 30/116 (25%), Positives = 42/116 (36%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++  VTGA  GIG  I   LA  G  V  F  R +             D +A     +  
Sbjct: 9   QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD-------------DGLAETAEHIEA 55

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
             RRA  I A               DVT  A++  A      + G + + +N AG+
Sbjct: 56  AGRRAIQIAA---------------DVTSKADLRAAVARTEAELGALTLAVNAAGI 96

Length = 254

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 7e-05
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 29/115 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTG++ G+G  I RALA  G  V+   R A  ++ A       V  + A G     
Sbjct: 12  QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAA-------VAALRAAG----- 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                                +L  D+  +  V  AF  I+ + G +D+++NN G
Sbjct: 60  -----------------GAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVG 97

Length = 256

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 7e-05
 Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 32/123 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MSK   +TGAS G G  +   L A+G +V    RR + +D          D+ A  G ++
Sbjct: 1   MSKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALD----------DLKARYGDRL 50

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                                   L++DVT  A V    D      G IDV+++NAG   
Sbjct: 51  ----------------------WVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGL 88

Query: 121 FAP 123
           F  
Sbjct: 89  FGA 91

Length = 276

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 8e-05
 Identities = 34/120 (28%), Positives = 45/120 (37%), Gaps = 34/120 (28%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M   + +TGAS GIG A+ R  A +G   +G                             
Sbjct: 1   MPLKVFITGASSGIGQALAREYARQG-ATLGLV--------------------------- 32

Query: 61  IGFARRAEMIDAMAKENP-DWKVHSLKVDVTK-DAEVVEAFDWINNKFGHIDVMINNAGV 118
              ARR + + A A   P   +V     DV   DA    A D+I    G  DV+I NAG+
Sbjct: 33  ---ARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIA-AHGLPDVVIANAGI 88

Length = 257

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 29/114 (25%)

Query: 4   IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGF 63
           + +VTG + GIG AI   LA  G  V+                    D+ +     V   
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVV------------------IADLKSEGAEAVA-- 40

Query: 64  ARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                   A+ +     +   L+ +VT + ++        ++FG I +++NNAG
Sbjct: 41  -------AAIQQAGG--QAIGLECNVTSEQDLEAVVKATVSQFGGITILVNNAG 85

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 26/118 (22%)

Query: 7   VTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARR 66
           +TGA+ G+G AI R +A +G +V                  F  DI  A G         
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKV------------------FLTDINDAAG-----LDAF 40

Query: 67  AEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV 124
           A  I+A   E   +   +   DVT +A+         +  G + V++NNAGV  F  +
Sbjct: 41  AAEINAAHGEGVAF---AAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAI 95

Length = 251

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 16/46 (34%), Positives = 27/46 (58%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFV 50
           ++VTGA+ G+G+  +  LA  G+ V+    + E  D+ +SL A  V
Sbjct: 150 VLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEV 195

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 17/32 (53%), Positives = 19/32 (59%)

Query: 4  IIVVTGASVGIGAAILRALAAKGHQVIGFARR 35
           IV+TGA+ GIGAA    L   GH VIG   R
Sbjct: 1  TIVITGAASGIGAATAELLEDAGHTVIGIDLR 32

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 31/117 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             +  +VTGA+ GIG A+ R   A G +V                    +DI AA     
Sbjct: 1   TKRTALVTGAAGGIGQALARRFLAAGDRV------------------LALDIDAAA---- 38

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                    + A A    D +   +  D+T  A +  A      + G +DV++ NAG
Sbjct: 39  ---------LAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAG 86

Length = 257

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 6  VVTGASVGIGAAILRALAAKGHQVIGFARRA 36
          +VTG S G+GAA+   L   G  V+G AR  
Sbjct: 5  IVTGHSRGLGAALAEQLLQPGIAVLGVARSR 35

Length = 243

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 28/117 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +II+VTGAS GIG       A  G  VI   R  E +                       
Sbjct: 5   RIILVTGASDGIGREAALTYARYGATVILLGRNEEKL----------------------- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGV 118
             + A+ I+      P W +  L    T  +E  +     I   +  +D +++NAG+
Sbjct: 42  -RQVADHINEEGGRQPQWFILDLL---TCTSENCQQLAQRIAVNYPRLDGVLHNAGL 94

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 29/115 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K I++TGA   IG+A+++A+   G  VI                A  +D  A        
Sbjct: 5   KTILITGAGGLIGSALVKAILEAGGIVI----------------AADIDKEALN------ 42

Query: 63  FARRAEMIDAMAKENPDWKVHSL-KVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
                E +    K     K  SL ++D+T    + E       K+G ID  +N A
Sbjct: 43  --ELLESLGKEFKS----KKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 32/116 (27%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            K +++TGAS GIGAA   A AA+G  +   AR       A++L A   D+ AA G  V 
Sbjct: 7   GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD------ADALEALAADLRAAHGVDV- 59

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                               VH+L +   +  E + A        G ID+++NNAG
Sbjct: 60  -------------------AVHALDLSSPEAREQLAAE------AGDIDILVNNAG 90

Length = 259

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS G+GA   + LA  G +V+  +RR E +                       
Sbjct: 10  KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLK---------------------- 47

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              RAE+      E      H + +DVT    +  A      + G ID+++NN+GV
Sbjct: 48  -ELRAEI------EAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGV 96

Length = 258

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG + GIG A   A A +G +V+   R A                         G
Sbjct: 8   KVALVTGGAAGIGRATALAFAREGAKVVVADRDAA------------------------G 43

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                 +I     E        +  DVT+DAEV    +     +G +D   NNAG+
Sbjct: 44  GEETVALIREAGGE-----ALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGI 94

Length = 253

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 32/119 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ ++TG   GIG A++    A+G      AR A +                        
Sbjct: 7   QVALITGGGSGIGRALVERFLAEG------ARVAVL------------------------ 36

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
             R AE + ++ +   D  V  ++ DVT  A+   A D   + FG +D  + NAG+ ++
Sbjct: 37  -ERSAEKLASLRQRFGD-HVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDY 93

Length = 263

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 35/123 (28%), Positives = 46/123 (37%), Gaps = 29/123 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTG   GIG A  R  A +G +V  F    E    AE +       + AKG     
Sbjct: 4   KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREA---AEKV----AADIRAKGGNAQA 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
           FA                       D+T    V  A        G +DV++NNAG ++F 
Sbjct: 57  FA----------------------CDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFG 94

Query: 123 PVT 125
           P T
Sbjct: 95  PFT 97

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 34/117 (29%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG   GIG  I       G +V+                  F DI   +G     
Sbjct: 2   KVAIVTGGGHGIGKQICLDFLEAGDKVV------------------FADIDEERG----- 38

Query: 63  FARRAEMIDAMAKENPD-WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A  AE       E P+ + VH    D T    VV A   +  K G IDV++NNA  
Sbjct: 39  -ADFAEA------EGPNLFFVHGDVADETLVKFVVYA---MLEKLGRIDVLVNNAAR 85

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 33/114 (28%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
           I +TG+S G+G A  R L  +GH+V+  AR                              
Sbjct: 10  IFITGSSDGLGLAAARTLLHQGHEVVLHARS----------------------------Q 41

Query: 65  RRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +RA    A AK         L  D++  AE  +  D + N  G  D +I+NAG+
Sbjct: 42  KRA----ADAKAACPGAAGVLIGDLSSLAETRKLADQV-NAIGRFDAVIHNAGI 90

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
          K I+VTGAS G+G  + +A AA G  VI  AR  + ++        +  IV A   +   
Sbjct: 7  KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE------KVYDAIVEAGHPE--P 58

Query: 63 FARRAEMIDAMAKE 76
          FA R +++ A  KE
Sbjct: 59 FAIRFDLMSAEEKE 72

Length = 239

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 16/30 (53%), Positives = 23/30 (76%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFAR 34
          + VTGA+  IG+A++R L A GH+V+G AR
Sbjct: 3  VFVTGATGFIGSAVVRELVAAGHEVVGLAR 32

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 38.2 bits (89), Expect = 3e-04
 Identities = 25/114 (21%), Positives = 36/114 (31%), Gaps = 36/114 (31%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
           ++VTGA+ GIG A+ R L   G  VI       ++                         
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLT--------------- 45

Query: 65  RRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                 +DV   A V E    +  + G ID ++N AGV
Sbjct: 46  ---------------------PLDVADAAAVREVCSRLLAEHGPIDALVNCAGV 78

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 38.2 bits (89), Expect = 3e-04
 Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 38/116 (32%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++T A+ GIG AI  A A +G  VI         D  E            +G     
Sbjct: 3   KVALITAAAQGIGRAIALAFAREGANVIA-------TDINEEKLK-----ELERGP---- 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                              + +  +DVT   +V         + G IDV+ N AG 
Sbjct: 47  ------------------GITTRVLDVTDKEQVAALA----KEEGRIDVLFNCAGF 80

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID 40
          I V GA+   G  +++ L A+GHQV   +R      
Sbjct: 1  IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAP 36

Length = 182

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 32/118 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG + G+GAAI RA A +G                            A G  ++ 
Sbjct: 7   KVALVTGGTQGLGAAIARAFAERG----------------------------AAG--LVI 36

Query: 63  FARRAEMIDAMAKE--NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
             R AE  +A A E      K   ++ D++   +        +  FG +D ++N AG+
Sbjct: 37  CGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGL 94

Length = 260

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 39/117 (33%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+++VTGA+ GIG A +  L A+G                           AAK   V  
Sbjct: 7   KVVLVTGANRGIGRAFVEQLLARG---------------------------AAK---VYA 36

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
            AR     +++    P  +V  L++DVT  A V  A +        + +++NNAG+ 
Sbjct: 37  AARD---PESVTDLGP--RVVPLQLDVTDPASVAAAAE----AASDVTILVNNAGIF 84

Length = 238

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 37.9 bits (88), Expect = 5e-04
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 30/117 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            I +VTG S GIG A    LA +G+ V + + +    +  A+ +      I  A G    
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQN---LHAAQEVVN---LITQAGG---- 51

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                              K   L+ D++ + +VV  F  I+     +  ++NNAG+
Sbjct: 52  -------------------KAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGI 89

Length = 247

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K   VTGA+ GIG A    LAA+G ++                  F  D  A       G
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAEL------------------FLTDRDAD------G 36

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            A+      A+    P+ +     +D++    V      I+   G +DV++N AG++ + 
Sbjct: 37  LAQTVADARALGGTVPEHRA----LDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWG 92

Query: 123 PV 124
            V
Sbjct: 93  TV 94

Length = 272

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 37.3 bits (87), Expect = 7e-04
 Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + +VTGA+  IG AI  ALAA+G++V+    R+E    A+ L     D + A  +  + 
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSE--AEAQRL----KDELNALRNSAVL 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              +A++ D  A             D+   A            FG  DV++NNA  
Sbjct: 55  V--QADLSDFAACA-----------DLVAAAFRA---------FGRCDVLVNNASA 88

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 37.5 bits (87), Expect = 7e-04
 Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 32/121 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA  GIGAA    LA +G +V+             +  A         G  +  
Sbjct: 4   KVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIA---------GGAL-- 52

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                +L+VDVT + +V   F+    +FG +D+++NNAG     
Sbjct: 53  ---------------------ALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLT 91

Query: 123 P 123
           P
Sbjct: 92  P 92

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K I +TGA+ GIG A     AA+G +V  +                  DI          
Sbjct: 2   KSIFITGAASGIGRATALLFAAEGWRVGAY------------------DI---------- 33

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGVNEF 121
                  + A+A E       +  +DVT  A    A  D+     G +DV+ NNAG+   
Sbjct: 34  ---NEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRG 90

Query: 122 AP 123
            P
Sbjct: 91  GP 92

Length = 260

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.5 bits (87), Expect = 7e-04
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 20/116 (17%)

Query: 3   KIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           K+ VVTG S   GIGAAI + LA  G  +                  FF    A      
Sbjct: 7   KVAVVTGVSRLDGIGAAICKELAEAGADI------------------FFTYWTAYDKEMP 48

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
            G  +  ++           KV S+++D+T++    E  + +  + G+  +++NNA
Sbjct: 49  WGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNA 104

Length = 256

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 37.2 bits (86), Expect = 8e-04
 Identities = 15/33 (45%), Positives = 22/33 (66%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAE 37
          I+VTGA+  +G A++R L A+GH+V    R  E
Sbjct: 3  ILVTGATGFVGGAVVRELLARGHEVRAAVRNPE 35

Length = 275

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 37.3 bits (87), Expect = 8e-04
 Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 31/117 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ V+TGA+ G G A  R  AA G +++       + D  +      V  + A+G +V+G
Sbjct: 7   KVAVITGAASGFGLAFARIGAALGMKLV-------LADVQQDALDRAVAELRAQGAEVLG 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGV 118
                                  + DV+ DA  VEA  D    +FG + ++ NNAGV
Sbjct: 60  V----------------------RTDVS-DAAQVEALADAALERFGAVHLLFNNAGV 93

Length = 287

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 37.4 bits (87), Expect = 8e-04
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 38/125 (30%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVD------IVAA 55
            K+++VTGA+ G+G AI                        E L A   +      I+A 
Sbjct: 1   RKVVLVTGANSGLGLAI-----------------------CERLLAEDDENPELTLILAC 37

Query: 56  KGHQVIGFARRAE-MIDAMAKENPDWKVHS--LKVDVTKDAEVVEAFDWINNKFGHIDVM 112
           +  Q      RAE    A+   +PD +V    + VD++    V  A   +  ++  +D +
Sbjct: 38  RNLQ------RAEAACRALLASHPDARVVFDYVLVDLSNMVSVFAAAKELKKRYPRLDYL 91

Query: 113 INNAG 117
             NAG
Sbjct: 92  YLNAG 96

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 37.1 bits (86), Expect = 9e-04
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 16/121 (13%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  +TGA+ G G A    LAA+G  +I     A + D+     A   D+          
Sbjct: 4   KVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDL---------- 53

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A +++A+ +     KV + K DV   AEV    +    +FG +DV++ NAGV  + 
Sbjct: 54  -DETARLVEALGR-----KVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYG 107

Query: 123 P 123
            
Sbjct: 108 R 108

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 37.0 bits (86), Expect = 9e-04
 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 24/115 (20%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQVI 61
           K + +TGAS GIG AI    A  G  V+  A+ AE       +++    +I AA G    
Sbjct: 4   KTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK--- 60

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
                     A+             VD+  + +V  A +    KFG ID+++NNA
Sbjct: 61  ----------ALP----------CIVDIRDEDQVRAAVEKAVEKFGGIDILVNNA 95

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 31/116 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++ +TG   G+G A    LAA+G +V    R A  +          +  V A   ++ G
Sbjct: 8   KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQT-------LPGVPADALRIGG 60

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                   +D+        A D +N +FG +D ++N AG 
Sbjct: 61  ------------------------IDLVDPQAARRAVDEVNRQFGRLDALVNIAGA 92

Length = 239

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 29/119 (24%)

Query: 6   VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           +V GAS GIGAA    LAA G  V   ARR E     E L    VD + A G + + F  
Sbjct: 14  LVAGASSGIGAATAIELAAAGFPVALGARRVEKC---EEL----VDKIRADGGEAVAFP- 65

Query: 66  RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV 124
                                +DVT    V           G I+V+++ AG   F  +
Sbjct: 66  ---------------------LDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKL 103

Length = 274

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +VV G + GI   I +A A  G  V   +R  E +D A       V  +   G + +G
Sbjct: 10  KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAA-------VAQLQQAGPEGLG 62

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            +                       DV   A V  AF  I ++FG IDV+++ A  N  A
Sbjct: 63  VS----------------------ADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPA 100

Query: 123 PV 124
           P 
Sbjct: 101 PA 102

Length = 264

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 32/123 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM-IDFAESLFAFFVDIVAAKGHQVI 61
           KI++VTG S GIG  I +     G +VI  AR+AE   D AE L A+             
Sbjct: 7   KIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAY------------- 53

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                              +  ++  D++ +  +      +  +   +DV++NNAG    
Sbjct: 54  ------------------GECIAIPADLSSEEGIEALVARVAERSDRLDVLVNNAGATWG 95

Query: 122 APV 124
           AP+
Sbjct: 96  APL 98

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFA 42
          I+VTG +  IG+ ++R L  +GH+V+   R   ++  A
Sbjct: 1  ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLDVVVHLA 38

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 36.4 bits (85), Expect = 0.001
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRA 36
          K  +VTG + GIGAA +  L   G +V+  AR  
Sbjct: 10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSR 43

Length = 260

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 33/125 (26%)

Query: 3   KIIVVTGASVGIG---AAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQ 59
            ++++TG S GIG   A  L +  +K  +V      A M D               K  +
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVY-----ATMRDLK-------------KKGR 42

Query: 60  VIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
           +   A  A     +          +L++DV     V  A + +     H+DV++ NAGV 
Sbjct: 43  LWE-AAGALAGGTLE---------TLQLDVCDSKSVAAAVERVTE--RHVDVLVCNAGVG 90

Query: 120 EFAPV 124
              P+
Sbjct: 91  LLGPL 95

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187653 cd08950, KR_fFAS_SDR_c_like, ketoacyl reductase (KR) domain of fungal-type fatty acid synthase (fFAS), classical (c)-like SDRs

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 3  KIIVVTGASVG-IGAAILRALAAKGHQVIGFARR--AEMIDFAESLFAFFVDIVAAKGHQ 59
          K+ +VTGA  G IGA ++  L A G  VI    R   E   F + L+        AKG +
Sbjct: 8  KVALVTGAGPGSIGAEVVAGLLAGGATVIVTTSRFSHERTAFFQKLYRKH----GAKGSK 63

Query: 60 VI 61
          + 
Sbjct: 64 LW 65

KR domain of fungal-type fatty acid synthase (FAS), type I. Fungal-type FAS is a heterododecameric FAS composed of alpha and beta multifunctional polypeptide chains. The KR, an SDR family member, is located centrally in the alpha chain. KR catalyzes the NADP-dependent reduction of ketoacyl-ACP to hydroxyacyl-ACP. KR shares the critical active site Tyr of the Classical SDR and has partial identity of the active site tetrad, but the upstream Asn is replaced in KR by Met. As in other SDRs, there is a glycine rich NAD-binding motif, but the pattern found in KR does not match the classical SDRs, and is not strictly conserved within this group. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 259

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 36.2 bits (84), Expect = 0.002
 Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 31/117 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            ++V+TGAS GIG A   A A +G +++  AR  E      +L A   +   A G +V+ 
Sbjct: 8   AVVVITGASSGIGQATAEAFARRGARLVLAARDEE------ALQAV-AEECRALGAEVL- 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGV 118
                                 +  DVT DA+ V+A       F G IDV +NN GV
Sbjct: 60  ---------------------VVPTDVT-DADQVKALATQAASFGGRIDVWVNNVGV 94

Length = 330

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 28/113 (24%)

Query: 6   VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           +VTGAS GIG AI   LAA+G  +       +             D       +V+   R
Sbjct: 5   IVTGASRGIGRAIATELAARGFDIAINDLPDD-------------DQATEVVAEVLAAGR 51

Query: 66  RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           RA    A               D+ + ++     D     FG +D ++NNAG+
Sbjct: 52  RAIYFQA---------------DIGELSDHEALLDQAWEDFGRLDCLVNNAGI 89

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFV 50
           ++V GA  G+G    +   A G +VI   R  E ++ A+ L A  V
Sbjct: 138 VLVLGAG-GVGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHV 182

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 35.6 bits (83), Expect = 0.002
 Identities = 32/122 (26%), Positives = 44/122 (36%), Gaps = 38/122 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQ--V 60
           +II+VTGA  GIG       A  G  VI   R        E L A + +I AA G Q  +
Sbjct: 13  RIILVTGAGDGIGREAALTYARHGATVILLGRT------EEKLEAVYDEIEAAGGPQPAI 66

Query: 61  IGF----ARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
           I      A        +A                           I  +FG +D +++NA
Sbjct: 67  IPLDLLTATPQNYQQ-LADT-------------------------IEEQFGRLDGVLHNA 100

Query: 117 GV 118
           G+
Sbjct: 101 GL 102

Length = 247

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 35.6 bits (83), Expect = 0.003
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVI--GFARRAEMIDF--AESLFAFF 49
          I+V GA+  IG A+ + L+A GH+VI  G +     +D     S+ A F
Sbjct: 1  IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSGDYQVDITDEASIKALF 49

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 8/99 (8%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRA--------EMIDFAESLFAFFVDIVAAK 56
          I++ GA+  IG A+ R L  +GH+V    R          E +   E        +  A 
Sbjct: 1  ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDSLSDAV 60

Query: 57 GHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEV 95
              +         D       D +     ++  K+A V
Sbjct: 61 QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGV 99

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 29/119 (24%)

Query: 6   VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           ++TGAS GIG  +  A    G QV   AR  + ++          D +   G +V+    
Sbjct: 13  LITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKL-------ADEIGTSGGKVV---- 61

Query: 66  RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV 124
                              +  DV++  +V    D +  + G ID+ + NAG+    P+
Sbjct: 62  ------------------PVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPM 102

Length = 253

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 35.6 bits (82), Expect = 0.003
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 29/120 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VT ++ GIG AI R LA  G  V+  +R+ + +D A       V  +  +G  V G
Sbjct: 11  KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRA-------VATLQGEGLSVTG 63

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                   V   +D E + A     N  G +D++++NA VN F 
Sbjct: 64  TV--------------------CHVGKAEDRERLVAT--AVNLHGGVDILVSNAAVNPFF 101

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 35.6 bits (82), Expect = 0.003
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 29/115 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TGA  GIG  I    A  G  V+     A+    A  +    VD +   G Q   
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADA---ANHV----VDEIQQLGGQAFA 64

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                                  + D+T + E+    D+  +K G +D+++NNAG
Sbjct: 65  ----------------------CRCDITSEQELSALADFALSKLGKVDILVNNAG 97

Length = 255

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 35.3 bits (82), Expect = 0.003
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 33/116 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++VV+    G+G  + R LA +                            A  G  V+ 
Sbjct: 6   KVVVVS----GVGPGLGRTLAVR---------------------------AARAGADVVL 34

Query: 63  FARRAEMIDAMAKENPDWKVHSLKV--DVTKDAEVVEAFDWINNKFGHIDVMINNA 116
            AR AE +D +A E  D    +L V  D+T + +          +FG +D ++NNA
Sbjct: 35  AARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNA 90

Length = 258

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 35.4 bits (82), Expect = 0.003
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 1  MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE 37
          M K +++TG S GIG      L  +G++V+   R+ +
Sbjct: 1  MQKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPD 37

Length = 256

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 31/115 (26%), Positives = 43/115 (37%), Gaps = 29/115 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ VVTGA  G+GAAI  A A  G  V+  AR    +           D VA    Q+  
Sbjct: 11  QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL-----------DEVAE---QIRA 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
             RRA               H +  D+                FG +D+++NN G
Sbjct: 57  AGRRA---------------HVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVG 96

Length = 263

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 1  MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARR 35
          M   I++TGA   IG A+   L A+G  VI   R 
Sbjct: 1  MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRT 35

Length = 236

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIV 53
          I+VTGA+  +G+ ++RAL A+G++V    R       A  L    V++V
Sbjct: 1  ILVTGATGFLGSNLVRALLAQGYRVRALVRSG---SDAVLLDGLPVEVV 46

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	125
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.88
KOG1205|consensus	282		99.87
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.87
KOG1201|consensus	300		99.85
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.82
PRK07062	265	short chain dehydrogenase; Provisional	99.8
PRK05854	313	short chain dehydrogenase; Provisional	99.8
KOG1208|consensus	314		99.79
PRK08251	248	short chain dehydrogenase; Provisional	99.78
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.77
PRK05876	275	short chain dehydrogenase; Provisional	99.77
PRK07063	260	short chain dehydrogenase; Provisional	99.77
PRK08643	256	acetoin reductase; Validated	99.77
KOG0725|consensus	270		99.77
PRK05867	253	short chain dehydrogenase; Provisional	99.77
PRK08339	263	short chain dehydrogenase; Provisional	99.76
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.76
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
KOG4169|consensus	261		99.76
PRK06139	330	short chain dehydrogenase; Provisional	99.75
PRK08265	261	short chain dehydrogenase; Provisional	99.75
PRK06197	306	short chain dehydrogenase; Provisional	99.75
PRK07024	257	short chain dehydrogenase; Provisional	99.75
PRK07791	286	short chain dehydrogenase; Provisional	99.75
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.75
PRK06720	169	hypothetical protein; Provisional	99.75
KOG1200|consensus	256		99.75
PRK05872	296	short chain dehydrogenase; Provisional	99.75
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK07478	254	short chain dehydrogenase; Provisional	99.74
PRK08862	227	short chain dehydrogenase; Provisional	99.74
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.74
PRK08589	272	short chain dehydrogenase; Validated	99.74
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK07109	334	short chain dehydrogenase; Provisional	99.73
PRK06194	287	hypothetical protein; Provisional	99.73
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK12743	256	oxidoreductase; Provisional	99.73
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK05599	246	hypothetical protein; Provisional	99.73
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.73
PRK05866	293	short chain dehydrogenase; Provisional	99.73
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.73
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK07825	273	short chain dehydrogenase; Provisional	99.73
PRK06114	254	short chain dehydrogenase; Provisional	99.73
PRK06483	236	dihydromonapterin reductase; Provisional	99.73
PRK06398	258	aldose dehydrogenase; Validated	99.73
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.72
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.72
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.72
PRK06180	277	short chain dehydrogenase; Provisional	99.72
PRK06482	276	short chain dehydrogenase; Provisional	99.72
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
PRK08267	260	short chain dehydrogenase; Provisional	99.72
PRK08303	305	short chain dehydrogenase; Provisional	99.72
PRK09242	257	tropinone reductase; Provisional	99.72
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.71
PRK05993	277	short chain dehydrogenase; Provisional	99.71
PRK08263	275	short chain dehydrogenase; Provisional	99.71
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.71
PRK05717	255	oxidoreductase; Validated	99.71
PRK07677	252	short chain dehydrogenase; Provisional	99.71
PRK06179	270	short chain dehydrogenase; Provisional	99.71
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.71
PRK07831	262	short chain dehydrogenase; Provisional	99.71
PRK07067	257	sorbitol dehydrogenase; Provisional	99.71
PLN02253	280	xanthoxin dehydrogenase	99.71
PRK09186	256	flagellin modification protein A; Provisional	99.71
PRK07814	263	short chain dehydrogenase; Provisional	99.71
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.71
PRK06500	249	short chain dehydrogenase; Provisional	99.71
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.71
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK07890	258	short chain dehydrogenase; Provisional	99.7
PRK07074	257	short chain dehydrogenase; Provisional	99.7
PRK06182	273	short chain dehydrogenase; Validated	99.7
PRK07454	241	short chain dehydrogenase; Provisional	99.7
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.7
PRK06196	315	oxidoreductase; Provisional	99.7
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.7
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.7
PRK06138	252	short chain dehydrogenase; Provisional	99.7
PRK08278	273	short chain dehydrogenase; Provisional	99.69
PRK06914	280	short chain dehydrogenase; Provisional	99.69
PRK07856	252	short chain dehydrogenase; Provisional	99.69
PRK06484	520	short chain dehydrogenase; Validated	99.69
PRK06172	253	short chain dehydrogenase; Provisional	99.69
PRK09134	258	short chain dehydrogenase; Provisional	99.69
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.69
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.69
PRK07576	264	short chain dehydrogenase; Provisional	99.69
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.69
PRK05693	274	short chain dehydrogenase; Provisional	99.69
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
KOG1014|consensus	312		99.68
PRK08628	258	short chain dehydrogenase; Provisional	99.68
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.68
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK06128	300	oxidoreductase; Provisional	99.68
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.68
PRK08226	263	short chain dehydrogenase; Provisional	99.68
PRK06484	520	short chain dehydrogenase; Validated	99.68
PRK06940	275	short chain dehydrogenase; Provisional	99.68
PRK12937	245	short chain dehydrogenase; Provisional	99.68
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.68
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.68
PRK09135	249	pteridine reductase; Provisional	99.68
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.68
PRK06123	248	short chain dehydrogenase; Provisional	99.68
PRK07035	252	short chain dehydrogenase; Provisional	99.68
PRK05855	582	short chain dehydrogenase; Validated	99.67
PRK07774	250	short chain dehydrogenase; Provisional	99.67
PRK05650	270	short chain dehydrogenase; Provisional	99.67
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.67
PRK06841	255	short chain dehydrogenase; Provisional	99.67
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.67
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.67
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.67
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.67
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.66
PRK12939	250	short chain dehydrogenase; Provisional	99.66
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.66
PRK12744	257	short chain dehydrogenase; Provisional	99.66
PRK07832	272	short chain dehydrogenase; Provisional	99.66
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.66
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.66
PRK06949	258	short chain dehydrogenase; Provisional	99.66
PRK07985	294	oxidoreductase; Provisional	99.66
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.66
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.66
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.66
PRK06523	260	short chain dehydrogenase; Provisional	99.65
PRK07326	237	short chain dehydrogenase; Provisional	99.65
PRK09072	263	short chain dehydrogenase; Provisional	99.65
PRK05875	276	short chain dehydrogenase; Provisional	99.65
PRK06181	263	short chain dehydrogenase; Provisional	99.65
PRK07904	253	short chain dehydrogenase; Provisional	99.65
PLN02780	320	ketoreductase/ oxidoreductase	99.64
PRK07069	251	short chain dehydrogenase; Validated	99.64
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.64
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.64
KOG1199|consensus	260		99.64
PRK06701	290	short chain dehydrogenase; Provisional	99.64
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.64
PRK06057	255	short chain dehydrogenase; Provisional	99.64
PRK07806	248	short chain dehydrogenase; Provisional	99.64
PRK12747	252	short chain dehydrogenase; Provisional	99.64
PRK12829	264	short chain dehydrogenase; Provisional	99.63
PRK10538	248	malonic semialdehyde reductase; Provisional	99.63
PRK06125	259	short chain dehydrogenase; Provisional	99.63
PRK07775	274	short chain dehydrogenase; Provisional	99.63
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.63
PRK12828	239	short chain dehydrogenase; Provisional	99.63
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.63
PLN00015	308	protochlorophyllide reductase	99.63
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK07201	657	short chain dehydrogenase; Provisional	99.63
COG1028	251	FabG Dehydrogenases with different specificities (	99.63
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.62
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK06198	260	short chain dehydrogenase; Provisional	99.62
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.62
PRK12827	249	short chain dehydrogenase; Provisional	99.62
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK12746	254	short chain dehydrogenase; Provisional	99.62
KOG1209|consensus	289		99.62
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.61
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.61
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.6
PRK07102	243	short chain dehydrogenase; Provisional	99.6
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.6
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.6
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.59
PRK09291	257	short chain dehydrogenase; Provisional	99.59
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
PRK08703	239	short chain dehydrogenase; Provisional	99.57
PRK08324	681	short chain dehydrogenase; Validated	99.57
KOG1610|consensus	322		99.57
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK08017	256	oxidoreductase; Provisional	99.56
PRK08177	225	short chain dehydrogenase; Provisional	99.56
PRK06924	251	short chain dehydrogenase; Provisional	99.55
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.55
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.55
PRK07023	243	short chain dehydrogenase; Provisional	99.55
PRK06101	240	short chain dehydrogenase; Provisional	99.54
KOG1478|consensus	341		99.54
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.53
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.53
PRK12367	245	short chain dehydrogenase; Provisional	99.52
PRK12742	237	oxidoreductase; Provisional	99.51
PRK07577	234	short chain dehydrogenase; Provisional	99.51
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.5
PRK08264	238	short chain dehydrogenase; Validated	99.5
PRK07041	230	short chain dehydrogenase; Provisional	99.49
KOG1207|consensus	245		99.49
PRK05884	223	short chain dehydrogenase; Provisional	99.49
PRK07060	245	short chain dehydrogenase; Provisional	99.48
PRK06953	222	short chain dehydrogenase; Provisional	99.46
KOG1210|consensus	331		99.46
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.46
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.46
PRK08219	227	short chain dehydrogenase; Provisional	99.45
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.43
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.42
KOG1611|consensus	249		99.41
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.4
PRK07578	199	short chain dehydrogenase; Provisional	99.39
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.39
PLN03209	576	translocon at the inner envelope of chloroplast su	99.37
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.35
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.32
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.31
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.31
KOG1502|consensus	327		99.31
PRK08309	177	short chain dehydrogenase; Provisional	99.29
PLN02653	340	GDP-mannose 4,6-dehydratase	99.28
PLN00198	338	anthocyanidin reductase; Provisional	99.28
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.27
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.26
PLN02240	352	UDP-glucose 4-epimerase	99.26
PLN02214	342	cinnamoyl-CoA reductase	99.25
PLN02650	351	dihydroflavonol-4-reductase	99.22
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.22
PLN02572	442	UDP-sulfoquinovose synthase	99.2
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.19
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.17
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.17
PLN02686	367	cinnamoyl-CoA reductase	99.16
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.15
PLN02427	386	UDP-apiose/xylose synthase	99.13
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.11
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	99.11
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.1
CHL00194	317	ycf39 Ycf39; Provisional	99.1
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.09
PLN02583	297	cinnamoyl-CoA reductase	99.09
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.09
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.08
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.07
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.07
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.06
KOG1371|consensus	343		99.05
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.04
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.01
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.01
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.95
PLN02260	668	probable rhamnose biosynthetic enzyme	98.92
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.91
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.9
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.89
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.88
PRK05865	854	hypothetical protein; Provisional	98.85
KOG1204|consensus	253		98.84
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.81
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.78
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.77
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.77
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.75
PRK07201	657	short chain dehydrogenase; Provisional	98.73
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.73
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.71
PLN02503	605	fatty acyl-CoA reductase 2	98.69
PLN02206	442	UDP-glucuronate decarboxylase	98.68
PRK12320	699	hypothetical protein; Provisional	98.68
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.68
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.67
PLN02996	491	fatty acyl-CoA reductase	98.65
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.64
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.61
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.61
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	98.61
PRK09620	229	hypothetical protein; Provisional	98.57
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.56
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.55
PLN02778	298	3,5-epimerase/4-reductase	98.54
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.53
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.51
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.48
PLN00016	378	RNA-binding protein; Provisional	98.48
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.47
KOG1430|consensus	361		98.46
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.45
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.39
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.39
KOG2865|consensus	391		98.37
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.36
KOG2733|consensus	423		98.24
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.24
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.18
PLN02260	668	probable rhamnose biosynthetic enzyme	98.17
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.13
KOG1221|consensus	467		98.07
KOG1429|consensus	350		98.03
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.03
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.9
COG2910	211	Putative NADH-flavin reductase [General function p	97.9
PRK14982	340	acyl-ACP reductase; Provisional	97.79
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.75
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.63
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.54
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.53
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.5
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.48
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.47
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.44
PRK06849	389	hypothetical protein; Provisional	97.44
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.4
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.39
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.37
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.35
COG3268	382	Uncharacterized conserved protein [Function unknow	97.33
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.32
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.31
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.28
KOG1202|consensus	2376		97.24
KOG1198|consensus	347		97.2
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.19
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.16
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.14
KOG1372|consensus	376		97.1
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.06
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.04
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.04
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.03
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.02
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.98
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.97
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.96
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.96
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.95
PRK09496	453	trkA potassium transporter peripheral membrane com	96.94
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.92
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.87
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.86
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.86
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.77
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.71
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.7
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.7
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.69
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.68
KOG1203|consensus	411		96.68
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.67
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.67
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.67
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.63
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.62
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	96.61
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.59
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.59
PTZ00325	321	malate dehydrogenase; Provisional	96.59
PLN00106	323	malate dehydrogenase	96.56
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.56
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.54
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.53
PRK04148	134	hypothetical protein; Provisional	96.5
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	96.48
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.44
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.43
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.37
PLN00203	519	glutamyl-tRNA reductase	96.36
PRK09496	453	trkA potassium transporter peripheral membrane com	96.35
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.35
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.32
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.31
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.31
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.31
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	96.3
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.3
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.27
PLN02740	381	Alcohol dehydrogenase-like	96.22
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.16
KOG4039|consensus	238		96.15
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.13
KOG0747|consensus	331		96.12
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.1
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.1
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.09
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.08
PRK13886	241	conjugal transfer protein TraL; Provisional	96.07
PRK10669	558	putative cation:proton antiport protein; Provision	96.05
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.0
PRK08223	287	hypothetical protein; Validated	95.99
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.96
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.94
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	95.92
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.91
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.9
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.88
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.88
COG2894	272	MinD Septum formation inhibitor-activating ATPase	95.88
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.88
PTZ00354	334	alcohol dehydrogenase; Provisional	95.86
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.83
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.82
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.81
PRK05086	312	malate dehydrogenase; Provisional	95.81
PRK07877	722	hypothetical protein; Provisional	95.78
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.76
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.73
KOG1431|consensus	315		95.72
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.72
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.71
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.69
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.67
PLN02827	378	Alcohol dehydrogenase-like	95.64
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.62
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.61
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.58
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.56
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.55
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	95.54
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.49
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.48
PLN02928	347	oxidoreductase family protein	95.45
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.45
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.43
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.42
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.42
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.41
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.4
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.4
PRK12767	326	carbamoyl phosphate synthase-like protein; Provisi	95.39
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.39
KOG0023|consensus	360		95.37
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.36
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.33
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.3
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.3
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.29
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.25
PF03668	284	ATP_bind_2: P-loop ATPase protein family; InterPro	95.24
PRK14851	679	hypothetical protein; Provisional	95.22
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.21
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.2
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.19
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.16
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.09
PRK08655	437	prephenate dehydrogenase; Provisional	95.03
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.02
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.98
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.91
KOG4022|consensus	236		94.85
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	94.83
PRK07411	390	hypothetical protein; Validated	94.83
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	94.82
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	94.77
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	94.75
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.74
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.73
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	94.69
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.65
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	94.63
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	94.61
PRK08328	231	hypothetical protein; Provisional	94.61
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	94.59
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	94.56
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.56
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.52
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.5
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.47
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.47
PRK12480	330	D-lactate dehydrogenase; Provisional	94.45
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	94.44
PRK06487	317	glycerate dehydrogenase; Provisional	94.44
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.36
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.35
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	94.33
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	94.3
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	94.27
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	94.26
PRK14852	989	hypothetical protein; Provisional	94.25
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	94.24
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	94.21
PRK07206	416	hypothetical protein; Provisional	94.17
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	94.16
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.16
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.16
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.12
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	94.09
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.08
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.03
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	94.02
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	94.02
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	93.99
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.98
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	93.97
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.95
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	93.93
KOG1196|consensus	343		93.92
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	93.92

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.88  E-value=5.3e-22  Score=139.61  Aligned_cols=95  Identities=31%  Similarity=0.516  Sum_probs=84.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||||+|||+++|+.|+++|++|++++|+.+++                           .+..+++.... +.+
T Consensus         6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL---------------------------~~la~~l~~~~-~v~   57 (265)
T COG0300           6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKL---------------------------EALAKELEDKT-GVE   57 (265)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHH---------------------------HHHHHHHHHhh-Cce
Confidence            78999999999999999999999999999999999877                           23335555444 447


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +..+++|+++++++.++.+++....+.||+||||||+..+.++
T Consensus        58 v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f  100 (265)
T COG0300          58 VEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPF  100 (265)
T ss_pred             EEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccch
Confidence            8999999999999999999999999999999999999998875

>KOG1205|consensus

Probab=99.87  E-value=1.6e-21  Score=138.09  Aligned_cols=94  Identities=34%  Similarity=0.583  Sum_probs=79.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++||||++|||.++|.+|+++|++++++.|..+.++..                           .+++.+.....+
T Consensus        12 ~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v---------------------------~~~l~~~~~~~~   64 (282)
T KOG1205|consen   12 GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERV---------------------------AEELRKLGSLEK   64 (282)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHH---------------------------HHHHHHhCCcCc
Confidence            79999999999999999999999999999999987766322                           133332222226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++||++|.+++.++++++..++|++|+||||||+....
T Consensus        65 v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~  105 (282)
T KOG1205|consen   65 VLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVG  105 (282)
T ss_pred             cEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCcccccc
Confidence            99999999999999999999999999999999999998843

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.87  E-value=1.7e-21  Score=134.50  Aligned_cols=92  Identities=41%  Similarity=0.581  Sum_probs=81.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||.+++++|++.|++|++.+|+.+.+                               +.+..+.....
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL-------------------------------~~la~~~~~~~   54 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERL-------------------------------EALADEIGAGA   54 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHH-------------------------------HHHHHhhccCc
Confidence            68999999999999999999999999999999998766                               44544444347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++++..|++|++++..+++.+.++|+++|+||||||+...+|+
T Consensus        55 ~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~   97 (246)
T COG4221          55 ALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPL   97 (246)
T ss_pred             eEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChh
Confidence            8899999999999999999999999999999999999877654

>KOG1201|consensus

Probab=99.85  E-value=2e-20  Score=132.25  Aligned_cols=93  Identities=19%  Similarity=0.413  Sum_probs=80.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |+++|||||++|+|++++.+|+++|+.+++++.+.+..+                           +..+.....  + +
T Consensus        38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~---------------------------etv~~~~~~--g-~   87 (300)
T KOG1201|consen   38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNE---------------------------ETVKEIRKI--G-E   87 (300)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchH---------------------------HHHHHHHhc--C-c
Confidence            789999999999999999999999999999999987653                           222333222  2 8


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++++.||+++++++.++.+++++.+|.+|+||||||+...+++
T Consensus        88 ~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~l  130 (300)
T KOG1201|consen   88 AKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKL  130 (300)
T ss_pred             eeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCc
Confidence            9999999999999999999999999999999999999988765

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.82  E-value=1.2e-19  Score=122.42  Aligned_cols=89  Identities=29%  Similarity=0.552  Sum_probs=78.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |.++|||||++|||++++++|.+.|..|++++|+...+                               ++.....+  .
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L-------------------------------~e~~~~~p--~   51 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERL-------------------------------AEAKAENP--E   51 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHH-------------------------------HHHHhcCc--c
Confidence            78999999999999999999999999999999998766                               33333322  5


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++...||+.|.++++++++++++.++.+++||||||+.....
T Consensus        52 ~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~d   93 (245)
T COG3967          52 IHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNED   93 (245)
T ss_pred             hheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhh
Confidence            778899999999999999999999999999999999987654

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.3e-18  Score=122.45  Aligned_cols=95  Identities=27%  Similarity=0.439  Sum_probs=78.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.....+.+
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   60 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLA---------------------------SAEARLREKFPGAR   60 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH---------------------------HHHHHHHhhCCCce
Confidence            789999999999999999999999999999999876442                           11223333333347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+++|++|++++.++++++.+.++++|+||||||+....+
T Consensus        61 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~  102 (265)
T PRK07062         61 LLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVST  102 (265)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            888999999999999999999999999999999999876544

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1e-18  Score=126.33  Aligned_cols=93  Identities=33%  Similarity=0.352  Sum_probs=77.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+....++.+
T Consensus        14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~---------------------------~~~~~l~~~~~~~~   66 (313)
T PRK05854         14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGE---------------------------AAVAAIRTAVPDAK   66 (313)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHhCCCCc
Confidence            799999999999999999999999999999999876542                           22233333333346


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|.+++.++++++.++++++|+||||||+...
T Consensus        67 v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~  106 (313)
T PRK05854         67 LSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTP  106 (313)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccC
Confidence            8889999999999999999999999999999999998753

>KOG1208|consensus

Probab=99.79  E-value=1.7e-18  Score=125.12  Aligned_cols=94  Identities=32%  Similarity=0.422  Sum_probs=80.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+++|+.|+.+|++|++.+|+.+..                           .+..+.+........
T Consensus        35 ~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~---------------------------~~~~~~i~~~~~~~~   87 (314)
T KOG1208|consen   35 GKVALVTGATSGIGFETARELALRGAHVVLACRNEERG---------------------------EEAKEQIQKGKANQK   87 (314)
T ss_pred             CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHH---------------------------HHHHHHHHhcCCCCc
Confidence            68999999999999999999999999999999998544                           222344444444557


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.+.++|+++.++|+++++++..+.+++|+||||||++...
T Consensus        88 i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~  128 (314)
T KOG1208|consen   88 IRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPP  128 (314)
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCC
Confidence            88999999999999999999999999999999999998764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.78  E-value=7.3e-18  Score=117.48  Aligned_cols=96  Identities=33%  Similarity=0.515  Sum_probs=79.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||++++++|+++|++|++++|+.....                           .....+....++.
T Consensus         1 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~---------------------------~~~~~~~~~~~~~   53 (248)
T PRK08251          1 TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLE---------------------------ELKAELLARYPGI   53 (248)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHhhCCCc
Confidence            6899999999999999999999999999999999876441                           1112222223344


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|+++++++.++++++.+.++++|++|||||+....+
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   96 (248)
T PRK08251         54 KVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGAR   96 (248)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            7889999999999999999999999999999999999876543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=4.2e-18  Score=119.57  Aligned_cols=87  Identities=23%  Similarity=0.327  Sum_probs=72.6

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||++  +|||++++++|+++|++|++++|+.. .                           .+..+++.    .
T Consensus         7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~---------------------------~~~~~~~~----~   54 (252)
T PRK06079          7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR-M---------------------------KKSLQKLV----D   54 (252)
T ss_pred             CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH-H---------------------------HHHHHhhc----c
Confidence            7999999999  79999999999999999999998732 2                           01112221    1


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++++|++|++++.++++++.+++|++|+||||||+..
T Consensus        55 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~   95 (252)
T PRK06079         55 EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAK   95 (252)
T ss_pred             CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccc
Confidence            25778999999999999999999999999999999999875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.77  E-value=5.4e-18  Score=118.89  Aligned_cols=91  Identities=23%  Similarity=0.403  Sum_probs=74.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+....                             ..+.+.. . +.+
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~-----------------------------~~~~~~~-~-~~~   56 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPE-----------------------------TQAQVEA-L-GRK   56 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHH-----------------------------HHHHHHH-c-CCe
Confidence            79999999999999999999999999999998864311                             0011111 1 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++++.+.+|++|+||||||+....+
T Consensus        57 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~   98 (251)
T PRK12481         57 FHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQD   98 (251)
T ss_pred             EEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            788999999999999999999999999999999999876554

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9e-18  Score=119.40  Aligned_cols=93  Identities=28%  Similarity=0.394  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~---------------------------~~~~~l~~~--~~~   56 (275)
T PRK05876          6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLR---------------------------QAVNHLRAE--GFD   56 (275)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            789999999999999999999999999999999876441                           111223211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+.+|++|+||||||+....+
T Consensus        57 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~   98 (275)
T PRK05876         57 VHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGP   98 (275)
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            788999999999999999999999999999999999876544

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.3e-18  Score=117.88  Aligned_cols=94  Identities=39%  Similarity=0.546  Sum_probs=77.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.....+.+
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   59 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAE---------------------------RAAAAIARDVAGAR   59 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhccCCce
Confidence            689999999999999999999999999999999865441                           11122222122346


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|++|++++.++++++.+.++++|+||||||+..+.
T Consensus        60 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  100 (260)
T PRK07063         60 VLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFA  100 (260)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCC
Confidence            88899999999999999999999999999999999986543

>PRK08643 acetoin reductase; Validated

Probab=99.77  E-value=1.1e-17  Score=117.18  Aligned_cols=94  Identities=35%  Similarity=0.524  Sum_probs=77.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||+++++.|+++|++|++++|+.+...                           +....+...  +.
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~~~--~~   51 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQ---------------------------AAADKLSKD--GG   51 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            7899999999999999999999999999999999865431                           111222211  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|+++++++.++++++.++++++|++|||||+....+
T Consensus        52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   94 (256)
T PRK08643         52 KAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTP   94 (256)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            6778999999999999999999999999999999999876544

>KOG0725|consensus

Probab=99.77  E-value=9.4e-18  Score=119.26  Aligned_cols=94  Identities=33%  Similarity=0.494  Sum_probs=79.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh-cCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK-ENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   80 (125)
                      ||+++|||+++|||+++|++|++.|++|++++|+.+....                           ..+.+.. ...+.
T Consensus         8 gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~---------------------------~~~~~~~~~~~~~   60 (270)
T KOG0725|consen    8 GKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEE---------------------------TAQELGGLGYTGG   60 (270)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------------------------HHHHHHhcCCCCC
Confidence            8999999999999999999999999999999999876521                           1122221 12244


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhh-cCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNK-FGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id~lv~nag~~~~~  122 (125)
                      ++..+.||+++++++.++++...++ +|++|+||||||.....
T Consensus        61 ~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~  103 (270)
T KOG0725|consen   61 KVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLT  103 (270)
T ss_pred             eeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCC
Confidence            7899999999999999999999998 79999999999998865

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.5e-18  Score=117.48  Aligned_cols=93  Identities=30%  Similarity=0.474  Sum_probs=77.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+..+                           +..+.+...  +.+
T Consensus         9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   59 (253)
T PRK05867          9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALE---------------------------KLADEIGTS--GGK   59 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            789999999999999999999999999999999865441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        60 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~  101 (253)
T PRK05867         60 VVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTP  101 (253)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            788899999999999999999999999999999999876554

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.3e-17  Score=117.82  Aligned_cols=93  Identities=24%  Similarity=0.351  Sum_probs=75.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~-~~~   59 (263)
T PRK08339          8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLK---------------------------KAREKIKSES-NVD   59 (263)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhhc-CCc
Confidence            789999999999999999999999999999999865441                           1112222211 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++. ++|++|++|||+|+....+
T Consensus        60 ~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~~~~  100 (263)
T PRK08339         60 VSYIVADLTKREDLERTVKELK-NIGEPDIFFFSTGGPKPGY  100 (263)
T ss_pred             eEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCCCCCC
Confidence            7889999999999999999985 6899999999999866543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.76  E-value=1.9e-17  Score=116.13  Aligned_cols=96  Identities=23%  Similarity=0.336  Sum_probs=78.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|++||||++++||.++++.|+++|++|++++|+.....                           ...+.+.......
T Consensus         1 m~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~---------------------------~~~~~~~~~~~~~   53 (259)
T PRK12384          1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAA---------------------------NVAQEINAEYGEG   53 (259)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHHhcCCc
Confidence            7899999999999999999999999999999999865431                           1112222222223


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|+++++++.++++++.+.++++|++|||||.....+
T Consensus        54 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~   96 (259)
T PRK12384         54 MAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAF   96 (259)
T ss_pred             eeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            6889999999999999999999999999999999999876543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=1.6e-17  Score=117.06  Aligned_cols=91  Identities=22%  Similarity=0.265  Sum_probs=73.7

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||++  +|||+++++.|+++|++|++++|+....                            +..+++.....+
T Consensus         7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~----------------------------~~~~~~~~~~~~   58 (257)
T PRK08594          7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLE----------------------------KEVRELADTLEG   58 (257)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccch----------------------------HHHHHHHHHcCC
Confidence            7999999997  8999999999999999999998864211                            111222222222


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++++|++|++++.++++++.+++|++|+||||||+..
T Consensus        59 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~   99 (257)
T PRK08594         59 QESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFAN   99 (257)
T ss_pred             CceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCC
Confidence            36788999999999999999999999999999999999864

>KOG4169|consensus

Probab=99.76  E-value=6.6e-18  Score=115.51  Aligned_cols=95  Identities=37%  Similarity=0.464  Sum_probs=83.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||.+++||+.+|||+++.+.|++.|..+.++..+.+..                            +....+....+...
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~----------------------------~a~akL~ai~p~~~   56 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP----------------------------EAIAKLQAINPSVS   56 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH----------------------------HHHHHHhccCCCce
Confidence            89999999999999999999999999888887776643                            33466666666678


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.+++||+++..++++.++++...+|.+|++||+||+..++.+
T Consensus        57 v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~dkd~   99 (261)
T KOG4169|consen   57 VIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILDDKDW   99 (261)
T ss_pred             EEEEEeccccHHHHHHHHHHHHHHhCceEEEEcccccccchhH
Confidence            9999999999999999999999999999999999999987654

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.9e-17  Score=120.70  Aligned_cols=94  Identities=30%  Similarity=0.382  Sum_probs=77.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.. . +.+
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~---------------------------~~~~~~~~-~-g~~   57 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQ---------------------------AVAEECRA-L-GAE   57 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHh-c-CCc
Confidence            689999999999999999999999999999999876542                           11122222 1 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +..+.+|++|++++.++++++.+.++++|++|||||+..+.++
T Consensus        58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~  100 (330)
T PRK06139         58 VLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRF  100 (330)
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCc
Confidence            7788999999999999999999999999999999998776543

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.9e-17  Score=116.61  Aligned_cols=88  Identities=31%  Similarity=0.368  Sum_probs=74.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+..                               +.+.... +.+
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~-~~~   53 (261)
T PRK08265          6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNG-------------------------------AAVAASL-GER   53 (261)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHh-CCe
Confidence            68999999999999999999999999999999986543                               1111111 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|+++++++.++++.+.+.++++|+||||||+...
T Consensus        54 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~   93 (261)
T PRK08265         54 ARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLD   93 (261)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            7889999999999999999999999999999999998654

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.1e-17  Score=118.89  Aligned_cols=93  Identities=33%  Similarity=0.407  Sum_probs=76.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           ...+.+.....+.+
T Consensus        16 ~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   68 (306)
T PRK06197         16 GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGK---------------------------AAAARITAATPGAD   68 (306)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHhCCCCc
Confidence            789999999999999999999999999999999865441                           11122222222336


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|.+++.++++++.++++++|+||||||+...
T Consensus        69 ~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~  108 (306)
T PRK06197         69 VTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYT  108 (306)
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccC
Confidence            7889999999999999999999999999999999998643

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.2e-17  Score=115.97  Aligned_cols=91  Identities=29%  Similarity=0.370  Sum_probs=75.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+++++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.  ... 
T Consensus         1 ~~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~--~~~-   50 (257)
T PRK07024          1 MPLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQ---------------------------AFAARLP--KAA-   50 (257)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHhcc--cCC-
Confidence            6799999999999999999999999999999999865431                           1111111  112 


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++.++++|++|++++.++++++.++++++|+||||+|+...
T Consensus        51 ~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~   91 (257)
T PRK07024         51 RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVG   91 (257)
T ss_pred             eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCC
Confidence            67889999999999999999999999999999999998653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.4e-17  Score=117.76  Aligned_cols=102  Identities=25%  Similarity=0.298  Sum_probs=75.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++++.......                  .......+..+.+...  +.+
T Consensus         6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~------------------~~~~~~~~~~~~l~~~--~~~   65 (286)
T PRK07791          6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSA------------------SGGSAAQAVVDEIVAA--GGE   65 (286)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccc------------------cchhHHHHHHHHHHhc--CCc
Confidence            79999999999999999999999999999998865110000                  0000001112222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++.+.+.+|++|+||||||+....+
T Consensus        66 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~  107 (286)
T PRK07791         66 AVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRM  107 (286)
T ss_pred             eEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            778899999999999999999999999999999999876544

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=2.2e-17  Score=117.22  Aligned_cols=89  Identities=21%  Similarity=0.305  Sum_probs=72.0

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||+++  |||+++++.|+++|++|++++|+.....                            ..+.+....+ 
T Consensus         7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~----------------------------~~~~~~~~~g-   57 (271)
T PRK06505          7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK----------------------------RVKPLAESLG-   57 (271)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH----------------------------HHHHHHHhcC-
Confidence            79999999996  9999999999999999999998743221                            1122221111 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       ...++++|++|++++.++++++.+++|++|+||||||+..
T Consensus        58 -~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~   97 (271)
T PRK06505         58 -SDFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSD   97 (271)
T ss_pred             -CceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCC
Confidence             2346899999999999999999999999999999999865

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.75  E-value=2e-17  Score=108.93  Aligned_cols=93  Identities=32%  Similarity=0.513  Sum_probs=76.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC--chhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARR--AEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+++|||+++|||+++++.|+++|. .|+++.|+  .+..                           .+..+.+...  +
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~---------------------------~~l~~~l~~~--~   51 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGA---------------------------QELIQELKAP--G   51 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHH---------------------------HHHHHHHHHT--T
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccc---------------------------cccccccccc--c
Confidence            7899999999999999999999965 88888888  2222                           1222333322  2


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .++.++++|+++++++.++++++.++++++|++|||+|+....++
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~   96 (167)
T PF00106_consen   52 AKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSL   96 (167)
T ss_dssp             SEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSG
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            489999999999999999999999999999999999999986554

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06720 hypothetical protein; Provisional

Probab=99.75  E-value=4.3e-17  Score=108.69  Aligned_cols=92  Identities=24%  Similarity=0.349  Sum_probs=75.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|++.|++|++++|+.+...                           +..+.+...  +.+
T Consensus        16 gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~---------------------------~~~~~l~~~--~~~   66 (169)
T PRK06720         16 GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQ---------------------------ATVEEITNL--GGE   66 (169)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999998865331                           111222211  225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ..++++|+++.+++.++++++.+.+|++|++|||||+....
T Consensus        67 ~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~  107 (169)
T PRK06720         67 ALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKID  107 (169)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence            66789999999999999999999999999999999988754

>KOG1200|consensus

Probab=99.75  E-value=1.7e-17  Score=111.41  Aligned_cols=94  Identities=28%  Similarity=0.373  Sum_probs=78.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |.|+++|||+++|||++++..|++.|++|++.+++....+                           .....+.   ...
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~---------------------------ata~~L~---g~~   62 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAE---------------------------ATAGDLG---GYG   62 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHH---------------------------HHHhhcC---CCC
Confidence            4689999999999999999999999999999999876441                           1112221   112


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ....|.||+++.+++..++++..+.+|.+++||||||+..+..+
T Consensus        63 ~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~L  106 (256)
T KOG1200|consen   63 DHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLL  106 (256)
T ss_pred             ccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccce
Confidence            56789999999999999999999999999999999999987644

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.2e-17  Score=118.46  Aligned_cols=92  Identities=32%  Similarity=0.439  Sum_probs=76.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.   .+.+
T Consensus         9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~---------------------------~~~~~l~---~~~~   58 (296)
T PRK05872          9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELA---------------------------ALAAELG---GDDR   58 (296)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHhc---CCCc
Confidence            789999999999999999999999999999999876441                           1112221   1235


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+++|++|++++.++++++.+.++++|++|||||+....+
T Consensus        59 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~  100 (296)
T PRK05872         59 VLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGS  100 (296)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcC
Confidence            677889999999999999999999999999999999976544

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=2.9e-17  Score=116.89  Aligned_cols=89  Identities=16%  Similarity=0.241  Sum_probs=71.8

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||++  +|||+++++.|+++|++|++++|+.+..                            +..+.+......
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~----------------------------~~~~~~~~~~~~   56 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALK----------------------------KRVEPIAQELGS   56 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHH----------------------------HHHHHHHHhcCC
Confidence            7999999997  7999999999999999999999874311                            111222222222


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       . ..+++|++|++++.++++++.+++|++|+||||||+..
T Consensus        57 -~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~   95 (274)
T PRK08415         57 -D-YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAP   95 (274)
T ss_pred             -c-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCc
Confidence             3 56899999999999999999999999999999999864

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.9e-17  Score=114.36  Aligned_cols=90  Identities=31%  Similarity=0.458  Sum_probs=75.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           ...+.+...  +.+
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   56 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELD---------------------------QLVAEIRAE--GGE   56 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            589999999999999999999999999999999876442                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+++++++.++++++.++++++|+||||||+..
T Consensus        57 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~   95 (254)
T PRK07478         57 AVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLG   95 (254)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            788999999999999999999999999999999999864

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.8e-17  Score=113.40  Aligned_cols=90  Identities=22%  Similarity=0.276  Sum_probs=74.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~---------------------------~~~~~i~~~--~~~   55 (227)
T PRK08862          5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALK---------------------------DTYEQCSAL--TDN   55 (227)
T ss_pred             CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHH---------------------------HHHHHHHhc--CCC
Confidence            789999999999999999999999999999999876542                           112222221  235


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcC-CccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFG-HIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nag~~~  120 (125)
                      +..+++|+++++++.++++++.++++ ++|++|||||...
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~   95 (227)
T PRK08862         56 VYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSP   95 (227)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCC
Confidence            77889999999999999999999999 9999999998644

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.74  E-value=3.6e-17  Score=115.15  Aligned_cols=91  Identities=21%  Similarity=0.352  Sum_probs=73.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                          ....+.+.... +.+
T Consensus         8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~~~~~~~-~~~   60 (260)
T PRK08416          8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEA--------------------------NKIAEDLEQKY-GIK   60 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH--------------------------HHHHHHHHHhc-CCc
Confidence            799999999999999999999999999998876543210                          11112222211 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++++|++|++++.++++++.+.++++|+||||||+.
T Consensus        61 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~   98 (260)
T PRK08416         61 AKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIIS   98 (260)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECcccc
Confidence            88999999999999999999999999999999999875

>PRK08589 short chain dehydrogenase; Validated

Probab=99.74  E-value=4.8e-17  Score=115.29  Aligned_cols=89  Identities=36%  Similarity=0.572  Sum_probs=74.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+ +...                           +..+.+...  +.+
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~---------------------------~~~~~~~~~--~~~   55 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVS---------------------------ETVDKIKSN--GGK   55 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHH---------------------------HHHHHHHhc--CCe
Confidence            7899999999999999999999999999999998 4331                           112233221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +..+++|+++++++.++++++.+.+|++|+||||||+..
T Consensus        56 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~   94 (272)
T PRK08589         56 AKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDN   94 (272)
T ss_pred             EEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCC
Confidence            788999999999999999999999999999999999864

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=4.2e-17  Score=114.86  Aligned_cols=89  Identities=19%  Similarity=0.258  Sum_probs=72.0

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||++  +|||+++++.|+++|++|++++|+.+..+                            ..+.+..... 
T Consensus        10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~----------------------------~~~~~~~~~~-   60 (258)
T PRK07533         10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP----------------------------YVEPLAEELD-   60 (258)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH----------------------------HHHHHHHhhc-
Confidence            7999999998  59999999999999999999999754221                            0122221111 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       .+.++++|++|++++.++++.+.+++|++|+||||||+..
T Consensus        61 -~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~  100 (258)
T PRK07533         61 -APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAP  100 (258)
T ss_pred             -cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCC
Confidence             2457899999999999999999999999999999999864

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=4.6e-17  Score=115.18  Aligned_cols=90  Identities=20%  Similarity=0.264  Sum_probs=72.2

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||+++  |||+++++.|+++|++|++++|+.. .                           .+..+++....+ 
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~-~---------------------------~~~~~~~~~~~~-   56 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-L---------------------------KGRVEEFAAQLG-   56 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh-H---------------------------HHHHHHHHhccC-
Confidence            78999999986  9999999999999999999988732 1                           011122222221 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       .+..+.+|++|++++.++++.+.+++|++|+||||||+...
T Consensus        57 -~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~   97 (262)
T PRK07984         57 -SDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPG   97 (262)
T ss_pred             -CceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCc
Confidence             35678999999999999999999999999999999998643

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.1e-17  Score=118.55  Aligned_cols=93  Identities=32%  Similarity=0.499  Sum_probs=77.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~---------------------------~~~~~l~~~--g~~   58 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLE---------------------------ALAAEIRAA--GGE   58 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHHc--CCc
Confidence            689999999999999999999999999999999876441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++.+.+++|++|++|||||+..+.+
T Consensus        59 ~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~  100 (334)
T PRK07109         59 ALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGP  100 (334)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCc
Confidence            788999999999999999999999999999999999876554

>PRK06194 hypothetical protein; Provisional

Probab=99.73  E-value=6.4e-17  Score=115.07  Aligned_cols=93  Identities=28%  Similarity=0.407  Sum_probs=76.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++|||||++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   56 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALD---------------------------RAVAELRAQ--GAE   56 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHH---------------------------HHHHHHHhc--CCe
Confidence            589999999999999999999999999999999765431                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++.+.+.++++|+||||||.....+
T Consensus        57 ~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~   98 (287)
T PRK06194         57 VLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGL   98 (287)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            888999999999999999999999999999999999976543

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=4.5e-17  Score=114.93  Aligned_cols=90  Identities=21%  Similarity=0.282  Sum_probs=72.1

Q ss_pred             CcEEEEecC--CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++||||  ++|||+++++.|+++|++|++.+|+....                            +..+++..... 
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~----------------------------~~~~~~~~~~~-   56 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLE----------------------------ERVRKMAAELD-   56 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHH----------------------------HHHHHHHhccC-
Confidence            789999997  67999999999999999999988753211                            11123322222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       ....+++|++|++++.++++++.+++|++|+||||||+...
T Consensus        57 -~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~   97 (261)
T PRK08690         57 -SELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPK   97 (261)
T ss_pred             -CceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCc
Confidence             34578999999999999999999999999999999998753

>PRK12743 oxidoreductase; Provisional

Probab=99.73  E-value=9e-17  Score=112.80  Aligned_cols=94  Identities=27%  Similarity=0.344  Sum_probs=75.6

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||+++++.|+++|++|+++.++.....                          +...+.+.. . +.
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~--------------------------~~~~~~~~~-~-~~   52 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGA--------------------------KETAEEVRS-H-GV   52 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHH--------------------------HHHHHHHHh-c-CC
Confidence            7899999999999999999999999999998876543220                          111122221 1 23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++.+|+++++++.++++++.+.++++|+||||+|.....
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~   94 (256)
T PRK12743         53 RAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKA   94 (256)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            688899999999999999999999999999999999987644

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=4.8e-17  Score=114.51  Aligned_cols=89  Identities=21%  Similarity=0.345  Sum_probs=72.2

Q ss_pred             CcEEEEecC--CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||+  ++|||+++++.|+++|++|++++|+....                             ..+.+......
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~-----------------------------~~~~~~~~~~~   57 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALR-----------------------------LTERIAKRLPE   57 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchh-----------------------------HHHHHHHhcCC
Confidence            689999999  89999999999999999999999864211                             00112111222


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       ++.++++|++|++++.++++++.+++|++|+||||||+..
T Consensus        58 -~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~   97 (256)
T PRK07889         58 -PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAP   97 (256)
T ss_pred             -CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEcccccc
Confidence             5668899999999999999999999999999999999874

>PRK05599 hypothetical protein; Provisional

Probab=99.73  E-value=5.7e-17  Score=113.47  Aligned_cols=90  Identities=21%  Similarity=0.244  Sum_probs=73.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++|||+++|||++++++|+ +|++|++++|+.+...                           +..+.+... +...+
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~---------------------------~~~~~l~~~-~~~~~   51 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQ---------------------------GLASDLRQR-GATSV   51 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHH---------------------------HHHHHHHhc-cCCce
Confidence            478999999999999999999 5999999999876542                           112333222 22247


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .++++|++|++++.++++++.+.+|++|++|||||+...
T Consensus        52 ~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~   90 (246)
T PRK05599         52 HVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGD   90 (246)
T ss_pred             EEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCC
Confidence            788999999999999999999999999999999998754

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.73  E-value=6.6e-17  Score=116.97  Aligned_cols=91  Identities=23%  Similarity=0.270  Sum_probs=75.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+|+++|||+++|||+++++.|+++| ++|++++|+.+...                           +..+.+.  ..+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~---------------------------~~~~~l~--~~~   52 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAE---------------------------QAAKSLG--MPK   52 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHH---------------------------HHHHHhc--CCC
Confidence            78999999999999999999999999 99999999865441                           1112221  112


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++..+.+|+++.+++.++++++.++++++|+||||||+..
T Consensus        53 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~   93 (314)
T TIGR01289        53 DSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYF   93 (314)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccc
Confidence            36778899999999999999999988999999999999854

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.73  E-value=7.8e-17  Score=115.59  Aligned_cols=93  Identities=30%  Similarity=0.496  Sum_probs=76.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~---------------------------~~~~~l~~~--~~~   90 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLD---------------------------AVADRITRA--GGD   90 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999875441                           111222211  225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++.+.+.++++|++|||||+....+
T Consensus        91 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~  132 (293)
T PRK05866         91 AMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRP  132 (293)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcc
Confidence            778999999999999999999999999999999999876544

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.73  E-value=6e-17  Score=114.02  Aligned_cols=87  Identities=28%  Similarity=0.426  Sum_probs=73.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+..                               +.+.... +.+
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~~l~~~~-~~~   52 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL-------------------------------QELEAAH-GDA   52 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHhhc-CCc
Confidence            68999999999999999999999999999999986543                               2222111 225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +..+++|+++.+++.++++++.++++++|+||||||+..
T Consensus        53 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~   91 (262)
T TIGR03325        53 VVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWD   91 (262)
T ss_pred             eEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCc
Confidence            778899999999999999999999999999999999753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=7.4e-17  Score=114.57  Aligned_cols=89  Identities=20%  Similarity=0.316  Sum_probs=72.0

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||++  +|||+++++.|+++|++|++++|+....                            +..+.+..... 
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~----------------------------~~~~~l~~~~~-   60 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALK----------------------------KRVEPLAAELG-   60 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHH----------------------------HHHHHHHHhcC-
Confidence            7999999997  8999999999999999999998863211                            11122322222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       ....+++|++|++++.++++++.+++|++|+||||||+..
T Consensus        61 -~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~  100 (272)
T PRK08159         61 -AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSD  100 (272)
T ss_pred             -CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccC
Confidence             2456899999999999999999999999999999999875

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.73  E-value=6.2e-17  Score=114.48  Aligned_cols=89  Identities=36%  Similarity=0.443  Sum_probs=74.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||++++++|+++|++|++++|+.+...                               .+.....  +
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~-------------------------------~~~~~~~--~   51 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAK-------------------------------ETAAELG--L   51 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH-------------------------------HHHHHhc--c
Confidence            689999999999999999999999999999999876441                               1111111  4


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++.+.+.++++|++|||||+....+
T Consensus        52 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   93 (273)
T PRK07825         52 VVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGP   93 (273)
T ss_pred             ceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCc
Confidence            667899999999999999999999999999999999876554

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1e-16  Score=112.44  Aligned_cols=94  Identities=28%  Similarity=0.398  Sum_probs=76.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                          .+..+.+...  +.+
T Consensus         8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--------------------------~~~~~~l~~~--~~~   59 (254)
T PRK06114          8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGL--------------------------AETAEHIEAA--GRR   59 (254)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHH--------------------------HHHHHHHHhc--CCc
Confidence            789999999999999999999999999999999754210                          1111222222  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+.++++|+||||||+....+
T Consensus        60 ~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~  101 (254)
T PRK06114         60 AIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANP  101 (254)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            778899999999999999999999999999999999876543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.73  E-value=7.5e-17  Score=111.81  Aligned_cols=87  Identities=24%  Similarity=0.280  Sum_probs=73.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||+++++.|+++|++|++++|+.....                              +.+...    
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------------------------~~~~~~----   46 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI------------------------------DGLRQA----   46 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH------------------------------HHHHHc----
Confidence            7899999999999999999999999999999999764320                              111111    


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .+.++.+|++|++++.++++++.+.++++|++|||||+...
T Consensus        47 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~   87 (236)
T PRK06483         47 GAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLA   87 (236)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccC
Confidence            24678999999999999999999999999999999998643

>PRK06398 aldose dehydrogenase; Validated

Probab=99.73  E-value=5.8e-17  Score=114.08  Aligned_cols=83  Identities=35%  Similarity=0.695  Sum_probs=73.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+....                                        .+
T Consensus         6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------------------------------------~~   45 (258)
T PRK06398          6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------------------------------------ND   45 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------------------------------------Cc
Confidence            79999999999999999999999999999999875311                                        14


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.++++++|+||||||+....++
T Consensus        46 ~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~   88 (258)
T PRK06398         46 VDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAI   88 (258)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            6788999999999999999999999999999999998765443

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.72  E-value=8.5e-17  Score=113.36  Aligned_cols=92  Identities=24%  Similarity=0.277  Sum_probs=72.3

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||++  +|||++++++|+++|++|++.+|+.+..                         +..+..+.+....  
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~-------------------------~~~~~~~~~~~~~--   58 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKG-------------------------RFEKKVRELTEPL--   58 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccc-------------------------hHHHHHHHHHhcc--
Confidence            7999999986  8999999999999999999887754311                         0011123332221  


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++++|++|++++.++++++.+++|++|+||||||+..
T Consensus        59 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~   99 (258)
T PRK07370         59 NPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAG   99 (258)
T ss_pred             CcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccC
Confidence            14667899999999999999999999999999999999864

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=1.3e-16  Score=111.72  Aligned_cols=93  Identities=34%  Similarity=0.497  Sum_probs=76.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.....                           +..+.+...  +.+
T Consensus         9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~---------------------------~~~~~l~~~--~~~   59 (254)
T PRK08085          9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAE---------------------------LAVAKLRQE--GIK   59 (254)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            789999999999999999999999999999999865441                           111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+.+|++|++++.++++.+.+.++++|++|||+|.....+
T Consensus        60 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~  101 (254)
T PRK08085         60 AHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHP  101 (254)
T ss_pred             EEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCC
Confidence            778899999999999999999999999999999999875544

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.72  E-value=6.8e-17  Score=113.75  Aligned_cols=87  Identities=29%  Similarity=0.450  Sum_probs=73.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+..                               +.+..... .+
T Consensus         6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~-~~   53 (263)
T PRK06200          6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL-------------------------------ASLRQRFG-DH   53 (263)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHhC-Cc
Confidence            68999999999999999999999999999999986544                               11111111 25


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|+++++++.++++++.+.++++|+||||||+..
T Consensus        54 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~   92 (263)
T PRK06200         54 VLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWD   92 (263)
T ss_pred             ceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcc
Confidence            678899999999999999999999999999999999864

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.72  E-value=9.7e-17  Score=113.93  Aligned_cols=90  Identities=29%  Similarity=0.371  Sum_probs=75.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+.... +.+
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~-------------------------------~~l~~~~-~~~   51 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAAR-------------------------------ADFEALH-PDR   51 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHH-------------------------------HHHHhhc-CCC
Confidence            68999999999999999999999999999999986543                               2222222 225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+.+|++|++++.++++.+.+.++++|+||||||.....+
T Consensus        52 ~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~   93 (277)
T PRK06180         52 ALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGA   93 (277)
T ss_pred             eeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcc
Confidence            778899999999999999999999999999999999876543

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1e-16  Score=113.56  Aligned_cols=91  Identities=34%  Similarity=0.502  Sum_probs=76.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |.|++||||+++|||++++++|+++|++|+++.|+.+..                               +.+....+ .
T Consensus         1 m~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~-------------------------------~~~~~~~~-~   48 (276)
T PRK06482          1 MSKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL-------------------------------DDLKARYG-D   48 (276)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHhcc-C
Confidence            779999999999999999999999999999999986533                               22221112 2


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|++|++++.++++++.+.++++|+||||||.....+
T Consensus        49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   91 (276)
T PRK06482         49 RLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGA   91 (276)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcc
Confidence            5778899999999999999999999999999999999876543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=9.8e-17  Score=113.15  Aligned_cols=89  Identities=20%  Similarity=0.259  Sum_probs=71.2

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||+++  |||+++++.|+++|++|++.+|+....                            +..+++..... 
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~----------------------------~~~~~l~~~~g-   58 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLE----------------------------KRVKPLAEEIG-   58 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHH----------------------------HHHHHHHHhcC-
Confidence            78999999997  999999999999999999998873211                            11122322221 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       ...++++|++|++++.++++.+.+++|++|+||||||+..
T Consensus        59 -~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~   98 (260)
T PRK06603         59 -CNFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFAD   98 (260)
T ss_pred             -CceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCC
Confidence             2246789999999999999999999999999999999864

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.2e-16  Score=112.25  Aligned_cols=90  Identities=32%  Similarity=0.350  Sum_probs=74.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++|||+++|||++++++|+++|++|++++|+.+..                               +.+.....+.++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~~~~~   50 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGL-------------------------------AALAAELGAGNA   50 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-------------------------------HHHHHHhcCCce
Confidence            8999999999999999999999999999999987644                               112111123368


Q ss_pred             eEEEecCCChHHHHHHHHHHHhh-cCCccEEEeCcccCCCcC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNK-FGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~-~g~id~lv~nag~~~~~~  123 (125)
                      .++++|+++.+++.++++.+... ++++|+||||||+....+
T Consensus        51 ~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~   92 (260)
T PRK08267         51 WTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGP   92 (260)
T ss_pred             EEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCc
Confidence            88999999999999999998776 789999999999876543

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.1e-16  Score=115.60  Aligned_cols=98  Identities=21%  Similarity=0.265  Sum_probs=72.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|++.|++|++++|+..........                 ........+.+.. . +.+
T Consensus         8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~-----------------~~~~~~~~~~l~~-~-~~~   68 (305)
T PRK08303          8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDR-----------------PETIEETAELVTA-A-GGR   68 (305)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccc-----------------cchHHHHHHHHHh-c-CCc
Confidence            69999999999999999999999999999999974321000000                 0000111122221 1 235


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCc-cc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA-GV  118 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~na-g~  118 (125)
                      +.++++|++|++++.++++++.+++|++|+||||| |+
T Consensus        69 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~  106 (305)
T PRK08303         69 GIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGG  106 (305)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCccc
Confidence            77899999999999999999999999999999999 75

>PRK09242 tropinone reductase; Provisional

Probab=99.72  E-value=1.8e-16  Score=111.14  Aligned_cols=94  Identities=34%  Similarity=0.582  Sum_probs=77.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +....+....++.+
T Consensus         9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   61 (257)
T PRK09242          9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALA---------------------------QARDELAEEFPERE   61 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHhhCCCCe
Confidence            789999999999999999999999999999999865441                           11122222223347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++.+|+++++++.++++.+.+.++++|+||||+|.....
T Consensus        62 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~  102 (257)
T PRK09242         62 VHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRK  102 (257)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            88899999999999999999999999999999999986543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.71  E-value=2e-16  Score=111.58  Aligned_cols=93  Identities=33%  Similarity=0.480  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~---------------------------~~~~~~~~~--~~~   60 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVD---------------------------KGLAAYREL--GIE   60 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999998865441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|+++++++.++++++.++++++|+||||||+....+
T Consensus        61 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~  102 (265)
T PRK07097         61 AHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIP  102 (265)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCC
Confidence            888999999999999999999999999999999999977554

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.2e-16  Score=113.46  Aligned_cols=88  Identities=26%  Similarity=0.437  Sum_probs=73.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||+++++.|+++|++|++++|+.+..                               +.+...    
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~-------------------------------~~l~~~----   47 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV-------------------------------AALEAE----   47 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHC----
Confidence            478999999999999999999999999999999986544                               222211    


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhc-CCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~lv~nag~~~~~~  123 (125)
                      .+.++.+|++|++++.++++.+.+.+ +++|+||||||+....+
T Consensus        48 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~   91 (277)
T PRK05993         48 GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGA   91 (277)
T ss_pred             CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCC
Confidence            35678999999999999999997766 68999999999876654

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.5e-16  Score=112.74  Aligned_cols=91  Identities=33%  Similarity=0.494  Sum_probs=76.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||++++++|+++|++|++++|+.+..                               ..+..... .
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~-------------------------------~~~~~~~~-~   49 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATL-------------------------------ADLAEKYG-D   49 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHhcc-C
Confidence            478999999999999999999999999999999986544                               11111112 2


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|++|++++.++++.+.+.++++|++|||||+....+
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~   92 (275)
T PRK08263         50 RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGM   92 (275)
T ss_pred             CeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccc
Confidence            5778899999999999999999999999999999999886654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.71  E-value=1.5e-16  Score=111.84  Aligned_cols=87  Identities=25%  Similarity=0.363  Sum_probs=72.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+...   .++.
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~---~~~~   51 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLE---------------------------KALKELKEY---GEVY   51 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHhc---CCce
Confidence            6899999999999999999999999999999876441                           112222221   2577


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++++|++|++++.++++++.++++++|+||||||...
T Consensus        52 ~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~   88 (259)
T PRK08340         52 AVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVR   88 (259)
T ss_pred             EEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            8999999999999999999999999999999999854

>PRK05717 oxidoreductase; Validated

Probab=99.71  E-value=1.3e-16  Score=111.92  Aligned_cols=88  Identities=28%  Similarity=0.375  Sum_probs=73.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+....                               ..+.... +.+
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~-------------------------------~~~~~~~-~~~   57 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERG-------------------------------SKVAKAL-GEN   57 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHH-------------------------------HHHHHHc-CCc
Confidence            79999999999999999999999999999999876433                               1111111 125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|+++++++.++++++.++++++|++|||||+...
T Consensus        58 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~   97 (255)
T PRK05717         58 AWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADP   97 (255)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccC
Confidence            7788999999999999999999999999999999998753

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.1e-16  Score=110.61  Aligned_cols=91  Identities=31%  Similarity=0.495  Sum_probs=74.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+.....                           +..+.+...  +.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~---------------------------~~~~~~~~~--~~~   51 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLE---------------------------EAKLEIEQF--PGQ   51 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            589999999999999999999999999999999865431                           111222111  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|++++.++++++.+.++++|+||||+|....
T Consensus        52 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~   91 (252)
T PRK07677         52 VLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFI   91 (252)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCC
Confidence            8889999999999999999999999999999999997543

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.1e-16  Score=113.02  Aligned_cols=85  Identities=42%  Similarity=0.513  Sum_probs=73.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||++++++|+++|++|++++|+....                               ..      ...
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~-------------------------------~~------~~~   46 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA-------------------------------AP------IPG   46 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc-------------------------------cc------cCC
Confidence            57999999999999999999999999999999976432                               00      114


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++.+.+.++++|+||||||+....+
T Consensus        47 ~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~   88 (270)
T PRK06179         47 VELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGA   88 (270)
T ss_pred             CeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcC
Confidence            678899999999999999999999999999999999976544

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.71  E-value=2.2e-16  Score=110.86  Aligned_cols=92  Identities=32%  Similarity=0.444  Sum_probs=74.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+ +..+                           +..+.+. .. +.+
T Consensus        15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~---------------------------~~~~~~~-~~-~~~   64 (258)
T PRK06935         15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWD---------------------------ETRRLIE-KE-GRK   64 (258)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHH---------------------------HHHHHHH-hc-CCc
Confidence            7999999999999999999999999999999997 3221                           1011111 11 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|+++.+++.++++++.+.+|++|++|||+|.....+
T Consensus        65 ~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~  106 (258)
T PRK06935         65 VTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAP  106 (258)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876544

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.5e-16  Score=110.82  Aligned_cols=95  Identities=32%  Similarity=0.441  Sum_probs=76.1

Q ss_pred             CcEEEEecCCc-chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASV-GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~-giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++ |||+++++.|+++|++|++++|+.+...                           ...+.+....+..
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~---------------------------~~~~~~~~~~~~~   69 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLG---------------------------ETADELAAELGLG   69 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHHhcCCc
Confidence            68999999985 9999999999999999999998765441                           1112222212223


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|+++++++.++++.+.+.+|++|+||||||+....+
T Consensus        70 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~  112 (262)
T PRK07831         70 RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTP  112 (262)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            6788999999999999999999999999999999999865443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.71  E-value=1.7e-16  Score=111.35  Aligned_cols=90  Identities=28%  Similarity=0.395  Sum_probs=75.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                               .+..... .+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------------------------------~~~~~~~-~~   53 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARAR-------------------------------LAALEIG-PA   53 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH-------------------------------HHHHHhC-Cc
Confidence            589999999999999999999999999999999876441                               1111111 25


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+.++++|++|||||.....+
T Consensus        54 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   95 (257)
T PRK07067         54 AIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAP   95 (257)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            778899999999999999999999999999999999876544

>PLN02253 xanthoxin dehydrogenase

Probab=99.71  E-value=1.8e-16  Score=112.45  Aligned_cols=89  Identities=31%  Similarity=0.546  Sum_probs=74.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+.   ...+
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------------------------~~~~~~~---~~~~   67 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQ---------------------------NVCDSLG---GEPN   67 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHhc---CCCc
Confidence            789999999999999999999999999999998765331                           1112221   1236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|++++.++++.+.+.++++|+||||||...
T Consensus        68 ~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~  106 (280)
T PLN02253         68 VCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTG  106 (280)
T ss_pred             eEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCC
Confidence            788999999999999999999999999999999999864

>PRK09186 flagellin modification protein A; Provisional

Probab=99.71  E-value=1.9e-16  Score=110.77  Aligned_cols=91  Identities=29%  Similarity=0.410  Sum_probs=73.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+........
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   56 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALN---------------------------ELLESLGKEFKSKK   56 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHH---------------------------HHHHHHHhhcCCCc
Confidence            799999999999999999999999999999999865441                           11122222222224


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++++|++|++++.++++++.+.++++|++|||||..
T Consensus        57 ~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~   94 (256)
T PRK09186         57 LSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPR   94 (256)
T ss_pred             eeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccc
Confidence            66779999999999999999999999999999999754

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.4e-16  Score=111.06  Aligned_cols=92  Identities=28%  Similarity=0.426  Sum_probs=75.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+++++.|+++|++|++++|+.+..+                           .....+...  +.+
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~---------------------------~~~~~l~~~--~~~   60 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLD---------------------------EVAEQIRAA--GRR   60 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999865431                           111222111  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++.+|+++++++.++++++.+.++++|+||||||.....
T Consensus        61 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~  101 (263)
T PRK07814         61 AHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPN  101 (263)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            78899999999999999999999999999999999986544

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.71  E-value=1.8e-16  Score=111.12  Aligned_cols=91  Identities=27%  Similarity=0.448  Sum_probs=74.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||++++++|++.|++|++++++....                             ..+.+...  +.+
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~-----------------------------~~~~~~~~--~~~   58 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTE-----------------------------TIEQVTAL--GRR   58 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHH-----------------------------HHHHHHhc--CCe
Confidence            79999999999999999999999999999887753211                             11222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+++|++|++++.++++++.++++++|++|||||+..+.+
T Consensus        59 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~  100 (253)
T PRK08993         59 FLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRRED  100 (253)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876543

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.9e-16  Score=110.23  Aligned_cols=90  Identities=28%  Similarity=0.393  Sum_probs=75.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+.... +.+
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~-------------------------------~~~~~~~-~~~   53 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASL-------------------------------EAARAEL-GES   53 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHH-------------------------------HHHHHHh-CCc
Confidence            68999999999999999999999999999999975433                               1111111 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|.+++.++++.+.+.++++|++|||||...+.+
T Consensus        54 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   95 (249)
T PRK06500         54 ALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAP   95 (249)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            778899999999999999999999999999999999876544

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.71  E-value=2.6e-16  Score=110.23  Aligned_cols=93  Identities=32%  Similarity=0.486  Sum_probs=76.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           ...+.+...  +.+
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~i~~~--~~~   60 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLA---------------------------AAAESLKGQ--GLS   60 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--Cce
Confidence            789999999999999999999999999999999865441                           111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++.+.+.++++|+||||+|.....+
T Consensus        61 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~  102 (255)
T PRK07523         61 AHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTP  102 (255)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            888999999999999999999999999999999999876544

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=2.5e-16  Score=113.56  Aligned_cols=93  Identities=26%  Similarity=0.350  Sum_probs=74.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++.+++.....                          +...+.+...  +.+
T Consensus        12 ~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~--------------------------~~~~~~i~~~--g~~   63 (306)
T PRK07792         12 GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDA--------------------------SDVLDEIRAA--GAK   63 (306)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHH--------------------------HHHHHHHHhc--CCe
Confidence            799999999999999999999999999999987543110                          1111222221  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++.+.+ +|++|+||||||+....+
T Consensus        64 ~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~  104 (306)
T PRK07792         64 AVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRM  104 (306)
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCCC
Confidence            88899999999999999999998 999999999999976543

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3e-16  Score=109.86  Aligned_cols=90  Identities=26%  Similarity=0.413  Sum_probs=74.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+....+                           +....+...  +.+
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   55 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLD---------------------------EVAAEIDDL--GRR   55 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHHh--CCc
Confidence            789999999999999999999999999999999865431                           111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++++.++++++|++|||||...
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~   94 (258)
T PRK07890         56 ALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVP   94 (258)
T ss_pred             eEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCC
Confidence            788999999999999999999999999999999999854

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.70  E-value=2.5e-16  Score=110.35  Aligned_cols=91  Identities=30%  Similarity=0.443  Sum_probs=75.9

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||+++++.|+++|++|++++|+.+...                           .....+    .+.
T Consensus         1 ~~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~---------------------------~~~~~~----~~~   49 (257)
T PRK07074          1 TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALA---------------------------AFADAL----GDA   49 (257)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHh----cCC
Confidence            7899999999999999999999999999999999865431                           111111    123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++..+++|+.|++++.++++++.++++++|++|||+|.....
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~   91 (257)
T PRK07074         50 RFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAA   91 (257)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            678899999999999999999999999999999999987643

>PRK06182 short chain dehydrogenase; Validated

Probab=99.70  E-value=2e-16  Score=111.97  Aligned_cols=87  Identities=45%  Similarity=0.647  Sum_probs=74.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+...    .
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-------------------------------~~~~~~----~   47 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-------------------------------EDLASL----G   47 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHhC----C
Confidence            68999999999999999999999999999999986544                               222111    3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+.++++|+||||||+....+
T Consensus        48 ~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   89 (273)
T PRK06182         48 VHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGA   89 (273)
T ss_pred             CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCc
Confidence            667899999999999999999999999999999999876544

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.3e-16  Score=108.82  Aligned_cols=93  Identities=27%  Similarity=0.413  Sum_probs=76.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||+.++++|+++|++|++++|+.+...                           ...+.+...  +.+
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   56 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALE---------------------------ALAAELRST--GVK   56 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhC--CCc
Confidence            589999999999999999999999999999999875431                           111222111  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++.+.++++++|+||||+|.....+
T Consensus        57 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~   98 (241)
T PRK07454         57 AAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGP   98 (241)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCc
Confidence            788999999999999999999999999999999999876543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.70  E-value=2.7e-16  Score=113.94  Aligned_cols=90  Identities=23%  Similarity=0.284  Sum_probs=73.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           ...+.+..  ...+
T Consensus         6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~--~~~~   56 (322)
T PRK07453          6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAE---------------------------AAAQELGI--PPDS   56 (322)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHhhc--cCCc
Confidence            789999999999999999999999999999999866441                           11122211  1236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|.+++.++++++.+..+++|+||||||+..
T Consensus        57 ~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~   95 (322)
T PRK07453         57 YTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYM   95 (322)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccC
Confidence            788899999999999999998888889999999999764

>PRK06196 oxidoreductase; Provisional

Probab=99.70  E-value=1.5e-16  Score=114.96  Aligned_cols=86  Identities=33%  Similarity=0.421  Sum_probs=72.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+    .  .
T Consensus        26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~---------------------------~~~~~l----~--~   72 (315)
T PRK06196         26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAR---------------------------EALAGI----D--G   72 (315)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHh----h--h
Confidence            689999999999999999999999999999999865441                           111111    1  2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|.+++.++++++.+.++++|+||||||+..
T Consensus        73 v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~  111 (315)
T PRK06196         73 VEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMA  111 (315)
T ss_pred             CeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCC
Confidence            667899999999999999999999999999999999864

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.70  E-value=4.1e-16  Score=109.30  Aligned_cols=93  Identities=31%  Similarity=0.471  Sum_probs=76.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||+++++.|+++|++|++++|+++...                           +..+.+...  +.+
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   57 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGAN---------------------------AVADEINKA--GGK   57 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHH---------------------------HHHHHHHhc--Cce
Confidence            689999999999999999999999999999999875441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++.+...++++|+||||+|.....+
T Consensus        58 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~   99 (262)
T PRK13394         58 AIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNP   99 (262)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCc
Confidence            788999999999999999999999999999999999876543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.70  E-value=2.9e-16  Score=109.40  Aligned_cols=90  Identities=30%  Similarity=0.468  Sum_probs=74.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||.+++++|+++|++|++++|+....                             ..+.+.. . +.+
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~-----------------------------~~~~~~~-~-~~~   53 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSE-----------------------------TQQQVEA-L-GRR   53 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHH-----------------------------HHHHHHh-c-CCc
Confidence            79999999999999999999999999999999865211                             0011111 1 225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +..+++|+++++++.++++++.+.++++|++|||||+....
T Consensus        54 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~   94 (248)
T TIGR01832        54 FLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRA   94 (248)
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            78899999999999999999999999999999999987654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.6e-16  Score=108.47  Aligned_cols=91  Identities=30%  Similarity=0.470  Sum_probs=75.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||.++++.|+++|++|++++|+.+...                           .....+.   .+.+
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~---~~~~   54 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAE---------------------------RVAAAIA---AGGR   54 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHH---------------------------HHHHHHh---cCCe
Confidence            689999999999999999999999999999999865431                           1111121   1336


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|++|++++.++++.+.++++++|+||||+|...+.
T Consensus        55 ~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~   95 (252)
T PRK06138         55 AFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGG   95 (252)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            88899999999999999999999999999999999987643

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.69  E-value=5.1e-16  Score=110.17  Aligned_cols=100  Identities=27%  Similarity=0.308  Sum_probs=76.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||.++++.|+++|++|++++|+.+........                    ..+..+.+.. . +.+
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--------------------l~~~~~~~~~-~-~~~   63 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGT--------------------IHTAAEEIEA-A-GGQ   63 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhH--------------------HHHHHHHHHh-c-CCc
Confidence            68999999999999999999999999999999976432100000                    0111122221 1 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|+++++++.++++.+.+.++++|+||||||+....+
T Consensus        64 ~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~  105 (273)
T PRK08278         64 ALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTG  105 (273)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCC
Confidence            888999999999999999999999999999999999876544

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.3e-16  Score=110.48  Aligned_cols=94  Identities=31%  Similarity=0.434  Sum_probs=75.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|+|.++++.|+++|++|++++|+.+....                           ..+.......+.
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~~~   54 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQEN---------------------------LLSQATQLNLQQ   54 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHH---------------------------HHHHHHhcCCCC
Confidence            37899999999999999999999999999999998654411                           111111111123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++.+|++|++++.+ ++++.+.++++|++|||+|.....
T Consensus        55 ~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~   95 (280)
T PRK06914         55 NIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGG   95 (280)
T ss_pred             ceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccC
Confidence            68889999999999999 999999999999999999987654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.69  E-value=3.1e-16  Score=109.77  Aligned_cols=85  Identities=34%  Similarity=0.493  Sum_probs=73.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+..                                    . .+..
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~------------------------------------~-~~~~   48 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET------------------------------------V-DGRP   48 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh------------------------------------h-cCCc
Confidence            79999999999999999999999999999999975410                                    0 1225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|+++++++.++++.+.+.++++|++|||||+....+
T Consensus        49 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   90 (252)
T PRK07856         49 AEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYAL   90 (252)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            778899999999999999999999999999999999865443

>PRK06484 short chain dehydrogenase; Validated

Probab=99.69  E-value=2.2e-16  Score=120.65  Aligned_cols=87  Identities=33%  Similarity=0.554  Sum_probs=73.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+..                               +.+..... .+
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~-~~  316 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGA-------------------------------KKLAEALG-DE  316 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHhC-Cc
Confidence            68999999999999999999999999999999986544                               11211112 25


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +..+.+|++|++++.++++++.+++|++|+||||||+..
T Consensus       317 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~  355 (520)
T PRK06484        317 HLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAE  355 (520)
T ss_pred             eeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcC
Confidence            677899999999999999999999999999999999864

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.69  E-value=5.4e-16  Score=108.43  Aligned_cols=91  Identities=31%  Similarity=0.400  Sum_probs=75.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||.+++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   57 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGE---------------------------ETVALIREA--GGE   57 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999876441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|+++++++.++++++.+.++++|++|||+|+...
T Consensus        58 ~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~   97 (253)
T PRK06172         58 ALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIE   97 (253)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            7889999999999999999999999999999999998643

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.4e-16  Score=108.50  Aligned_cols=95  Identities=26%  Similarity=0.353  Sum_probs=74.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||+++++.|+++|++|+++.++.....                          ....+.+...  +.
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~--------------------------~~~~~~~~~~--~~   59 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEA--------------------------EALAAEIRAL--GR   59 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH--------------------------HHHHHHHHhc--CC
Confidence            3789999999999999999999999999988776532110                          0111222111  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|.+++.++++++.+.++++|+||||||.....+
T Consensus        60 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~  102 (258)
T PRK09134         60 RAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDS  102 (258)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCc
Confidence            6788999999999999999999999999999999999876543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.69  E-value=5.3e-16  Score=108.87  Aligned_cols=88  Identities=32%  Similarity=0.425  Sum_probs=72.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+....                            +..+.+...  +.+
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~----------------------------~~~~~~~~~--~~~   57 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVH----------------------------EVAAELRAA--GGE   57 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHH----------------------------HHHHHHHhc--CCe
Confidence            68999999999999999999999999999999974311                            111222111  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|+++++++.++++++.+.++++|+||||||..
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~   95 (260)
T PRK12823         58 ALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGT   95 (260)
T ss_pred             EEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccc
Confidence            77899999999999999999999999999999999965

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.69  E-value=6.2e-16  Score=107.77  Aligned_cols=92  Identities=34%  Similarity=0.471  Sum_probs=73.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeec-CchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFAR-RAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+|+++|||+++|||..+++.|+++|++|+++.+ +.+...                           .....+...  +
T Consensus         1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~---------------------------~~~~~~~~~--~   51 (248)
T PRK06947          1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAE---------------------------ETADAVRAA--G   51 (248)
T ss_pred             CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHH---------------------------HHHHHHHhc--C
Confidence            7899999999999999999999999999987654 333221                           111222211  2


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .++.+++||+++++++.++++++.+.++++|+||||||....
T Consensus        52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~   93 (248)
T PRK06947         52 GRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAP   93 (248)
T ss_pred             CcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCC
Confidence            368899999999999999999999999999999999998643

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.1e-16  Score=109.23  Aligned_cols=93  Identities=32%  Similarity=0.423  Sum_probs=75.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||.++++.|+++|++|++++|+.+...                           ...+.+...  +.+
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   59 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVD---------------------------AAVAQLQQA--GPE   59 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHh--CCc
Confidence            689999999999999999999999999999999865431                           111222221  125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|+++++++.++++.+.+.++++|++|||||.....+
T Consensus        60 ~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~  101 (264)
T PRK07576         60 GLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAP  101 (264)
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence            678899999999999999999999999999999998765443

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=6.2e-16  Score=108.31  Aligned_cols=93  Identities=29%  Similarity=0.539  Sum_probs=76.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||+++++.|+++|++|++++|+.+...                           .....+...  +.+
T Consensus        11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   61 (256)
T PRK06124         11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLE---------------------------AAVAALRAA--GGA   61 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            799999999999999999999999999999999865431                           111222221  225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++.+...++++|++|||+|.....+
T Consensus        62 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~  103 (256)
T PRK06124         62 AEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRP  103 (256)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876544

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.6e-16  Score=110.17  Aligned_cols=86  Identities=34%  Similarity=0.567  Sum_probs=72.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++||||++|||+++++.|+++|++|++++|+.+..                               +.+...    .+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~----~~   46 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV-------------------------------EALAAA----GF   46 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHC----CC
Confidence            8999999999999999999999999999999986533                               111111    35


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .++.+|+++++++.++++.+.+.++++|++|||||.....+
T Consensus        47 ~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   87 (274)
T PRK05693         47 TAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGP   87 (274)
T ss_pred             eEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            67899999999999999999999999999999999876543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=7.7e-16  Score=107.32  Aligned_cols=93  Identities=32%  Similarity=0.515  Sum_probs=74.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEE-eecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIG-FARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++|||+++|||+++++.|+++|++|++ ..|+.....                           +..+.+...  +.
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~---------------------------~~~~~~~~~--~~   54 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAE---------------------------ETAEEIEAL--GR   54 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            689999999999999999999999999876 466654331                           111222221  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|++++.++++++.+.++++|+||||+|.....|
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   97 (250)
T PRK08063         55 KALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRP   97 (250)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            6888999999999999999999999999999999999876554

>KOG1014|consensus

Probab=99.68  E-value=3.7e-16  Score=111.15  Aligned_cols=92  Identities=29%  Similarity=0.478  Sum_probs=72.5

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++++|||++.|||++.+++||++|++|++++|+.++++                           ...++++.... .
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~---------------------------~v~kEI~~~~~-v   99 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLE---------------------------AVAKEIEEKYK-V   99 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHHHhC-c
Confidence            3789999999999999999999999999999999999883                           22344544444 5


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcC--CccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFG--HIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id~lv~nag~~~~~~  123 (125)
                      +++.+.+|.++.+.+.   +.+.+...  .+-+||||+|..++.|
T Consensus       100 ev~~i~~Dft~~~~~y---e~i~~~l~~~~VgILVNNvG~~~~~P  141 (312)
T KOG1014|consen  100 EVRIIAIDFTKGDEVY---EKLLEKLAGLDVGILVNNVGMSYDYP  141 (312)
T ss_pred             EEEEEEEecCCCchhH---HHHHHHhcCCceEEEEecccccCCCc
Confidence            8999999999888743   33333333  4668999999999654

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.68  E-value=7.3e-16  Score=108.06  Aligned_cols=90  Identities=38%  Similarity=0.520  Sum_probs=74.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||++++++|+++|++|++++|+.+..                            +..+.+...  +.+
T Consensus         7 ~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~----------------------------~~~~~~~~~--~~~   56 (258)
T PRK08628          7 DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD----------------------------EFAEELRAL--QPR   56 (258)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH----------------------------HHHHHHHhc--CCc
Confidence            78999999999999999999999999999999986532                            111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|+++++++.++++++.+.++++|++|||||....
T Consensus        57 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~   96 (258)
T PRK08628         57 AEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDG   96 (258)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCC
Confidence            7889999999999999999999999999999999997654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=5.5e-16  Score=108.66  Aligned_cols=88  Identities=31%  Similarity=0.524  Sum_probs=72.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|+++.++.+..                              .+.+...    .
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~------------------------------~~~l~~~----~   52 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE------------------------------AKELREK----G   52 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH------------------------------HHHHHhC----C
Confidence            69999999999999999999999999999887754322                              0122111    3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+.++++|+||||||+....+
T Consensus        53 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   94 (255)
T PRK06463         53 VFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMP   94 (255)
T ss_pred             CeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            567899999999999999999999999999999999876544

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=9e-16  Score=107.31  Aligned_cols=92  Identities=30%  Similarity=0.355  Sum_probs=74.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |.|+++|||+++|||.++++.|+++|++|++++|+.....                          .+..+.+...  ..
T Consensus         1 ~~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~--------------------------~~~~~~~~~~--~~   52 (256)
T PRK12745          1 MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEEL--------------------------AATQQELRAL--GV   52 (256)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHH--------------------------HHHHHHHHhc--CC
Confidence            6799999999999999999999999999999998753220                          1111222211  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|+++++++.++++.+.+.++++|++|||+|+..
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   92 (256)
T PRK12745         53 EVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGV   92 (256)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            6788999999999999999999999999999999999864

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=4.5e-16  Score=109.81  Aligned_cols=89  Identities=19%  Similarity=0.253  Sum_probs=70.0

Q ss_pred             CcEEEEecC--CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||+  ++|||++++++|+++|++|++++|.....                            +..+.+..... 
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~----------------------------~~~~~~~~~~~-   56 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK----------------------------DRITEFAAEFG-   56 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHH----------------------------HHHHHHHHhcC-
Confidence            789999996  67999999999999999999987642211                            11122222211 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       ....+++|++|++++.++++.+.+++|++|+||||||+..
T Consensus        57 -~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~   96 (260)
T PRK06997         57 -SDLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAP   96 (260)
T ss_pred             -CcceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCC
Confidence             2246899999999999999999999999999999999864

>PRK06128 oxidoreductase; Provisional

Probab=99.68  E-value=8.3e-16  Score=110.45  Aligned_cols=92  Identities=26%  Similarity=0.339  Sum_probs=73.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|+++.++......                         .+..+.+...  +.+
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~-------------------------~~~~~~~~~~--~~~  107 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDA-------------------------AEVVQLIQAE--GRK  107 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHH-------------------------HHHHHHHHHc--CCe
Confidence            6899999999999999999999999999998876432100                         0111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|+++++++.++++++.+.++++|+||||||+..
T Consensus       108 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~  146 (300)
T PRK06128        108 AVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQT  146 (300)
T ss_pred             EEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccC
Confidence            788999999999999999999999999999999999853

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.68  E-value=8.1e-16  Score=109.05  Aligned_cols=90  Identities=28%  Similarity=0.410  Sum_probs=74.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           .....+.. . +.+
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~-~-~~~   60 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAE---------------------------AVVAEIKA-A-GGE   60 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHh-c-CCe
Confidence            689999999999999999999999999999999865431                           11122221 1 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|+++++++.++++++.++++++|++|||||+..
T Consensus        61 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~   99 (278)
T PRK08277         61 ALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNH   99 (278)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            888999999999999999999999999999999999754

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.68  E-value=8.8e-16  Score=107.91  Aligned_cols=92  Identities=30%  Similarity=0.478  Sum_probs=75.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+....                            ...+.+...  +.+
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~----------------------------~~~~~~~~~--~~~   55 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIE----------------------------KLADELCGR--GHR   55 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH----------------------------HHHHHHHHh--CCc
Confidence            68999999999999999999999999999999975321                            111222111  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++++.+.++++|++|||||+....+
T Consensus        56 ~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~   97 (263)
T PRK08226         56 CTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGS   97 (263)
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            778999999999999999999999999999999999876544

>PRK06484 short chain dehydrogenase; Validated

Probab=99.68  E-value=4e-16  Score=119.26  Aligned_cols=86  Identities=38%  Similarity=0.599  Sum_probs=73.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+..                               +.+.... +.+
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~-~~~   52 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERA-------------------------------RERADSL-GPD   52 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHh-CCc
Confidence            79999999999999999999999999999999986644                               1111111 225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++++|+++++++.++++++.++++++|+||||||+.
T Consensus        53 ~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~   90 (520)
T PRK06484         53 HHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVT   90 (520)
T ss_pred             eeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcC
Confidence            67899999999999999999999999999999999984

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.68  E-value=6.7e-16  Score=109.75  Aligned_cols=88  Identities=26%  Similarity=0.425  Sum_probs=70.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+ +|||+++++.|+ +|++|++++|+.+...                           +..+.+...  +.
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~---------------------------~~~~~l~~~--~~   49 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLE---------------------------AAAKTLREA--GF   49 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            8899999998 699999999996 7999999999865431                           111222211  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++++|++|++++.++++++ ++++++|+||||||+..
T Consensus        50 ~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~~   88 (275)
T PRK06940         50 DVSTQEVDVSSRESVKALAATA-QTLGPVTGLVHTAGVSP   88 (275)
T ss_pred             eEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEECCCcCC
Confidence            6788999999999999999988 56899999999999863

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.2e-15  Score=105.96  Aligned_cols=94  Identities=37%  Similarity=0.523  Sum_probs=75.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+++++.|+++|++++++.++.+...                          ....+.+...  +.+
T Consensus         5 ~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~--------------------------~~~~~~~~~~--~~~   56 (245)
T PRK12937          5 NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAA--------------------------DELVAEIEAA--GGR   56 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHH--------------------------HHHHHHHHhc--CCe
Confidence            789999999999999999999999999988887654220                          1111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++++.+.++++|++|||||+....+
T Consensus        57 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   98 (245)
T PRK12937         57 AIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGT   98 (245)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            889999999999999999999999999999999999875433

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.68  E-value=1.3e-15  Score=107.16  Aligned_cols=94  Identities=31%  Similarity=0.479  Sum_probs=75.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|+++.|+.+...                          ....+.+...  +.+
T Consensus         7 ~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~--------------------------~~~~~~l~~~--~~~   58 (261)
T PRK08936          7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEA--------------------------NDVAEEIKKA--GGE   58 (261)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHH--------------------------HHHHHHHHHc--CCe
Confidence            799999999999999999999999999999888654221                          1111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|.+++.++++.+.+.++++|++|||||.....+
T Consensus        59 ~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~  100 (261)
T PRK08936         59 AIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVP  100 (261)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            778999999999999999999999999999999999876544

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.68  E-value=1.2e-15  Score=106.07  Aligned_cols=94  Identities=30%  Similarity=0.411  Sum_probs=77.5

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++++|.++++.|+++|++|++++|+.....                           ...+.+...  +.
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~   55 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAA---------------------------ATAELVEAA--GG   55 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            3789999999999999999999999999999999865431                           112333222  22


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|++++.++++.+.++++.+|++|||+|...+.+
T Consensus        56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~   98 (251)
T PRK12826         56 KARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTP   98 (251)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            5788999999999999999999999999999999999887643

>PRK09135 pteridine reductase; Provisional

Probab=99.68  E-value=1.3e-15  Score=105.83  Aligned_cols=94  Identities=24%  Similarity=0.288  Sum_probs=74.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++++||++++++|+++|++|++++|+.....                          +.....+... ....
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~--------------------------~~~~~~~~~~-~~~~   58 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEA--------------------------DALAAELNAL-RPGS   58 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH--------------------------HHHHHHHHhh-cCCc
Confidence            589999999999999999999999999999998743221                          0111112111 1225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++.+|++|++++.++++.+.++++++|++|||||.....
T Consensus        59 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~   99 (249)
T PRK09135         59 AAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPT   99 (249)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            77889999999999999999999999999999999986544

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.68  E-value=9e-16  Score=108.38  Aligned_cols=92  Identities=25%  Similarity=0.304  Sum_probs=68.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch-hhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|||+++|||+++++.|+++|++|++++|+.. ..                           ....+.+.... +.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~---------------------------~~~~~~l~~~~-~~~   53 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAA---------------------------STLAAELNARR-PNS   53 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHH---------------------------HHHHHHHHhcc-CCc
Confidence            68999999999999999999999999999876532 22                           11112222211 225


Q ss_pred             eeEEEecCCChHHH----HHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEV----VEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v----~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +..+.+|++|++++    .++++.+.+.++++|+||||||+....
T Consensus        54 ~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~   98 (267)
T TIGR02685        54 AVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPT   98 (267)
T ss_pred             eEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCC
Confidence            67789999999865    556666667889999999999986543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.3e-15  Score=106.07  Aligned_cols=93  Identities=30%  Similarity=0.482  Sum_probs=73.4

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+++++|||+++|||.+++++|+++|++|++..++.+...                          ......+...  +.
T Consensus         1 ~~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~--------------------------~~~~~~l~~~--~~   52 (248)
T PRK06123          1 MRKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAA--------------------------EAVVQAIRRQ--GG   52 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHH--------------------------HHHHHHHHhC--CC
Confidence            7899999999999999999999999999988775432110                          1111222211  22


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++.++++|++|.+++.++++.+.+.++++|+||||||....
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~   93 (248)
T PRK06123         53 EALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEA   93 (248)
T ss_pred             cEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            57789999999999999999999999999999999998753

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.1e-15  Score=106.90  Aligned_cols=89  Identities=34%  Similarity=0.516  Sum_probs=74.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||.+++++|+++|++|++++|+.+...                           ...+.+...  +.+
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~---------------------------~~~~~~~~~--~~~   58 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQ---------------------------AVADAIVAA--GGK   58 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            789999999999999999999999999999999865441                           111222221  225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +..+++|+++.+++.++++++.+.++++|+||||||..
T Consensus        59 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~   96 (252)
T PRK07035         59 AEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAAN   96 (252)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            77889999999999999999999999999999999975

>PRK05855 short chain dehydrogenase; Validated

Probab=99.67  E-value=8.4e-16  Score=118.09  Aligned_cols=93  Identities=26%  Similarity=0.439  Sum_probs=77.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++||||++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus       315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~~~--~~~  365 (582)
T PRK05855        315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAE---------------------------RTAELIRAA--GAV  365 (582)
T ss_pred             CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            578999999999999999999999999999999876441                           111222211  226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+.+|++|+||||||+....+
T Consensus       366 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~  407 (582)
T PRK05855        366 AHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGG  407 (582)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCC
Confidence            788999999999999999999999999999999999976554

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.3e-15  Score=106.24  Aligned_cols=90  Identities=30%  Similarity=0.397  Sum_probs=74.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.....                           ...+.+...  ..+
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~---------------------------~~~~~~~~~--~~~   56 (250)
T PRK07774          6 DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAE---------------------------RVAKQIVAD--GGT   56 (250)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999865331                           111222211  125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +..+.+|+++++++.++++++.+.++++|+||||||+..
T Consensus        57 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   95 (250)
T PRK07774         57 AIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYG   95 (250)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcC
Confidence            678899999999999999999999999999999999864

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.3e-15  Score=107.60  Aligned_cols=92  Identities=25%  Similarity=0.300  Sum_probs=75.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||+++|||+++++.|+++|++|++++|+.+...                           .....+...  +.++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~~   51 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGE---------------------------ETLKLLREA--GGDG   51 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCce
Confidence            47899999999999999999999999999999876441                           112222222  2367


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .++++|+++++++.++++.+...++++|+||||||.....+
T Consensus        52 ~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~   92 (270)
T PRK05650         52 FYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGF   92 (270)
T ss_pred             EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            78999999999999999999999999999999999876543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.67  E-value=8.2e-16  Score=108.32  Aligned_cols=82  Identities=38%  Similarity=0.475  Sum_probs=72.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++++....                                      ...+
T Consensus         9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~--------------------------------------~~~~   50 (266)
T PRK06171          9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG--------------------------------------QHEN   50 (266)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc--------------------------------------ccCc
Confidence            78999999999999999999999999999999876432                                      0115


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|++++.++++.+.+.++++|+||||||+...
T Consensus        51 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~   90 (266)
T PRK06171         51 YQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIP   90 (266)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCC
Confidence            6788999999999999999999999999999999998643

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.1e-15  Score=106.85  Aligned_cols=90  Identities=34%  Similarity=0.525  Sum_probs=74.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||.++++.|+++|++|++++|+.....                            .....    ....
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~----------------------------~~~~~----~~~~   62 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAE----------------------------VAAQL----LGGN   62 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------------------HHHHh----hCCc
Confidence            689999999999999999999999999999999764220                            01111    1225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+++|+++++++.++++++.+.++++|++|||+|+....+
T Consensus        63 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~  104 (255)
T PRK06841         63 AKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAP  104 (255)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            668899999999999999999999999999999999876544

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.67  E-value=1.9e-15  Score=104.83  Aligned_cols=94  Identities=34%  Similarity=0.453  Sum_probs=75.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |.|+++|||++++||+++++.|+++|++|++++|+....  .                        ........  ..+.
T Consensus         1 ~~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~--~------------------------~~~~~~~~--~~~~   52 (245)
T PRK12824          1 MKKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDC--A------------------------KDWFEEYG--FTED   52 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHH--H------------------------HHHHHHhh--ccCC
Confidence            568999999999999999999999999999999985411  0                        00001111  1123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++++|+++++++.++++.+..+++++|++|||+|.....
T Consensus        53 ~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~   94 (245)
T PRK12824         53 QVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDS   94 (245)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            688899999999999999999999999999999999987654

>TIGR02415 23BDH acetoin reductases

Probab=99.67  E-value=1.6e-15  Score=105.95  Aligned_cols=92  Identities=36%  Similarity=0.512  Sum_probs=75.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++|||++++||+++++.|+++|++|++++|+.+...                           +..+.+...  +.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~l~~~--~~~~   51 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAK---------------------------ETAKEINQA--GGKA   51 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCeE
Confidence            68999999999999999999999999999999855331                           111222221  3368


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .++.+|++|++++.++++++.++++++|+||||+|.....+
T Consensus        52 ~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~   92 (254)
T TIGR02415        52 VAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITP   92 (254)
T ss_pred             EEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            88999999999999999999999999999999999876544

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.67  E-value=1.8e-15  Score=106.08  Aligned_cols=93  Identities=27%  Similarity=0.456  Sum_probs=75.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|+++++++|+.+....                           ....+...  +.+
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~---------------------------~~~~l~~~--~~~   61 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANH---------------------------VVDEIQQL--GGQ   61 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH---------------------------HHHHHHhc--CCc
Confidence            7899999999999999999999999999999987654411                           11222211  226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++.+.+.++++|++|||||...+.+
T Consensus        62 ~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~  103 (255)
T PRK06113         62 AFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKP  103 (255)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            778899999999999999999999999999999999866543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.67  E-value=1.6e-15  Score=106.44  Aligned_cols=92  Identities=32%  Similarity=0.453  Sum_probs=75.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||.++++.|+++|++|++++|+.+..+                           ...+.+..  .+.+
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~i~~--~~~~   62 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELE---------------------------EAAAHLEA--LGID   62 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHh--cCCe
Confidence            689999999999999999999999999999999865431                           11111211  1236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|++|++++.++++++.+.++++|++|||||.....
T Consensus        63 ~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~  103 (259)
T PRK08213         63 ALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGA  103 (259)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence            77899999999999999999999999999999999986543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.66  E-value=1.9e-15  Score=105.64  Aligned_cols=93  Identities=33%  Similarity=0.533  Sum_probs=76.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||++++++|+++|++|++++|+.+...                           +..+.+..  .+.+
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~---------------------------~~~~~~~~--~~~~   54 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAA---------------------------AAAEALQK--AGGK   54 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH---------------------------HHHHHHHh--cCCc
Confidence            689999999999999999999999999999999876441                           11122221  1236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+.+|+++++++.++++.+.+.++.+|++|||||.....+
T Consensus        55 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   96 (258)
T PRK12429         55 AIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAP   96 (258)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            888999999999999999999999999999999999876543

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2e-15  Score=105.02  Aligned_cols=92  Identities=32%  Similarity=0.404  Sum_probs=75.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||.++++.|+++|++|++++|+.+...                           .....+...  +.+
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   57 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEAR---------------------------ELAAALEAA--GGR   57 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999998865441                           111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|++|++++.++++++.+.++++|++|||+|.....
T Consensus        58 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   98 (250)
T PRK12939         58 AHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSK   98 (250)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            88899999999999999999999999999999999987654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.66  E-value=1.5e-15  Score=105.41  Aligned_cols=89  Identities=30%  Similarity=0.389  Sum_probs=74.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+++++.|+++|+.|++.+|+.+..                               +.+.... +.+
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~-------------------------------~~~~~~~-~~~   53 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKL-------------------------------EALAAEL-GER   53 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH-------------------------------HHHHHHh-CCc
Confidence            68999999999999999999999999998888876544                               1111111 125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++.+|+++.+++.++++++.+.++++|++|||||...+.
T Consensus        54 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   94 (245)
T PRK12936         54 VKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDG   94 (245)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            77889999999999999999999999999999999987654

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.6e-15  Score=106.45  Aligned_cols=97  Identities=26%  Similarity=0.396  Sum_probs=73.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||.++++.|+++|++|+++.++......                       ..+...+.+...  +.+
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~-----------------------~~~~~~~~l~~~--~~~   62 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKA-----------------------DAEETVAAVKAA--GAK   62 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchH-----------------------HHHHHHHHHHHh--CCc
Confidence            5899999999999999999999999997777664321100                       001111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|+++++++.++++++.++++++|++|||||.....+
T Consensus        63 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~  104 (257)
T PRK12744         63 AVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKP  104 (257)
T ss_pred             EEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCC
Confidence            788999999999999999999999999999999999865443

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1.7e-15  Score=107.26  Aligned_cols=93  Identities=26%  Similarity=0.314  Sum_probs=73.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++|||+++|||+++++.|+++|++|++++|+.+..+                           +..+.+.... ...+
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~---------------------------~~~~~~~~~~-~~~~   52 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLA---------------------------QTVADARALG-GTVP   52 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhcC-CCcc
Confidence            57999999999999999999999999999999865431                           1112222211 2134


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .++++|+++++++.++++++.+.++++|+||||+|.....+
T Consensus        53 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~   93 (272)
T PRK07832         53 EHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGT   93 (272)
T ss_pred             eEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCc
Confidence            56789999999999999999999999999999999865433

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=1.9e-15  Score=105.17  Aligned_cols=89  Identities=33%  Similarity=0.533  Sum_probs=74.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++++||.++++.|+++|++|++++|+.....                           .....+..   +.+
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~---~~~   54 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAE---------------------------RVAAEILA---GGR   54 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHhc---CCe
Confidence            689999999999999999999999999999999876441                           11122221   236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++++..+++++|++|||+|...
T Consensus        55 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~   93 (251)
T PRK07231         55 AIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTH   93 (251)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            788999999999999999999999999999999999854

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=2.2e-15  Score=105.66  Aligned_cols=105  Identities=26%  Similarity=0.332  Sum_probs=75.5

Q ss_pred             CCcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           1 MSKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         1 ~~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      |+|+++|||+++  |||.++++.|+++|++|++++|++.+.....             +..   ..........+. .. 
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~-------------~~~---~~~~~~~~~~~~-~~-   65 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPW-------------GMH---DKEPVLLKEEIE-SY-   65 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCcccccccc-------------ccc---hhhHHHHHHHHH-hc-
Confidence            478999999984  8999999999999999999999732110000             000   000000112221 11 


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.++++|+++++++.++++.+.+.++++|+||||||+....+
T Consensus        66 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~  110 (256)
T PRK12748         66 GVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTR  110 (256)
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCC
Confidence            236889999999999999999999999999999999999876544

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.66  E-value=1.4e-15  Score=119.74  Aligned_cols=95  Identities=29%  Similarity=0.448  Sum_probs=76.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           ...+.+........
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~---------------------------~~~~~l~~~~~~~~  466 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAE---------------------------AVAAEINGQFGAGR  466 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHH---------------------------HHHHHHHhhcCCCc
Confidence            789999999999999999999999999999999865431                           11122221122225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+++|++|++++.++++++.+.+|++|+||||||+....+
T Consensus       467 ~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~  508 (676)
T TIGR02632       467 AVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSP  508 (676)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCC
Confidence            678899999999999999999999999999999999876544

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.8e-15  Score=104.92  Aligned_cols=92  Identities=33%  Similarity=0.498  Sum_probs=75.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           .....+...  ..+
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~---------------------------~~~~~l~~~--~~~   59 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLK---------------------------ELRAEIEAE--GGA   59 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            789999999999999999999999999999999876441                           111222111  225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +..+.+|+++++++.++++++.+.++++|++|||+|.....
T Consensus        60 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~  100 (258)
T PRK06949         60 AHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQ  100 (258)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence            78899999999999999999999999999999999986543

>PRK07985 oxidoreductase; Provisional

Probab=99.66  E-value=2e-15  Score=108.30  Aligned_cols=91  Identities=25%  Similarity=0.247  Sum_probs=72.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++.+|+.....                          .+......... +.+
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~--------------------------~~~~~~~~~~~-~~~  101 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEED--------------------------AQDVKKIIEEC-GRK  101 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhh--------------------------HHHHHHHHHHc-CCe
Confidence            689999999999999999999999999999887543110                          00111111111 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|++|++++.++++++.+.++++|++|||||..
T Consensus       102 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~  139 (294)
T PRK07985        102 AVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQ  139 (294)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            77899999999999999999999999999999999975

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.66  E-value=2.3e-15  Score=104.74  Aligned_cols=91  Identities=25%  Similarity=0.361  Sum_probs=71.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC-chhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR-AEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||+++++.|+++|++|++..+. ....                           .+....+...  +.
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~---------------------------~~~~~~~~~~--~~   53 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRR---------------------------VKWLEDQKAL--GF   53 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHH---------------------------HHHHHHHHhc--CC
Confidence            6899999999999999999999999998885443 2211                           1111222211  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++..+.+|++|.+++.++++++.+.++++|+||||||....
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~   94 (246)
T PRK12938         54 DFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRD   94 (246)
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            67788999999999999999999999999999999998654

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.66  E-value=8.5e-16  Score=110.88  Aligned_cols=102  Identities=19%  Similarity=0.236  Sum_probs=68.1

Q ss_pred             CcEEEEecC--CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||++||||+  ++|||+++|+.|++.|++|++ +|+...++....-....          .      .............
T Consensus         9 gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~----------~------~~~~~~~~~~~~~   71 (303)
T PLN02730          9 GKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRG----------K------FDESRKLPDGSLM   71 (303)
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhcc----------c------cchhhhccccccc
Confidence            899999999  799999999999999999998 67655442221111000          0      0000000000000


Q ss_pred             ceeeEEEecC--CC------------------hHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDV--TK------------------DAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv--~~------------------~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .....+++|+  ++                  ++++.++++++.+++|++|+||||||+..
T Consensus        72 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~  132 (303)
T PLN02730         72 EITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGP  132 (303)
T ss_pred             CcCeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccc
Confidence            1245678888  33                  44899999999999999999999998643

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.66  E-value=2.9e-15  Score=103.97  Aligned_cols=92  Identities=36%  Similarity=0.514  Sum_probs=75.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||++++++|+++|++|++++|+.....                           ...+.+.. . +.+
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~---------------------------~~~~~~~~-~-~~~   57 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLK---------------------------AVAEEVEA-Y-GVK   57 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHH-h-CCe
Confidence            579999999999999999999999999999999865431                           11122221 1 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++.+|+++++++.++++.+.++++++|++|||+|.....
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   98 (239)
T PRK07666         58 VVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFG   98 (239)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCC
Confidence            88899999999999999999999999999999999986543

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.4e-15  Score=106.77  Aligned_cols=81  Identities=25%  Similarity=0.307  Sum_probs=71.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+..                                     . ...
T Consensus         9 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-------------------------------------~-~~~   50 (260)
T PRK06523          9 GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-------------------------------------L-PEG   50 (260)
T ss_pred             CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-------------------------------------c-CCc
Confidence            78999999999999999999999999999999975411                                     0 115


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|++++.++++++.+.++++|+||||||...
T Consensus        51 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   89 (260)
T PRK06523         51 VEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSS   89 (260)
T ss_pred             eeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccc
Confidence            678899999999999999999999999999999999753

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.4e-15  Score=103.31  Aligned_cols=92  Identities=41%  Similarity=0.576  Sum_probs=76.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++++||.+++++|+++|++|++++|++....                           +..+.+...   .+
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~---------------------------~~~~~l~~~---~~   55 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELE---------------------------EAAAELNNK---GN   55 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHH---------------------------HHHHHHhcc---Cc
Confidence            589999999999999999999999999999999865431                           111222221   26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++++.+.++++|++|||+|.....+
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~   97 (237)
T PRK07326         56 VLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAP   97 (237)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence            788999999999999999999999999999999999876543

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.3e-15  Score=105.13  Aligned_cols=91  Identities=35%  Similarity=0.491  Sum_probs=74.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+++++.|+++|++|++++|+.+...                           .....+  .. +.+
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~--~~-~~~   54 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLE---------------------------ALAARL--PY-PGR   54 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHH--hc-CCc
Confidence            689999999999999999999999999999999865441                           111222  11 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++.+.+ ++++|+||||||.....+
T Consensus        55 ~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~~~~   95 (263)
T PRK09072         55 HRWVVADLTSEAGREAVLARARE-MGGINVLINNAGVNHFAL   95 (263)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCCccc
Confidence            78899999999999999998876 789999999999876543

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.4e-15  Score=105.66  Aligned_cols=92  Identities=24%  Similarity=0.334  Sum_probs=74.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||.++++.|+++|++|++++|+.+...                           ...+.+.......+
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   59 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLA---------------------------AAAEEIEALKGAGA   59 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH---------------------------HHHHHHHhccCCCc
Confidence            689999999999999999999999999999999865431                           11122221111236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|++++.++++++.++++++|++|||+|...
T Consensus        60 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~   98 (276)
T PRK05875         60 VRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSE   98 (276)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccc
Confidence            788899999999999999999999999999999999753

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.6e-15  Score=104.84  Aligned_cols=93  Identities=28%  Similarity=0.465  Sum_probs=76.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+++++.|+++|++|++++|+.....                           ...+.+...  +.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~---------------------------~~~~~l~~~--~~~   51 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLA---------------------------SLAQELADH--GGE   51 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            478999999999999999999999999999999865431                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++.+.++++++|++|||+|.....+
T Consensus        52 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   93 (263)
T PRK06181         52 ALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSR   93 (263)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccc
Confidence            788899999999999999999999999999999999876543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3e-15  Score=105.29  Aligned_cols=91  Identities=19%  Similarity=0.158  Sum_probs=72.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchh-hhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEM-IDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +++++||||++|||++++++|+++| ++|++++|+.+. .                           +...+++... ..
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~---------------------------~~~~~~l~~~-~~   59 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRR---------------------------DAAVAQMKAA-GA   59 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhH---------------------------HHHHHHHHhc-CC
Confidence            6799999999999999999999985 999999998764 3                           1112333222 22


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .++.++++|++|++++.++++++.+ .+++|++|||+|+...
T Consensus        60 ~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~  100 (253)
T PRK07904         60 SSVEVIDFDALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLGD  100 (253)
T ss_pred             CceEEEEecCCChHHHHHHHHHHHh-cCCCCEEEEeeecCCc
Confidence            2678899999999999999999886 5899999999998643

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.64  E-value=1.7e-15  Score=110.02  Aligned_cols=90  Identities=26%  Similarity=0.428  Sum_probs=65.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |++++||||++|||++++++|+++|++|++++|+.+..+                           +..+++....++.+
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~---------------------------~~~~~l~~~~~~~~  105 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLK---------------------------DVSDSIQSKYSKTQ  105 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHH---------------------------HHHHHHHHHCCCcE
Confidence            789999999999999999999999999999999876552                           12233333333346


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCC--ccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGH--IDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~--id~lv~nag~~~  120 (125)
                      +..+.+|+++  ++.+.++++.+.+++  +|+||||||+..
T Consensus       106 ~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~  144 (320)
T PLN02780        106 IKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSY  144 (320)
T ss_pred             EEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCC
Confidence            7888999985  223334444444444  669999999875

>PRK07069 short chain dehydrogenase; Validated

Probab=99.64  E-value=4.3e-15  Score=103.50  Aligned_cols=92  Identities=27%  Similarity=0.392  Sum_probs=72.1

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecC-chhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARR-AEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      ++|||+++|||+++++.|+++|++|++++|+ .+...                           ...+.+........+.
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~---------------------------~~~~~~~~~~~~~~~~   54 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLD---------------------------AFAAEINAAHGEGVAF   54 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHH---------------------------HHHHHHHhcCCCceEE
Confidence            7999999999999999999999999999997 33221                           1111121111222456


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .+++|++|++++.++++++.+.++++|++|||||.....+
T Consensus        55 ~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   94 (251)
T PRK07069         55 AAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGA   94 (251)
T ss_pred             EEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCC
Confidence            6889999999999999999999999999999999876543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.64  E-value=5.4e-15  Score=102.98  Aligned_cols=92  Identities=30%  Similarity=0.490  Sum_probs=73.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc-hhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA-EMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||.+++++|+++|++|++..++. ...                           ++..+.+..  .+.
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~---------------------------~~~~~~l~~--~~~   56 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAA---------------------------ENLVNELGK--EGH   56 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHH---------------------------HHHHHHHHh--cCC
Confidence            68999999999999999999999999998765533 222                           111122221  123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++++|+++++++.++++++.+.++++|++|||||.....
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   98 (247)
T PRK12935         57 DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDR   98 (247)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            688999999999999999999999999999999999987654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.64  E-value=5e-15  Score=103.15  Aligned_cols=92  Identities=28%  Similarity=0.447  Sum_probs=75.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++++||.+++++|+++|++|++++|+.....                           +..+.+...  +.+
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   53 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAE---------------------------KVAADIRAK--GGN   53 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999865431                           111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|+++++++.++++.+.+.++++|++|||+|.....
T Consensus        54 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~   94 (250)
T TIGR03206        54 AQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFG   94 (250)
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            78899999999999999999999999999999999986543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>KOG1199|consensus

Probab=99.64  E-value=1.4e-15  Score=100.70  Aligned_cols=87  Identities=31%  Similarity=0.388  Sum_probs=75.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |-+++|||+.+|+|++.+++|+++|+.+++.+...++-                               .+..++..+ +
T Consensus         9 glvalvtggasglg~ataerlakqgasv~lldlp~skg-------------------------------~~vakelg~-~   56 (260)
T KOG1199|consen    9 GLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKG-------------------------------ADVAKELGG-K   56 (260)
T ss_pred             CeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc-------------------------------hHHHHHhCC-c
Confidence            66899999999999999999999999999999876644                               233333333 7


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.+.+.|+++++++...+...+.+||++|.+|||||+..
T Consensus        57 ~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~   95 (260)
T KOG1199|consen   57 VVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAY   95 (260)
T ss_pred             eEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceee
Confidence            889999999999999999999999999999999999865

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.64  E-value=5.1e-15  Score=106.05  Aligned_cols=91  Identities=23%  Similarity=0.309  Sum_probs=73.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||.+++++|+++|++|++++|+.....                          ......+..  .+.+
T Consensus        46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~--------------------------~~~~~~~~~--~~~~   97 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDA--------------------------NETKQRVEK--EGVK   97 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHH--------------------------HHHHHHHHh--cCCe
Confidence            689999999999999999999999999999999753210                          011111211  1236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+++.+++.++++++.+.++++|+||||||...
T Consensus        98 ~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~  136 (290)
T PRK06701         98 CLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQY  136 (290)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccC
Confidence            788999999999999999999999999999999999864

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.64  E-value=5.7e-15  Score=102.50  Aligned_cols=93  Identities=35%  Similarity=0.579  Sum_probs=75.5

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+|+++|||++++||..+++.|+++|++|+++ .|+.....                           ...+.+..  .+
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~---------------------------~~~~~~~~--~~   54 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQ---------------------------ELLEEIKE--EG   54 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHH---------------------------HHHHHHHh--cC
Confidence            47899999999999999999999999999998 88765331                           11122221  12


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      .++.++.+|+++++++.++++.+.+.++++|++|||+|.....
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   97 (247)
T PRK05565         55 GDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFG   97 (247)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCC
Confidence            3678899999999999999999999999999999999987543

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.5e-15  Score=104.58  Aligned_cols=85  Identities=34%  Similarity=0.447  Sum_probs=71.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||.+++++|+++|++|++++|+....                               +.......   
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~-------------------------------~~~~~~~~---   52 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAG-------------------------------KAAADEVG---   52 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-------------------------------HHHHHHcC---
Confidence            78999999999999999999999999999999976533                               11111111   


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..++++|+++++++.++++++.+.++++|++|||||...
T Consensus        53 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~   91 (255)
T PRK06057         53 GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISP   91 (255)
T ss_pred             CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            146789999999999999999999999999999999864

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.64  E-value=7.8e-15  Score=102.22  Aligned_cols=91  Identities=25%  Similarity=0.371  Sum_probs=72.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                          ......+...  +.+
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~--------------------------~~~~~~l~~~--~~~   57 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRA--------------------------NKVVAEIEAA--GGR   57 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhH--------------------------HHHHHHHHhc--CCc
Confidence            689999999999999999999999999999998753210                          0111222211  235


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +..+++|+++++++.++++++.++++.+|++|||||...
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~   96 (248)
T PRK07806         58 ASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGM   96 (248)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCC
Confidence            778999999999999999999999999999999998753

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.64  E-value=6.4e-15  Score=103.02  Aligned_cols=92  Identities=32%  Similarity=0.419  Sum_probs=69.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec-CchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR-RAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||+++++.|++.|++|++..+ +.+...                           +....+...  +.
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~---------------------------~~~~~~~~~--~~   54 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAE---------------------------ETVYEIQSN--GG   54 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            799999999999999999999999999998754 333221                           111222221  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhh----cC--CccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNK----FG--HIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~----~g--~id~lv~nag~~~~~  122 (125)
                      ++..+.+|+++.+++..+++.+.+.    ++  ++|+||||||+....
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~  102 (252)
T PRK12747         55 SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGA  102 (252)
T ss_pred             ceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCC
Confidence            5778899999999999999888653    34  899999999986543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.63  E-value=4.5e-15  Score=104.12  Aligned_cols=87  Identities=36%  Similarity=0.491  Sum_probs=73.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++++||+.++++|+++|++|++++|+.+..                               +.+.......+
T Consensus        11 ~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~-------------------------------~~~~~~~~~~~   59 (264)
T PRK12829         11 GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAAL-------------------------------AATAARLPGAK   59 (264)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHHhcCc
Confidence            78999999999999999999999999999999976533                               11111111115


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +..+.+|++|++++.++++++.+.++++|++|||+|..
T Consensus        60 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~   97 (264)
T PRK12829         60 VTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIA   97 (264)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            67889999999999999999999999999999999987

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.63  E-value=3.8e-15  Score=104.09  Aligned_cols=86  Identities=33%  Similarity=0.519  Sum_probs=71.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||+++|||.++++.|+++|++|++++|+.+..                               +.+....+ .++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~-~~~   48 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-------------------------------QELKDELG-DNL   48 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHhc-cce
Confidence            3689999999999999999999999999999986543                               11111111 257


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|.+++.++++.+.+.++++|++|||||+..
T Consensus        49 ~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~   86 (248)
T PRK10538         49 YIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLAL   86 (248)
T ss_pred             EEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccC
Confidence            78899999999999999999999999999999999753

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.63  E-value=6.3e-15  Score=103.52  Aligned_cols=91  Identities=29%  Similarity=0.376  Sum_probs=71.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~-~~~   58 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALE---------------------------ALAADLRAAH-GVD   58 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHHHhhc-CCc
Confidence            689999999999999999999999999999999865441                           1112222222 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|+++++++.++++.    ++++|++|||+|+..+.++
T Consensus        59 ~~~~~~D~~~~~~~~~~~~~----~g~id~lv~~ag~~~~~~~   97 (259)
T PRK06125         59 VAVHALDLSSPEAREQLAAE----AGDIDILVNNAGAIPGGGL   97 (259)
T ss_pred             eEEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCCc
Confidence            77899999999999888764    5899999999998765443

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.63  E-value=7.1e-15  Score=104.27  Aligned_cols=92  Identities=33%  Similarity=0.433  Sum_probs=74.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.....                           +....+...  +.+
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   60 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCE---------------------------ELVDKIRAD--GGE   60 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            479999999999999999999999999999998754331                           111112111  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|+++++++.++++++.+.++++|++|||||.....
T Consensus        61 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~  101 (274)
T PRK07775         61 AVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFG  101 (274)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCc
Confidence            78889999999999999999999999999999999986543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.63  E-value=7.6e-15  Score=101.67  Aligned_cols=91  Identities=29%  Similarity=0.400  Sum_probs=72.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecC-chhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARR-AEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |+++|||+++|||+.+++.|+++|++++++.|+ .+...                           +.......  .+.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~---------------------------~~~~~~~~--~~~~   51 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAE---------------------------AWLQEQGA--LGFD   51 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHH---------------------------HHHHHHHh--hCCc
Confidence            689999999999999999999999999998883 22221                           11111111  1236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++.+|++|++++.++++.+.+.++++|++|||+|...+.
T Consensus        52 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   92 (242)
T TIGR01829        52 FRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDA   92 (242)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC
Confidence            88899999999999999999999999999999999987543

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.63  E-value=3.9e-15  Score=102.74  Aligned_cols=89  Identities=26%  Similarity=0.421  Sum_probs=73.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||+++++.|+++|++|++++|+..+..                           +..+.+...    .
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~~~----~   55 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLS---------------------------QTLPGVPAD----A   55 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHH---------------------------HHHHHHhhc----C
Confidence            689999999999999999999999999999999875431                           111222211    3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +..+.+|+.|.+++.++++.+.+.++++|++||++|...+
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~   95 (239)
T PRK12828         56 LRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVW   95 (239)
T ss_pred             ceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCc
Confidence            4567899999999999999999999999999999997654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.63  E-value=6.4e-15  Score=103.47  Aligned_cols=90  Identities=26%  Similarity=0.349  Sum_probs=71.1

Q ss_pred             EEEEecCCcchHHHHHHHHHH----cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           4 IIVVTGASVGIGAAILRALAA----KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +++|||+++|||++++++|++    +|++|++++|+.+...                           ...+.+.....+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~~   54 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALR---------------------------QLKAEIGAERSG   54 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHH---------------------------HHHHHHHhcCCC
Confidence            689999999999999999997    7999999999866441                           111223222223


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCc----cEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHI----DVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i----d~lv~nag~~~  120 (125)
                      .++.++++|+++++++.++++.+.+.++.+    |+||||||+..
T Consensus        55 ~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~   99 (256)
T TIGR01500        55 LRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLG   99 (256)
T ss_pred             ceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccC
Confidence            468889999999999999999998887653    69999999754

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN00015 protochlorophyllide reductase

Probab=99.63  E-value=3.5e-15  Score=107.66  Aligned_cols=86  Identities=26%  Similarity=0.305  Sum_probs=70.2

Q ss_pred             EEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           6 VVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         6 lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      ||||+++|||+++++.|+++| ++|++++|+.+...                           .....+.  ....++.+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~---------------------------~~~~~l~--~~~~~~~~   51 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAE---------------------------RAAKSAG--MPKDSYTV   51 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHH---------------------------HHHHHhc--CCCCeEEE
Confidence            699999999999999999999 99999999865441                           1112221  11236778


Q ss_pred             EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          85 LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        85 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +++|++|.+++.++++++.+.++++|+||||||+..
T Consensus        52 ~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~   87 (308)
T PLN00015         52 MHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYL   87 (308)
T ss_pred             EEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCC
Confidence            899999999999999999988899999999999864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=8.8e-15  Score=101.87  Aligned_cols=91  Identities=30%  Similarity=0.472  Sum_probs=74.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+.+++.|+++|++|++++|+.....                           ...+.+...  +.+
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~---------------------------~~~~~~~~~--~~~   55 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLE---------------------------EAVAECGAL--GTE   55 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999865431                           111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|+++++++.++++.+.+.++++|++|||+|....
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~   95 (253)
T PRK08217         56 VRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRD   95 (253)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCc
Confidence            7889999999999999999999888999999999997653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.63  E-value=5e-15  Score=115.91  Aligned_cols=91  Identities=33%  Similarity=0.481  Sum_probs=75.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~  421 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALD---------------------------ELVAEIRAK--GGT  421 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999876441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|++++.++++++.+.+|++|++|||||+...
T Consensus       422 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~  461 (657)
T PRK07201        422 AHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIR  461 (657)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence            8889999999999999999999999999999999998643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.63  E-value=8.9e-15  Score=102.11  Aligned_cols=93  Identities=39%  Similarity=0.537  Sum_probs=73.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC-c
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD-W   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   80 (125)
                      +|+++|||+++|||+++++.|+++|+.|+++.++.... .                         .+....... ... .
T Consensus         5 ~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~-~-------------------------~~~~~~~~~-~~~~~   57 (251)
T COG1028           5 GKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE-A-------------------------AEALAAAIK-EAGGG   57 (251)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh-h-------------------------HHHHHHHHH-hcCCC
Confidence            78999999999999999999999999988888876531 0                         000011111 111 2


Q ss_pred             eeeEEEecCCC-hHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTK-DAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .+.++.+|+++ ++++..+++.+...+|++|++|||||+...
T Consensus        58 ~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~   99 (251)
T COG1028          58 RAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGP   99 (251)
T ss_pred             cEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            57788899998 999999999999999999999999999865

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=1e-14  Score=102.50  Aligned_cols=104  Identities=26%  Similarity=0.342  Sum_probs=73.8

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||+++|||++  +|||++++++|+++|++|++++|+......... .               .........+.+..  .+
T Consensus         6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~--~g   67 (256)
T PRK12859          6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWG-V---------------DQDEQIQLQEELLK--NG   67 (256)
T ss_pred             CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeccccccccccc-c---------------cHHHHHHHHHHHHh--cC
Confidence            7999999998  499999999999999999998754211000000 0               00000011112221  23


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .++.++++|+++++++.++++++.+.+|++|++|||||.....+
T Consensus        68 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~  111 (256)
T PRK12859         68 VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNND  111 (256)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC
Confidence            47888999999999999999999999999999999999876544

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.62  E-value=1.1e-14  Score=100.74  Aligned_cols=92  Identities=33%  Similarity=0.473  Sum_probs=75.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++++||..+++.|+++|++|++++|++....                           .....+..  .+.+
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~---------------------------~~~~~~~~--~~~~   55 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAE---------------------------ALAAELRA--AGGE   55 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHH---------------------------HHHHHHHh--cCCc
Confidence            589999999999999999999999999999999865441                           11122221  1236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++.+|++|++++.++++.+...++++|++|||+|.....
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   96 (246)
T PRK05653         56 ARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDA   96 (246)
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCC
Confidence            78889999999999999999998899999999999987654

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.62  E-value=9.9e-15  Score=102.35  Aligned_cols=92  Identities=26%  Similarity=0.421  Sum_probs=75.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||..++++|+++|++ |++++|+.+...                           .....+..  .+.
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~---------------------------~~~~~l~~--~~~   56 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGE---------------------------AQAAELEA--LGA   56 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHH---------------------------HHHHHHHh--cCC
Confidence            789999999999999999999999998 999999865431                           11122211  123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++.+|+++++++.++++.+.+.++++|++|||+|.....
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~   98 (260)
T PRK06198         57 KAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRG   98 (260)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCC
Confidence            678889999999999999999999999999999999986543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.62  E-value=1e-14  Score=101.26  Aligned_cols=89  Identities=28%  Similarity=0.384  Sum_probs=71.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|||+++|||+++++.|+++|++|++. .|+.+..                           .+....+...  +.+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~---------------------------~~~~~~~~~~--~~~   52 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAA---------------------------QEVVNLITQA--GGK   52 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHH---------------------------HHHHHHHHhC--CCe
Confidence            799999999999999999999999999874 4554322                           1111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +..+++|++|++++.++++.+.++++++|++|||+|...
T Consensus        53 ~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~   91 (247)
T PRK09730         53 AFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILF   91 (247)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            788999999999999999999999999999999999863

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.62  E-value=8.6e-15  Score=101.71  Aligned_cols=97  Identities=30%  Similarity=0.359  Sum_probs=74.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+++++.|+++|++|++++|........                       .......+..  .+.+
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~-----------------------~~~~~~~~~~--~~~~   60 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAE-----------------------ADAVAAGIEA--AGGK   60 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHH-----------------------HHHHHHHHHh--cCCc
Confidence            68999999999999999999999999999987753211000                       0111112211  1236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++.+.+.++++|++|||+|.....+
T Consensus        61 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~  102 (249)
T PRK12827         61 ALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAA  102 (249)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876443

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=6.5e-15  Score=102.73  Aligned_cols=87  Identities=34%  Similarity=0.475  Sum_probs=69.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++..++.....                              +.+..... .+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~------------------------------~~~~~~~~-~~   53 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAA------------------------------EALADELG-DR   53 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHH------------------------------HHHHHHhC-Cc
Confidence            589999999999999999999999999988765432110                              11111112 26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCC-ccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGH-IDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nag~~  119 (125)
                      +.++++|+++++++.++++++.+.+++ +|++|||||+.
T Consensus        54 ~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~   92 (253)
T PRK08642         54 AIALQADVTDREQVQAMFATATEHFGKPITTVVNNALAD   92 (253)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcc
Confidence            788999999999999999999998887 99999999874

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.2e-14  Score=101.53  Aligned_cols=92  Identities=32%  Similarity=0.442  Sum_probs=71.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++|||+++|||.++++.|+++|+.|++. .|+.....                           ...+.+..  .+.
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~---------------------------~~~~~~~~--~~~   56 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAAD---------------------------ETIREIES--NGG   56 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH---------------------------HHHHHHHh--cCC
Confidence            5899999999999999999999999998775 56644331                           11122211  123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhc------CCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKF------GHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~------g~id~lv~nag~~~~~  122 (125)
                      ++.++++|++|++++.++++++.+++      +++|.+|||||.....
T Consensus        57 ~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~  104 (254)
T PRK12746         57 KAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQG  104 (254)
T ss_pred             cEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCC
Confidence            67789999999999999999998877      5799999999986543

>KOG1209|consensus

Probab=99.62  E-value=4.3e-15  Score=101.22  Aligned_cols=88  Identities=34%  Similarity=0.450  Sum_probs=74.4

Q ss_pred             CcEEEEecCC-cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGAS-VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      .|.++||||+ ||||.+++++|++.||.|+++.|+.+.-                               .++....   
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M-------------------------------~~L~~~~---   52 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPM-------------------------------AQLAIQF---   52 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchH-------------------------------hhHHHhh---
Confidence            4789999996 6899999999999999999999987644                               3333222   


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHh-hcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINN-KFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~-~~g~id~lv~nag~~~~~~  123 (125)
                      .+..+..|+++++.+..+..++.+ ..|++|.|+||||..-..|
T Consensus        53 gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~P   96 (289)
T KOG1209|consen   53 GLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFP   96 (289)
T ss_pred             CCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccc
Confidence            477889999999999999999998 7899999999999876544

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.61  E-value=7.9e-15  Score=98.66  Aligned_cols=95  Identities=28%  Similarity=0.431  Sum_probs=67.6

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++||||+.+|||+.+++.|++++. ++++++|+.....                        .....++.+...  +.++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~------------------------~~~~~i~~l~~~--g~~v   55 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSA------------------------EAEAAIRELESA--GARV   55 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGST------------------------THHHHHHHHHHT--T-EE
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccH------------------------HHHHHHHHHHhC--CCce
Confidence            789999999999999999999975 8999999943221                        112344555543  3489


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .++++|++|++++.++++.+.+.+++|+++||+||...+.++
T Consensus        56 ~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~   97 (181)
T PF08659_consen   56 EYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPI   97 (181)
T ss_dssp             EEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-G
T ss_pred             eeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeeccccc
Confidence            999999999999999999999999999999999999877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.61  E-value=1.1e-14  Score=101.57  Aligned_cols=84  Identities=31%  Similarity=0.512  Sum_probs=72.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||..+++.|+++|++|++++|+..                                 .    .. ..+
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~---------------------------------~----~~-~~~   49 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL---------------------------------T----QE-DYP   49 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh---------------------------------h----hc-CCc
Confidence            689999999999999999999999999999998641                                 0    01 225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+++|+++++++.++++++.++++++|++|||+|.....+
T Consensus        50 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~   91 (252)
T PRK08220         50 FATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGA   91 (252)
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            778999999999999999999999999999999999876543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=2.1e-14  Score=100.12  Aligned_cols=94  Identities=28%  Similarity=0.400  Sum_probs=73.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++++||++++++|+++|+++++..|+.....                          ......+...  +.+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~--------------------------~~~~~~~~~~--~~~   57 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEM--------------------------NETLKMVKEN--GGE   57 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHH--------------------------HHHHHHHHHc--CCe
Confidence            589999999999999999999999999988776432110                          0111122111  225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+.+|+++++++.++++++.+.++++|++|||||.....+
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~   99 (252)
T PRK06077         58 GIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSP   99 (252)
T ss_pred             eEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            678899999999999999999999999999999999866544

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.60  E-value=2.1e-14  Score=100.22  Aligned_cols=91  Identities=33%  Similarity=0.437  Sum_probs=74.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||++++||+.+++.|+++|++|++++|+.+...                           .....+.. . +.+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~---------------------------~~~~~~~~-~-~~~   51 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAE---------------------------AAAKVATD-A-GGS   51 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHh-c-CCc
Confidence            478999999999999999999999999999999865431                           11111111 1 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|+.|++++.++++.+.+.++++|++|||+|....
T Consensus        52 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~   91 (255)
T TIGR01963        52 VIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHV   91 (255)
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence            7889999999999999999999999999999999998654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.7e-14  Score=100.43  Aligned_cols=90  Identities=22%  Similarity=0.258  Sum_probs=71.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++||||++|||++++++|+++|++|++++|+.+...                           ...+.+... ...+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~---------------------------~~~~~~~~~-~~~~   52 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLE---------------------------RLADDLRAR-GAVA   52 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHH---------------------------HHHHHHHHh-cCCe
Confidence            378999999999999999999999999999999876441                           111222222 2237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|+++++++.++++++..   .+|++|||+|.....
T Consensus        53 ~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~ag~~~~~   90 (243)
T PRK07102         53 VSTHELDILDTASHAAFLDSLPA---LPDIVLIAVGTLGDQ   90 (243)
T ss_pred             EEEEecCCCChHHHHHHHHHHhh---cCCEEEECCcCCCCc
Confidence            88999999999999999988754   469999999986554

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.60  E-value=1.9e-14  Score=100.35  Aligned_cols=92  Identities=27%  Similarity=0.389  Sum_probs=73.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||.++++.|+++|++|++++|+.+...                           +..+++... ...+
T Consensus        12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~---------------------------~~~~~l~~~-~~~~   63 (247)
T PRK08945         12 DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLE---------------------------AVYDEIEAA-GGPQ   63 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHH---------------------------HHHHHHHhc-CCCC
Confidence            789999999999999999999999999999999875441                           111222222 2225


Q ss_pred             eeEEEecCC--ChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVT--KDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~--~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|+.  +++++.++++.+.+.++++|+||||||....
T Consensus        64 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~  105 (247)
T PRK08945         64 PAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGE  105 (247)
T ss_pred             ceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCC
Confidence            666777775  7899999999999999999999999998643

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.60  E-value=2e-14  Score=99.67  Aligned_cols=91  Identities=25%  Similarity=0.296  Sum_probs=72.2

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      ++|||+++|||+++++.|+++|++|++++|+.+...                          ....+.+...  +.++.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~~l~~~--~~~~~~   52 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDA--------------------------ESVVSAIQAQ--GGNARL   52 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHH--------------------------HHHHHHHHHc--CCeEEE
Confidence            589999999999999999999999999987643210                          1111222221  236888


Q ss_pred             EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          85 LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        85 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +++|++|++++.++++++.+.++++|++|||+|+....+
T Consensus        53 ~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~   91 (239)
T TIGR01831        53 LQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAA   91 (239)
T ss_pred             EEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence            999999999999999999999999999999999876543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.59  E-value=3.1e-14  Score=98.62  Aligned_cols=94  Identities=33%  Similarity=0.514  Sum_probs=74.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||.+++++|+++|++|+++.|+.....                          +...+.....  +.+
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~--------------------------~~~~~~~~~~--~~~   57 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAA--------------------------EELVEAVEAL--GRR   57 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHH--------------------------HHHHHHHHhc--CCc
Confidence            579999999999999999999999999988777654221                          0111222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++.+.+.++.+|++|||+|...+.+
T Consensus        58 ~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~   99 (249)
T PRK12825         58 AQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKP   99 (249)
T ss_pred             eEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCC
Confidence            788999999999999999999988899999999999766544

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.59  E-value=3.5e-14  Score=98.39  Aligned_cols=93  Identities=32%  Similarity=0.434  Sum_probs=74.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||.++++.|+++|++|+++.|+.....                          ....+.+...  +.+
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~~~~~~--~~~   56 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGA--------------------------EALVAEIGAL--GGK   56 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHH--------------------------HHHHHHHHhc--CCc
Confidence            589999999999999999999999999988888654221                          1111222111  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +..+.+|+++++++.++++++.+.++++|++|||+|.....
T Consensus        57 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   97 (248)
T PRK05557         57 ALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDN   97 (248)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence            78889999999999999999999999999999999986654

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.2e-14  Score=100.39  Aligned_cols=88  Identities=34%  Similarity=0.482  Sum_probs=68.0

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+++++|||+++|||+++++.|+++|++|+++.|+.....                           + ........ +.
T Consensus         1 m~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~---------------------------~-~~~~~~~~-~~   51 (257)
T PRK09291          1 MSKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVT---------------------------A-LRAEAARR-GL   51 (257)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------H-HHHHHHhc-CC
Confidence            7899999999999999999999999999999999865331                           1 11111111 22


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .+.++.+|++|++++.++++      +++|+||||||.....+
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~------~~id~vi~~ag~~~~~~   88 (257)
T PRK09291         52 ALRVEKLDLTDAIDRAQAAE------WDVDVLLNNAGIGEAGA   88 (257)
T ss_pred             cceEEEeeCCCHHHHHHHhc------CCCCEEEECCCcCCCcC
Confidence            57788999999999887764      48999999999876543

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=3.1e-14  Score=98.58  Aligned_cols=90  Identities=20%  Similarity=0.232  Sum_probs=73.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||..+++.|+++|++|++++|+++..+                           .....+..   ...
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~---~~~   54 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLK---------------------------RMKKTLSK---YGN   54 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHh---cCC
Confidence            689999999999999999999999999999999876441                           11111111   125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|+++++++.++++++...++++|.+++|+|....
T Consensus        55 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~   94 (238)
T PRK05786         55 IHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVE   94 (238)
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCC
Confidence            7788999999999999999998889999999999997653

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.57  E-value=4.4e-14  Score=98.10  Aligned_cols=91  Identities=29%  Similarity=0.404  Sum_probs=71.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           ...+.+... ....
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~---------------------------~~~~~l~~~-~~~~   57 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE---------------------------KVYDAIVEA-GHPE   57 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHH---------------------------HHHHHHHHc-CCCC
Confidence            689999999999999999999999999999999876441                           111222211 1224


Q ss_pred             eeEEEecCCC--hHHHHHHHHHHHhhc-CCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTK--DAEVVEAFDWINNKF-GHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~--~~~v~~~~~~~~~~~-g~id~lv~nag~~~  120 (125)
                      +.++++|+++  .+++.++++++.+.+ +++|++|||||...
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~   99 (239)
T PRK08703         58 PFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFY   99 (239)
T ss_pred             cceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccc
Confidence            6678899975  578999999998888 89999999999764

>PRK08324 short chain dehydrogenase; Validated

Probab=99.57  E-value=4e-14  Score=111.72  Aligned_cols=92  Identities=32%  Similarity=0.439  Sum_probs=76.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+.+...                           .....+...   ..
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~---------------------------~~~~~l~~~---~~  471 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAE---------------------------AAAAELGGP---DR  471 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHH---------------------------HHHHHHhcc---Cc
Confidence            689999999999999999999999999999999876441                           111222211   26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+.+|+++++++.++++++.+.+|++|++|||||+....+
T Consensus       472 v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~  513 (681)
T PRK08324        472 ALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGP  513 (681)
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876554

>KOG1610|consensus

Probab=99.57  E-value=3.4e-14  Score=101.34  Aligned_cols=89  Identities=29%  Similarity=0.521  Sum_probs=73.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|.++||||-+|+|+.+|++|.+.|+.|++-+.+++..                               +.+.......+
T Consensus        29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga-------------------------------e~L~~~~~s~r   77 (322)
T KOG1610|consen   29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA-------------------------------ESLRGETKSPR   77 (322)
T ss_pred             CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH-------------------------------HHHhhhhcCCc
Confidence            58899999999999999999999999999998766544                               22222221347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcC--CccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFG--HIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id~lv~nag~~~~  121 (125)
                      ...++.|++++++|+++.+.+.++.+  ++..||||||+...
T Consensus        78 l~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~  119 (322)
T KOG1610|consen   78 LRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGF  119 (322)
T ss_pred             ceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccc
Confidence            88889999999999999999998764  59999999997754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=4e-14  Score=106.81  Aligned_cols=90  Identities=29%  Similarity=0.427  Sum_probs=72.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+++|||+++++.|+++|++|++++++....                             ....+....   .
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~-----------------------------~l~~~~~~~---~  257 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGE-----------------------------ALAAVANRV---G  257 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHH-----------------------------HHHHHHHHc---C
Confidence            68999999999999999999999999999998853211                             012222222   1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ...+.+|+++++++.++++.+.++++++|+||||||+..+.+
T Consensus       258 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~  299 (450)
T PRK08261        258 GTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKT  299 (450)
T ss_pred             CeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCC
Confidence            246789999999999999999999999999999999876543

>PRK08017 oxidoreductase; Provisional

Probab=99.56  E-value=4.8e-14  Score=98.57  Aligned_cols=88  Identities=25%  Similarity=0.380  Sum_probs=71.8

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |.|+++|||+++|||.++++.|+++|++|++++|+.+..                               +.+...    
T Consensus         1 m~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~-------------------------------~~~~~~----   45 (256)
T PRK08017          1 MQKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV-------------------------------ARMNSL----   45 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh-------------------------------HHHHhC----
Confidence            678999999999999999999999999999999986543                               111111    


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhc-CCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~lv~nag~~~~~~  123 (125)
                      .+..+++|++|.+++.++++.+.... +++|.+|||+|...+.+
T Consensus        46 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~   89 (256)
T PRK08017         46 GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGP   89 (256)
T ss_pred             CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccc
Confidence            25678999999999999999887654 68999999999866443

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.56  E-value=4e-14  Score=97.66  Aligned_cols=82  Identities=24%  Similarity=0.383  Sum_probs=67.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++|||+++|||++++++|+++|++|++++|+....                               +.+...   ..+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~---~~~   47 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQD-------------------------------TALQAL---PGV   47 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcch-------------------------------HHHHhc---ccc
Confidence            8999999999999999999999999999999987543                               111111   145


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|++++.++++.+..  +++|++|||+|+..
T Consensus        48 ~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~   83 (225)
T PRK08177         48 HIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISG   83 (225)
T ss_pred             ceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccC
Confidence            6778999999999999998754  48999999999864

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.55  E-value=8.3e-14  Score=97.21  Aligned_cols=87  Identities=26%  Similarity=0.409  Sum_probs=68.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++|||+++|||++++++|+++|++|++++|+....                              ...+.... +.++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~------------------------------~~~~~~~~-~~~~   50 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKE------------------------------LTKLAEQY-NSNL   50 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHH------------------------------HHHHHhcc-CCce
Confidence            8999999999999999999999999999999976311                              01121111 2367


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCc--c--EEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHI--D--VMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~i--d--~lv~nag~~~  120 (125)
                      .++++|+++++++.++++++.+.++..  +  .+|+|+|...
T Consensus        51 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~   92 (251)
T PRK06924         51 TFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVA   92 (251)
T ss_pred             EEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecc
Confidence            789999999999999999988776532  2  7999999864

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.55  E-value=1.6e-14  Score=104.15  Aligned_cols=34  Identities=29%  Similarity=0.382  Sum_probs=31.8

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      ||++||||++  +|||+++|+.|+++|++|++.++.
T Consensus         8 gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          8 GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            8999999996  999999999999999999997765

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.55  E-value=7.4e-14  Score=102.94  Aligned_cols=101  Identities=21%  Similarity=0.323  Sum_probs=71.7

Q ss_pred             CcEEEEecCCcchHHH--HHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAA--ILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~--~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||+++|+|.+  +++.| +.|++++++++..+........+.-+                ....+....... +
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy----------------~~~a~~~~a~~~-G  102 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWY----------------NSAAFDKFAKAA-G  102 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccc----------------hHHHHHHHHHhc-C
Confidence            6899999999999999  89999 99999988886432210000000000                001112222222 2


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..+..+.||+++++++.++++.+.+++|++|+||||+|...
T Consensus       103 ~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        103 LYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            35678899999999999999999999999999999999874

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.55  E-value=8.9e-14  Score=96.79  Aligned_cols=85  Identities=28%  Similarity=0.365  Sum_probs=68.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||+++|||++++++|+++|++|++++|+....                                 +... .+.++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~---------------------------------~~~~-~~~~~   47 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS---------------------------------LAAA-AGERL   47 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh---------------------------------hhhc-cCCeE
Confidence            5899999999999999999999999999999975421                                 0011 12368


Q ss_pred             eEEEecCCChHHHHHHHHH-HHhhc---CCccEEEeCcccCCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDW-INNKF---GHIDVMINNAGVNEF  121 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~-~~~~~---g~id~lv~nag~~~~  121 (125)
                      .++++|+++++++.+++++ +.+.+   +++|++|||+|....
T Consensus        48 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~   90 (243)
T PRK07023         48 AEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEP   90 (243)
T ss_pred             EEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCC
Confidence            8899999999999998877 55544   479999999998653

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.54  E-value=6.3e-14  Score=97.56  Aligned_cols=82  Identities=28%  Similarity=0.409  Sum_probs=66.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||+++|||+++++.|+++|++|++++|+.+..                               +.+....  .++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~--~~~   48 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVL-------------------------------DELHTQS--ANI   48 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHH-------------------------------HHHHHhc--CCC
Confidence            7899999999999999999999999999999986533                               1121111  256


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++++|++|++++.++++++..   .+|.+|||||...
T Consensus        49 ~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~ag~~~   83 (240)
T PRK06101         49 FTLAFDVTDHPGTKAALSQLPF---IPELWIFNAGDCE   83 (240)
T ss_pred             eEEEeeCCCHHHHHHHHHhccc---CCCEEEEcCcccc
Confidence            7889999999999999887642   4799999998753

>KOG1478|consensus

Probab=99.54  E-value=9.3e-14  Score=96.82  Aligned_cols=96  Identities=27%  Similarity=0.329  Sum_probs=80.1

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcC-----CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKG-----HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK   75 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (125)
                      |.|+++|||+++|||.+++.+|++..     .++++.+|+.++.+.++                           ..+..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc---------------------------~~lk~   54 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVC---------------------------AALKA   54 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHH---------------------------HHHHH
Confidence            57899999999999999999999764     46888999988774433                           33433


Q ss_pred             cCC--CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          76 ENP--DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        76 ~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ..+  ..++.++.+|+++..++.++.+++..++.++|.++.|||++.+..
T Consensus        55 f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~g  104 (341)
T KOG1478|consen   55 FHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPG  104 (341)
T ss_pred             hCCCceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCc
Confidence            333  447889999999999999999999999999999999999987643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.53  E-value=5.9e-14  Score=97.77  Aligned_cols=83  Identities=39%  Similarity=0.615  Sum_probs=69.9

Q ss_pred             cCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeEEE
Q psy7029           9 GAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLK   86 (125)
Q Consensus         9 G~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (125)
                      |++  +|||+++++.|+++|++|++++|+.+..                           .+.++.+....+. +  .++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~---------------------------~~~~~~l~~~~~~-~--~~~   50 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKL---------------------------ADALEELAKEYGA-E--VIQ   50 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHH---------------------------HHHHHHHHHHTTS-E--EEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHH---------------------------HHHHHHHHHHcCC-c--eEe
Confidence            566  9999999999999999999999998754                           2333455444432 3  499


Q ss_pred             ecCCChHHHHHHHHHHHhhc-CCccEEEeCcccCCC
Q psy7029          87 VDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEF  121 (125)
Q Consensus        87 ~Dv~~~~~v~~~~~~~~~~~-g~id~lv~nag~~~~  121 (125)
                      +|+++++++.++++++.+.+ |++|+||||+|....
T Consensus        51 ~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~   86 (241)
T PF13561_consen   51 CDLSDEESVEALFDEAVERFGGRIDILVNNAGISPP   86 (241)
T ss_dssp             SCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTG
T ss_pred             ecCcchHHHHHHHHHHHhhcCCCeEEEEeccccccc
Confidence            99999999999999999999 999999999998875

...

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.53  E-value=1.9e-13  Score=94.42  Aligned_cols=90  Identities=33%  Similarity=0.450  Sum_probs=71.2

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      +||||++++||..+++.|+++|++|++++|+.....                          ....+.+...  +.++.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~--------------------------~~~~~~~~~~--~~~~~~   52 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGA--------------------------EEVVEELKAY--GVKALG   52 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHH--------------------------HHHHHHHHhc--CCceEE
Confidence            589999999999999999999999999998753110                          0111222111  236788


Q ss_pred             EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          85 LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        85 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.+|++|++++.++++.+.+.++++|++|||+|.....
T Consensus        53 ~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~   90 (239)
T TIGR01830        53 VVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDN   90 (239)
T ss_pred             EEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence            99999999999999999999999999999999987543

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.5e-13  Score=96.48  Aligned_cols=78  Identities=31%  Similarity=0.446  Sum_probs=60.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.....                              ... ...   .
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~------------------------------~~~-~~~---~   59 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNS------------------------------ESN-DES---P   59 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhh------------------------------hhh-ccC---C
Confidence            789999999999999999999999999999998762110                              000 011   1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ...+.+|++|.+++.+       .++++|+||||||+..
T Consensus        60 ~~~~~~D~~~~~~~~~-------~~~~iDilVnnAG~~~   91 (245)
T PRK12367         60 NEWIKWECGKEESLDK-------QLASLDVLILNHGINP   91 (245)
T ss_pred             CeEEEeeCCCHHHHHH-------hcCCCCEEEECCccCC
Confidence            2467899999988654       3568999999999854

>PRK12742 oxidoreductase; Provisional

Probab=99.51  E-value=1.3e-13  Score=95.34  Aligned_cols=83  Identities=28%  Similarity=0.452  Sum_probs=63.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch-hhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||+++++.|+++|++|+++.++.. ..                               +.+....   
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~-------------------------------~~l~~~~---   51 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA-------------------------------ERLAQET---   51 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHH-------------------------------HHHHHHh---
Confidence            689999999999999999999999999988876432 22                               1111111   


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      .+..+.+|++|++++.+.+++    ++++|++|||||.....
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~~----~~~id~li~~ag~~~~~   89 (237)
T PRK12742         52 GATAVQTDSADRDAVIDVVRK----SGALDILVVNAGIAVFG   89 (237)
T ss_pred             CCeEEecCCCCHHHHHHHHHH----hCCCcEEEECCCCCCCC
Confidence            234678999999988777653    57899999999986543

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.51  E-value=2e-13  Score=94.30  Aligned_cols=81  Identities=35%  Similarity=0.450  Sum_probs=68.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||++++++|+++|++|++++|+.+..                                     .   .
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------------------------------------~---~   42 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-------------------------------------F---P   42 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-------------------------------------c---C
Confidence            68999999999999999999999999999999975411                                     0   1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ..++.+|+++++++.++++++.+.+ ++|++|||+|+..+.+
T Consensus        43 ~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~   83 (234)
T PRK07577         43 GELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQP   83 (234)
T ss_pred             ceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCC
Confidence            1357899999999999999988876 6899999999876654

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.50  E-value=6.2e-13  Score=87.28  Aligned_cols=94  Identities=24%  Similarity=0.334  Sum_probs=72.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|||+++|||.++++.|+++|+ .|+++.|+.+.....                        ...++.+...  +.+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~------------------------~~~~~~~~~~--~~~   54 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGA------------------------AELLAELEAL--GAE   54 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccH------------------------HHHHHHHHhc--CCe
Confidence            5789999999999999999999997 688888875432110                        0001222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++.+|+++++++.++++++...++++|.+|||+|.....
T Consensus        55 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~   95 (180)
T smart00822       55 VTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDG   95 (180)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCcc
Confidence            78889999999999999999998899999999999976543

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08264 short chain dehydrogenase; Validated

Probab=99.50  E-value=3.4e-13  Score=93.43  Aligned_cols=77  Identities=36%  Similarity=0.547  Sum_probs=65.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++||||+++||+++++.|+++|+ +|++++|+.+..                               +.     .+.
T Consensus         6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~-------------------------------~~-----~~~   49 (238)
T PRK08264          6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV-------------------------------TD-----LGP   49 (238)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhh-------------------------------hh-----cCC
Confidence            57999999999999999999999999 999999986533                               11     122


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCccc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV  118 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~  118 (125)
                      .+.++.+|++|++++.++++.    ++++|++|||+|.
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~   83 (238)
T PRK08264         50 RVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGI   83 (238)
T ss_pred             ceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCc
Confidence            678899999999998887765    4689999999998

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.8e-13  Score=94.39  Aligned_cols=84  Identities=30%  Similarity=0.370  Sum_probs=66.1

Q ss_pred             EEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeEE
Q psy7029           6 VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSL   85 (125)
Q Consensus         6 lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (125)
                      +|||+++|||++++++|+++|++|++++|+.+...                           ...+.+.   .+.++.++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~---~~~~~~~~   50 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLA---------------------------AAARALG---GGAPVRTA   50 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHh---cCCceEEE
Confidence            58999999999999999999999999999865331                           1112221   12367788


Q ss_pred             EecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          86 KVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        86 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .+|++|++++.+++++    .+++|+||||+|.....+
T Consensus        51 ~~Dl~~~~~~~~~~~~----~~~id~li~~ag~~~~~~   84 (230)
T PRK07041         51 ALDITDEAAVDAFFAE----AGPFDHVVITAADTPGGP   84 (230)
T ss_pred             EccCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCC
Confidence            9999999999888875    478999999999876543

>KOG1207|consensus

Probab=99.49  E-value=5.9e-14  Score=93.10  Aligned_cols=87  Identities=33%  Similarity=0.457  Sum_probs=72.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |+++++||+..|||+.++..|++.|++|+++.|++..+                               ..+..+.+. .
T Consensus         7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L-------------------------------~sLV~e~p~-~   54 (245)
T KOG1207|consen    7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANL-------------------------------LSLVKETPS-L   54 (245)
T ss_pred             ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHH-------------------------------HHHHhhCCc-c
Confidence            78999999999999999999999999999999998766                               555555443 5


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +..+..|+++.+.+.+.+    ...+.+|+||||||+.-.+|+
T Consensus        55 I~Pi~~Dls~wea~~~~l----~~v~pidgLVNNAgvA~~~pf   93 (245)
T KOG1207|consen   55 IIPIVGDLSAWEALFKLL----VPVFPIDGLVNNAGVATNHPF   93 (245)
T ss_pred             eeeeEecccHHHHHHHhh----cccCchhhhhccchhhhcchH
Confidence            788899999877655544    456799999999999887776

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.8e-13  Score=93.64  Aligned_cols=79  Identities=27%  Similarity=0.405  Sum_probs=63.4

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||+++|||+++++.|+++|++|++++|+.+..                               +.+....   .+.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~-------------------------------~~~~~~~---~~~   47 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDL-------------------------------EVAAKEL---DVD   47 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHhc---cCc
Confidence            589999999999999999999999999999986543                               1111111   245


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++++|+++++++.++++++..   ++|+||||+|..
T Consensus        48 ~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~   80 (223)
T PRK05884         48 AIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPS   80 (223)
T ss_pred             EEecCCCCHHHHHHHHHHHhh---cCcEEEECCCcc
Confidence            788999999999999887643   699999999863

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.48  E-value=5.2e-13  Score=92.70  Aligned_cols=83  Identities=39%  Similarity=0.552  Sum_probs=66.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++++||..+++.|+++|++|++++|+.+..                               +.+....   .
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~-------------------------------~~~~~~~---~   54 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAAL-------------------------------DRLAGET---G   54 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHh---C
Confidence            68999999999999999999999999999999986543                               1221111   2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ...+.+|+++++++.++++.    .+++|++|||+|.....
T Consensus        55 ~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~~~~   91 (245)
T PRK07060         55 CEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIASLE   91 (245)
T ss_pred             CeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCC
Confidence            34678999999988887775    57899999999987644

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.46  E-value=6.8e-13  Score=91.33  Aligned_cols=81  Identities=31%  Similarity=0.412  Sum_probs=65.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||++++||++++++|+++|++|++++|+.+..                               +.+...    .+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~-------------------------------~~~~~~----~~   46 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL-------------------------------AALQAL----GA   46 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHH-------------------------------HHHHhc----cc
Confidence            8999999999999999999999999999999986533                               111111    23


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|+++.+++.++++.+..  +++|++|||+|...
T Consensus        47 ~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~   82 (222)
T PRK06953         47 EALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYG   82 (222)
T ss_pred             eEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCccc
Confidence            4789999999999998876532  47999999999873

>KOG1210|consensus

Probab=99.46  E-value=5.3e-13  Score=95.28  Aligned_cols=95  Identities=23%  Similarity=0.198  Sum_probs=78.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||+++|||+.++.++..+|++|.++.|+.++..+                           ..+.++.......+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~---------------------------a~~~l~l~~~~~~v   86 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLE---------------------------AKAELELLTQVEDV   86 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHH---------------------------HHhhhhhhhcccee
Confidence            589999999999999999999999999999999887622                           22333222222247


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .++.+|+.|.+++..+++++....+.+|.+|+|||...++-+
T Consensus        87 ~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f  128 (331)
T KOG1210|consen   87 SYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLF  128 (331)
T ss_pred             eEeccccccHHHHHHHHhhhhhccCCcceEEEecCccccccc
Confidence            789999999999999999999999999999999999876543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.46  E-value=4.1e-13  Score=92.84  Aligned_cols=76  Identities=32%  Similarity=0.504  Sum_probs=61.5

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||+++++.|+++|++|++++|+....                                     . ..
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------------------------------------~-~~   45 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-------------------------------------L-SG   45 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-------------------------------------c-CC
Confidence            378999999999999999999999999999999874311                                     0 12


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|++++      ++++.+.++++|++|||||+..
T Consensus        46 ~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~   79 (235)
T PRK06550         46 NFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILD   79 (235)
T ss_pred             cEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCC
Confidence            567889999987      4445556789999999999753

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.46  E-value=7.7e-13  Score=114.88  Aligned_cols=120  Identities=20%  Similarity=0.184  Sum_probs=77.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhh---HH-----HHHHHHHHHHHhhcCCcccc----------
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMID---FA-----ESLFAFFVDIVAAKGHQVIG----------   62 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~----------   62 (125)
                      ++++|||||++|||++++++|+++ |++|++++|+.....   +.     ..+...........+....+          
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence            689999999999999999999998 699999999831100   00     00000000011111111000          


Q ss_pred             --ccchHhHHHHHhhcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          63 --FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        63 --~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                        .......++.+..  .+.++.++.||++|.+++.++++.+.++ ++||+||||||+....++
T Consensus      2077 ~~~~ei~~~la~l~~--~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i 2137 (2582)
T TIGR02813      2077 LSSLEIAQALAAFKA--AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHI 2137 (2582)
T ss_pred             chhHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCc
Confidence              0011111222222  2347889999999999999999999877 689999999999876654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.45  E-value=6.5e-13  Score=91.19  Aligned_cols=84  Identities=38%  Similarity=0.581  Sum_probs=66.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||++++||+.+++.|+++ ++|++++|+.+..                               +.+.....  
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~-------------------------------~~~~~~~~--   47 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERL-------------------------------DELAAELP--   47 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHH-------------------------------HHHHHHhc--
Confidence            3689999999999999999999999 9999999986533                               11111111  


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      .+.++.+|++|++++.++++.+    +++|++||++|.....
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~~----~~id~vi~~ag~~~~~   85 (227)
T PRK08219         48 GATPFPVDLTDPEAIAAAVEQL----GRLDVLVHNAGVADLG   85 (227)
T ss_pred             cceEEecCCCCHHHHHHHHHhc----CCCCEEEECCCcCCCC
Confidence            3567899999999988887753    5899999999986644

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.43  E-value=1.6e-12  Score=97.10  Aligned_cols=80  Identities=31%  Similarity=0.521  Sum_probs=61.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+.+...                              ......  ...
T Consensus       178 gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~------------------------------~~~~~~--~~~  225 (406)
T PRK07424        178 GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKIT------------------------------LEINGE--DLP  225 (406)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH------------------------------HHHhhc--CCC
Confidence            789999999999999999999999999999998765331                              001001  113


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +..+.+|++|++++.+.+       +++|++|||||+..
T Consensus       226 v~~v~~Dvsd~~~v~~~l-------~~IDiLInnAGi~~  257 (406)
T PRK07424        226 VKTLHWQVGQEAALAELL-------EKVDILIINHGINV  257 (406)
T ss_pred             eEEEEeeCCCHHHHHHHh-------CCCCEEEECCCcCC
Confidence            567889999998876543       57999999999864

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.42  E-value=1.7e-12  Score=89.90  Aligned_cols=78  Identities=27%  Similarity=0.315  Sum_probs=60.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+++|||+++|||++++++|++++  ..|+...|+....                                     ....
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------------------------------------~~~~   43 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------------------------------------FQHD   43 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------------------------------------cccC
Confidence            378999999999999999999985  5665555543210                                     1122


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++.++++|+++++++.++.    ++++++|+||||||+...
T Consensus        44 ~~~~~~~Dls~~~~~~~~~----~~~~~id~li~~aG~~~~   80 (235)
T PRK09009         44 NVQWHALDVTDEAEIKQLS----EQFTQLDWLINCVGMLHT   80 (235)
T ss_pred             ceEEEEecCCCHHHHHHHH----HhcCCCCEEEECCccccc
Confidence            6788999999999987754    456899999999999753

>KOG1611|consensus

Probab=99.41  E-value=2.8e-12  Score=88.00  Aligned_cols=90  Identities=30%  Similarity=0.435  Sum_probs=69.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc-CC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE-NP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   78 (125)
                      .+.++||||++|||+.++++|.+. |..+++. .|+++..                              .+++... ..
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a------------------------------~~~l~~k~~~   52 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA------------------------------ATELALKSKS   52 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh------------------------------hHHHHHhhcc
Confidence            467999999999999999999975 6665554 4445432                              1222221 23


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhh--cCCccEEEeCcccCCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNK--FGHIDVMINNAGVNEF  121 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~--~g~id~lv~nag~~~~  121 (125)
                      ..+++.++.|+++.+++.++++++.+-  ..++|+|+||||+...
T Consensus        53 d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~   97 (249)
T KOG1611|consen   53 DSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALS   97 (249)
T ss_pred             CCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeee
Confidence            458999999999999999999999987  4589999999999764

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.40  E-value=2.8e-12  Score=93.23  Aligned_cols=81  Identities=20%  Similarity=0.284  Sum_probs=62.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||+++|||++|+||+++++.|+++|  ++|++++|+....                               ..+......
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~-------------------------------~~~~~~~~~   52 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ-------------------------------WEMQQKFPA   52 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH-------------------------------HHHHHHhCC
Confidence            7899999999999999999999986  7899998875422                               111111111


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++.+|++|++.+.++++       ++|++||+||...
T Consensus        53 ~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~Ag~~~   86 (324)
T TIGR03589        53 PCLRFFIGDVRDKERLTRALR-------GVDYVVHAAALKQ   86 (324)
T ss_pred             CcEEEEEccCCCHHHHHHHHh-------cCCEEEECcccCC
Confidence            257789999999999888776       5899999999753

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.39  E-value=2.2e-12  Score=87.44  Aligned_cols=69  Identities=36%  Similarity=0.597  Sum_probs=59.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||+++|||+++++.|+++ ++|++++|+..                                              
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------------------------------   34 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------------------------------   34 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------------------------------
Confidence            6899999999999999999999 99999988531                                              


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .+++|+++++++.+++++    ++++|+||||||...+.+
T Consensus        35 ~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~~~~~   70 (199)
T PRK07578         35 DVQVDITDPASIRALFEK----VGKVDAVVSAAGKVHFAP   70 (199)
T ss_pred             ceEecCCChHHHHHHHHh----cCCCCEEEECCCCCCCCc
Confidence            268999999999988875    478999999999876544

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.39  E-value=3.6e-12  Score=92.29  Aligned_cols=85  Identities=20%  Similarity=0.216  Sum_probs=64.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||++|+||++++++|+++|++|+++.|+......                           ............+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~~~~   57 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKK---------------------------TDHLLALDGAKER   57 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhh---------------------------HHHHHhccCCCCc
Confidence            7899999999999999999999999999998887653310                           0000110111126


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+++++++.++++       ++|++|||||...
T Consensus        58 ~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~   89 (325)
T PLN02989         58 LKLFKADLLDEGSFELAID-------GCETVFHTASPVA   89 (325)
T ss_pred             eEEEeCCCCCchHHHHHHc-------CCCEEEEeCCCCC
Confidence            7888999999999888876       5899999999653

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.37  E-value=4e-12  Score=97.94  Aligned_cols=85  Identities=25%  Similarity=0.372  Sum_probs=64.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh-----c
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK-----E   76 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~   76 (125)
                      ||+++||||+||||++++++|+++|++|++++|+.+.....                           .+.+..     .
T Consensus        80 gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l---------------------------~~~l~~~~L~~~  132 (576)
T PLN03209         80 EDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL---------------------------VQSVKQMKLDVE  132 (576)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH---------------------------HHHhhhhccccc
Confidence            78999999999999999999999999999999987654111                           011100     0


Q ss_pred             C--CCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          77 N--PDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        77 ~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .  ...++.++.+|++|.+++.+.+       +++|+||||+|...
T Consensus       133 Ga~~~~~v~iV~gDLtD~esI~~aL-------ggiDiVVn~AG~~~  171 (576)
T PLN03209        133 GTQPVEKLEIVECDLEKPDQIGPAL-------GNASVVICCIGASE  171 (576)
T ss_pred             cccccCceEEEEecCCCHHHHHHHh-------cCCCEEEEcccccc
Confidence            0  1125788999999998876543       57999999999764

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.35  E-value=1.2e-11  Score=85.04  Aligned_cols=89  Identities=24%  Similarity=0.340  Sum_probs=75.4

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||+.||+|-.  +.|++.+|+.|.++|+++..+...+...                            ++.+++.+..+ 
T Consensus         6 GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~----------------------------krv~~la~~~~-   56 (259)
T COG0623           6 GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLE----------------------------KRVEELAEELG-   56 (259)
T ss_pred             CceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHH----------------------------HHHHHHHhhcc-
Confidence            8999999974  6899999999999999999999877432                            44455555443 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       ....++||+++.+++.++|+++.++||++|+|||+-|...
T Consensus        57 -s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~   96 (259)
T COG0623          57 -SDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAP   96 (259)
T ss_pred             -CCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCC
Confidence             2567899999999999999999999999999999998765

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.32  E-value=2e-11  Score=88.34  Aligned_cols=84  Identities=20%  Similarity=0.241  Sum_probs=64.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh-cCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK-ENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   80 (125)
                      |++++|||++|+||.+++++|+++|++|+++.|+......                            ...+.. .....
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------------------~~~~~~~~~~~~   56 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKK----------------------------TEHLLALDGAKE   56 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHH----------------------------HHHHHhccCCCC
Confidence            7899999999999999999999999999999887653311                            011111 01112


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|+++++.+.++++       .+|++||+|+...
T Consensus        57 ~~~~~~~Dl~~~~~~~~~~~-------~~d~vih~A~~~~   89 (322)
T PLN02986         57 RLKLFKADLLEESSFEQAIE-------GCDAVFHTASPVF   89 (322)
T ss_pred             ceEEEecCCCCcchHHHHHh-------CCCEEEEeCCCcC
Confidence            57788999999999888887       5899999999753

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.31  E-value=1.9e-11  Score=89.29  Aligned_cols=87  Identities=22%  Similarity=0.252  Sum_probs=64.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh---cCCC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK---ENPD   79 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~   79 (125)
                      |++|||||+|+||.+++++|+++|++|++++|+.+....                          .....+..   ....
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~--------------------------~~~~~~~~~~~~~~~   54 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNT--------------------------QRIEHIYEDPHNVNK   54 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccch--------------------------hhhhhhhhccccccc
Confidence            689999999999999999999999999999987542100                          00011100   0012


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..+.++.+|++|++++.++++..     ++|++||+|+...
T Consensus        55 ~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViH~Aa~~~   90 (343)
T TIGR01472        55 ARMKLHYGDLTDSSNLRRIIDEI-----KPTEIYNLAAQSH   90 (343)
T ss_pred             cceeEEEeccCCHHHHHHHHHhC-----CCCEEEECCcccc
Confidence            25788999999999999988863     5899999999754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.31  E-value=2e-11  Score=89.44  Aligned_cols=83  Identities=17%  Similarity=0.182  Sum_probs=64.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||++|+||.++++.|+++|++|++++|+.....                           .....+..   ..+
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~---~~~   53 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSP---------------------------NLFELLNL---AKK   53 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccch---------------------------hHHHHHhh---cCC
Confidence            689999999999999999999999999999998765321                           00011111   114


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|+++.+++.++++..     ++|++||+||..
T Consensus        54 ~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~~   86 (349)
T TIGR02622        54 IEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQP   86 (349)
T ss_pred             ceEEEccCCCHHHHHHHHhhc-----CCCEEEECCccc
Confidence            667899999999999988863     689999999964

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1502|consensus

Probab=99.31  E-value=2.4e-11  Score=87.80  Aligned_cols=88  Identities=26%  Similarity=0.314  Sum_probs=71.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++||||+|.||..+++.|+++||.|..+.|+++.....                         ..+.++.  ....+
T Consensus         6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-------------------------~~L~~l~--~a~~~   58 (327)
T KOG1502|consen    6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-------------------------EHLRKLE--GAKER   58 (327)
T ss_pred             CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-------------------------HHHHhcc--cCccc
Confidence            57999999999999999999999999999999998753111                         1123332  22336


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ...+..|++|++++..+++       ++|+++|.|....+..
T Consensus        59 l~l~~aDL~d~~sf~~ai~-------gcdgVfH~Asp~~~~~   93 (327)
T KOG1502|consen   59 LKLFKADLLDEGSFDKAID-------GCDGVFHTASPVDFDL   93 (327)
T ss_pred             ceEEeccccccchHHHHHh-------CCCEEEEeCccCCCCC
Confidence            8899999999999999998       6999999999877643

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.29  E-value=5.7e-11  Score=79.80  Aligned_cols=85  Identities=20%  Similarity=0.212  Sum_probs=66.2

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++ |+|..+++.|+++|++|++++|+.+...                           .....+.   ...++.
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~---------------------------~l~~~l~---~~~~i~   50 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLE---------------------------NVKREST---TPESIT   50 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHH---------------------------HHHHHhh---cCCcEE
Confidence            68999998 6777899999999999999999765331                           1111111   123678


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++++|++|++++.++++.+.+.++++|++|+.+=..
T Consensus        51 ~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~~   86 (177)
T PRK08309         51 PLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHSS   86 (177)
T ss_pred             EEEccCCCHHHHHHHHHHHHHHcCCCeEEEEecccc
Confidence            889999999999999999999999999999765443

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.28  E-value=2.6e-11  Score=88.37  Aligned_cols=88  Identities=20%  Similarity=0.231  Sum_probs=65.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh--cCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK--ENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   79 (125)
                      ++++||||++|+||.+++++|+++|++|++++|+......                          ...+.+..  ...+
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~--------------------------~~~~~~~~~~~~~~   59 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNT--------------------------QRLDHIYIDPHPNK   59 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccc--------------------------cchhhhcccccccc
Confidence            6899999999999999999999999999999987542100                          00011110  0112


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..+.++.+|++|.+++.++++..     ++|+|||||+...
T Consensus        60 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~   95 (340)
T PLN02653         60 ARMKLHYGDLSDASSLRRWLDDI-----KPDEVYNLAAQSH   95 (340)
T ss_pred             CceEEEEecCCCHHHHHHHHHHc-----CCCEEEECCcccc
Confidence            25788899999999999988864     5899999999854

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.28  E-value=4.2e-11  Score=87.24  Aligned_cols=83  Identities=17%  Similarity=0.141  Sum_probs=62.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||.+++++|+++|++|+++.|+......                            ...+.......+
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------------------~~~~~~~~~~~~   60 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKK----------------------------IAHLRALQELGD   60 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHH----------------------------HHHHHhcCCCCc
Confidence            6899999999999999999999999999988887542210                            000100001115


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|++|++++.++++       ++|.|||+|+..
T Consensus        61 ~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~   91 (338)
T PLN00198         61 LKIFGADLTDEESFEAPIA-------GCDLVFHVATPV   91 (338)
T ss_pred             eEEEEcCCCChHHHHHHHh-------cCCEEEEeCCCC
Confidence            7788999999998888775       589999999864

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.27  E-value=5.7e-11  Score=87.13  Aligned_cols=82  Identities=20%  Similarity=0.219  Sum_probs=63.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++||||++|+||.+++++|+++|++|++++|+.....                           .....+.   ...+
T Consensus        10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~---~~~~   59 (353)
T PLN02896         10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSL---------------------------HLLSKWK---EGDR   59 (353)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHH---------------------------HHHHhhc---cCCe
Confidence            578999999999999999999999999999988754321                           1111111   1236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+++++.+.++++       .+|.|||+|+...
T Consensus        60 ~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~   91 (353)
T PLN02896         60 LRLFRADLQEEGSFDEAVK-------GCDGVFHVAASME   91 (353)
T ss_pred             EEEEECCCCCHHHHHHHHc-------CCCEEEECCcccc
Confidence            7789999999999888775       5899999999864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.26  E-value=4.8e-11  Score=86.09  Aligned_cols=84  Identities=18%  Similarity=0.224  Sum_probs=63.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh-cCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK-ENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   80 (125)
                      +++++||||+|+||..++++|+++|++|+++.|+......                            ...+.. .....
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------------------~~~~~~~~~~~~   55 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKK----------------------------TEHLLALDGAKE   55 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhh----------------------------HHHHHhccCCCC
Confidence            5789999999999999999999999999999987543210                            011110 01112


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|+++++.+.++++       .+|.|||+|+...
T Consensus        56 ~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~   88 (322)
T PLN02662         56 RLHLFKANLLEEGSFDSVVD-------GCEGVFHTASPFY   88 (322)
T ss_pred             ceEEEeccccCcchHHHHHc-------CCCEEEEeCCccc
Confidence            67789999999998888776       5899999998753

>PLN02240 UDP-glucose 4-epimerase

Probab=99.26  E-value=7e-11  Score=86.26  Aligned_cols=89  Identities=21%  Similarity=0.256  Sum_probs=64.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|++|.++++.|+++|++|++++|........                        .......... ...+
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~------------------------~~~~~~~~~~-~~~~   59 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEA------------------------LRRVKELAGD-LGDN   59 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHH------------------------HHHHHHhhcc-cCcc
Confidence            78999999999999999999999999999998754322100                        0000111101 1125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++.     ..+|.|||+|+...
T Consensus        60 ~~~~~~D~~~~~~l~~~~~~-----~~~d~vih~a~~~~   93 (352)
T PLN02240         60 LVFHKVDLRDKEALEKVFAS-----TRFDAVIHFAGLKA   93 (352)
T ss_pred             ceEEecCcCCHHHHHHHHHh-----CCCCEEEEccccCC
Confidence            67889999999999888875     27999999999754

>PLN02214 cinnamoyl-CoA reductase

Probab=99.25  E-value=1e-10  Score=85.69  Aligned_cols=84  Identities=21%  Similarity=0.223  Sum_probs=64.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||.++++.|+++|++|+++.|+.+...                          ......+..  ...+
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~--------------------------~~~~~~~~~--~~~~   61 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPK--------------------------NTHLRELEG--GKER   61 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhh--------------------------HHHHHHhhC--CCCc
Confidence            689999999999999999999999999999999754320                          000111111  1125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++       ++|+|||+|+...
T Consensus        62 ~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~   93 (342)
T PLN02214         62 LILCKADLQDYEALKAAID-------GCDGVFHTASPVT   93 (342)
T ss_pred             EEEEecCcCChHHHHHHHh-------cCCEEEEecCCCC
Confidence            7788999999999888876       5899999999754

>PLN02650 dihydroflavonol-4-reductase

Probab=99.22  E-value=1.5e-10  Score=84.75  Aligned_cols=84  Identities=18%  Similarity=0.184  Sum_probs=63.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh-cCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK-ENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   80 (125)
                      .+++|||||+|+||.+++++|+++|++|+++.|+.......                            ..+.. .....
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~----------------------------~~~~~~~~~~~   56 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKV----------------------------KHLLDLPGATT   56 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHH----------------------------HHHHhccCCCC
Confidence            57999999999999999999999999999999876433110                            11110 11112


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|++|++.+.++++       .+|.+||+|+...
T Consensus        57 ~~~~v~~Dl~d~~~~~~~~~-------~~d~ViH~A~~~~   89 (351)
T PLN02650         57 RLTLWKADLAVEGSFDDAIR-------GCTGVFHVATPMD   89 (351)
T ss_pred             ceEEEEecCCChhhHHHHHh-------CCCEEEEeCCCCC
Confidence            57788999999999888776       5899999998654

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.22  E-value=1e-10  Score=85.59  Aligned_cols=84  Identities=19%  Similarity=0.226  Sum_probs=59.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEE-EeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVI-GFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++||||++|+||.++++.|+++|+.++ +++|.....                            . ...+........
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~----------------------------~-~~~~~~~~~~~~   52 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAG----------------------------N-LMSLAPVAQSER   52 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCcccc----------------------------c-hhhhhhcccCCc
Confidence            7899999999999999999999998755 444432211                            0 011111011125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|.+++.++++.     .++|.|||+||...
T Consensus        53 ~~~~~~Dl~d~~~~~~~~~~-----~~~D~Vih~A~~~~   86 (355)
T PRK10217         53 FAFEKVDICDRAELARVFTE-----HQPDCVMHLAAESH   86 (355)
T ss_pred             eEEEECCCcChHHHHHHHhh-----cCCCEEEECCcccC
Confidence            67789999999999888875     26999999999764

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.20  E-value=1.6e-10  Score=87.46  Aligned_cols=102  Identities=15%  Similarity=0.059  Sum_probs=64.0

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++|||||+|+||++++++|+++|++|++++|............          +. ...........+..... ...
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~----------~~-~~~~~~~~~~l~~~~~~-~~~  113 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGL----------DS-LTPIASIHERVRRWKEV-SGK  113 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccc----------cc-cccccchHHHHHHHHHh-hCC
Confidence            3689999999999999999999999999999876422110000000          00 00000000001111111 112


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++.++.+|++|++.+.++++..     ++|.|||+|+..
T Consensus       114 ~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~  147 (442)
T PLN02572        114 EIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQR  147 (442)
T ss_pred             cceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCcc
Confidence            5778899999999999998863     699999999764

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.19  E-value=8e-11  Score=81.95  Aligned_cols=80  Identities=15%  Similarity=0.322  Sum_probs=62.5

Q ss_pred             EEEEecC-CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGA-SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~-~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +-.||.. ++|||+++|++|+++|++|+++++... .                               .    ...    
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l-------------------------------~----~~~----   55 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L-------------------------------K----PEP----   55 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c-------------------------------c----ccc----
Confidence            4455655 568999999999999999999876311 0                               0    000    


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                       .+.+|+.+.+++.++++.+.+.++++|+||||||+..+.|+
T Consensus        56 -~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~   96 (227)
T TIGR02114        56 -HPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPV   96 (227)
T ss_pred             -CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccch
Confidence             13589999999999999999999999999999998776553

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.17  E-value=3.4e-10  Score=82.23  Aligned_cols=84  Identities=21%  Similarity=0.257  Sum_probs=61.9

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||.++++.|+++|++|++++|......                           .....+.. ..+.++.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~---------------------------~~~~~~~~-~~~~~~~   53 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR---------------------------SVLPVIER-LGGKHPT   53 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchH---------------------------hHHHHHHH-hcCCCce
Confidence            6899999999999999999999999999877533221                           00011111 1122456


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.+|++|++.+.++++.     .++|+|||+||...
T Consensus        54 ~~~~Dl~d~~~~~~~~~~-----~~~d~vvh~a~~~~   85 (338)
T PRK10675         54 FVEGDIRNEALLTEILHD-----HAIDTVIHFAGLKA   85 (338)
T ss_pred             EEEccCCCHHHHHHHHhc-----CCCCEEEECCcccc
Confidence            788999999998888764     37999999998764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.17  E-value=2e-10  Score=85.61  Aligned_cols=87  Identities=22%  Similarity=0.203  Sum_probs=64.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||+.++++|+++|++|+++.|+.......                         ..........  ..
T Consensus        60 ~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~-------------------------~~~~~~~~~~--~~  112 (390)
T PLN02657         60 DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGK-------------------------NGKEDTKKEL--PG  112 (390)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhcccc-------------------------chhhHHhhhc--CC
Confidence            67899999999999999999999999999999986532100                         0001111111  15


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCccc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV  118 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~  118 (125)
                      +.++.+|++|++++.++++...   .++|+||||++.
T Consensus       113 v~~v~~Dl~d~~~l~~~~~~~~---~~~D~Vi~~aa~  146 (390)
T PLN02657        113 AEVVFGDVTDADSLRKVLFSEG---DPVDVVVSCLAS  146 (390)
T ss_pred             ceEEEeeCCCHHHHHHHHHHhC---CCCcEEEECCcc
Confidence            6788999999999999887531   169999999875

>PLN02686 cinnamoyl-CoA reductase

Probab=99.16  E-value=2.9e-10  Score=84.11  Aligned_cols=83  Identities=19%  Similarity=0.211  Sum_probs=60.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc----C
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE----N   77 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~   77 (125)
                      +|+++|||++++||.+++++|+++|++|+++.|+.+....                            +..+...    .
T Consensus        53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~----------------------------l~~l~~~~~~~~  104 (367)
T PLN02686         53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEK----------------------------LREMEMFGEMGR  104 (367)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----------------------------HHHHhhhccccc
Confidence            7899999999999999999999999999988887543210                            0111100    0


Q ss_pred             CCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          78 PDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        78 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ....+.++.+|++|.+++.++++.       +|.+||.++..
T Consensus       105 ~~~~~~~v~~Dl~d~~~l~~~i~~-------~d~V~hlA~~~  139 (367)
T PLN02686        105 SNDGIWTVMANLTEPESLHEAFDG-------CAGVFHTSAFV  139 (367)
T ss_pred             cCCceEEEEcCCCCHHHHHHHHHh-------ccEEEecCeee
Confidence            012467889999999999888873       67777777654

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.15  E-value=4.1e-10  Score=82.57  Aligned_cols=85  Identities=19%  Similarity=0.253  Sum_probs=62.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc---CC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE---NP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   78 (125)
                      +++++||||+|.||..++++|+++|++|++++|.......                           ........   ..
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~---------------------------~~~~~~~~~~~~~   67 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQH---------------------------NLDDVRTSVSEEQ   67 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchh---------------------------hhhhhhhcccccc
Confidence            5789999999999999999999999999999986542200                           00111000   01


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..++.++.+|+.|.+.+..+++       .+|+|||.|+...
T Consensus        68 ~~~~~~~~~Di~d~~~l~~~~~-------~~d~ViHlAa~~~  102 (348)
T PRK15181         68 WSRFIFIQGDIRKFTDCQKACK-------NVDYVLHQAALGS  102 (348)
T ss_pred             CCceEEEEccCCCHHHHHHHhh-------CCCEEEECccccC
Confidence            1257788999999988887776       4899999999754

>PLN02427 UDP-apiose/xylose synthase

Probab=99.13  E-value=5e-10  Score=83.07  Aligned_cols=80  Identities=18%  Similarity=0.256  Sum_probs=61.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc---CC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE---NP   78 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   78 (125)
                      ++++||||+|.||..+++.|+++ |++|++++|+....                               ..+...   ..
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~-------------------------------~~l~~~~~~~~   63 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKI-------------------------------KHLLEPDTVPW   63 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhh-------------------------------hhhhccccccC
Confidence            57999999999999999999998 59999999875432                               111100   00


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..++.++.+|++|.+.+.++++       .+|+|||+|+...
T Consensus        64 ~~~~~~~~~Dl~d~~~l~~~~~-------~~d~ViHlAa~~~   98 (386)
T PLN02427         64 SGRIQFHRINIKHDSRLEGLIK-------MADLTINLAAICT   98 (386)
T ss_pred             CCCeEEEEcCCCChHHHHHHhh-------cCCEEEEcccccC
Confidence            1257889999999999888776       4899999999754

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.11  E-value=6.8e-10  Score=84.91  Aligned_cols=88  Identities=20%  Similarity=0.300  Sum_probs=71.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ||+++||||+|.||..+++++++.+. ++++++|++-+..                           ..-+++....+..
T Consensus       250 gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~---------------------------~i~~el~~~~~~~  302 (588)
T COG1086         250 GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLY---------------------------LIDMELREKFPEL  302 (588)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHH---------------------------HHHHHHHhhCCCc
Confidence            89999999999999999999999986 7888999876542                           2224444443445


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +..++.+|+.|.+.+.++++..     ++|+++|.|++-+-
T Consensus       303 ~~~~~igdVrD~~~~~~~~~~~-----kvd~VfHAAA~KHV  338 (588)
T COG1086         303 KLRFYIGDVRDRDRVERAMEGH-----KVDIVFHAAALKHV  338 (588)
T ss_pred             ceEEEecccccHHHHHHHHhcC-----CCceEEEhhhhccC
Confidence            7899999999999999999963     79999999987653

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=99.11  E-value=5.4e-10  Score=83.47  Aligned_cols=80  Identities=25%  Similarity=0.409  Sum_probs=62.3

Q ss_pred             CcEEEEecC---------------Ccc-hHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccc
Q psy7029           2 SKIIVVTGA---------------SVG-IGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR   65 (125)
Q Consensus         2 ~~~~lItG~---------------~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (125)
                      ||+++||||               ++| +|++++++|+++|++|++++++.+ .                          
T Consensus       188 gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~--------------------------  240 (399)
T PRK05579        188 GKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-L--------------------------  240 (399)
T ss_pred             CCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-c--------------------------
Confidence            789999999               455 999999999999999999988642 1                          


Q ss_pred             hHhHHHHHhhcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          66 RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                           +    ...  .  ...+|+++.+++.+.++   +.++++|++|||||+..+.|.
T Consensus       241 -----~----~~~--~--~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~~~  283 (399)
T PRK05579        241 -----P----TPA--G--VKRIDVESAQEMLDAVL---AALPQADIFIMAAAVADYRPA  283 (399)
T ss_pred             -----c----CCC--C--cEEEccCCHHHHHHHHH---HhcCCCCEEEEcccccccccc
Confidence                 0    000  1  23679999888777665   457899999999999877653

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.10  E-value=9.9e-10  Score=80.34  Aligned_cols=83  Identities=19%  Similarity=0.234  Sum_probs=59.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++||||+|+||.++++.|+++|+. |+.+++......                          .   ..+.......++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--------------------------~---~~~~~~~~~~~~   52 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--------------------------L---ESLADVSDSERY   52 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--------------------------H---HHHHhcccCCce
Confidence            6899999999999999999999976 555555321100                          0   111111112256


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|.+++.++++.     .++|++||+||...
T Consensus        53 ~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~   85 (352)
T PRK10084         53 VFEHADICDRAELDRIFAQ-----HQPDAVMHLAAESH   85 (352)
T ss_pred             EEEEecCCCHHHHHHHHHh-----cCCCEEEECCcccC
Confidence            7789999999999998875     37999999999764

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.10  E-value=7.6e-10  Score=80.19  Aligned_cols=74  Identities=19%  Similarity=0.324  Sum_probs=59.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++||||+|.+|++++++|+++|++|+++.|+.+..                               ..+..    ..+.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-------------------------------~~l~~----~~v~   46 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-------------------------------SFLKE----WGAE   46 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-------------------------------hhHhh----cCCE
Confidence            689999999999999999999999999999985422                               11111    1467


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++.+|++|++++.++++       ++|++||+++..
T Consensus        47 ~v~~Dl~d~~~l~~al~-------g~d~Vi~~~~~~   75 (317)
T CHL00194         47 LVYGDLSLPETLPPSFK-------GVTAIIDASTSR   75 (317)
T ss_pred             EEECCCCCHHHHHHHHC-------CCCEEEECCCCC
Confidence            78999999999887776       589999987644

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.09  E-value=6.2e-10  Score=80.22  Aligned_cols=75  Identities=21%  Similarity=0.254  Sum_probs=60.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||++|+||..+++.|+++|++|++++|+....                               ..+    ....+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------------------------~~~----~~~~~   45 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR-------------------------------RNL----EGLDV   45 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc-------------------------------ccc----ccCCc
Confidence            3689999999999999999999999999999976432                               111    11146


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .++.+|++|++++.++++       .+|++||+|+..
T Consensus        46 ~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~   75 (328)
T TIGR03466        46 EIVEGDLRDPASLRKAVA-------GCRALFHVAADY   75 (328)
T ss_pred             eEEEeeCCCHHHHHHHHh-------CCCEEEEeceec
Confidence            788999999999888776       589999999764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.09  E-value=1.4e-09  Score=78.12  Aligned_cols=84  Identities=15%  Similarity=0.183  Sum_probs=60.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||++++++|+++|++|+++.|+......                         .+....+..  ...+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~-------------------------~~~~~~l~~--~~~~   58 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEI-------------------------EKEIRGLSC--EEER   58 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhH-------------------------HHHHHhccc--CCCc
Confidence            5789999999999999999999999999999986432100                         011111111  1225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|++|.+++.+++.       .+|.++|.++..
T Consensus        59 ~~~~~~Dl~d~~~~~~~l~-------~~d~v~~~~~~~   89 (297)
T PLN02583         59 LKVFDVDPLDYHSILDALK-------GCSGLFCCFDPP   89 (297)
T ss_pred             eEEEEecCCCHHHHHHHHc-------CCCEEEEeCccC
Confidence            7788999999999877665       588888866543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.09  E-value=1.1e-09  Score=76.94  Aligned_cols=80  Identities=28%  Similarity=0.377  Sum_probs=58.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||+.+++.|+++|++|+++.|+.+..                               ......  ...
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------------------------------~~~~~~--~~~   63 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKA-------------------------------KTSLPQ--DPS   63 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHH-------------------------------HHhccc--CCc
Confidence            47899999999999999999999999999999986533                               111111  125


Q ss_pred             eeEEEecCCCh-HHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKD-AEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+++. +.+.+.+.      .++|+||+|+|...
T Consensus        64 ~~~~~~Dl~d~~~~l~~~~~------~~~d~vi~~~g~~~   97 (251)
T PLN00141         64 LQIVRADVTEGSDKLVEAIG------DDSDAVICATGFRR   97 (251)
T ss_pred             eEEEEeeCCCCHHHHHHHhh------cCCCEEEECCCCCc
Confidence            77889999984 33333221      26999999998753

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.08  E-value=1.5e-09  Score=72.39  Aligned_cols=72  Identities=26%  Similarity=0.359  Sum_probs=61.7

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      ++|+||+|.+|+.+++.|+++|++|+++.|++++.                               +.      ...+..
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~-------------------------------~~------~~~~~~   43 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKA-------------------------------ED------SPGVEI   43 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGH-------------------------------HH------CTTEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhc-------------------------------cc------cccccc
Confidence            58999999999999999999999999999998755                               22      226889


Q ss_pred             EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          85 LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        85 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.+|+.|++++.+.++       ++|.+|+++|...
T Consensus        44 ~~~d~~d~~~~~~al~-------~~d~vi~~~~~~~   72 (183)
T PF13460_consen   44 IQGDLFDPDSVKAALK-------GADAVIHAAGPPP   72 (183)
T ss_dssp             EESCTTCHHHHHHHHT-------TSSEEEECCHSTT
T ss_pred             ceeeehhhhhhhhhhh-------hcchhhhhhhhhc
Confidence            9999999988888777       6999999987543

...

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.07  E-value=1.4e-09  Score=78.07  Aligned_cols=82  Identities=24%  Similarity=0.292  Sum_probs=61.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||..+++.|+++|++|++++|......                           ........ .  ..+.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~---------------------------~~~~~~~~-~--~~~~   50 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSP---------------------------EALKRGER-I--TRVT   50 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccch---------------------------hhhhhhcc-c--cceE
Confidence            3789999999999999999999999998876433210                           00011111 1  1467


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.+|+++++++.++++.     +++|++|||||...
T Consensus        51 ~~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~~~   82 (328)
T TIGR01179        51 FVEGDLRDRELLDRLFEE-----HKIDAVIHFAGLIA   82 (328)
T ss_pred             EEECCCCCHHHHHHHHHh-----CCCcEEEECccccC
Confidence            789999999999888874     47999999999764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.07  E-value=1.1e-09  Score=78.41  Aligned_cols=83  Identities=19%  Similarity=0.188  Sum_probs=60.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           4 IIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++|||++|+||.+++++|+++|  ++|++++|......                          ....+.+.   ...+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~--------------------------~~~~~~~~---~~~~   51 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN--------------------------LENLADLE---DNPR   51 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh--------------------------hhhhhhhc---cCCC
Confidence            37999999999999999999987  68888876432110                          00011111   1125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++..     ++|+|||+|+...
T Consensus        52 ~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~   85 (317)
T TIGR01181        52 YRFVKGDIGDRELVSRLFTEH-----QPDAVVHFAAESH   85 (317)
T ss_pred             cEEEEcCCcCHHHHHHHHhhc-----CCCEEEEcccccC
Confidence            677899999999998888752     5999999999764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.06  E-value=5.3e-10  Score=80.05  Aligned_cols=77  Identities=23%  Similarity=0.290  Sum_probs=59.7

Q ss_pred             EEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           6 VVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         6 lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      |||||+|.+|.+++++|+++|  +.|.++++......                             ...+. ...  ...
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~-----------------------------~~~~~-~~~--~~~   48 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF-----------------------------LKDLQ-KSG--VKE   48 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc-----------------------------chhhh-ccc--cee
Confidence            699999999999999999999  78988888765320                             01111 111  233


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++.+|++|++++.++++       .+|++||+|+....
T Consensus        49 ~~~~Di~d~~~l~~a~~-------g~d~V~H~Aa~~~~   79 (280)
T PF01073_consen   49 YIQGDITDPESLEEALE-------GVDVVFHTAAPVPP   79 (280)
T ss_pred             EEEeccccHHHHHHHhc-------CCceEEEeCccccc
Confidence            88999999999999998       68999999997654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>KOG1371|consensus

Probab=99.05  E-value=1.6e-09  Score=78.02  Aligned_cols=89  Identities=18%  Similarity=0.190  Sum_probs=69.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |++.+|||||++.||.+.+.+|.++|+.|+++++-......+                        -+..+.+..+  +.
T Consensus         1 ~~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~s------------------------l~r~~~l~~~--~~   54 (343)
T KOG1371|consen    1 GGKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLES------------------------LKRVRQLLGE--GK   54 (343)
T ss_pred             CCcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhH------------------------HHHHHHhcCC--CC
Confidence            578999999999999999999999999999999865433111                        1111222222  34


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+.++..|++|.+.++++|+..     ++|.++|-|+.-.
T Consensus        55 ~v~f~~~Dl~D~~~L~kvF~~~-----~fd~V~Hfa~~~~   89 (343)
T KOG1371|consen   55 SVFFVEGDLNDAEALEKLFSEV-----KFDAVMHFAALAA   89 (343)
T ss_pred             ceEEEEeccCCHHHHHHHHhhc-----CCceEEeehhhhc
Confidence            7899999999999999999975     6999999988755

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.04  E-value=5.1e-10  Score=80.14  Aligned_cols=84  Identities=24%  Similarity=0.357  Sum_probs=54.1

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce--
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK--   81 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   81 (125)
                      +|||||+|.||..++++|++.+. .++++++++.....                           .-+++....+..+  
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~---------------------------l~~~l~~~~~~~~v~   53 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYE---------------------------LERELRSRFPDPKVR   53 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHH---------------------------HHHHCHHHC--TTCE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHH---------------------------HHHHHhhcccccCcc
Confidence            68999999999999999999985 89999999876521                           1133322222212  


Q ss_pred             --eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 --VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 --~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                        +.++.+|++|.+.+.+++++.     ++|+++|.|++-+
T Consensus        54 ~~~~~vigDvrd~~~l~~~~~~~-----~pdiVfHaAA~Kh   89 (293)
T PF02719_consen   54 FEIVPVIGDVRDKERLNRIFEEY-----KPDIVFHAAALKH   89 (293)
T ss_dssp             EEEE--CTSCCHHHHHHHHTT-------T-SEEEE------
T ss_pred             cccCceeecccCHHHHHHHHhhc-----CCCEEEEChhcCC
Confidence              345688999999999998863     8999999998754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.01  E-value=3e-09  Score=77.80  Aligned_cols=77  Identities=14%  Similarity=0.256  Sum_probs=57.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|||++|.||..+++.|++. |++|++++|+....                               ..+.   ....
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~-------------------------------~~~~---~~~~   47 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL-------------------------------GDLV---NHPR   47 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH-------------------------------HHhc---cCCC
Confidence            67999999999999999999986 69999999865322                               1111   1125


Q ss_pred             eeEEEecCC-ChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVT-KDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++ +.+.+.++++       ++|+|||+|+...
T Consensus        48 ~~~~~~Dl~~~~~~~~~~~~-------~~d~ViH~aa~~~   80 (347)
T PRK11908         48 MHFFEGDITINKEWIEYHVK-------KCDVILPLVAIAT   80 (347)
T ss_pred             eEEEeCCCCCCHHHHHHHHc-------CCCEEEECcccCC
Confidence            778889998 6666655544       5899999998754

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.01  E-value=4.6e-09  Score=72.33  Aligned_cols=76  Identities=32%  Similarity=0.451  Sum_probs=62.7

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      ++||||+|.||.+++++|+++|+.|+.+.|+......                             ....  .   .+.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~-----------------------------~~~~--~---~~~~   46 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESF-----------------------------EEKK--L---NVEF   46 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHH-----------------------------HHHH--T---TEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccc-----------------------------cccc--c---eEEE
Confidence            6899999999999999999999999988887653310                             1111  1   5778


Q ss_pred             EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          85 LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        85 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.+|+.|.+.+.++++..     .+|.+||+|+..
T Consensus        47 ~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~   76 (236)
T PF01370_consen   47 VIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFS   76 (236)
T ss_dssp             EESETTSHHHHHHHHHHH-----TESEEEEEBSSS
T ss_pred             EEeecccccccccccccc-----CceEEEEeeccc
Confidence            899999999999999975     799999999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.95  E-value=6.5e-09  Score=74.37  Aligned_cols=79  Identities=23%  Similarity=0.270  Sum_probs=64.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|||||+|-||.+++.+|++.|++|+++++-.....                              ..+...    ..
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~------------------------------~~v~~~----~~   46 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHK------------------------------IALLKL----QF   46 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCH------------------------------HHhhhc----cC
Confidence            47899999999999999999999999999998644320                              111110    15


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+++.|+.|.+.+.++|++     .++|.++|-||...
T Consensus        47 ~f~~gDi~D~~~L~~vf~~-----~~idaViHFAa~~~   79 (329)
T COG1087          47 KFYEGDLLDRALLTAVFEE-----NKIDAVVHFAASIS   79 (329)
T ss_pred             ceEEeccccHHHHHHHHHh-----cCCCEEEECccccc
Confidence            7899999999999999998     48999999999765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.92  E-value=1.1e-08  Score=80.92  Aligned_cols=85  Identities=15%  Similarity=0.142  Sum_probs=61.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc--CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK--GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++|||||+|+||.+++++|+++  +++|++++|......                             ...+......
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~-----------------------------~~~l~~~~~~   56 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSN-----------------------------LKNLNPSKSS   56 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccch-----------------------------hhhhhhcccC
Confidence            578999999999999999999998  678998887531110                             0111111112


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++.+|++|++.+.+++..     .++|+|||+|+...
T Consensus        57 ~~v~~~~~Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~   92 (668)
T PLN02260         57 PNFKFVKGDIASADLVNYLLIT-----EGIDTIMHFAAQTH   92 (668)
T ss_pred             CCeEEEECCCCChHHHHHHHhh-----cCCCEEEECCCccC
Confidence            2577889999999887766543     37999999999865

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.91  E-value=1.2e-08  Score=76.15  Aligned_cols=80  Identities=24%  Similarity=0.386  Sum_probs=61.5

Q ss_pred             CcEEEEecC---------------Ccc-hHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccc
Q psy7029           2 SKIIVVTGA---------------SVG-IGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR   65 (125)
Q Consensus         2 ~~~~lItG~---------------~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (125)
                      ||+++||||               ++| +|.+++++|..+|++|+++.+.....                          
T Consensus       185 ~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--------------------------  238 (390)
T TIGR00521       185 GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--------------------------  238 (390)
T ss_pred             CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--------------------------
Confidence            789999999               567 99999999999999999988764311                          


Q ss_pred             hHhHHHHHhhcCCCceeeEEEecCCChHHH-HHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          66 RAEMIDAMAKENPDWKVHSLKVDVTKDAEV-VEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v-~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                                ...  .  ...+|+.+.+++ .+++++   .++++|++|+|||+..+.|.
T Consensus       239 ----------~~~--~--~~~~~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       239 ----------TPP--G--VKSIKVSTAEEMLEAALNE---LAKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             ----------CCC--C--cEEEEeccHHHHHHHHHHh---hcccCCEEEEcccccccccc
Confidence                      111  1  245799999888 555544   35789999999999988764

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.90  E-value=1e-08  Score=81.06  Aligned_cols=78  Identities=15%  Similarity=0.233  Sum_probs=59.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++||||+|.||.+++++|+++ |++|++++|.....                               ....   ...
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~-------------------------------~~~~---~~~  360 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI-------------------------------SRFL---GHP  360 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh-------------------------------hhhc---CCC
Confidence            578999999999999999999985 79999999875422                               1111   112


Q ss_pred             eeeEEEecCCChHH-HHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAE-VVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~-v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+.++.+|++|.+. +.++++       ++|++||+|+...
T Consensus       361 ~~~~~~gDl~d~~~~l~~~l~-------~~D~ViHlAa~~~  394 (660)
T PRK08125        361 RFHFVEGDISIHSEWIEYHIK-------KCDVVLPLVAIAT  394 (660)
T ss_pred             ceEEEeccccCcHHHHHHHhc-------CCCEEEECccccC
Confidence            56778899998765 344443       6999999999765

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.89  E-value=1.1e-08  Score=75.77  Aligned_cols=76  Identities=22%  Similarity=0.164  Sum_probs=58.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++|.||.++++.|.++|++|++++|......                              ..     ....
T Consensus        21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------------------------------~~-----~~~~   65 (370)
T PLN02695         21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------------------------------SE-----DMFC   65 (370)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------------------------------cc-----cccc
Confidence            578999999999999999999999999999998643110                              00     0002


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ..++.+|+++.+.+..+++       ++|+|||+|+..
T Consensus        66 ~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~   96 (370)
T PLN02695         66 HEFHLVDLRVMENCLKVTK-------GVDHVFNLAADM   96 (370)
T ss_pred             ceEEECCCCCHHHHHHHHh-------CCCEEEEccccc
Confidence            3567889999888776664       589999999865

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.88  E-value=7.3e-09  Score=74.57  Aligned_cols=66  Identities=26%  Similarity=0.328  Sum_probs=54.6

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      ++||||++|.||.+++++|+++| +|++++|...                                              
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------------------------------   34 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------------------------------------   34 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------------------------------
Confidence            68999999999999999999999 7888876421                                              


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .+..|++|.+.+.++++..     ++|++||+|+....
T Consensus        35 ~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~Aa~~~~   67 (299)
T PRK09987         35 DYCGDFSNPEGVAETVRKI-----RPDVIVNAAAHTAV   67 (299)
T ss_pred             cccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCc
Confidence            1356999999998888852     58999999998653

>PRK05865 hypothetical protein; Provisional

Probab=98.85  E-value=2.1e-08  Score=80.98  Aligned_cols=71  Identities=31%  Similarity=0.392  Sum_probs=59.0

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||.++++.|+++|++|++++|+....                                 .    . ..+.
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---------------------------------~----~-~~v~   43 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---------------------------------W----P-SSAD   43 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---------------------------------c----c-cCce
Confidence            689999999999999999999999999999874311                                 0    0 1456


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++.+|++|.+++.++++       .+|++||+|+..
T Consensus        44 ~v~gDL~D~~~l~~al~-------~vD~VVHlAa~~   72 (854)
T PRK05865         44 FIAADIRDATAVESAMT-------GADVVAHCAWVR   72 (854)
T ss_pred             EEEeeCCCHHHHHHHHh-------CCCEEEECCCcc
Confidence            78999999999888776       589999999864

>KOG1204|consensus

Probab=98.84  E-value=1.9e-09  Score=74.24  Aligned_cols=92  Identities=22%  Similarity=0.292  Sum_probs=66.5

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |++++|+||+++|||..++..+..++-.....++.....+                             .+.+...++ .
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-----------------------------~~~L~v~~g-d   54 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-----------------------------LEGLKVAYG-D   54 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-----------------------------ccceEEEec-C
Confidence            5789999999999999998888877754444333322110                             122222222 2


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      .......|++....+..+++..+.+.++.|++|||||..++.
T Consensus        55 ~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdv   96 (253)
T KOG1204|consen   55 DFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDV   96 (253)
T ss_pred             CcceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccch
Confidence            444567788888889999999999999999999999998764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.81  E-value=3.9e-08  Score=71.59  Aligned_cols=89  Identities=20%  Similarity=0.259  Sum_probs=57.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh---cCC
Q psy7029           4 IIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK---ENP   78 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~   78 (125)
                      +++|||++|+||.++++.|+++|  ++|+++.|+.........+...                     .+....   ...
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~---------------------~~~~~~~~~~~~   59 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREA---------------------LRSYRLWQEDLA   59 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHH---------------------HHHhCCCCchhh
Confidence            47999999999999999999998  7899999976532111111100                     000000   000


Q ss_pred             CceeeEEEecCCCh------HHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKD------AEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..++..+.+|++++      +....+.       ..+|++||||+...
T Consensus        60 ~~~v~~~~~D~~~~~~gl~~~~~~~~~-------~~~d~vih~a~~~~  100 (367)
T TIGR01746        60 RERIEVVAGDLSEPRLGLSDAEWERLA-------ENVDTIVHNGALVN  100 (367)
T ss_pred             hCCEEEEeCCcCcccCCcCHHHHHHHH-------hhCCEEEeCCcEec
Confidence            02688889999865      2333322       37999999999765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.78  E-value=1.4e-08  Score=73.07  Aligned_cols=77  Identities=23%  Similarity=0.341  Sum_probs=51.4

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      ++||||+|.||++++++|++.|++++++.|+.....                              . .        ...
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~------------------------------~-~--------~~~   42 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT------------------------------K-F--------VNL   42 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcch------------------------------H-H--------Hhh
Confidence            689999999999999999999997776655432110                              0 0        011


Q ss_pred             EEecCCChHHHHHHHHHHHh--hcCCccEEEeCcccCC
Q psy7029          85 LKVDVTKDAEVVEAFDWINN--KFGHIDVMINNAGVNE  120 (125)
Q Consensus        85 ~~~Dv~~~~~v~~~~~~~~~--~~g~id~lv~nag~~~  120 (125)
                      ..+|+.|..+...+++.+..  .++++|++||+||...
T Consensus        43 ~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~   80 (308)
T PRK11150         43 VDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSS   80 (308)
T ss_pred             hhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecC
Confidence            23466665555555554432  3457999999998644

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.77  E-value=3.6e-08  Score=70.59  Aligned_cols=75  Identities=29%  Similarity=0.350  Sum_probs=59.6

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      .+||||++|.||..++++|.++|++|+.++|......                               ...     ..+.
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~-------------------------------~~~-----~~~~   45 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD-------------------------------PLL-----SGVE   45 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccc-------------------------------ccc-----cccc
Confidence            3899999999999999999999999999999766431                               000     2567


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCc-cEEEeCcccCCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHI-DVMINNAGVNEF  121 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~i-d~lv~nag~~~~  121 (125)
                      ++.+|+++.+.+...++.       . |.+||+|+....
T Consensus        46 ~~~~d~~~~~~~~~~~~~-------~~d~vih~aa~~~~   77 (314)
T COG0451          46 FVVLDLTDRDLVDELAKG-------VPDAVIHLAAQSSV   77 (314)
T ss_pred             eeeecccchHHHHHHHhc-------CCCEEEEccccCch
Confidence            788999998666665553       3 999999998864

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.77  E-value=7.1e-08  Score=69.43  Aligned_cols=84  Identities=20%  Similarity=0.288  Sum_probs=56.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|+|+ ||+|++++..|++.|++ |++++|+.+.....                        ++..+.+.....  
T Consensus       126 ~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a------------------------~~l~~~l~~~~~--  178 (289)
T PRK12548        126 GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERA------------------------EQTAEKIKQEVP--  178 (289)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHH------------------------HHHHHHHhhcCC--
Confidence            689999998 69999999999999996 99999986311000                        111122222111  


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .+....+|+.+.+++...++       ..|+||||..+.
T Consensus       179 ~~~~~~~d~~~~~~~~~~~~-------~~DilINaTp~G  210 (289)
T PRK12548        179 ECIVNVYDLNDTEKLKAEIA-------SSDILVNATLVG  210 (289)
T ss_pred             CceeEEechhhhhHHHhhhc-------cCCEEEEeCCCC
Confidence            33455678887777665554       469999988654

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.75  E-value=3.8e-08  Score=70.64  Aligned_cols=77  Identities=17%  Similarity=0.249  Sum_probs=54.5

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      ++|||++|.||.++++.|.++|+ .|++++|..+..                             .+..+       ...
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-----------------------------~~~~~-------~~~   44 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-----------------------------KFLNL-------ADL   44 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-----------------------------hhhhh-------hhe
Confidence            58999999999999999999997 788887754311                             00111       012


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+..|+.+++.+..+.+.   .+.++|++||+|+...
T Consensus        45 ~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~   78 (314)
T TIGR02197        45 VIADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSD   78 (314)
T ss_pred             eeeccCcchhHHHHHHhh---ccCCCCEEEECccccC
Confidence            356788887776665542   3458999999999753

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.73  E-value=9.8e-08  Score=75.11  Aligned_cols=84  Identities=23%  Similarity=0.229  Sum_probs=56.6

Q ss_pred             EEEEecCCcchHHHHHHHHH--HcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           4 IIVVTGASVGIGAAILRALA--AKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~--~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++||||+|.||.++++.|+  +.|++|++++|+.....                             ...+.......+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~-----------------------------~~~~~~~~~~~~   52 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR-----------------------------LEALAAYWGADR   52 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH-----------------------------HHHHHHhcCCCc
Confidence            68999999999999999999  57999999999643210                             011111111126


Q ss_pred             eeEEEecCCChHHH--HHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEV--VEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v--~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++..  ...++.+    ..+|++||+||...
T Consensus        53 v~~~~~Dl~~~~~~~~~~~~~~l----~~~D~Vih~Aa~~~   89 (657)
T PRK07201         53 VVPLVGDLTEPGLGLSEADIAEL----GDIDHVVHLAAIYD   89 (657)
T ss_pred             EEEEecccCCccCCcCHHHHHHh----cCCCEEEECceeec
Confidence            78889999985310  1111221    37999999999754

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.73  E-value=3.5e-08  Score=70.27  Aligned_cols=34  Identities=24%  Similarity=0.282  Sum_probs=31.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +++|||++|.+|..++++|+++|++|.++.|+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~   34 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSS   34 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCc
Confidence            3789999999999999999999999999999875

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.71  E-value=1.3e-07  Score=65.94  Aligned_cols=34  Identities=26%  Similarity=0.421  Sum_probs=27.6

Q ss_pred             cEEEEecCCcc-hHHHHHHHHHHcCCeEEEeecCc
Q psy7029           3 KIIVVTGASVG-IGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~g-iG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      .+-.||+.++| +|++++++|+++|++|+++.|..
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~   50 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKT   50 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcc
Confidence            34566666555 99999999999999999998753

>PLN02503 fatty acyl-CoA reductase 2

Probab=98.69  E-value=3.4e-07  Score=71.74  Aligned_cols=98  Identities=18%  Similarity=0.224  Sum_probs=61.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC---eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH---QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      +|+++||||+|.||..+++.|++.+.   +|+++.|........+.+......               ...++.+.+..+
T Consensus       119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~---------------~~lf~~l~~~~g  183 (605)
T PLN02503        119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVID---------------AELFKCLQETHG  183 (605)
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhh---------------hhhHHHHHHhcC
Confidence            78999999999999999999998753   689998865433222222111000               011111111111


Q ss_pred             -------CceeeEEEecCCCh------HHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          79 -------DWKVHSLKVDVTKD------AEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        79 -------~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                             ..++.++.+|++++      +....+.+       .+|+|||+|+...+
T Consensus       184 ~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f  232 (605)
T PLN02503        184 KSYQSFMLSKLVPVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF  232 (605)
T ss_pred             ccccccccccEEEEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc
Confidence                   23688999999987      23333332       59999999998764

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.68  E-value=1e-07  Score=72.32  Aligned_cols=77  Identities=18%  Similarity=0.186  Sum_probs=54.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|.||..++++|+++|++|++++|......                              +.........+
T Consensus       119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~------------------------------~~~~~~~~~~~  168 (442)
T PLN02206        119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRK------------------------------ENVMHHFSNPN  168 (442)
T ss_pred             CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccch------------------------------hhhhhhccCCc
Confidence            478999999999999999999999999999987532110                              00000111224


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++..|+.++.     +       ..+|.|||+|+...
T Consensus       169 ~~~i~~D~~~~~-----l-------~~~D~ViHlAa~~~  195 (442)
T PLN02206        169 FELIRHDVVEPI-----L-------LEVDQIYHLACPAS  195 (442)
T ss_pred             eEEEECCccChh-----h-------cCCCEEEEeeeecc
Confidence            667788887652     1       25899999998654

>PRK12320 hypothetical protein; Provisional

Probab=98.68  E-value=1.2e-07  Score=75.15  Aligned_cols=71  Identities=28%  Similarity=0.348  Sum_probs=54.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|.||..++++|+++|++|++++|.....                                    .  ...+.
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------------------------------------~--~~~ve   43 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------------------------------------L--DPRVD   43 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------------------------------------c--cCCce
Confidence            689999999999999999999999999999864311                                    0  11466


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.+|++++. +.+++.       ++|++||+|+...
T Consensus        44 ~v~~Dl~d~~-l~~al~-------~~D~VIHLAa~~~   72 (699)
T PRK12320         44 YVCASLRNPV-LQELAG-------EADAVIHLAPVDT   72 (699)
T ss_pred             EEEccCCCHH-HHHHhc-------CCCEEEEcCccCc
Confidence            7889999874 444333       5899999998753

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.68  E-value=8.8e-08  Score=68.07  Aligned_cols=61  Identities=21%  Similarity=0.410  Sum_probs=52.3

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      ++|||++|+||.+++++|+++|++|+++.|+                                                 
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------------------------------------   32 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------------------------------------   32 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------------------------------------
Confidence            6999999999999999999999999988762                                                 


Q ss_pred             EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          85 LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        85 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       .+|+.+++++.++++.     ..+|.+||+||...
T Consensus        33 -~~d~~~~~~~~~~~~~-----~~~d~vi~~a~~~~   62 (287)
T TIGR01214        33 -QLDLTDPEALERLLRA-----IRPDAVVNTAAYTD   62 (287)
T ss_pred             -ccCCCCHHHHHHHHHh-----CCCCEEEECCcccc
Confidence             3588899998888875     25799999998754

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.67  E-value=2e-07  Score=65.47  Aligned_cols=93  Identities=20%  Similarity=0.280  Sum_probs=49.4

Q ss_pred             EecCCcchHHHHHHHHHHcCC--eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           7 VTGASVGIGAAILRALAAKGH--QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         7 ItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      +||++|.+|..+.++|++++.  +|+|+.|..........+......               .......... ...++..
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~---------------~~~~~~~~~~-~~~ri~~   64 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKE---------------YGLWDDLDKE-ALSRIEV   64 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-S---------------S-HHHHH-HH-HTTTEEE
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhccc---------------ccchhhhhhh-hhccEEE
Confidence            799999999999999999976  999999976432211111100000               0000011000 0238999


Q ss_pred             EEecCCChH------HHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          85 LKVDVTKDA------EVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        85 ~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.+|++++.      ....+.+       .+|++||||+...+.
T Consensus        65 v~GDl~~~~lGL~~~~~~~L~~-------~v~~IiH~Aa~v~~~  101 (249)
T PF07993_consen   65 VEGDLSQPNLGLSDEDYQELAE-------EVDVIIHCAASVNFN  101 (249)
T ss_dssp             EE--TTSGGGG--HHHHHHHHH-------H--EEEE--SS-SBS
T ss_pred             EeccccccccCCChHHhhcccc-------ccceeeecchhhhhc
Confidence            999999863      3344433       599999999987764

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02996 fatty acyl-CoA reductase

Probab=98.65  E-value=4.9e-07  Score=69.48  Aligned_cols=104  Identities=18%  Similarity=0.208  Sum_probs=60.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC---eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHH-HHHhhcC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH---QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMI-DAMAKEN   77 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   77 (125)
                      ||+++|||++|.||..+++.|++.+.   +|+++.|..........+.........        +....+.. +.+....
T Consensus        11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~--------f~~~~~~~~~~~~~~~   82 (491)
T PLN02996         11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDL--------FKVLREKLGENLNSLI   82 (491)
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchH--------HHHHHHhcchhhhhhh
Confidence            78999999999999999999998642   688998875432111111100000000        00000000 0000000


Q ss_pred             CCceeeEEEecCCC-------hHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          78 PDWKVHSLKVDVTK-------DAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        78 ~~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       ..++.++.+|+++       .+.+.++++       .+|++||+|+...+
T Consensus        83 -~~kv~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~  125 (491)
T PLN02996         83 -SEKVTPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF  125 (491)
T ss_pred             -hcCEEEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC
Confidence             1278899999984       344445544       59999999998664

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.64  E-value=2e-07  Score=70.68  Aligned_cols=35  Identities=29%  Similarity=0.353  Sum_probs=32.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      .++++|||++|.||..++++|+++|++|++++|..
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~  154 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF  154 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            36799999999999999999999999999999864

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.61  E-value=6.7e-07  Score=60.65  Aligned_cols=82  Identities=22%  Similarity=0.213  Sum_probs=57.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|+|+++++|+.+++.|++.|++|++++|+.+....                           ..+.+....   .
T Consensus        28 ~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~---------------------------l~~~l~~~~---~   77 (194)
T cd01078          28 GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQK---------------------------AADSLRARF---G   77 (194)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH---------------------------HHHHHHhhc---C
Confidence            5789999999999999999999999999999998654421                           111121111   1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .....+|..+.+++.+.++       ..|++|++.....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~-------~~diVi~at~~g~  109 (194)
T cd01078          78 EGVGAVETSDDAARAAAIK-------GADVVFAAGAAGV  109 (194)
T ss_pred             CcEEEeeCCCHHHHHHHHh-------cCCEEEECCCCCc
Confidence            2234567888887777665       5788887665443

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.61  E-value=3.1e-07  Score=68.37  Aligned_cols=78  Identities=29%  Similarity=0.317  Sum_probs=63.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +.+||.|+ |++|+.+++.|+++| .+|++.+|+.++.                               +.+...... +
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~-------------------------------~~i~~~~~~-~   48 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKC-------------------------------ARIAELIGG-K   48 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHH-------------------------------HHHHhhccc-c
Confidence            67888997 999999999999999 8999999997655                               222222222 7


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +...++|+.|.+++.+++++       .|++||++....
T Consensus        49 v~~~~vD~~d~~al~~li~~-------~d~VIn~~p~~~   80 (389)
T COG1748          49 VEALQVDAADVDALVALIKD-------FDLVINAAPPFV   80 (389)
T ss_pred             ceeEEecccChHHHHHHHhc-------CCEEEEeCCchh
Confidence            88999999999999999984       499999887654

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.61  E-value=2.6e-07  Score=66.18  Aligned_cols=84  Identities=19%  Similarity=0.204  Sum_probs=62.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.+|||||+|+||..++++++++..  +|+.++.-.=                          ......+..+   ....
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY--------------------------Agn~~~l~~~---~~~~   51 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY--------------------------AGNLENLADV---EDSP   51 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccc--------------------------cCCHHHHHhh---hcCC
Confidence            4689999999999999999998864  4677665321                          0111112222   2334


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +..++++|+.|.+.+.+++++.     .+|.++|-|+-++
T Consensus        52 ~~~fv~~DI~D~~~v~~~~~~~-----~~D~VvhfAAESH   86 (340)
T COG1088          52 RYRFVQGDICDRELVDRLFKEY-----QPDAVVHFAAESH   86 (340)
T ss_pred             CceEEeccccCHHHHHHHHHhc-----CCCeEEEechhcc
Confidence            7899999999999999999863     7999999988665

>PRK09620 hypothetical protein; Provisional

Probab=98.57  E-value=2.7e-07  Score=64.38  Aligned_cols=34  Identities=29%  Similarity=0.370  Sum_probs=31.0

Q ss_pred             CcEEEEecCC----------------cchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGAS----------------VGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~----------------~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      ||.+|||+|.                |.+|.+++++|+++|++|+++++.
T Consensus         3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            7899999876                889999999999999999998764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.56  E-value=1.9e-07  Score=66.98  Aligned_cols=63  Identities=35%  Similarity=0.473  Sum_probs=47.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++||||++|-||.++.+.|.++|+.++.+.|+                                               
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------------------------------   33 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------------------------------   33 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------------------------------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------------------------------
Confidence            378999999999999999999999999888652                                               


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                         .+|++|.+.+.++++..     ++|++||+||+..
T Consensus        34 ---~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~   63 (286)
T PF04321_consen   34 ---DLDLTDPEAVAKLLEAF-----KPDVVINCAAYTN   63 (286)
T ss_dssp             ---CS-TTSHHHHHHHHHHH-------SEEEE------
T ss_pred             ---hcCCCCHHHHHHHHHHh-----CCCeEeccceeec
Confidence               56999999999998875     6999999999864

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.55  E-value=4.4e-07  Score=64.77  Aligned_cols=90  Identities=21%  Similarity=0.259  Sum_probs=68.8

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|++||||-+|-=|..+++.|++.|+.|..+.|..+.....                        ...+..+. .....
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~------------------------ri~L~~~~-~~~~~   55 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTP------------------------RIHLYEDP-HLNDP   55 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcc------------------------cceecccc-ccCCc
Confidence            789999999999999999999999999999999875533100                        00001111 12334


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++++..+|++|...+.++++.+     .+|-++|.|+-+.
T Consensus        56 ~l~l~~gDLtD~~~l~r~l~~v-----~PdEIYNLaAQS~   90 (345)
T COG1089          56 RLHLHYGDLTDSSNLLRILEEV-----QPDEIYNLAAQSH   90 (345)
T ss_pred             eeEEEeccccchHHHHHHHHhc-----Cchhheecccccc
Confidence            6888999999999999999986     7898998887665

>PLN02778 3,5-epimerase/4-reductase

Probab=98.54  E-value=5e-07  Score=65.17  Aligned_cols=30  Identities=13%  Similarity=0.119  Sum_probs=27.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEE
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIG   31 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~   31 (125)
                      .+++||||++|.||..++++|+++|++|+.
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~   38 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHY   38 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEE
Confidence            568999999999999999999999988853

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.53  E-value=1.3e-07  Score=65.97  Aligned_cols=61  Identities=30%  Similarity=0.344  Sum_probs=48.8

Q ss_pred             HHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeEEEecCCChHHHHH
Q psy7029          18 ILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVE   97 (125)
Q Consensus        18 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   97 (125)
                      +++.|+++|++|++++|+.+..                               .         ...++++|++|.+++.+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~-------------------------------~---------~~~~~~~Dl~~~~~v~~   40 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGM-------------------------------T---------LDGFIQADLGDPASIDA   40 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchh-------------------------------h---------hhHhhcccCCCHHHHHH
Confidence            4788999999999999976422                               0         01357899999999999


Q ss_pred             HHHHHHhhcCCccEEEeCcccCCC
Q psy7029          98 AFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        98 ~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +++++.   +++|+||||||+...
T Consensus        41 ~~~~~~---~~iD~li~nAG~~~~   61 (241)
T PRK12428         41 AVAALP---GRIDALFNIAGVPGT   61 (241)
T ss_pred             HHHHhc---CCCeEEEECCCCCCC
Confidence            998864   689999999998643

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.51  E-value=7.6e-07  Score=61.71  Aligned_cols=75  Identities=21%  Similarity=0.307  Sum_probs=56.9

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      ++|+|++|.+|+.+++.|++.+++|.++.|+..+.                             ..+.+...    .+..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~-----------------------------~~~~l~~~----g~~v   47 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSD-----------------------------RAQQLQAL----GAEV   47 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHH-----------------------------HHHHHHHT----TTEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchh-----------------------------hhhhhhcc----cceE
Confidence            58999999999999999999999999999987422                             12333322    2345


Q ss_pred             EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          85 LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        85 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +..|+.|++++.++++       ++|.++.+.+..
T Consensus        48 v~~d~~~~~~l~~al~-------g~d~v~~~~~~~   75 (233)
T PF05368_consen   48 VEADYDDPESLVAALK-------GVDAVFSVTPPS   75 (233)
T ss_dssp             EES-TT-HHHHHHHHT-------TCSEEEEESSCS
T ss_pred             eecccCCHHHHHHHHc-------CCceEEeecCcc
Confidence            6899999999888888       789888877754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.48  E-value=6.8e-07  Score=63.92  Aligned_cols=62  Identities=32%  Similarity=0.447  Sum_probs=54.1

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeE
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHS   84 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (125)
                      +||||++|=+|.++.+.|. .+++|+.++|.                                                 
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~-------------------------------------------------   32 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRA-------------------------------------------------   32 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCc-------------------------------------------------
Confidence            8999999999999999988 66888877663                                                 


Q ss_pred             EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          85 LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        85 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                       .+|++|++.+.+++.+.     ++|+|||+|++....
T Consensus        33 -~~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~vD   64 (281)
T COG1091          33 -ELDITDPDAVLEVIRET-----RPDVVINAAAYTAVD   64 (281)
T ss_pred             -cccccChHHHHHHHHhh-----CCCEEEECccccccc
Confidence             17999999999999985     899999999998653

>PLN00016 RNA-binding protein; Provisional

Probab=98.48  E-value=4e-07  Score=67.57  Aligned_cols=38  Identities=29%  Similarity=0.418  Sum_probs=34.5

Q ss_pred             CCcEEEEe----cCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           1 MSKIIVVT----GASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         1 ~~~~~lIt----G~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |.++++||    |++|.||..+++.|+++|++|+++.|+...
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~   92 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP   92 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence            35789999    999999999999999999999999998653

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.47  E-value=1.2e-06  Score=65.32  Aligned_cols=76  Identities=34%  Similarity=0.431  Sum_probs=56.6

Q ss_pred             EEEecCCcchHHHHHHHHHHcC-C-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           5 IVVTGASVGIGAAILRALAAKG-H-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g-~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++|.|+ |.+|+.+++.|++++ . +|++.+|+.+..                               +.+.......++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~-------------------------------~~~~~~~~~~~~   48 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKA-------------------------------ERLAEKLLGDRV   48 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHH-------------------------------HHHHT--TTTTE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHH-------------------------------HHHHhhccccce
Confidence            588999 999999999999986 4 899999998765                               333222133478


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ...++|+.|.+++.++++       ..|++||++|..
T Consensus        49 ~~~~~d~~~~~~l~~~~~-------~~dvVin~~gp~   78 (386)
T PF03435_consen   49 EAVQVDVNDPESLAELLR-------GCDVVINCAGPF   78 (386)
T ss_dssp             EEEE--TTTHHHHHHHHT-------TSSEEEE-SSGG
T ss_pred             eEEEEecCCHHHHHHHHh-------cCCEEEECCccc
Confidence            899999999999988888       469999999865

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1430|consensus

Probab=98.46  E-value=6.8e-07  Score=65.96  Aligned_cols=83  Identities=16%  Similarity=0.183  Sum_probs=61.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +.+++||||+|.+|++++..|.+++  .++.+++..+......                            ++.. ....
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~----------------------------~e~~-~~~~   54 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLP----------------------------AELT-GFRS   54 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccc----------------------------hhhh-cccC
Confidence            5799999999999999999999998  7899998876522100                            1111 1023


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ..+.++.+|+.|...+.+.++       .+ .+||+|+...+
T Consensus        55 ~~v~~~~~D~~~~~~i~~a~~-------~~-~Vvh~aa~~~~   88 (361)
T KOG1430|consen   55 GRVTVILGDLLDANSISNAFQ-------GA-VVVHCAASPVP   88 (361)
T ss_pred             CceeEEecchhhhhhhhhhcc-------Cc-eEEEeccccCc
Confidence            478899999999999998888       45 67777765543

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.45  E-value=4.1e-07  Score=65.09  Aligned_cols=61  Identities=26%  Similarity=0.290  Sum_probs=49.7

Q ss_pred             EEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeEE
Q psy7029           6 VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSL   85 (125)
Q Consensus         6 lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (125)
                      +||||+|.||..+++.|++.|++++++.+.                                                 .
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------------------------------~   31 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------------------------------K   31 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------------------------------c
Confidence            689999999999999999999987755321                                                 1


Q ss_pred             EecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          86 KVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        86 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+|+++.+.+.++++.     .++|++||+|+...
T Consensus        32 ~~Dl~~~~~l~~~~~~-----~~~d~Vih~A~~~~   61 (306)
T PLN02725         32 ELDLTRQADVEAFFAK-----EKPTYVILAAAKVG   61 (306)
T ss_pred             cCCCCCHHHHHHHHhc-----cCCCEEEEeeeeec
Confidence            3799999998888775     26899999998743

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.39  E-value=5.4e-07  Score=63.91  Aligned_cols=34  Identities=32%  Similarity=0.489  Sum_probs=31.5

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +||||++|.||..+++.|+++|++|++++|+...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   34 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA   34 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence            5899999999999999999999999999998753

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.39  E-value=2.4e-06  Score=60.04  Aligned_cols=73  Identities=30%  Similarity=0.376  Sum_probs=58.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      .++|||+++.+|.+++++|.++|++|.+..|+.+..                               ..+.     ..+.
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~-------------------------------~~~~-----~~v~   45 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAA-------------------------------AALA-----GGVE   45 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHH-------------------------------Hhhc-----CCcE
Confidence            689999999999999999999999999999998755                               2221     2566


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ....|+.++..+...++       ++|.+++..+..
T Consensus        46 ~~~~d~~~~~~l~~a~~-------G~~~~~~i~~~~   74 (275)
T COG0702          46 VVLGDLRDPKSLVAGAK-------GVDGVLLISGLL   74 (275)
T ss_pred             EEEeccCCHhHHHHHhc-------cccEEEEEeccc
Confidence            77889999988888877       577776666644

>KOG2865|consensus

Probab=98.37  E-value=2.4e-06  Score=61.22  Aligned_cols=82  Identities=24%  Similarity=0.215  Sum_probs=65.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |-++-|.|+++++|+.++..|++.|-++++=.|..+..                              ...+.....-++
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~------------------------------~r~lkvmGdLGQ  110 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD------------------------------PRHLKVMGDLGQ  110 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc------------------------------hhheeecccccc
Confidence            56888999999999999999999999999999876532                              122222222348


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.+...|+.|+++|+++++       +-+++||..|--+
T Consensus       111 vl~~~fd~~DedSIr~vvk-------~sNVVINLIGrd~  142 (391)
T KOG2865|consen  111 VLFMKFDLRDEDSIRAVVK-------HSNVVINLIGRDY  142 (391)
T ss_pred             eeeeccCCCCHHHHHHHHH-------hCcEEEEeecccc
Confidence            9999999999999999998       5788888877543

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.36  E-value=5.9e-06  Score=61.00  Aligned_cols=93  Identities=22%  Similarity=0.219  Sum_probs=61.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||+|++|+.+.++|+.+- .+|+|..|-.........+......               ...+++   .. ..+
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~---------------~~~~~e---~~-~~r   61 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDL---------------YRHWDE---LS-ADR   61 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhh---------------hhhhhh---hh-cce
Confidence            478999999999999999998764 6999999965533222222211110               000111   11 237


Q ss_pred             eeEEEecCC------ChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVT------KDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~------~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +..+..|++      +...+.++.+       .+|.||||++...+
T Consensus        62 i~vv~gDl~e~~lGL~~~~~~~La~-------~vD~I~H~gA~Vn~  100 (382)
T COG3320          62 VEVVAGDLAEPDLGLSERTWQELAE-------NVDLIIHNAALVNH  100 (382)
T ss_pred             EEEEecccccccCCCCHHHHHHHhh-------hcceEEecchhhcc
Confidence            888999988      3455666655       59999999998763

>KOG2733|consensus

Probab=98.24  E-value=6.2e-06  Score=60.55  Aligned_cols=85  Identities=20%  Similarity=0.260  Sum_probs=65.3

Q ss_pred             EEEEecCCcchHHHHHHHHHH----cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           4 IIVVTGASVGIGAAILRALAA----KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      -++|-||++.-|..+++++++    .+..+.+.+|++.++.                           +.++.+..+.+.
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~---------------------------~vL~~~~~k~~~   59 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQ---------------------------EVLEKVGEKTGT   59 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHH---------------------------HHHHHHhhccCC
Confidence            478999999999999999999    7889999999998773                           222333322211


Q ss_pred             --ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          80 --WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        80 --~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                        .+...+.+|.+|++++.++++       ...+|+||+|-..++
T Consensus        60 ~ls~~~i~i~D~~n~~Sl~emak-------~~~vivN~vGPyR~h   97 (423)
T KOG2733|consen   60 DLSSSVILIADSANEASLDEMAK-------QARVIVNCVGPYRFH   97 (423)
T ss_pred             CcccceEEEecCCCHHHHHHHHh-------hhEEEEeccccceec
Confidence              122378999999999999998       478999999977653

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.24  E-value=4.4e-06  Score=63.32  Aligned_cols=79  Identities=22%  Similarity=0.288  Sum_probs=55.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|+|+++ +|+++++.|+++|+.|++++++.....                          ++..+.+...    .
T Consensus         5 ~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~--------------------------~~~~~~l~~~----~   53 (450)
T PRK14106          5 GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQL--------------------------KEALEELGEL----G   53 (450)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHH--------------------------HHHHHHHHhc----C
Confidence            68999999877 999999999999999999998753110                          1111222211    2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++..|..+            +..+.+|++|+++|+....|
T Consensus        54 ~~~~~~~~~~------------~~~~~~d~vv~~~g~~~~~~   83 (450)
T PRK14106         54 IELVLGEYPE------------EFLEGVDLVVVSPGVPLDSP   83 (450)
T ss_pred             CEEEeCCcch------------hHhhcCCEEEECCCCCCCCH
Confidence            4466677765            12357999999999876554

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.18  E-value=1.3e-05  Score=51.52  Aligned_cols=37  Identities=35%  Similarity=0.399  Sum_probs=33.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      ++.++|.|+ ||.|++++..|+..|++ +.+++|+.++.
T Consensus        12 ~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra   49 (135)
T PF01488_consen   12 GKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERA   49 (135)
T ss_dssp             TSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHH
T ss_pred             CCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHH
Confidence            689999995 89999999999999986 99999997755

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.17  E-value=9.1e-06  Score=64.54  Aligned_cols=61  Identities=16%  Similarity=0.134  Sum_probs=48.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .+++||||++|.||+++++.|.++|++|..                                                  
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------------------------------  409 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------------------------------  409 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------------------------------
Confidence            457999999999999999999998877621                                                  


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                         ...|++|.+.+.+.++..     ++|.|||+|+...
T Consensus       410 ---~~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~  440 (668)
T PLN02260        410 ---GKGRLEDRSSLLADIRNV-----KPTHVFNAAGVTG  440 (668)
T ss_pred             ---eccccccHHHHHHHHHhh-----CCCEEEECCcccC
Confidence               113577788777777653     6899999999874

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.13  E-value=3.5e-06  Score=59.92  Aligned_cols=35  Identities=37%  Similarity=0.478  Sum_probs=32.3

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++|||++|.||++++.+|.+.|++|+++.|+.+..
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~   35 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKA   35 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcch
Confidence            48999999999999999999999999999997644

>KOG1221|consensus

Probab=98.07  E-value=2.2e-05  Score=59.79  Aligned_cols=104  Identities=19%  Similarity=0.246  Sum_probs=64.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC---CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG---HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      +|+++||||+|++|..+.++|++.-   -++++.-|........+.+.....+                ..++.+.+..+
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~----------------~lF~~l~~~~p   75 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKD----------------PLFEVLKEKKP   75 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhh----------------hHHHHHHhhCc
Confidence            7899999999999999999999864   2778888876544333333322211                22233332221


Q ss_pred             --CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          79 --DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        79 --~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                        -.++..+.+|+++++--..--+.. .-...+|++||+|+-..|.
T Consensus        76 ~~l~Kv~pi~GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrFd  120 (467)
T KOG1221|consen   76 EALEKVVPIAGDISEPDLGISESDLR-TLADEVNIVIHSAATVRFD  120 (467)
T ss_pred             cceecceeccccccCcccCCChHHHH-HHHhcCCEEEEeeeeeccc
Confidence              126778888888663211111111 1123799999999988764

>KOG1429|consensus

Probab=98.03  E-value=1.5e-05  Score=57.14  Aligned_cols=36  Identities=28%  Similarity=0.440  Sum_probs=32.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +++++||||+|+||.+++++|..+|+.|++++.-..
T Consensus        27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ft   62 (350)
T KOG1429|consen   27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFT   62 (350)
T ss_pred             CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccc
Confidence            468999999999999999999999999999998654

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.03  E-value=5.5e-05  Score=64.31  Aligned_cols=93  Identities=22%  Similarity=0.251  Sum_probs=58.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC----CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG----HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      ++++|||++|.+|..+++.|++++    ++|++..|+.........+.......    +              ...... 
T Consensus       972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~----~--------------~~~~~~- 1032 (1389)
T TIGR03443       972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTY----G--------------IWDEEW- 1032 (1389)
T ss_pred             ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHh----C--------------CCchhh-
Confidence            689999999999999999999887    79999999754332111111000000    0              000000 


Q ss_pred             CceeeEEEecCCCh------HHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          79 DWKVHSLKVDVTKD------AEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ..++.++.+|++++      +...++.       ..+|.+||||+...+
T Consensus      1033 ~~~i~~~~gDl~~~~lgl~~~~~~~l~-------~~~d~iiH~Aa~~~~ 1074 (1389)
T TIGR03443      1033 ASRIEVVLGDLSKEKFGLSDEKWSDLT-------NEVDVIIHNGALVHW 1074 (1389)
T ss_pred             hcceEEEeccCCCccCCcCHHHHHHHH-------hcCCEEEECCcEecC
Confidence            12578889999754      3322222       369999999998654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.90  E-value=6.6e-05  Score=50.84  Aligned_cols=79  Identities=27%  Similarity=0.417  Sum_probs=47.5

Q ss_pred             CcEEEEecC----------------CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccc
Q psy7029           2 SKIIVVTGA----------------SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR   65 (125)
Q Consensus         2 ~~~~lItG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (125)
                      ||.+|||+|                +|-.|.++|++++.+|++|+++..... .                          
T Consensus         3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~--------------------------   55 (185)
T PF04127_consen    3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-L--------------------------   55 (185)
T ss_dssp             T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------------------------
T ss_pred             CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-c--------------------------
Confidence            678888864                356999999999999999999987632 1                          


Q ss_pred             hHhHHHHHhhcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          66 RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                           .     .+. .+..+  ++..-+++.+.+.   +.+...|++|++|++..+.|
T Consensus        56 -----~-----~p~-~~~~i--~v~sa~em~~~~~---~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   56 -----P-----PPP-GVKVI--RVESAEEMLEAVK---ELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             -------------T-TEEEE--E-SSHHHHHHHHH---HHGGGGSEEEE-SB--SEEE
T ss_pred             -----c-----ccc-cceEE--Eecchhhhhhhhc---cccCcceeEEEecchhheee
Confidence                 0     011 23333  4555555444444   44555699999999988765

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.90  E-value=7.4e-05  Score=50.43  Aligned_cols=73  Identities=26%  Similarity=0.349  Sum_probs=57.0

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      ++-|.|++|-.|..++++..++|+.|.++.|+..+..                               ..      ..+.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~-------------------------------~~------~~~~   44 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA-------------------------------AR------QGVT   44 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcc-------------------------------cc------ccce
Confidence            3456899999999999999999999999999987551                               10      1455


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.|+.|++++.+.+.       ..|++|..-|...
T Consensus        45 i~q~Difd~~~~a~~l~-------g~DaVIsA~~~~~   74 (211)
T COG2910          45 ILQKDIFDLTSLASDLA-------GHDAVISAFGAGA   74 (211)
T ss_pred             eecccccChhhhHhhhc-------CCceEEEeccCCC
Confidence            67889999888766665       6888887766653

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.79  E-value=0.00011  Score=54.20  Aligned_cols=38  Identities=37%  Similarity=0.527  Sum_probs=32.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-C-CeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-G-HQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g-~~v~~~~r~~~~~   39 (125)
                      +|+++|||++|.||..+++.|+++ | .++++++|+....
T Consensus       155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl  194 (340)
T PRK14982        155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERL  194 (340)
T ss_pred             CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHH
Confidence            689999999999999999999864 5 4899999986544

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.75  E-value=6.4e-05  Score=56.97  Aligned_cols=35  Identities=23%  Similarity=0.190  Sum_probs=31.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +|+++|||+++ +|++.++.|++.|++|++.+++..
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~   39 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPF   39 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCc
Confidence            68999999876 999999999999999999987653

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.63  E-value=0.00045  Score=49.28  Aligned_cols=37  Identities=22%  Similarity=0.232  Sum_probs=32.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +|+++|+|+ +|+|++++..|++.|++|.+++|+.++.
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~  153 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKA  153 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            578999998 6999999999999999999999987644

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.54  E-value=0.00032  Score=54.59  Aligned_cols=37  Identities=35%  Similarity=0.413  Sum_probs=32.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +|+++|+|+ +|+|++++..|++.|++|++++|+.+..
T Consensus       379 ~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a  415 (529)
T PLN02520        379 GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERA  415 (529)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            578999998 5999999999999999999999986544

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.53  E-value=0.00028  Score=51.77  Aligned_cols=33  Identities=21%  Similarity=0.170  Sum_probs=28.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHcC-------CeEEEeecCc
Q psy7029           4 IIVVTGASVGIGAAILRALAAKG-------HQVIGFARRA   36 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g-------~~v~~~~r~~   36 (125)
                      +++|||++|.+|..++..|+..+       .+++++++++
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            57999999999999999999854       4899999865

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.50  E-value=0.0014  Score=47.15  Aligned_cols=38  Identities=26%  Similarity=0.445  Sum_probs=33.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+++++|.++++.+...|++++++.++....
T Consensus       167 ~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~  204 (342)
T cd08266         167 GETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKL  204 (342)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            56899999999999999999999999999998876543

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.48  E-value=0.0015  Score=51.53  Aligned_cols=77  Identities=25%  Similarity=0.364  Sum_probs=57.0

Q ss_pred             CcEEEEecCCc-chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcC--C
Q psy7029           2 SKIIVVTGASV-GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKEN--P   78 (125)
Q Consensus         2 ~~~~lItG~~~-giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   78 (125)
                      ++++||||++. .||.+++.+|+..|+.|+++..+.+..     ...+|                     +.+-..+  .
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~-----r~efy---------------------r~LYa~~a~~  449 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEE-----RTEFY---------------------RSLYARHARY  449 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHH-----HHHHH---------------------HHHHHhhCCC
Confidence            68999999985 599999999999999999987665422     22222                     2222221  2


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHh
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINN  104 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~  104 (125)
                      +..+..++.+..+..+|..+++.+..
T Consensus       450 ga~LwvVpaN~~SysDVdAlIewIg~  475 (866)
T COG4982         450 GAALWVVPANMGSYSDVDALIEWIGD  475 (866)
T ss_pred             CceEEEEeccccchhhHHHHHHHhcc
Confidence            33567778999999999999999965

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.47  E-value=0.00068  Score=43.98  Aligned_cols=37  Identities=30%  Similarity=0.382  Sum_probs=31.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ +++|.++++.|.+.| ..|.+++|+.+..
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~   56 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKA   56 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH
Confidence            477899997 799999999999986 7899999987644

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.44  E-value=0.00069  Score=48.58  Aligned_cols=37  Identities=27%  Similarity=0.344  Sum_probs=32.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ ||+|+++++.|+..| .+|++++|+.+..
T Consensus       123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a  160 (278)
T PRK00258        123 GKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA  160 (278)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            578999996 899999999999999 6999999987654

>PRK06849 hypothetical protein; Provisional

Probab=97.44  E-value=0.0019  Score=48.32  Aligned_cols=36  Identities=25%  Similarity=0.299  Sum_probs=33.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      .+++||||++..+|..+++.|.+.|++|++++....
T Consensus         4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            589999999999999999999999999999988754

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.40  E-value=0.0012  Score=47.49  Aligned_cols=38  Identities=32%  Similarity=0.515  Sum_probs=33.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|+|+++++|+++++.+...|++++++.++.+..
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~  200 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL  200 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence            56899999999999999999999999999998876533

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.39  E-value=0.0014  Score=46.55  Aligned_cols=34  Identities=24%  Similarity=0.396  Sum_probs=30.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      .++|+|||+- |+.+++.|.++|+.|++..++...
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~   35 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG   35 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc
Confidence            5899999987 999999999999999999988753

This enzyme was found to be a monomer by gel filtration.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.37  E-value=0.0017  Score=46.15  Aligned_cols=38  Identities=29%  Similarity=0.344  Sum_probs=33.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+++++|..+++.+...|++|++++++.+..
T Consensus       145 g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  182 (325)
T cd08253         145 GETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGA  182 (325)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            67899999999999999999999999999998876543

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.35  E-value=0.0019  Score=47.11  Aligned_cols=38  Identities=26%  Similarity=0.345  Sum_probs=33.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+++++|..+++.+...|++|+++.++.++.
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~  189 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKV  189 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            67999999999999999887778899999988876644

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.33  E-value=0.00077  Score=49.39  Aligned_cols=77  Identities=18%  Similarity=0.173  Sum_probs=57.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ...+|-|+++..|.-++++|+++|.+..+.+|+..++                               ..+...... ..
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl-------------------------------~~l~~~LG~-~~   54 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKL-------------------------------DALRASLGP-EA   54 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHH-------------------------------HHHHHhcCc-cc
Confidence            4678999999999999999999999999999998766                               333322221 23


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      -.+++  -++..+.++++       +.++|+||+|-..
T Consensus        55 ~~~p~--~~p~~~~~~~~-------~~~VVlncvGPyt   83 (382)
T COG3268          55 AVFPL--GVPAALEAMAS-------RTQVVLNCVGPYT   83 (382)
T ss_pred             cccCC--CCHHHHHHHHh-------cceEEEecccccc
Confidence            33333  33777777776       6899999999654

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.32  E-value=0.0021  Score=46.52  Aligned_cols=38  Identities=24%  Similarity=0.399  Sum_probs=32.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+++++|..+++.....|++|+++.++.++.
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~  176 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV  176 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            67899999999999998887777899999988876544

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.31  E-value=0.0034  Score=44.53  Aligned_cols=38  Identities=26%  Similarity=0.487  Sum_probs=33.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+++++|..+++.+...|+.++++.++.+..
T Consensus       140 ~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~  177 (323)
T cd05276         140 GETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKL  177 (323)
T ss_pred             CCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence            57899999999999999999999999999998876543

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.28  E-value=0.0032  Score=46.23  Aligned_cols=37  Identities=27%  Similarity=0.474  Sum_probs=29.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |.++||+||+||+|....+.....|+.++++..+.++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k  179 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEK  179 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHH
Confidence            6899999999999999887777778766666655543

>KOG1202|consensus

Probab=97.24  E-value=0.0011  Score=55.82  Aligned_cols=96  Identities=16%  Similarity=0.204  Sum_probs=68.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      .|.++|+||-+|.|..++.+|.++|+ .+++..|+.-+.-+-.-..                        +.-..  .+.
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~v------------------------rrWr~--~GV 1821 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMV------------------------RRWRR--RGV 1821 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHH------------------------HHHHh--cCe
Confidence            57899999999999999999999998 6777888754332111111                        11111  234


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++..-..|++..+.-.++++.. .+.+.+-+++|.|.+..+..+
T Consensus      1822 qV~vsT~nitt~~ga~~Li~~s-~kl~~vGGiFnLA~VLRD~Li 1864 (2376)
T KOG1202|consen 1822 QVQVSTSNITTAEGARGLIEES-NKLGPVGGIFNLAAVLRDGLI 1864 (2376)
T ss_pred             EEEEecccchhhhhHHHHHHHh-hhcccccchhhHHHHHHhhhh
Confidence            5666677888888888888764 456889999999988776543

>KOG1198|consensus

Probab=97.20  E-value=0.0041  Score=46.11  Aligned_cols=80  Identities=21%  Similarity=0.201  Sum_probs=49.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |+.+||.||++|+|...++-....++..+++.++.+..                                ++.+..... 
T Consensus       158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~--------------------------------~l~k~lGAd-  204 (347)
T KOG1198|consen  158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL--------------------------------ELVKKLGAD-  204 (347)
T ss_pred             CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH--------------------------------HHHHHcCCc-
Confidence            67999999999999998877667784444444444332                                222222221 


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                         ...|..+++-+++ +++..  .+++|+++-|+|-..
T Consensus       205 ---~vvdy~~~~~~e~-~kk~~--~~~~DvVlD~vg~~~  237 (347)
T KOG1198|consen  205 ---EVVDYKDENVVEL-IKKYT--GKGVDVVLDCVGGST  237 (347)
T ss_pred             ---EeecCCCHHHHHH-HHhhc--CCCccEEEECCCCCc
Confidence               2347776443333 33222  568999999998743

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.19  E-value=0.0035  Score=46.14  Aligned_cols=38  Identities=21%  Similarity=0.302  Sum_probs=32.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+++++|...++.....|++|++++++.++.
T Consensus       159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~  196 (348)
T PLN03154        159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV  196 (348)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence            67899999999999998887777899999888876544

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.16  E-value=0.0038  Score=45.42  Aligned_cols=37  Identities=24%  Similarity=0.295  Sum_probs=31.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      .+++|+|+++++|...++.....|+ +|+++.+++++.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~  193 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKC  193 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence            7999999999999998887777898 799998876543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.14  E-value=0.0056  Score=45.73  Aligned_cols=36  Identities=11%  Similarity=0.139  Sum_probs=30.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.++|.|+ |.+|+..++.+...|++|++++|+.+..
T Consensus       168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~  203 (370)
T TIGR00518       168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL  203 (370)
T ss_pred             ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            45788876 7899999999999999999999986543

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>KOG1372|consensus

Probab=97.10  E-value=0.0021  Score=45.68  Aligned_cols=90  Identities=18%  Similarity=0.204  Sum_probs=61.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|++||||-++-=|..+++-|+..|+.|..+-|..+.... ....+.|                     ..-... ++..
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT-~RIeHlY---------------------~nP~~h-~~~~   84 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT-ARIEHLY---------------------SNPHTH-NGAS   84 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch-hhhhhhh---------------------cCchhc-ccce
Confidence            3699999999999999999999999999998887654321 0000111                     000011 2335


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ..+--.|++|..++.+++..+     +++-++|.|+-+
T Consensus        85 mkLHYgDmTDss~L~k~I~~i-----kPtEiYnLaAQS  117 (376)
T KOG1372|consen   85 MKLHYGDMTDSSCLIKLISTI-----KPTEVYNLAAQS  117 (376)
T ss_pred             eEEeeccccchHHHHHHHhcc-----Cchhhhhhhhhc
Confidence            566678999999999999876     455555555544

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.06  E-value=0.002  Score=46.40  Aligned_cols=37  Identities=27%  Similarity=0.351  Sum_probs=32.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++.++|.| +||.+++++..|++.|+ ++.++.|+.++.
T Consensus       126 ~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra  163 (283)
T COG0169         126 GKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERA  163 (283)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            57889998 67889999999999995 899999998765

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.04  E-value=0.0038  Score=47.33  Aligned_cols=37  Identities=27%  Similarity=0.332  Sum_probs=31.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +++++|.|+ ||.|+.+++.|+..|+ +++++.|+....
T Consensus       181 ~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra  218 (414)
T PRK13940        181 SKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKA  218 (414)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            678999995 9999999999999996 799999986544

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.04  E-value=0.0071  Score=44.64  Aligned_cols=37  Identities=32%  Similarity=0.528  Sum_probs=32.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|.+ |+|...++.....|++|++++|++++.
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~  203 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKL  203 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHH
Confidence            7899999988 999887776666899999999998866

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.03  E-value=0.0078  Score=41.76  Aligned_cols=37  Identities=27%  Similarity=0.339  Sum_probs=31.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+++ +|..+++.+...|.+|+++.++++..
T Consensus       135 ~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~  171 (271)
T cd05188         135 GDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKL  171 (271)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            56899999988 99999998888899999998876543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.02  E-value=0.0065  Score=46.79  Aligned_cols=33  Identities=30%  Similarity=0.301  Sum_probs=27.8

Q ss_pred             CcEEEEecC----------------CcchHHHHHHHHHHcCCeEEEeec
Q psy7029           2 SKIIVVTGA----------------SVGIGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         2 ~~~~lItG~----------------~~giG~~~a~~l~~~g~~v~~~~r   34 (125)
                      ||.+|||+|                ||-.|+++|+.+..+|++|+++.-
T Consensus       256 gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~G  304 (475)
T PRK13982        256 GRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISG  304 (475)
T ss_pred             CCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeC
Confidence            678888875                345999999999999999999864

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.98  E-value=0.0048  Score=44.49  Aligned_cols=37  Identities=24%  Similarity=0.267  Sum_probs=31.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +|.++|.|+ ||-+++++..|++.|+ ++.+++|+.++.
T Consensus       127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka  164 (283)
T PRK14027        127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA  164 (283)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH
Confidence            578899995 8899999999999997 788999987654

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.97  E-value=0.0011  Score=45.35  Aligned_cols=37  Identities=22%  Similarity=0.341  Sum_probs=32.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ||++.|+|.+ .+|+.+++.|.+.|++|++.+++.+..
T Consensus        28 gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~   64 (200)
T cd01075          28 GKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAV   64 (200)
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            6899999975 899999999999999999999886543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.96  E-value=0.0083  Score=43.25  Aligned_cols=37  Identities=27%  Similarity=0.301  Sum_probs=31.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++.++|.| +||.|++++..|+..|+ +|++++|+.++.
T Consensus       127 ~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka  164 (284)
T PRK12549        127 LERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARA  164 (284)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            46789998 57899999999999998 799999987654

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.96  E-value=0.006  Score=42.51  Aligned_cols=35  Identities=29%  Similarity=0.567  Sum_probs=29.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .++|.| .|-+|+.+|+.|.++|++|++++++++..
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~   36 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERV   36 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHH
Confidence            456666 56789999999999999999999998754

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.95  E-value=0.015  Score=42.98  Aligned_cols=34  Identities=29%  Similarity=0.332  Sum_probs=29.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      .++++|.|+ ||+|..+++.|++.|. ++.+++++.
T Consensus        24 ~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            467888985 7899999999999997 888898874

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.94  E-value=0.0056  Score=46.44  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=30.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .++|.|+ |.+|+.+++.|.++|+.+++++++++..
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~   36 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERL   36 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence            5777886 8999999999999999999999987654

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.92  E-value=0.0096  Score=42.89  Aligned_cols=38  Identities=29%  Similarity=0.473  Sum_probs=32.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+++++|..+++.....|++|+++.++.+..
T Consensus       144 g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~  181 (329)
T cd08294         144 GETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV  181 (329)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            67899999999999998887778899999988876644

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.87  E-value=0.011  Score=43.28  Aligned_cols=37  Identities=22%  Similarity=0.339  Sum_probs=30.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...+..+...|+ +|++++++++..
T Consensus       170 g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~  207 (343)
T PRK09880        170 GKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL  207 (343)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH
Confidence            578999986 8999998887777898 688888887654

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.86  E-value=0.005  Score=44.29  Aligned_cols=37  Identities=24%  Similarity=0.265  Sum_probs=31.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++.++|.| +||.+++++..|++.|+ +|.+++|+.++.
T Consensus       125 ~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka  162 (282)
T TIGR01809       125 GFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKL  162 (282)
T ss_pred             CceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            57888898 58999999999999997 799999987655

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.86  E-value=0.0057  Score=47.17  Aligned_cols=37  Identities=27%  Similarity=0.410  Sum_probs=32.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ ||+|++++..|++.|+++++++|+.+..
T Consensus       332 ~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~  368 (477)
T PRK09310        332 NQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHA  368 (477)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            578999995 7999999999999999999999876544

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.77  E-value=0.0037  Score=45.16  Aligned_cols=36  Identities=28%  Similarity=0.280  Sum_probs=32.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |++++|.|. |++|+.+++.|...|++|++++|+.+.
T Consensus       151 gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~  186 (287)
T TIGR02853       151 GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSAD  186 (287)
T ss_pred             CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            688999996 669999999999999999999998754

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.71  E-value=0.052  Score=34.52  Aligned_cols=97  Identities=18%  Similarity=0.335  Sum_probs=55.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|.| .+|+|..+++.|++.|. ++.+++.+.=...   .+.+...  .   ........+.....+.+...++..+
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~---nl~r~~~--~---~~~~vG~~Ka~~~~~~l~~~np~~~   73 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPS---NLNRQFL--Y---TEEDVGKNKAEAAKERLQEINPDVE   73 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GG---GCCTCTT--S----GGGTTSBHHHHHHHHHHHHSTTSE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeec---ccccccc--c---ccccchhHHHHHHHHHHHHhcCcee
Confidence            5677777 77999999999999998 7888887632110   0000000  0   0001122333344455555566667


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA  116 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~na  116 (125)
                      +..+..++ +.+...++++       ..|++|.+.
T Consensus        74 v~~~~~~~-~~~~~~~~~~-------~~d~vi~~~  100 (135)
T PF00899_consen   74 VEAIPEKI-DEENIEELLK-------DYDIVIDCV  100 (135)
T ss_dssp             EEEEESHC-SHHHHHHHHH-------TSSEEEEES
T ss_pred             eeeeeccc-cccccccccc-------CCCEEEEec
Confidence            77877777 3444555553       567777654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.70  E-value=0.023  Score=40.43  Aligned_cols=38  Identities=24%  Similarity=0.392  Sum_probs=33.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+++++|..+++.+...|++++++.++.+..
T Consensus       140 ~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  177 (325)
T TIGR02824       140 GETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC  177 (325)
T ss_pred             CCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            67899999999999999998889999999998876543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.70  E-value=0.039  Score=38.97  Aligned_cols=33  Identities=27%  Similarity=0.306  Sum_probs=28.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      .++++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        32 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         32 AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            457888886 8999999999999997 78888775

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.69  E-value=0.013  Score=36.13  Aligned_cols=34  Identities=29%  Similarity=0.428  Sum_probs=27.8

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~   34 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERV   34 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHH
Confidence            467775 5799999999999777999999997654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.68  E-value=0.029  Score=35.99  Aligned_cols=30  Identities=23%  Similarity=0.373  Sum_probs=26.3

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      ++|.|+ +|+|..+++.|++.|. ++.+++.+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            677885 8999999999999998 78888876

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>KOG1203|consensus

Probab=96.68  E-value=0.0092  Score=45.09  Aligned_cols=38  Identities=24%  Similarity=0.438  Sum_probs=34.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ..+++|+|++|++|+-+++.|.++|+.|.+..|+.+..
T Consensus        79 ~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a  116 (411)
T KOG1203|consen   79 PTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKA  116 (411)
T ss_pred             CCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhh
Confidence            35899999999999999999999999999999997754

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.67  E-value=0.021  Score=39.77  Aligned_cols=34  Identities=24%  Similarity=0.306  Sum_probs=28.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ..+++|.| .+|+|..+++.|++.|. ++.+++.+.
T Consensus        21 ~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~   55 (228)
T cd00757          21 NARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDV   55 (228)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            45778887 77999999999999997 788887753

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.67  E-value=0.028  Score=43.80  Aligned_cols=37  Identities=27%  Similarity=0.332  Sum_probs=31.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|+| .|.+|...+..+...|+.|++++++++..
T Consensus       165 g~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rl  201 (509)
T PRK09424        165 PAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVA  201 (509)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            56889998 67899998888888899999999987655

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.67  E-value=0.023  Score=40.88  Aligned_cols=38  Identities=24%  Similarity=0.373  Sum_probs=33.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|.|+++++|..+++.+.+.|++++++.++.+..
T Consensus       146 ~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~  183 (329)
T cd05288         146 GETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKC  183 (329)
T ss_pred             CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            57899999999999999998888999999998876543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.63  E-value=0.013  Score=49.15  Aligned_cols=76  Identities=16%  Similarity=0.173  Sum_probs=54.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-Ce-------------EEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchH
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQ-------------VIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRA   67 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (125)
                      +|.++|.|+ |.+|...++.|++.. +.             |.+.+++.+..                            
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a----------------------------  619 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDA----------------------------  619 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHH----------------------------
Confidence            467889995 899999999998763 33             77777765433                            


Q ss_pred             hHHHHHhhcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCccc
Q psy7029          68 EMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV  118 (125)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~  118 (125)
                         +.+.....  .+..++.|++|.+++.++++       .+|++|++...
T Consensus       620 ---~~la~~~~--~~~~v~lDv~D~e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        620 ---KETVEGIE--NAEAVQLDVSDSESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             ---HHHHHhcC--CCceEEeecCCHHHHHHhhc-------CCCEEEECCCc
Confidence               33332222  35678899999998877766       59999988765

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.62  E-value=0.038  Score=40.87  Aligned_cols=34  Identities=26%  Similarity=0.319  Sum_probs=29.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ..+++|.|+ ||+|..+++.|++.|. ++.+++.+.
T Consensus        24 ~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         24 EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            457888885 8999999999999998 899998863

>cd00704 MDH Malate dehydrogenase

Probab=96.61  E-value=0.0079  Score=44.18  Aligned_cols=33  Identities=21%  Similarity=0.195  Sum_probs=28.0

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC-------eEEEeecCc
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH-------QVIGFARRA   36 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~-------~v~~~~r~~   36 (125)
                      ++.|+|++|.+|..++..|+.++.       .++++++++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            478999999999999999998663       488998875

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.59  E-value=0.025  Score=40.23  Aligned_cols=38  Identities=29%  Similarity=0.402  Sum_probs=33.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+++++|..+++.+...|++++++.++.+..
T Consensus       145 ~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~  182 (328)
T cd08268         145 GDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKR  182 (328)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence            56899999999999999999999999999998876543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.59  E-value=0.039  Score=37.75  Aligned_cols=34  Identities=18%  Similarity=0.323  Sum_probs=29.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ..+++|.| .||+|..+++.|++.|. ++.+++++.
T Consensus        21 ~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~   55 (202)
T TIGR02356        21 NSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDH   55 (202)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence            45678888 77999999999999997 899998873

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PTZ00325 malate dehydrogenase; Provisional

Probab=96.59  E-value=0.0066  Score=44.57  Aligned_cols=34  Identities=21%  Similarity=0.198  Sum_probs=29.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC--CeEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG--HQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~   35 (125)
                      ++++.|+|++|.+|..++..|+.++  .+++++++.
T Consensus         8 ~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~   43 (321)
T PTZ00325          8 MFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV   43 (321)
T ss_pred             CCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC
Confidence            4788999999999999999998665  589999983

>PLN00106 malate dehydrogenase

Probab=96.56  E-value=0.0052  Score=45.14  Aligned_cols=34  Identities=18%  Similarity=0.185  Sum_probs=29.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH--QVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~   36 (125)
                      +++.|+|++|.+|..++..|+.++.  +++++++++
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~   54 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN   54 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence            5789999999999999999997764  799999876

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.56  E-value=0.04  Score=41.26  Aligned_cols=33  Identities=21%  Similarity=0.252  Sum_probs=28.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      .++++|.| .||+|..+++.|++.|. ++.+++++
T Consensus       135 ~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        135 EARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             cCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45677776 57999999999999998 78888886

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.54  E-value=0.018  Score=43.79  Aligned_cols=37  Identities=30%  Similarity=0.384  Sum_probs=31.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +++++|.|+ |.+|..+++.|...|+ +|++++|+.+..
T Consensus       182 ~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra  219 (423)
T PRK00045        182 GKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERA  219 (423)
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHH
Confidence            578899985 9999999999999997 799999987644

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.53  E-value=0.007  Score=43.89  Aligned_cols=36  Identities=28%  Similarity=0.296  Sum_probs=32.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +++++|.|. |++|+.++..|.+.|++|.+++|+.+.
T Consensus       152 g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        152 GSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            688999996 679999999999999999999998653

>PRK04148 hypothetical protein; Provisional

Probab=96.50  E-value=0.0093  Score=38.35  Aligned_cols=36  Identities=22%  Similarity=0.264  Sum_probs=30.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.+++.|.+  .|.+++..|.+.|++|++++.++...
T Consensus        17 ~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV   52 (134)
T PRK04148         17 NKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAV   52 (134)
T ss_pred             CCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHH
Confidence            3568889977  67788999999999999999998744

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=96.48  E-value=0.024  Score=41.25  Aligned_cols=72  Identities=14%  Similarity=0.201  Sum_probs=53.4

Q ss_pred             cEEEEecC-CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGA-SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~-~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .++||.|. ..-+++.++..|-++|+-|+++..+.+..                               +..+.+. ...
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~-------------------------------~~ve~e~-~~d   51 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDE-------------------------------KYVESED-RPD   51 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHH-------------------------------HHHHhcc-CCC
Confidence            57888886 68999999999999999999999887644                               3333333 224


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKF  106 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~  106 (125)
                      +..+..|..++..+...+.++....
T Consensus        52 I~~L~ld~~~~~~~~~~l~~f~~~L   76 (299)
T PF08643_consen   52 IRPLWLDDSDPSSIHASLSRFASLL   76 (299)
T ss_pred             CCCcccCCCCCcchHHHHHHHHHHh
Confidence            7777888877777777766665543

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.44  E-value=0.0065  Score=35.12  Aligned_cols=33  Identities=39%  Similarity=0.473  Sum_probs=21.4

Q ss_pred             cEEEEecCCcchHHHHHHHHH-HcCCeEEEeecC
Q psy7029           3 KIIVVTGASVGIGAAILRALA-AKGHQVIGFARR   35 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~-~~g~~v~~~~r~   35 (125)
                      |++||+|+++|.|++..-.++ ..|++.+.+...
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            789999999999999444444 557777776553

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.43  E-value=0.048  Score=37.34  Aligned_cols=33  Identities=21%  Similarity=0.326  Sum_probs=28.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      .++++|.|+ ||+|..++..|++.|. ++++++++
T Consensus        21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            457888885 7899999999999998 79999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.37  E-value=0.047  Score=40.43  Aligned_cols=37  Identities=16%  Similarity=0.313  Sum_probs=30.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...+..+...|+ +|++++++.++.
T Consensus       186 g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~  223 (368)
T TIGR02818       186 GDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKF  223 (368)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            678999985 8999998887777898 799998877654

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PLN00203 glutamyl-tRNA reductase

Probab=96.36  E-value=0.027  Score=43.98  Aligned_cols=37  Identities=27%  Similarity=0.466  Sum_probs=32.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++.++|.|+ |.+|..+++.|...|+ +|++++|+.+..
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era  303 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERV  303 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHH
Confidence            478999997 9999999999999997 799999987654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.35  E-value=0.021  Score=43.38  Aligned_cols=37  Identities=24%  Similarity=0.310  Sum_probs=32.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .+.++|.|+ |.+|+.+++.|.+.|+.|++++++++..
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~  267 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERA  267 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            367899996 8899999999999999999999987644

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.35  E-value=0.041  Score=40.00  Aligned_cols=37  Identities=30%  Similarity=0.408  Sum_probs=30.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...+..+...|++ |+++++++++.
T Consensus       164 g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~  201 (339)
T cd08239         164 RDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERL  201 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            578899985 89999998888888998 99888876644

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.32  E-value=0.03  Score=40.71  Aligned_cols=97  Identities=24%  Similarity=0.330  Sum_probs=56.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHH--cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAA--KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~--~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |.+||.|+++|.|++. |--+.  .|++.+.+.--....+...-....|.+                ..++...+. .+.
T Consensus        42 KkVLviGaSsGyGLa~-RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~----------------~~f~~~A~~-kGl  103 (398)
T COG3007          42 KKVLVIGASSGYGLAA-RISAAFGPGADTIGVFFERPGTERKPGTAGWYNN----------------AAFKKFAKQ-KGL  103 (398)
T ss_pred             ceEEEEecCCcccHHH-HHHHHhCCCCceeeEEeecCCccCCCcchhhhHH----------------HHHHHHHHh-cCc
Confidence            7899999999988873 22233  345655543322211111111111111                112222221 222


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG  117 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag  117 (125)
                      -...+..|.-+.+--..+++.++..+|++|.+|+.-+
T Consensus       104 yAksingDaFS~e~k~kvIe~Ik~~~g~vDlvvYSlA  140 (398)
T COG3007         104 YAKSINGDAFSDEMKQKVIEAIKQDFGKVDLVVYSLA  140 (398)
T ss_pred             eeeecccchhhHHHHHHHHHHHHHhhccccEEEEecc
Confidence            3556788998888889999999999999998876543

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.31  E-value=0.034  Score=42.21  Aligned_cols=37  Identities=24%  Similarity=0.313  Sum_probs=32.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~   39 (125)
                      +++++|.|+ |.+|..+++.|...| .+|++++|+.+..
T Consensus       180 ~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra  217 (417)
T TIGR01035       180 GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERA  217 (417)
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHH
Confidence            578999996 999999999999999 6899999987643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.31  E-value=0.052  Score=40.16  Aligned_cols=37  Identities=22%  Similarity=0.436  Sum_probs=31.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...+..+...|+ .|++++++.++.
T Consensus       187 g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~  224 (368)
T cd08300         187 GSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKF  224 (368)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            678999985 8999998888888899 699998887654

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.31  E-value=0.065  Score=39.88  Aligned_cols=34  Identities=26%  Similarity=0.363  Sum_probs=28.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ..+++|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus        28 ~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            457888885 8999999999999997 788888764

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=96.30  E-value=0.011  Score=43.36  Aligned_cols=33  Identities=30%  Similarity=0.278  Sum_probs=27.5

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-------eEEEeecCch
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-------QVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-------~v~~~~r~~~   37 (125)
                      +.|+|++|.+|..++..|+.++.       .++++++.+.
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~   41 (324)
T TIGR01758         2 VVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPA   41 (324)
T ss_pred             EEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCc
Confidence            67999999999999999998653       4889988644

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.30  E-value=0.041  Score=40.32  Aligned_cols=31  Identities=26%  Similarity=0.495  Sum_probs=26.1

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ++|.| .||+|-.+++.|+..|. ++.+++.+.
T Consensus         2 VlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~   33 (312)
T cd01489           2 VLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDT   33 (312)
T ss_pred             EEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCC
Confidence            67788 58999999999999997 788877753

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.27  E-value=0.047  Score=37.27  Aligned_cols=32  Identities=25%  Similarity=0.400  Sum_probs=26.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      .+++|.|+ +|+|..+++.|+..|. ++.+++.+
T Consensus        20 s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          20 AKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            46777775 4599999999999997 68888776

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PLN02740 Alcohol dehydrogenase-like

Probab=96.22  E-value=0.057  Score=40.20  Aligned_cols=37  Identities=22%  Similarity=0.403  Sum_probs=30.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...+..+...|+ +|++++++++..
T Consensus       199 g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~  236 (381)
T PLN02740        199 GSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKF  236 (381)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHH
Confidence            678999985 8999998888778898 699998876654

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.16  E-value=0.066  Score=37.63  Aligned_cols=31  Identities=29%  Similarity=0.516  Sum_probs=26.0

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ++|.| .||+|..+++.|+..|. ++.+++.+.
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~   33 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDT   33 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            56677 78999999999999997 788887763

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>KOG4039|consensus

Probab=96.15  E-value=0.033  Score=37.78  Aligned_cols=36  Identities=22%  Similarity=0.208  Sum_probs=31.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~   37 (125)
                      ++.++|.|+++-.|..+.+.+++.+-  +|+++.|...
T Consensus        18 ~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~   55 (238)
T KOG4039|consen   18 NMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL   55 (238)
T ss_pred             ccceEEEeccccccHHHHHHHHhcccceeEEEEEeccC
Confidence            46789999999999999999999874  8999999753

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.13  E-value=0.036  Score=40.03  Aligned_cols=35  Identities=26%  Similarity=0.220  Sum_probs=31.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ||.++|.|+++-.|+.++..|.++|+.|.++.|..
T Consensus       159 Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t  193 (283)
T PRK14192        159 GKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT  193 (283)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            78999999887799999999999999888887743

>KOG0747|consensus

Probab=96.12  E-value=0.0079  Score=43.42  Aligned_cols=84  Identities=17%  Similarity=0.226  Sum_probs=59.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc--CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK--GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.++|||+.+.||...+..++..  .++.+.++.-.=                          -+.   .+.+.......
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~--------------------------~s~---~~~l~~~~n~p   57 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDY--------------------------CSN---LKNLEPVRNSP   57 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccc--------------------------ccc---cchhhhhccCC
Confidence            67899999999999999999876  456555543210                          000   13333333445


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +..++..|+.+...+..++..     .++|.|+|-|+...
T Consensus        58 ~ykfv~~di~~~~~~~~~~~~-----~~id~vihfaa~t~   92 (331)
T KOG0747|consen   58 NYKFVEGDIADADLVLYLFET-----EEIDTVIHFAAQTH   92 (331)
T ss_pred             CceEeeccccchHHHHhhhcc-----CchhhhhhhHhhhh
Confidence            788999999999988888775     58999999887654

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.10  E-value=0.068  Score=38.28  Aligned_cols=38  Identities=26%  Similarity=0.457  Sum_probs=32.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|+|+++++|..+++.+...|++++++.++.+..
T Consensus       143 ~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~  180 (324)
T cd08244         143 GDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKT  180 (324)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            56899999999999999888888899999998876543

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.10  E-value=0.11  Score=34.77  Aligned_cols=31  Identities=23%  Similarity=0.294  Sum_probs=26.9

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ++|.| .+|+|..+++.|++.|. ++.+++.+.
T Consensus         2 VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            56777 58999999999999998 699998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.09  E-value=0.046  Score=39.85  Aligned_cols=37  Identities=32%  Similarity=0.364  Sum_probs=30.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~   39 (125)
                      +++++|.|+ |.+|..+++.|...| .+|++++|+.+..
T Consensus       178 ~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra  215 (311)
T cd05213         178 GKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA  215 (311)
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            578888986 899999999999866 5788999987644

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.08  E-value=0.084  Score=38.99  Aligned_cols=37  Identities=16%  Similarity=0.356  Sum_probs=30.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...++.+...|+ +|++++++.+..
T Consensus       188 g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~  225 (369)
T cd08301         188 GSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKF  225 (369)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            678999985 8999998887777898 799998887654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK13886 conjugal transfer protein TraL; Provisional

Probab=96.07  E-value=0.063  Score=37.92  Aligned_cols=38  Identities=24%  Similarity=0.316  Sum_probs=31.9

Q ss_pred             CCcEEEEecCCcchHHHH-----HHHHHHcCCeEEEeecCchh
Q psy7029           1 MSKIIVVTGASVGIGAAI-----LRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~-----a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |.++.+|.++-+|.|+..     +..|+++|.+|.+++-++..
T Consensus         1 m~~i~~i~~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D~~n   43 (241)
T PRK13886          1 MAKIHMVLQGKGGVGKSFIAATIAQYKASKGQKPLCIDTDPVN   43 (241)
T ss_pred             CCeEEEEecCCCCCcHHHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence            778999999999999885     67778889999999887654

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.05  E-value=0.027  Score=44.19  Aligned_cols=36  Identities=14%  Similarity=0.203  Sum_probs=30.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ..++|.| .+.+|+.+++.|.++|.++++++++++..
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~  453 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRV  453 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence            4567777 67889999999999999999999987654

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.00  E-value=0.077  Score=38.22  Aligned_cols=38  Identities=26%  Similarity=0.354  Sum_probs=32.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|.|+++++|..+++.....|++++++.++.+..
T Consensus       140 ~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~  177 (329)
T cd08250         140 GETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKA  177 (329)
T ss_pred             CCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHH
Confidence            56899999999999998888888899999988876543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK08223 hypothetical protein; Validated

Probab=95.99  E-value=0.073  Score=38.55  Aligned_cols=32  Identities=22%  Similarity=0.215  Sum_probs=26.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      .+++|.| .+|+|..+++.|++.|. ++.+++.+
T Consensus        28 s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         28 SRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            4677777 67999999999999997 78887776

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.96  E-value=0.05  Score=39.01  Aligned_cols=38  Identities=24%  Similarity=0.375  Sum_probs=32.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.|+++++|..+++.....|+.++++.++.+..
T Consensus       140 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~  177 (324)
T cd08292         140 GQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGV  177 (324)
T ss_pred             CCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHH
Confidence            57899999999999999998888899999998876543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.94  E-value=0.072  Score=35.05  Aligned_cols=36  Identities=31%  Similarity=0.361  Sum_probs=28.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++-+.| .+-+|..+++.|++.|++|.+.+|+++..
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~   37 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKA   37 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHH
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhh
Confidence            4455566 47899999999999999999999997654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=95.92  E-value=0.12  Score=40.37  Aligned_cols=37  Identities=27%  Similarity=0.313  Sum_probs=31.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|.| .|.+|...+..+...|+.|++++++....
T Consensus       164 ~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rl  200 (511)
T TIGR00561       164 PAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVK  200 (511)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            35788898 58899999999999999999999987644

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.91  E-value=0.11  Score=38.95  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=28.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      ..+++|.| .||+|..+++.|++.|. ++.+++.+
T Consensus        41 ~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         41 NARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45678887 67999999999999997 88888876

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.90  E-value=0.09  Score=37.04  Aligned_cols=33  Identities=24%  Similarity=0.320  Sum_probs=27.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      .+++|.| .||+|..+++.|++.|. ++.+++.+.
T Consensus        25 ~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        25 SRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            4677777 67999999999999997 788887763

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.88  E-value=0.09  Score=38.05  Aligned_cols=35  Identities=37%  Similarity=0.419  Sum_probs=29.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~   37 (125)
                      +|+++|.|+ ||-+++++..|+..|+ ++.+++|+.+
T Consensus       124 ~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~  159 (288)
T PRK12749        124 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE  159 (288)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence            578999995 6669999999999997 8999999854

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.88  E-value=0.12  Score=37.10  Aligned_cols=38  Identities=29%  Similarity=0.447  Sum_probs=32.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|.|+++++|..+++.....|++|+++.++++..
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~  184 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAA  184 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHH
Confidence            45899999999999999888888899999998887644

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]

Probab=95.88  E-value=0.056  Score=37.92  Aligned_cols=36  Identities=39%  Similarity=0.489  Sum_probs=31.3

Q ss_pred             CCcEEEEecCCcchHHH-----HHHHHHHcCCeEEEeecCc
Q psy7029           1 MSKIIVVTGASVGIGAA-----ILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r~~   36 (125)
                      |+++++||.|-||.|+.     +.-.|++.|.+|++++-+-
T Consensus         1 M~~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~Di   41 (272)
T COG2894           1 MARIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFDI   41 (272)
T ss_pred             CceEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecCc
Confidence            88999999999998864     7788999999999988763

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.88  E-value=0.063  Score=38.04  Aligned_cols=38  Identities=32%  Similarity=0.459  Sum_probs=33.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+++++|..++..+...|+.|+.+.++.+..
T Consensus       140 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  177 (323)
T cd08241         140 GETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKL  177 (323)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHH
Confidence            57899999999999999998888999999998876543

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.86  E-value=0.14  Score=36.68  Aligned_cols=38  Identities=16%  Similarity=0.275  Sum_probs=32.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|.|+++++|..+++.+...|+.++++.++.+..
T Consensus       141 ~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  178 (334)
T PTZ00354        141 GQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKV  178 (334)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            56899999999999999998888999988887776543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.83  E-value=0.19  Score=34.72  Aligned_cols=33  Identities=24%  Similarity=0.287  Sum_probs=28.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      ..+++|.| .||+|..+++.|++.|. ++.+++.+
T Consensus        28 ~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35678888 68999999999999998 58888887

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.82  E-value=0.11  Score=38.42  Aligned_cols=37  Identities=24%  Similarity=0.406  Sum_probs=29.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...+..+...|+ +|+++++++++.
T Consensus       192 g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~  229 (371)
T cd08281         192 GQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKL  229 (371)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHH
Confidence            578999985 8999998887777898 688888877654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.81  E-value=0.038  Score=40.27  Aligned_cols=30  Identities=17%  Similarity=0.245  Sum_probs=25.2

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      ++|.| .||+|-.+++.|+..|. ++++++.+
T Consensus         2 VLIvG-aGGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           2 CLLLG-AGTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            67777 67999999999999997 77777765

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK05086 malate dehydrogenase; Provisional

Probab=95.81  E-value=0.042  Score=40.17  Aligned_cols=34  Identities=26%  Similarity=0.336  Sum_probs=27.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHH-c--CCeEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAA-K--GHQVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~-~--g~~v~~~~r~~   36 (125)
                      ++++|.|++|++|.+++..|.. .  +..++++++++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~   37 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP   37 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC
Confidence            3678999999999999998855 2  35788888764

>PRK07877 hypothetical protein; Provisional

Probab=95.78  E-value=0.089  Score=42.74  Aligned_cols=96  Identities=21%  Similarity=0.217  Sum_probs=58.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ..+++|.|+  |+|..++..|++.|.  ++++++.+.=...      |.....   -.....+..+.....+.+...++.
T Consensus       107 ~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D~ve~s------NLnRq~---~~~~diG~~Kv~~a~~~l~~inp~  175 (722)
T PRK07877        107 RLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFDTLELS------NLNRVP---AGVFDLGVNKAVVAARRIAELDPY  175 (722)
T ss_pred             cCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCCEEccc------cccccc---CChhhcccHHHHHHHHHHHHHCCC
Confidence            457899999  499999999999994  8888887632110      000000   011112233333444555556666


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCc
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA  116 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~na  116 (125)
                      .++..+...++ ++.+.++++       .+|++|.|.
T Consensus       176 i~v~~~~~~i~-~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        176 LPVEVFTDGLT-EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             CEEEEEeccCC-HHHHHHHhc-------CCCEEEECC
Confidence            67888888777 566666655       578777654

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.76  E-value=0.094  Score=39.94  Aligned_cols=35  Identities=26%  Similarity=0.496  Sum_probs=30.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +|+++|+|.+ +.|.++++.|+++|+.|.+.+....
T Consensus         5 ~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          5 NKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            6889999975 8999999999999999999887543

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.73  E-value=0.11  Score=36.95  Aligned_cols=38  Identities=24%  Similarity=0.383  Sum_probs=32.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.|+++++|..+++.....|++|+++.++.+..
T Consensus       143 g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  180 (320)
T cd08243         143 GDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA  180 (320)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            57899999999999999888888899999988876543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>KOG1431|consensus

Probab=95.72  E-value=0.046  Score=38.56  Aligned_cols=25  Identities=36%  Similarity=0.602  Sum_probs=23.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH   27 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~   27 (125)
                      ++++|||++|=.|.++.+.+..+|.
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~   26 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGF   26 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCC
Confidence            7899999999999999999988875

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.72  E-value=0.13  Score=38.80  Aligned_cols=39  Identities=8%  Similarity=0.003  Sum_probs=30.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC---eEEEeecCchhhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH---QVIGFARRAEMID   40 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~   40 (125)
                      |.+++|.|+++++|...+..+...|+   +|++++++.++.+
T Consensus       176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~  217 (410)
T cd08238         176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLA  217 (410)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHH
Confidence            56899999999999998776655554   7999988877553

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.71  E-value=0.12  Score=38.13  Aligned_cols=37  Identities=22%  Similarity=0.371  Sum_probs=30.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      |++++|.|+ +++|...+......|+. |++++++.+..
T Consensus       177 g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~  214 (358)
T TIGR03451       177 GDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKL  214 (358)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            678999985 89999988877778985 88888876654

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.69  E-value=0.15  Score=35.76  Aligned_cols=34  Identities=24%  Similarity=0.264  Sum_probs=28.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ..+++|.| .||+|..+++.|++.|. ++++++.+.
T Consensus        11 ~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755          11 NAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            35677887 67999999999999997 888888763

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.67  E-value=0.16  Score=37.18  Aligned_cols=37  Identities=24%  Similarity=0.494  Sum_probs=32.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|.|+ +++|...+..+...|++|++++++++..
T Consensus       167 g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~  203 (349)
T TIGR03201       167 GDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKL  203 (349)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            678999998 9999998888888899999998887654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02827 Alcohol dehydrogenase-like

Probab=95.64  E-value=0.17  Score=37.75  Aligned_cols=37  Identities=19%  Similarity=0.358  Sum_probs=28.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...++.....|+. |++++++++..
T Consensus       194 g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~  231 (378)
T PLN02827        194 GSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKA  231 (378)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH
Confidence            678999985 89999988877778984 77777766543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.62  E-value=0.033  Score=37.28  Aligned_cols=37  Identities=35%  Similarity=0.481  Sum_probs=32.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+++.|.| .|.||+.+++.|...|++|++++|+....
T Consensus        36 g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~   72 (178)
T PF02826_consen   36 GKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPE   72 (178)
T ss_dssp             TSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred             CCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChh
Confidence            78899998 68999999999999999999999998754

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.61  E-value=0.15  Score=37.01  Aligned_cols=34  Identities=26%  Similarity=0.392  Sum_probs=30.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      |.+++|+|+++++|..+++.....|++|+++.++
T Consensus       163 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         163 GKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            6789999999999999999888889998887764

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.58  E-value=0.15  Score=36.80  Aligned_cols=37  Identities=35%  Similarity=0.538  Sum_probs=28.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .+++++|+++++|...+......|++++++.++.++.
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~  181 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQV  181 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            3445558999999998876667799999988876544

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.56  E-value=0.18  Score=36.09  Aligned_cols=38  Identities=18%  Similarity=0.391  Sum_probs=32.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|.|+++++|..+++.+...|++++++.++.+..
T Consensus       139 ~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~  176 (323)
T cd05282         139 GDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV  176 (323)
T ss_pred             CCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH
Confidence            56899999999999999998888999999988876543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.55  E-value=0.1  Score=32.51  Aligned_cols=27  Identities=30%  Similarity=0.474  Sum_probs=22.5

Q ss_pred             chHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029          13 GIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus        13 giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+|...+..+...|++|+++++++.+.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~   27 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKL   27 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHH
Confidence            578888888888899999999987654

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=95.54  E-value=0.12  Score=37.66  Aligned_cols=35  Identities=20%  Similarity=0.351  Sum_probs=29.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~   39 (125)
                      ++.|.|+ |++|..++..|+..|  .++++++++.+..
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~   38 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKA   38 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchh
Confidence            5677885 899999999999998  4899999987654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.49  E-value=0.17  Score=37.40  Aligned_cols=35  Identities=23%  Similarity=0.277  Sum_probs=28.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |++++|.|+ +++|...+......|+++++++.+.+
T Consensus       184 g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~  218 (360)
T PLN02586        184 GKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSN  218 (360)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            578899775 89999988877778999888776654

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.48  E-value=0.18  Score=36.95  Aligned_cols=37  Identities=24%  Similarity=0.312  Sum_probs=30.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +++++|+| ++++|..+++.+...|+ +|+++.++++..
T Consensus       178 g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~  215 (361)
T cd08231         178 GDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERL  215 (361)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            56889997 58999999988888899 899888776543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN02928 oxidoreductase family protein

Probab=95.45  E-value=0.1  Score=38.78  Aligned_cols=35  Identities=20%  Similarity=0.316  Sum_probs=31.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||++.|.| .|.||+.+++.|...|++|++++|+..
T Consensus       159 gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        159 GKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            78899998 589999999999999999999998743

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.45  E-value=0.21  Score=37.37  Aligned_cols=37  Identities=19%  Similarity=0.290  Sum_probs=31.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +.+++|.|+++++|..++..+...|++++++.++.+.
T Consensus       190 g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~  226 (398)
T TIGR01751       190 GDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEK  226 (398)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence            5689999999999999988888889998888776543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.43  E-value=0.036  Score=36.99  Aligned_cols=36  Identities=22%  Similarity=0.273  Sum_probs=32.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++.++|.|++.-+|..+++.|.++|++|.++.|+.+
T Consensus        44 gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~   79 (168)
T cd01080          44 GKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK   79 (168)
T ss_pred             CCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence            689999998666799999999999999999999864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.42  E-value=0.16  Score=34.62  Aligned_cols=33  Identities=30%  Similarity=0.437  Sum_probs=26.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      ..+++|.| .+|+|..+++.|+..|. ++.+++.+
T Consensus        21 ~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          21 SARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             hCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            35677887 55699999999999997 68788775

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.42  E-value=0.076  Score=40.82  Aligned_cols=34  Identities=26%  Similarity=0.158  Sum_probs=29.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++.++|.|+ |++|.++|+.|.++|++|.+++++.
T Consensus        16 ~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~   49 (480)
T PRK01438         16 GLRVVVAGL-GVSGFAAADALLELGARVTVVDDGD   49 (480)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            578899985 6799999999999999999998764

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.41  E-value=0.038  Score=38.15  Aligned_cols=36  Identities=28%  Similarity=0.290  Sum_probs=31.6

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.|.|+++.+|.+++..|++.|++|.+.+|+++..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~   37 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA   37 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence            467888889999999999999999999999987654

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.40  E-value=0.11  Score=35.98  Aligned_cols=35  Identities=23%  Similarity=0.254  Sum_probs=29.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +..+|+.||+.|   .=+..|+++|++|+.++.++...
T Consensus        35 ~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai   69 (213)
T TIGR03840        35 GARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAV   69 (213)
T ss_pred             CCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHH
Confidence            357999999877   45778899999999999998755

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.40  E-value=0.2  Score=35.30  Aligned_cols=38  Identities=26%  Similarity=0.350  Sum_probs=32.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|.|+++++|..+++.....|+.++++.++++..
T Consensus       137 g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  174 (320)
T cd05286         137 GDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKA  174 (320)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence            57899999999999999988888899999988766543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK12767 carbamoyl phosphate synthase-like protein; Provisional

Probab=95.39  E-value=0.13  Score=37.36  Aligned_cols=32  Identities=28%  Similarity=0.294  Sum_probs=27.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG--HQVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~   36 (125)
                      +++||||++.+.  .+++.|.+.|  ++|++++.++
T Consensus         2 ~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~   35 (326)
T PRK12767          2 MNILVTSAGRRV--QLVKALKKSLLKGRVIGADISE   35 (326)
T ss_pred             ceEEEecCCccH--HHHHHHHHhccCCEEEEECCCC
Confidence            789999998777  8899999884  9999998774

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.39  E-value=0.18  Score=36.83  Aligned_cols=37  Identities=27%  Similarity=0.243  Sum_probs=30.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|+ .|+++.++.+..
T Consensus       173 g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~  210 (351)
T cd08233         173 GDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARR  210 (351)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            578999985 7999999888888899 788888776544

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>KOG0023|consensus

Probab=95.37  E-value=0.11  Score=38.34  Aligned_cols=36  Identities=19%  Similarity=0.205  Sum_probs=28.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHH-HcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALA-AKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~-~~g~~v~~~~r~~~~~   39 (125)
                      |+++-|+|+++ ||.- +-+++ ..|++|++++++..+.
T Consensus       182 G~~vgI~GlGG-LGh~-aVq~AKAMG~rV~vis~~~~kk  218 (360)
T KOG0023|consen  182 GKWVGIVGLGG-LGHM-AVQYAKAMGMRVTVISTSSKKK  218 (360)
T ss_pred             CcEEEEecCcc-cchH-HHHHHHHhCcEEEEEeCCchhH
Confidence            78999999877 8865 55555 4599999999987544

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.36  E-value=0.22  Score=36.79  Aligned_cols=37  Identities=16%  Similarity=0.313  Sum_probs=29.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.| .+++|...++.....|+ +|++++++.+..
T Consensus       185 g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~  222 (365)
T cd08277         185 GSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKF  222 (365)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            57889997 48999998887777898 698898876544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.33  E-value=0.17  Score=35.95  Aligned_cols=37  Identities=24%  Similarity=0.279  Sum_probs=29.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      +++++|.|+ +++|...++.+...|++ |+++++++++.
T Consensus       121 g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366       121 GRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            578899986 78999988877778986 88887766544

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.30  E-value=0.13  Score=34.55  Aligned_cols=43  Identities=26%  Similarity=0.325  Sum_probs=32.7

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHH
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAF   48 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   48 (125)
                      +-|.|+ |-+|+.++..|+..|++|.+++++++...........
T Consensus         2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            456775 8899999999999999999999998876554444433

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.30  E-value=0.14  Score=37.65  Aligned_cols=33  Identities=30%  Similarity=0.348  Sum_probs=28.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      |++++|+|+ +++|...+..+...|++|++++|+
T Consensus       173 g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         173 PRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            568899985 899999888777789999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.29  E-value=0.17  Score=37.62  Aligned_cols=38  Identities=21%  Similarity=0.343  Sum_probs=32.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|+|+++++|...+..+...|++++++.++.++.
T Consensus       194 g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~  231 (393)
T cd08246         194 GDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKA  231 (393)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence            56899999999999999887778899988888776544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.25  E-value=0.17  Score=36.98  Aligned_cols=37  Identities=32%  Similarity=0.519  Sum_probs=30.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH-cCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA-KGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~   39 (125)
                      |.+++|++|++..|.-..+ +++ .|++|+.+.-+.++.
T Consensus       151 GetvvVSaAaGaVGsvvgQ-iAKlkG~rVVGiaGg~eK~  188 (340)
T COG2130         151 GETVVVSAAAGAVGSVVGQ-IAKLKGCRVVGIAGGAEKC  188 (340)
T ss_pred             CCEEEEEecccccchHHHH-HHHhhCCeEEEecCCHHHH
Confidence            7899999999999976554 554 699999998887655

>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins

Probab=95.24  E-value=0.4  Score=34.71  Aligned_cols=85  Identities=14%  Similarity=0.246  Sum_probs=48.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +.++||| -||-|++.|...++. ||.  |+++-+..+.                          .+..+.........+
T Consensus         2 ~~vIiTG-lSGaGKs~Al~~lED~Gy~--cvDNlP~~Ll--------------------------~~l~~~~~~~~~~~~   52 (284)
T PF03668_consen    2 ELVIITG-LSGAGKSTALRALEDLGYY--CVDNLPPSLL--------------------------PQLIELLAQSNSKIE   52 (284)
T ss_pred             eEEEEeC-CCcCCHHHHHHHHHhcCee--EEcCCcHHHH--------------------------HHHHHHHHhcCCCCc
Confidence            7889998 667799999888875 764  4566655331                          111111111112224


Q ss_pred             eeEEEecCCChHHHHHHHH---HHHhhcCCccEEEeCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFD---WINNKFGHIDVMINNA  116 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~---~~~~~~g~id~lv~na  116 (125)
                      -..+.+|+.+.+....+.+   ++.+..-.+.+|+--|
T Consensus        53 ~~Ai~iD~R~~~~~~~~~~~~~~l~~~~~~~~ilFLdA   90 (284)
T PF03668_consen   53 KVAIVIDIRSREFFEDLFEALDELRKKGIDVRILFLDA   90 (284)
T ss_pred             eEEEEEeCCChHHHHHHHHHHHHHHhcCCceEEEEEEC
Confidence            4667788887765544443   3333433566666544

This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding

>PRK14851 hypothetical protein; Provisional

Probab=95.22  E-value=0.2  Score=40.47  Aligned_cols=98  Identities=15%  Similarity=0.163  Sum_probs=54.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ..+++|.| .||+|..+++.|++.|. ++.+++.+.=...   -+.++.....     ...+..+.+-..+.+...++..
T Consensus        43 ~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~s---NLNRQ~~~~~-----~dvG~~Kv~v~~~~l~~inP~~  113 (679)
T PRK14851         43 EAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPV---NVNRQFGARV-----PSFGRPKLAVMKEQALSINPFL  113 (679)
T ss_pred             cCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEeccc---ccccCcCcCh-----hhCCCHHHHHHHHHHHHhCCCC
Confidence            35778888 77999999999999997 7777776531110   0000000000     0112222233334444455556


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA  116 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~na  116 (125)
                      ++..+...++ .+.+..+++       .+|++|.+.
T Consensus       114 ~I~~~~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        114 EITPFPAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             eEEEEecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            7777777775 444555554       577777554

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.21  E-value=0.36  Score=30.38  Aligned_cols=99  Identities=19%  Similarity=0.358  Sum_probs=53.7

Q ss_pred             EEEEecCCcchHHHHHHHHHH-cCCeEEE-eecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           4 IIVVTGASVGIGAAILRALAA-KGHQVIG-FARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~-~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .+.|.|++|-+|+.+++.+.+ .+++++. ++|+.+.... .       +...-.+......... ..++.+... .   
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g-~-------d~g~~~~~~~~~~~v~-~~l~~~~~~-~---   68 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVG-K-------DVGELAGIGPLGVPVT-DDLEELLEE-A---   68 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTT-S-------BCHHHCTSST-SSBEB-S-HHHHTTH-----
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCccccc-c-------hhhhhhCcCCcccccc-hhHHHhccc-C---
Confidence            578899999999999999998 5777555 4555421100 0       0000000000001001 111222211 1   


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                        -+..|++.++.+...++...+.  ++..++-..|+.
T Consensus        69 --DVvIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~~  102 (124)
T PF01113_consen   69 --DVVIDFTNPDAVYDNLEYALKH--GVPLVIGTTGFS  102 (124)
T ss_dssp             --SEEEEES-HHHHHHHHHHHHHH--T-EEEEE-SSSH
T ss_pred             --CEEEEcCChHHhHHHHHHHHhC--CCCEEEECCCCC
Confidence              1566999999999999988776  677777676654

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.20  E-value=0.26  Score=36.82  Aligned_cols=35  Identities=29%  Similarity=0.338  Sum_probs=28.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |.+++|.|+ +++|...+......|++|++++++.+
T Consensus       179 g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~  213 (375)
T PLN02178        179 GKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSE  213 (375)
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChH
Confidence            568888885 89999988877788999998887654

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.19  E-value=0.14  Score=37.13  Aligned_cols=38  Identities=26%  Similarity=0.377  Sum_probs=33.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|.|+++++|..+++.+...|++|+++.++++..
T Consensus       166 ~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~  203 (341)
T cd08297         166 GDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKL  203 (341)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            56899999999999999998888999999998886543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.16  E-value=0.13  Score=38.38  Aligned_cols=34  Identities=21%  Similarity=0.343  Sum_probs=28.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |+++|+|++ .+|+.+++.+.+.|+++++++.++.
T Consensus        13 ~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~   46 (395)
T PRK09288         13 TRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYAN   46 (395)
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            588999865 5888999999999999999988754

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.09  E-value=0.17  Score=32.25  Aligned_cols=96  Identities=23%  Similarity=0.310  Sum_probs=49.4

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEee-cCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFA-RRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++-|.|+ |-+|.++++.|.+.|+.|..+. |+....+.......                   ......+........+
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~-------------------~~~~~~~~~~~~~aDl   71 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIG-------------------AGAILDLEEILRDADL   71 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--T-------------------T-----TTGGGCC-SE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccc-------------------cccccccccccccCCE
Confidence            4556774 7889999999999999988764 54433211111100                   0000111111122244


Q ss_pred             eEEEecCCChHHHHHHHHHHHhh--cCCccEEEeCcccCCCc
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNK--FGHIDVMINNAGVNEFA  122 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~--~g~id~lv~nag~~~~~  122 (125)
                      .++  -+.|. .+..+.+++...  +.+=.+++|++|-..-.
T Consensus        72 v~i--avpDd-aI~~va~~La~~~~~~~g~iVvHtSGa~~~~  110 (127)
T PF10727_consen   72 VFI--AVPDD-AIAEVAEQLAQYGAWRPGQIVVHTSGALGSD  110 (127)
T ss_dssp             EEE---S-CC-HHHHHHHHHHCC--S-TT-EEEES-SS--GG
T ss_pred             EEE--EechH-HHHHHHHHHHHhccCCCCcEEEECCCCChHH
Confidence            444  34443 788888888765  33346899999987644

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.03  E-value=0.047  Score=41.74  Aligned_cols=35  Identities=31%  Similarity=0.428  Sum_probs=31.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      ++.|.||.|.+|.++++.|.+.|++|++++|+++.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            57889989999999999999999999999998654

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.02  E-value=0.18  Score=36.20  Aligned_cols=34  Identities=26%  Similarity=0.276  Sum_probs=27.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ...++|.| .||+|..+++.|++.|. ++.+++.+.
T Consensus        30 ~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         30 DAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            35677777 67999999999999994 888887763

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.98  E-value=0.33  Score=36.67  Aligned_cols=34  Identities=26%  Similarity=0.287  Sum_probs=28.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ..+++|.| .||+|..+++.|++.|. ++.+++.+.
T Consensus        42 ~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~   76 (392)
T PRK07878         42 NARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDV   76 (392)
T ss_pred             cCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            35678887 67999999999999997 788887763

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.91  E-value=0.035  Score=33.84  Aligned_cols=34  Identities=24%  Similarity=0.269  Sum_probs=30.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      |+.++|.|+ |.+|..-++.|++.|++|.+++...
T Consensus         7 ~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    7 GKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             T-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            789999995 7899999999999999999999885

>KOG4022|consensus

Probab=94.85  E-value=0.46  Score=31.95  Aligned_cols=79  Identities=13%  Similarity=0.150  Sum_probs=54.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ..++|-|+-+.+|.++++.|-.+++-|.-++.++...                                      .. .-
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~--------------------------------------Ad-~s   44 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ--------------------------------------AD-SS   44 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc--------------------------------------cc-ce
Confidence            4678899999999999999999999888777654211                                      00 12


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcC--CccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFG--HIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g--~id~lv~nag~~~  120 (125)
                      ..+..|-+=-|+-..+.+++.+..+  ++|.+++-||-+.
T Consensus        45 I~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGWA   84 (236)
T KOG4022|consen   45 ILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWA   84 (236)
T ss_pred             EEecCCcchhHHHHHHHHHHHHhhcccccceEEEeecccc
Confidence            2344444444555666777666543  6999998888654

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=94.83  E-value=0.35  Score=35.95  Aligned_cols=37  Identities=19%  Similarity=0.298  Sum_probs=30.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.| .+++|..++..+...|+ +|++++++.+..
T Consensus       191 g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~  228 (373)
T cd08299         191 GSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKF  228 (373)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            56888996 58999999888888898 799998876544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK07411 hypothetical protein; Validated

Probab=94.83  E-value=0.3  Score=36.85  Aligned_cols=97  Identities=16%  Similarity=0.255  Sum_probs=52.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .+++|.| .||+|..+++.|+..|. ++.+++.+.-...   .+-++..  .   .....+..+.....+.+...++..+
T Consensus        39 ~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~s---NL~RQ~l--~---~~~dvG~~Ka~~a~~~l~~~np~v~  109 (390)
T PRK07411         39 ASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSS---NLQRQVI--H---GTSWVGKPKIESAKNRILEINPYCQ  109 (390)
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEeccc---ccCcCcc--c---ChHHCCCcHHHHHHHHHHHHCCCCe
Confidence            4678887 67999999999999997 7888877632110   0000000  0   0000122233344455555555556


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA  116 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~na  116 (125)
                      +..+...++.. ...+++.       ..|++|.+.
T Consensus       110 v~~~~~~~~~~-~~~~~~~-------~~D~Vvd~~  136 (390)
T PRK07411        110 VDLYETRLSSE-NALDILA-------PYDVVVDGT  136 (390)
T ss_pred             EEEEecccCHH-hHHHHHh-------CCCEEEECC
Confidence            77666666542 3333333       567777654

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.82  E-value=0.38  Score=34.89  Aligned_cols=37  Identities=19%  Similarity=0.402  Sum_probs=31.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|.| ++++|..+++.+...|++|++++++++..
T Consensus       164 ~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~  200 (333)
T cd08296         164 GDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKA  200 (333)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHH
Confidence            57899999 79999998888888899999998876543

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=94.77  E-value=0.28  Score=35.79  Aligned_cols=37  Identities=22%  Similarity=0.357  Sum_probs=29.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      |++++|+| .+++|...++.+...|++ |++++++.+..
T Consensus       161 g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~  198 (347)
T PRK10309        161 GKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKL  198 (347)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHH
Confidence            57899997 588999988887788997 67788776644

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=94.75  E-value=0.28  Score=35.07  Aligned_cols=37  Identities=30%  Similarity=0.469  Sum_probs=31.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .+++|.|+++++|..++......|++|+++.++.+..
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~  184 (325)
T cd05280         148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQA  184 (325)
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            4799999999999999887778899999998887644

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.74  E-value=0.69  Score=34.10  Aligned_cols=37  Identities=22%  Similarity=0.247  Sum_probs=30.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      +++-|.| +|-+|..++..|+..|++|++.+++++...
T Consensus         8 ~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~   44 (321)
T PRK07066          8 KTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEA   44 (321)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence            4455666 577999999999999999999999887553

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.73  E-value=0.072  Score=36.52  Aligned_cols=34  Identities=15%  Similarity=0.224  Sum_probs=30.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ||.++|.|+ |.+|...++.|.+.|++|+++.+..
T Consensus        10 ~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718         10 NKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            789999995 7899999999999999999998754

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=94.69  E-value=0.18  Score=36.46  Aligned_cols=37  Identities=30%  Similarity=0.437  Sum_probs=29.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~   39 (125)
                      +++++|.|+ +++|..+++.+...| .+|+++.++++..
T Consensus       168 ~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~  205 (340)
T cd05284         168 GSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEAL  205 (340)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            568999995 559999988888888 8999988876543

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.65  E-value=0.075  Score=35.30  Aligned_cols=37  Identities=30%  Similarity=0.266  Sum_probs=29.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ||+++|.| -+-+|+.+|+.|...|++|+++..++-..
T Consensus        23 Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~a   59 (162)
T PF00670_consen   23 GKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRA   59 (162)
T ss_dssp             TSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH
T ss_pred             CCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHH
Confidence            78999998 67899999999999999999999987543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=94.63  E-value=0.27  Score=35.74  Aligned_cols=30  Identities=30%  Similarity=0.529  Sum_probs=25.2

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      ++|.| .||+|-.+++.|+..|. ++.+++.+
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D   32 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMD   32 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            56777 77999999999999997 77777765

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=94.61  E-value=0.24  Score=35.63  Aligned_cols=38  Identities=21%  Similarity=0.265  Sum_probs=32.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.|+.+.+|..+++.+...|++++.+.++.+..
T Consensus       141 g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~  178 (327)
T PRK10754        141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKA  178 (327)
T ss_pred             CCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            57899999999999999887778899999888776543

>PRK08328 hypothetical protein; Provisional

Probab=94.61  E-value=0.24  Score=34.67  Aligned_cols=34  Identities=24%  Similarity=0.403  Sum_probs=28.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      +.+++|.| .||+|..+++.|++.|. ++.+++.+.
T Consensus        27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            45678887 67999999999999997 788887764

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=94.59  E-value=0.55  Score=34.12  Aligned_cols=37  Identities=22%  Similarity=0.366  Sum_probs=31.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|.| .+++|..++..+...|++|+++.++.+..
T Consensus       166 ~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~  202 (345)
T cd08260         166 GEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKL  202 (345)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHH
Confidence            56899999 68999999888888899999998876544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=94.56  E-value=0.22  Score=39.99  Aligned_cols=32  Identities=16%  Similarity=0.248  Sum_probs=27.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      .+++|.| .||+|-.+++.|++-|. ++++++.+
T Consensus       339 ~kVLIvG-aGGLGs~VA~~La~~GVg~ItlVD~D  371 (664)
T TIGR01381       339 LKVLLLG-AGTLGCNVARCLIGWGVRHITFVDNG  371 (664)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            4678887 68999999999999997 78888765

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.56  E-value=0.086  Score=36.44  Aligned_cols=35  Identities=34%  Similarity=0.374  Sum_probs=28.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +++.| +|+|-||.+++++|++.|++|++-.|+.+.
T Consensus         2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            45554 458899999999999999999999776553

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.52  E-value=0.16  Score=40.44  Aligned_cols=95  Identities=17%  Similarity=0.311  Sum_probs=54.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCcc-ccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV-IGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ..++|.| .+.+|+.+++.|.++|.++++++++++..+...           ..+... .+.....+.++...-    .+
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~-----------~~g~~v~~GDat~~~~L~~agi----~~  464 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMR-----------KYGYKVYYGDATQLELLRAAGA----EK  464 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHH-----------hCCCeEEEeeCCCHHHHHhcCC----cc
Confidence            3567777 678899999999999999999999877542110           001000 111112222222211    13


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEE
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMI  113 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv  113 (125)
                      ...+.+-..|++.-..++..+++.++.+.+++
T Consensus       465 A~~vv~~~~d~~~n~~i~~~~r~~~p~~~Iia  496 (601)
T PRK03659        465 AEAIVITCNEPEDTMKIVELCQQHFPHLHILA  496 (601)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHHCCCCeEEE
Confidence            33444445555666666677776666666654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.50  E-value=0.13  Score=33.26  Aligned_cols=36  Identities=25%  Similarity=0.288  Sum_probs=33.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||.++|.|.+.-.|+.++..|.++|+.|.++.++..
T Consensus        28 gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          28 GKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            789999999999999999999999999999986554

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.47  E-value=0.29  Score=37.29  Aligned_cols=37  Identities=27%  Similarity=0.363  Sum_probs=30.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +++++|.| .|=+|.-+++.|++.|. .++++.|+.+..
T Consensus       178 ~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA  215 (414)
T COG0373         178 DKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERA  215 (414)
T ss_pred             cCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHH
Confidence            57899998 45688999999999995 788888887655

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.47  E-value=0.23  Score=35.07  Aligned_cols=35  Identities=23%  Similarity=0.298  Sum_probs=30.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+.+|=.||++|   .+.+.+|+.|++|..++-+++..
T Consensus        60 g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I   94 (243)
T COG2227          60 GLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPI   94 (243)
T ss_pred             CCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHH
Confidence            567788899988   78999999999999999988765

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.45  E-value=0.59  Score=34.52  Aligned_cols=36  Identities=19%  Similarity=0.321  Sum_probs=31.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |+++.|.| .|.||+++++.|...|++|++.+|+...
T Consensus       146 g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        146 NMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            67788887 5779999999999999999999998653

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.44  E-value=0.81  Score=33.24  Aligned_cols=37  Identities=22%  Similarity=0.228  Sum_probs=31.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      +++.|.| .|-+|.+++..|++.|++|++++++++...
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~   39 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAA   39 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHH
Confidence            4577888 677999999999999999999999976543

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.44  E-value=0.22  Score=36.55  Aligned_cols=34  Identities=24%  Similarity=0.212  Sum_probs=30.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ||++.|.| .|.||+.+++.+...|++|++.+|..
T Consensus       148 gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~  181 (317)
T PRK06487        148 GKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPG  181 (317)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCC
Confidence            68889998 68999999999999999999998863

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.36  E-value=0.12  Score=37.52  Aligned_cols=36  Identities=28%  Similarity=0.299  Sum_probs=32.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||.++|.|.+.-+|+.++..|.++|+.|+++.+...
T Consensus       158 Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~  193 (286)
T PRK14175        158 GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK  193 (286)
T ss_pred             CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch
Confidence            799999999999999999999999999999887653

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.35  E-value=0.14  Score=36.84  Aligned_cols=37  Identities=24%  Similarity=0.293  Sum_probs=31.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++.++|.| +||.+++++..|++.|+ +|.+++|+.++.
T Consensus       122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a  159 (272)
T PRK12550        122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTG  159 (272)
T ss_pred             CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHH
Confidence            35788888 58999999999999997 699999997655

>smart00829 PKS_ER Enoylreductase

Probab=94.33  E-value=0.36  Score=33.47  Aligned_cols=38  Identities=21%  Similarity=0.319  Sum_probs=32.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.|+++++|..++......|++|+.+.++.+..
T Consensus       105 g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  142 (288)
T smart00829      105 GESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKR  142 (288)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            56889999999999999887778899999998876644

Enoylreductase in Polyketide synthases.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.30  E-value=0.49  Score=34.35  Aligned_cols=35  Identities=37%  Similarity=0.572  Sum_probs=30.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      +.+++|.|+++++|..++......|++++++.++.
T Consensus       178 g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~  212 (350)
T cd08274         178 GETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA  212 (350)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence            57899999999999999888888899988887643

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=94.27  E-value=0.38  Score=34.19  Aligned_cols=37  Identities=35%  Similarity=0.466  Sum_probs=30.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      +..++|+| ++++|..+++.+...|++ ++++.++++..
T Consensus       130 ~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~  167 (312)
T cd08269         130 GKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARL  167 (312)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence            56789996 678999999888888998 88888776543

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=94.26  E-value=0.42  Score=34.78  Aligned_cols=37  Identities=19%  Similarity=0.164  Sum_probs=28.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      +++++|+| ++++|..+++.+...|.+ |+++.++++..
T Consensus       163 g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~  200 (343)
T cd05285         163 GDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRL  200 (343)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence            56889986 578999988877778987 88887776543

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14852 hypothetical protein; Provisional

Probab=94.25  E-value=0.43  Score=40.11  Aligned_cols=97  Identities=16%  Similarity=0.172  Sum_probs=54.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .+++|.| .||+|..+++.|+..|. ++.+++.+.=...   .+.++...     ....++..+.....+.+...++..+
T Consensus       333 srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~S---NLNRQ~l~-----~~~dIG~~Kaevaa~~l~~INP~v~  403 (989)
T PRK14852        333 SRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPV---NLNRQYGA-----SIASFGRGKLDVMTERALSVNPFLD  403 (989)
T ss_pred             CcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEeccc---ccccccCC-----ChhhCCChHHHHHHHHHHHHCCCCe
Confidence            4677887 67999999999999997 7777776531110   00000000     0011222233344455555556667


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA  116 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~na  116 (125)
                      +..+...++ ++.+..+++       .+|++|.+.
T Consensus       404 I~~~~~~I~-~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        404 IRSFPEGVA-AETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             EEEEecCCC-HHHHHHHhh-------CCCEEEECC
Confidence            777766664 445555544       577777644

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=94.24  E-value=0.38  Score=35.94  Aligned_cols=34  Identities=26%  Similarity=0.346  Sum_probs=29.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +++.|.|++ -+|+.++....+.|++|++++.++.
T Consensus         3 ~~igilG~G-ql~~ml~~aa~~lG~~v~~~d~~~~   36 (372)
T PRK06019          3 KTIGIIGGG-QLGRMLALAAAPLGYKVIVLDPDPD   36 (372)
T ss_pred             CEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCC
Confidence            788899974 7999999999999999999988653

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=94.21  E-value=0.094  Score=39.29  Aligned_cols=35  Identities=20%  Similarity=0.286  Sum_probs=31.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      .+++.|.||.|.+|.++++.|.+.|+.|.+++|+.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            36788999999999999999999999999999864

>PRK07206 hypothetical protein; Provisional

Probab=94.17  E-value=0.32  Score=36.60  Aligned_cols=35  Identities=20%  Similarity=0.318  Sum_probs=29.9

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      |+|+++|.|+ +..|..+++.+.+.|+++++++.+.
T Consensus         1 ~~k~~liv~~-~~~~~~~~~a~~~~G~~~v~v~~~~   35 (416)
T PRK07206          1 MMKKVVIVDP-FSSGKFLAPAFKKRGIEPIAVTSSC   35 (416)
T ss_pred             CCCeEEEEcC-CchHHHHHHHHHHcCCeEEEEEcCC
Confidence            7899999997 4668899999999999998887664

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=94.16  E-value=0.56  Score=33.97  Aligned_cols=37  Identities=22%  Similarity=0.157  Sum_probs=29.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      +++++|+| ++++|..+++.+...|++ ++++.++.+..
T Consensus       166 g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~  203 (343)
T cd08235         166 GDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRL  203 (343)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence            57889996 689999988877778998 88777766544

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.16  E-value=0.37  Score=35.33  Aligned_cols=35  Identities=17%  Similarity=0.280  Sum_probs=30.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||++.|.| .|.||+.+++.|...|++|++++++.+
T Consensus       136 g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        136 DFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            67888887 788999999999999999999998654

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.16  E-value=0.21  Score=39.99  Aligned_cols=95  Identities=16%  Similarity=0.290  Sum_probs=56.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCcc-ccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV-IGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +.++|.| .+.+|+.+++.|.++|.++++++.+++..+..   .+        .+... .+...+.+.++...    -.+
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~---~~--------~g~~v~~GDat~~~~L~~ag----i~~  464 (621)
T PRK03562        401 PRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL---RK--------FGMKVFYGDATRMDLLESAG----AAK  464 (621)
T ss_pred             CcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHH---Hh--------cCCeEEEEeCCCHHHHHhcC----CCc
Confidence            4567777 66789999999999999999999988754211   10        01111 11111222222221    113


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEE
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMI  113 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv  113 (125)
                      ...+.+-..|++.-..++..+++.++.+.+++
T Consensus       465 A~~vvv~~~d~~~n~~i~~~ar~~~p~~~iia  496 (621)
T PRK03562        465 AEVLINAIDDPQTSLQLVELVKEHFPHLQIIA  496 (621)
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEE
Confidence            44455555666777777777777777776654

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.12  E-value=0.22  Score=34.19  Aligned_cols=35  Identities=23%  Similarity=0.284  Sum_probs=30.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |+.++|.| +|.+|..-++.|++.|++|++++....
T Consensus         9 gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         9 GRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            78899998 567888999999999999999987654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=94.09  E-value=0.63  Score=33.71  Aligned_cols=37  Identities=24%  Similarity=0.357  Sum_probs=29.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +++++|+| .+++|..+++.+...|+ .++++.++++..
T Consensus       166 ~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~  203 (339)
T cd08232         166 GKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPL  203 (339)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence            56889977 57999998887777898 788887765543

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.08  E-value=0.12  Score=37.56  Aligned_cols=35  Identities=26%  Similarity=0.166  Sum_probs=32.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEee-cCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFA-RRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~-r~~   36 (125)
                      ||.++|.|.++-+|+.++..|+++|+.|.++. |+.
T Consensus       158 Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        158 GLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            89999999999999999999999999999994 654

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.03  E-value=0.24  Score=36.22  Aligned_cols=34  Identities=21%  Similarity=0.259  Sum_probs=30.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ||++.|.| .|.||+.+++.+...|++|++.+|..
T Consensus       145 gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        145 GKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCc
Confidence            78899998 68999999999999999999999864

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=94.02  E-value=0.11  Score=35.17  Aligned_cols=35  Identities=43%  Similarity=0.548  Sum_probs=27.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+++|  |.+-+|..+|..|++.|++|+.++.+++..
T Consensus         2 ~I~Vi--GlGyvGl~~A~~lA~~G~~V~g~D~~~~~v   36 (185)
T PF03721_consen    2 KIAVI--GLGYVGLPLAAALAEKGHQVIGVDIDEEKV   36 (185)
T ss_dssp             EEEEE----STTHHHHHHHHHHTTSEEEEE-S-HHHH
T ss_pred             EEEEE--CCCcchHHHHHHHHhCCCEEEEEeCChHHH
Confidence            66666  588999999999999999999999987654

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=94.02  E-value=0.12  Score=38.92  Aligned_cols=36  Identities=31%  Similarity=0.310  Sum_probs=30.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~   37 (125)
                      .+.+.|.|++|.+|..+.+.|.++ .+++..+.+..+
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~s   74 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRK   74 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhh
Confidence            467899999999999999999988 678888877543

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=93.99  E-value=0.18  Score=36.84  Aligned_cols=37  Identities=19%  Similarity=0.100  Sum_probs=30.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...+......|++|+++++++++.
T Consensus       166 g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~  202 (329)
T TIGR02822       166 GGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAAR  202 (329)
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHH
Confidence            678999997 8999887776666799999998887654

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.98  E-value=0.12  Score=39.54  Aligned_cols=36  Identities=25%  Similarity=0.300  Sum_probs=32.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |++++|.|. |.+|+.+++.|...|++|+++++++..
T Consensus       212 Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r  247 (425)
T PRK05476        212 GKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC  247 (425)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh
Confidence            789999996 689999999999999999999988754

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=93.97  E-value=0.73  Score=29.47  Aligned_cols=30  Identities=20%  Similarity=0.427  Sum_probs=24.1

Q ss_pred             EEEecCCcchHHHHHHHHHHcC--CeEEEeec
Q psy7029           5 IVVTGASVGIGAAILRALAAKG--HQVIGFAR   34 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g--~~v~~~~r   34 (125)
                      +.|.|+||.||.+...-+.+..  ++|+.+.-
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa   32 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSA   32 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEc
Confidence            4689999999999999888876  67766543

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.95  E-value=0.35  Score=34.86  Aligned_cols=37  Identities=27%  Similarity=0.341  Sum_probs=31.3

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhH
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDF   41 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   41 (125)
                      ++-|.| .|-+|..+|..|+..|+.|++.+++++..+.
T Consensus         7 ~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          7 RVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             EEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            455666 4789999999999999999999999887654

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=93.93  E-value=0.41  Score=34.00  Aligned_cols=34  Identities=21%  Similarity=0.408  Sum_probs=30.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      +.+++|.|+++++|..+++.+...|+.|+.+.++
T Consensus       145 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~  178 (326)
T cd08272         145 GQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS  178 (326)
T ss_pred             CCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech
Confidence            5789999999999999999888899999988876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1196|consensus

Probab=93.92  E-value=0.34  Score=35.46  Aligned_cols=37  Identities=27%  Similarity=0.399  Sum_probs=30.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH-cCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA-KGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~   39 (125)
                      |++++|.||++..|.-+ -+|++ .||.|+..+-+.++.
T Consensus       154 geTv~VSaAsGAvGql~-GQ~Ak~~Gc~VVGsaGS~EKv  191 (343)
T KOG1196|consen  154 GETVFVSAASGAVGQLV-GQFAKLMGCYVVGSAGSKEKV  191 (343)
T ss_pred             CCEEEEeeccchhHHHH-HHHHHhcCCEEEEecCChhhh
Confidence            68999999999999764 45665 599999988887754

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=93.92  E-value=0.69  Score=33.33  Aligned_cols=37  Identities=22%  Similarity=0.262  Sum_probs=29.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      +.+++|.| .+++|..+++.+...|++ ++++.++.+..
T Consensus       160 g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~  197 (334)
T cd08234         160 GDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKL  197 (334)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence            56788897 589999998888888987 78787775543

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	125
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		6e-05
3u9l_A	324	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-04
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		4e-04
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		5e-04
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		6e-04

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 57  GHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVE--AFDWINNKFGHIDVMIN 114
           G  VIG ARR E +D +    PD +  ++ +DVT D E ++  A D +  ++G +DV++N
Sbjct: 29  GDTVIGTARRTEALDDLVAAYPD-RAEAISLDVT-DGERIDVVAADVL-ARYGRVDVLVN 85
Query: 115 NAGVNE 120
           NAG  +
Sbjct: 86  NAGRTQ 91

>pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 50/121 (41%), Gaps = 24/121 (19%)
Query: 3   KIIVVTGASVXXXXXXXXXXXXKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KII++TGAS              GH+V                +A   DIV      V  
Sbjct: 6   KIILITGASSGFGRLTAEALAGAGHRV----------------YASXRDIVGRNASNV-- 47
Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                E I   A++N D  + +L++DV     V  A D I  + G IDV+I+NAG   F 
Sbjct: 48  -----EAIAGFARDN-DVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHXVFG 101
Query: 123 P 123
           P
Sbjct: 102 P 102

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 53  VAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKV--DVTKDAEVVEAFDWINNKFGHID 110
            A +G  ++  AR  E ++ +AK+  D    +L V  D+T DA+V    D     +G +D
Sbjct: 31  CAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVD 90
Query: 111 VMINNA 116
           V+INNA
Sbjct: 91  VVINNA 96

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 59  QVIGFARRAEMIDAMAK----ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMIN 114
           ++I  ARR E ++ + K    E P+ KVH  ++D+T+  ++    + +  +F  ID+++N
Sbjct: 62  KLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVN 121
Query: 115 NAG 117
           NAG
Sbjct: 122 NAG 124

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 63  FARRAE---MIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
           FAR A     +DA+A+  P  +   L V++  DA+  +A       FG +D ++NNAGVN
Sbjct: 37  FARHAPDGAFLDALAQRQP--RATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVN 94
Query: 120 E 120
           +
Sbjct: 95  D 95

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	125
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	4e-27
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	9e-23
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-22
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-22
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	8e-22
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-21
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-21
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-21
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	5e-21
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	4e-20
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-20
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	5e-20
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	5e-20
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-19
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-18
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-18
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-17
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-17
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-16
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-16
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-16
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-16
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	4e-16
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-16
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	4e-16
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	4e-16
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-16
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-16
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	6e-16
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	7e-16
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	7e-16
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-15
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-15
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-15
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-15
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-15
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-15
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-15
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-15
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	3e-15
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-15
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	4e-15
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-15
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-15
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-15
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	4e-15
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	5e-15
3rih_A	293	Short chain dehydrogenase or reductase; structural	5e-15
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	5e-15
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	5e-15
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	5e-15
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	6e-15
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	6e-15
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	6e-15
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	7e-15
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	7e-15
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	8e-15
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	8e-15
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	8e-15
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	9e-15
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	9e-15
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	9e-15
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-14
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-14
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-14
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-14
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-14
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-14
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	1e-14
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-14
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-14
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-14
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-14
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-14
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-14
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-14
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-14
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-14
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-14
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-14
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-14
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-14
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	3e-14
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-14
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	3e-14
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-14
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-14
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-14
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	4e-14
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	4e-14
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-14
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-14
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	4e-14
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	5e-14
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	5e-14
1xkq_A	280	Short-chain reductase family member (5D234); parra	5e-14
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	5e-14
1spx_A	278	Short-chain reductase family member (5L265); paral	5e-14
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	5e-14
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	6e-14
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-14
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	6e-14
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-14
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-14
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	7e-14
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	7e-14
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	8e-14
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	8e-14
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	9e-14
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	9e-14
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-13
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-13
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-13
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-13
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-13
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-13
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-13
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-13
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-13
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-13
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-13
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-13
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-13
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-13
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-13
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-13
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-13
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-13
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-13
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-13
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-13
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-13
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-13
1xq1_A	266	Putative tropinone reducatse; structural genomics,	3e-13
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	3e-13
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-13
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	3e-13
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-13
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	3e-13
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-13
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	4e-13
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-13
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-13
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	5e-13
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	6e-13
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	7e-13
1xhl_A	297	Short-chain dehydrogenase/reductase family member	8e-13
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	9e-13
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-12
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-12
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-12
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-12
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-12
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-12
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-12
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-12
4e4y_A	244	Short chain dehydrogenase family protein; structur	5e-12
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	6e-12
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	8e-12
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	8e-12
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-11
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-11
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-11
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	4e-11
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	5e-11
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	6e-11
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	8e-11
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	9e-11
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-10
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-10
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-10
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-10
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	2e-10
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	4e-10
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-09
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	3e-09
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-08
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-08
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	7e-08
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-07
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-06
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-06
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-06
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	3e-06
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	8e-06
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-05
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-05
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	4e-05
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	6e-05
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-04
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-04
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-04
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	4e-04
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	6e-04
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	6e-04
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	7e-04
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	7e-04
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	8e-04

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  100 bits (251), Expect = 4e-27
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 27/123 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTGAS GIGAA+ RAL  +G +V+G AR                            
Sbjct: 33  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVG------------------------- 67

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                E+            +   + D++ + +++  F  I ++   +D+ INNAG+    
Sbjct: 68  --NIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPD 125

Query: 123 PVT 125
            + 
Sbjct: 126 TLL 128

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 88.0 bits (219), Expect = 9e-23
 Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ V+TGAS GIG AI RALA  G+ +   AR  + +   E +     +++  +G     
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRL---EKIAH---ELMQEQGV---- 52

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             +V    +DV+K   V E    +  +FG +DV++ NAG+  F 
Sbjct: 53  ------------------EVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFK 94

Query: 123 PV 124
            +
Sbjct: 95  RL 96

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 87.6 bits (218), Expect = 2e-22
 Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 29/124 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M K+I++TGAS GIG  I R L   G +++  ARR   I   E++     +I  A G   
Sbjct: 3   MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI---EAIAT---EIRDAGG--- 53

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                                  +  +DVT    V        + +G IDV++NNAGV  
Sbjct: 54  --------------------TALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP 93

Query: 121 FAPV 124
            +P+
Sbjct: 94  LSPL 97

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 86.9 bits (216), Expect = 4e-22
 Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 32/119 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MS  + +TGA+ G G A  R                                 A  G  +
Sbjct: 20  MSSTLFITGATSGFGEACARRF-------------------------------AEAGWSL 48

Query: 61  IGFARRAEMIDAMAKE-NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +   RR E + A+A E +   +V  L +DV   A +  A D +  +F  +  +INNAG+
Sbjct: 49  VLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGL 107

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 86.6 bits (215), Expect = 8e-22
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 32/121 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             K +++TGAS GIG A         +                               ++
Sbjct: 32  AKKTVLITGASAGIGKATALEYLEASN----------------------------GDMKL 63

Query: 61  IGFARRAEMIDAMAKE----NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
           I  ARR E ++ + K      P+ KVH  ++D+T+  ++    + +  +F  ID+++NNA
Sbjct: 64  ILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNA 123

Query: 117 G 117
           G
Sbjct: 124 G 124

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 86.3 bits (214), Expect = 1e-21
 Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 24/124 (19%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             KII++TGAS G G     ALA  GH+V    R     +                    
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRN-------------------- 43

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
              A   E I   A++N    + +L++DV     V  A D I  + G IDV+I+NAG   
Sbjct: 44  ---ASNVEAIAGFARDNDV-DLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMV 99

Query: 121 FAPV 124
           F P 
Sbjct: 100 FGPA 103

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 84.5 bits (210), Expect = 2e-21
 Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 33/124 (26%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M   +++TGAS GIG A  R L                                AKG++V
Sbjct: 4   MKGAVLITGASRGIGEATARLL-------------------------------HAKGYRV 32

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
              AR  + + A+A E        L  DV ++ +   A   +   FG +  ++NNAGV  
Sbjct: 33  GLMARDEKRLQALAAELEG--ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV 90

Query: 121 FAPV 124
             PV
Sbjct: 91  MKPV 94

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 85.0 bits (211), Expect = 2e-21
 Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 35/124 (28%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M K++V+TGAS GIG AI R                                 + +GH +
Sbjct: 15  MKKLVVITGASSGIGEAIARRF-------------------------------SEEGHPL 43

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           +  ARR E + A+            +VDVT       A       +G  D ++NNAG+  
Sbjct: 44  LLLARRVERLKALNLP----NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMML 99

Query: 121 FAPV 124
              +
Sbjct: 100 LGQI 103

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 83.3 bits (207), Expect = 5e-21
 Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TGAS GIG A  RALAA+G  V   ARR E +    +L     ++ AA       
Sbjct: 8   KVALITGASSGIGEATARALAAEGAAVAIAARRVEKL---RALGD---ELTAAGA----- 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             KVH L++DV     V  A        G +D+++NNAG+    
Sbjct: 57  ------------------KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLG 98

Query: 123 PV 124
           PV
Sbjct: 99  PV 100

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 81.1 bits (201), Expect = 4e-20
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 26/122 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + ++TGAS GIGA I   LA  G++V+  AR  +     E +     +I+ +  H    
Sbjct: 8   GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQN---LEKVHD---EIMRSNKHVQ-- 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             +   L +D+T   +       I+ K+G +D+++N A +    
Sbjct: 60  ------------------EPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDG 101

Query: 123 PV 124
            +
Sbjct: 102 SL 103

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 81.2 bits (201), Expect = 5e-20
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 30/120 (25%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M K+I+VTG S GIG +I+  L +     +                             V
Sbjct: 1   MGKVILVTGVSRGIGKSIVDVLFSLDKDTV-----------------------------V 31

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
            G AR    +  + ++  D +   +  D+T+D+ + +  +      G ID ++ NAGV E
Sbjct: 32  YGVARSEAPLKKLKEKYGD-RFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLE 90

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 81.0 bits (201), Expect = 5e-20
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 32/115 (27%)

Query: 4   IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGF 63
           I++VTGA+ G G  I R                                   +GH+VI  
Sbjct: 2   IVLVTGATAGFGECITRRF-------------------------------IQQGHKVIAT 30

Query: 64  ARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            RR E +  +  E  D  ++  ++DV   A + E    +  ++ +ID+++NNAG+
Sbjct: 31  GRRQERLQELKDELGD-NLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGL 84

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 80.7 bits (200), Expect = 5e-20
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 26/126 (20%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M  I+++TGA  GIG AI    A                                    +
Sbjct: 1   MKHILLITGAGKGIGRAIALEFARAARHH------------------------PDFEPVL 36

Query: 61  IGFARRAEMIDAMAKE--NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +  +R A  ++ ++ E         ++  D++  A+V      I  ++GHID ++NNAGV
Sbjct: 37  VLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGV 96

Query: 119 NEFAPV 124
             F  +
Sbjct: 97  GRFGAL 102

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 78.8 bits (195), Expect = 3e-19
 Identities = 30/122 (24%), Positives = 44/122 (36%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
             I+VTGA  G+G A+   L  +GHQV    RR + +                 G+ VIG
Sbjct: 4   GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQ----------QQELLLGNAVIG 53

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    D+    +V  AF       G  +++++ AG  EF 
Sbjct: 54  IV----------------------ADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFG 91

Query: 123 PV 124
           PV
Sbjct: 92  PV 93

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 77.7 bits (192), Expect = 1e-18
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 32/123 (26%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           +K+ +VTGAS G G AI  A  A G  VIG ARR E +D          D+VAA   +  
Sbjct: 5   AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD----------DLVAAYPDR-- 52

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                 ++ +DVT    +      +  ++G +DV++NNAG  + 
Sbjct: 53  --------------------AEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQV 92

Query: 122 APV 124
              
Sbjct: 93  GAF 95

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 76.4 bits (189), Expect = 2e-18
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 36/122 (29%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KI VVTGA+ G+G  I++ L+                                  H V  
Sbjct: 6   KIAVVTGATGGMGIEIVKDLSR--------------------------------DHIVYA 33

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             R  E + A+A+      V  ++ D+ K+       D +     H+D +++ A V    
Sbjct: 34  LGRNPEHLAALAEIE---GVEPIESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDT 89

Query: 123 PV 124
            +
Sbjct: 90  TI 91

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 74.6 bits (184), Expect = 2e-17
 Identities = 20/117 (17%), Positives = 34/117 (29%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++   A  GIG    R L  +  +      R E                         
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE------------------------- 40

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEA-FDWINNKFGHIDVMINNAGV 118
                  +  +   NP   +     DVT      +     I ++   +D++IN AG+
Sbjct: 41  ---NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI 94

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 74.5 bits (184), Expect = 2e-17
 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ VVTGAS GIGAAI R L + G +V+  AR  E      ++       + A G +   
Sbjct: 30  QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK---LRAV----EREIVAAGGEAES 82

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A                       D++    +      +    G  DV++NNAGV
Sbjct: 83  HA----------------------CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV 116

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 72.7 bits (179), Expect = 1e-16
 Identities = 23/122 (18%), Positives = 37/122 (30%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++VTGAS GIG  +   LA  G  V+  AR  E                         
Sbjct: 29  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKE------------------------- 63

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                + + +   E      H +   +       +         G +D++I N   N   
Sbjct: 64  ---TLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL 120

Query: 123 PV 124
            +
Sbjct: 121 NL 122

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 71.9 bits (177), Expect = 2e-16
 Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +   VTG S GIG A+ R LAA+G  V G AR A+      +     VD + A GH V G
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKN---VSAA----VDGLRAAGHDVDG 77

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            +                       DVT   EV  A      +FG I +++N+AG N   
Sbjct: 78  SS----------------------CDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGG 115

Query: 123 PV 124
             
Sbjct: 116 ET 117

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 71.8 bits (177), Expect = 2e-16
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA  GIG  I + LA     VI  +R  +     +S+    VD + + G++  G
Sbjct: 45  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKS---CDSV----VDEIKSFGYESSG 97

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +                        DV+K  E+ E  + I  +  ++D+++NNAG+
Sbjct: 98  Y----------------------AGDVSKKEEISEVINKILTEHKNVDILVNNAGI 131

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 71.1 bits (175), Expect = 3e-16
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTGA+ GIG  I R L  +G +V   AR  E      +     +  +   G +  G
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEG---LRTT----LKELREAGVEADG 75

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                    DV    E+      +  ++G +DV++NNAG  
Sbjct: 76  R----------------------TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRP 110

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 71.0 bits (175), Expect = 4e-16
 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TGAS GIG  +  A A  G QV   AR ++ +           D +A  G     
Sbjct: 33  KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVV-------ADEIAGVGG---- 81

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             K   ++ DVT+  +V    D +  + G ID+ + NAG+    
Sbjct: 82  ------------------KALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQ 123

Query: 123 P 123
            
Sbjct: 124 A 124

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 70.3 bits (173), Expect = 4e-16
 Identities = 20/122 (16%), Positives = 39/122 (31%), Gaps = 35/122 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            +IV+TGAS G+GA + +   A+G                         +          
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATY---------------------LTG-------- 32

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             R    +  +     +  V     D+    EV + F+ +         ++++AG   F 
Sbjct: 33  --RSESKLSTVTNCLSN-NVGYRARDLASHQEVEQLFEQL---DSIPSTVVHSAGSGYFG 86

Query: 123 PV 124
            +
Sbjct: 87  LL 88

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 71.1 bits (175), Expect = 4e-16
 Identities = 28/117 (23%), Positives = 39/117 (33%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  VTG+S GIG A+  A A  G  V  +       + AE        +    G     
Sbjct: 35  KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAE-------HLQKTYGV---- 83

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                + K +++    V E        FG IDV + NAGV 
Sbjct: 84  ------------------HSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVT 122

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 70.6 bits (174), Expect = 4e-16
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG++ GIG AI   LA+ G  VI      E                         
Sbjct: 8   KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGE------------------------- 42

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              RA+ +          K H +++++  +  + +AF+ I N    ID+++NNAG+
Sbjct: 43  ---RAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGI 95

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 70.2 bits (173), Expect = 5e-16
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG  +  ALA+KG  V+G A        AE       + +  KG +  G
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVVGTATSQAS---AEKF----ENSMKEKGFKARG 58

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                   ++++    +   F  I  +   ID+++NNAG+
Sbjct: 59  L----------------------VLNISDIESIQNFFAEIKAENLAIDILVNNAGI 92

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 71.1 bits (174), Expect = 5e-16
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  VVTG + GIG  I + L++ G  V+   R                            
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVT------------------------- 47

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGV 118
              +        K +    V   ++DVT     + +  D+I   FG +D+++NNAGV
Sbjct: 48  ---KGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGV 101

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 70.3 bits (173), Expect = 6e-16
 Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTGAS GIG AI   LA +G  VIG A        AE +           G +  G
Sbjct: 29  QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAG---AEGI----GAAFKQAGLEGRG 81

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                   ++V     V    +    +FG ++V++NNAG+
Sbjct: 82  A----------------------VLNVNDATAVDALVESTLKEFGALNVLVNNAGI 115

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 70.3 bits (173), Expect = 7e-16
 Identities = 26/122 (21%), Positives = 39/122 (31%), Gaps = 27/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + VVTG S GIG A +  L   G  V   AR  E                         
Sbjct: 9   AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGE------------------------- 43

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             R      A+ +  P  ++ +   DV    +V    +      G   +++NNAG    +
Sbjct: 44  --RLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVS 101

Query: 123 PV 124
             
Sbjct: 102 TF 103

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 70.0 bits (172), Expect = 7e-16
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 30/124 (24%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           +  + V GA   IGA I +  AA+G  V    R  E       L    V  + A G +++
Sbjct: 7   NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEK---LAPL----VAEIEAAGGRIV 59

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
             +                      +D   + EV    +   +    ++V I N G N  
Sbjct: 60  ARS----------------------LDARNEDEVTAFLNAA-DAHAPLEVTIFNVGANVN 96

Query: 122 APVT 125
            P+ 
Sbjct: 97  FPIL 100

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 70.0 bits (172), Expect = 1e-15
 Identities = 32/117 (27%), Positives = 42/117 (35%), Gaps = 32/117 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KI +VTGA  G+G A+  ALA  G+ V    RR + +           +  A  G   + 
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQ----------ETAAEIGDDALC 78

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                    DVT    V   F     KFG +DV+ NNAG  
Sbjct: 79  VP----------------------TDVTDPDSVRALFTATVEKFGRVDVLFNNAGTG 113

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 70.0 bits (172), Expect = 1e-15
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 28/117 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +I +VTG   G+G  I +AL+A+G+ V+   RR +++D      A   +I    G+ V  
Sbjct: 34  RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLD------AAAGEIGGRTGNIVRA 87

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                    DV    +V   F  +  +F  +D+++NNAG N
Sbjct: 88  VV----------------------CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN 122

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 34/124 (27%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M K+ +VTGA  GIG AI   L   G  V                     D   A    V
Sbjct: 1   MKKVALVTGAGQGIGKAIALRLVKDGFAVA------------------IADYNDATAKAV 42

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                 A  I+            ++KVDV+   +V  A +      G  DV++NNAGV  
Sbjct: 43  ------ASEINQAGG-----HAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP 91

Query: 121 FAPV 124
             P+
Sbjct: 92  STPI 95

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 69.6 bits (171), Expect = 2e-15
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 24/122 (19%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTG + GIG AI++ L   G  V+  +R+ E +  A                    
Sbjct: 19  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSA-------------------- 58

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A+ + A        +V  ++ ++  + EV        + FG I+ ++NN G    +
Sbjct: 59  ----ADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS 114

Query: 123 PV 124
           P 
Sbjct: 115 PA 116

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 69.0 bits (170), Expect = 2e-15
 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 29/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTG++ G+G A    LAA G +VI    RA ++  +       VD +  KG+    
Sbjct: 10  KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAES-------VDTLTRKGY---- 58

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                               H +  DVT +  +  AF  ++ +  H+D++INNAG+    
Sbjct: 59  ------------------DAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRK 100

Query: 123 P 123
           P
Sbjct: 101 P 101

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTG+S G+G AI   L   G  ++     A      ++      +   A G  V+ 
Sbjct: 6   KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAS--TSLDAT----AEEFKAAGINVVV 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                  K DV    +V        + FG ID+++NNAG+
Sbjct: 60  A----------------------KGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI 93

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TG ++GIG AI      +G +V+                       +  G +   
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVM------------------ITGRHSDVGEKA-- 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A+ +    +      +   + D + +    + FD     FG +  ++NNAG+    
Sbjct: 47  ----AKSVGTPDQ------IQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK 96

Query: 123 PVT 125
            V 
Sbjct: 97  SVE 99

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KI V+TGA+ GIG A  +   A+G +V    RR +++D A          +A  G   +G
Sbjct: 30  KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA----------IAEIGGGAVG 79

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                 ++ D    AE+   ++ +  + G IDV+  NAG     
Sbjct: 80  ----------------------IQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSML 117

Query: 123 PV 124
           P+
Sbjct: 118 PL 119

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 68.4 bits (168), Expect = 4e-15
 Identities = 31/117 (26%), Positives = 43/117 (36%), Gaps = 28/117 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K I+VTG + GIG A  RA+AA G  V    R A   D  E        +    G +   
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAA--DAVEVT----EKVGKEFGVKTKA 68

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
           +                      + DV+    V +    I+   G I  +I NAGV+
Sbjct: 69  Y----------------------QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVS 103

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 68.3 bits (168), Expect = 4e-15
 Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTG +  IG A + ALA  G +VI       M   A       V+ +  +GH V  
Sbjct: 14  RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKA-------VEDLRMEGHDVSS 66

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                   +DVT    V  A   ++ + G +D+++  AG+ 
Sbjct: 67  V----------------------VMDVTNTESVQNAVRSVHEQEGRVDILVACAGIC 101

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K  +VTG+S G+G A    LA  G+ + I +AR  +    A        + +   G +V+
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKA---ALET----AEEIEKLGVKVL 57

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                   K +V + A++ E F  I+  FG +DV +NNA     
Sbjct: 58  VV----------------------KANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVL 95

Query: 122 APV 124
            PV
Sbjct: 96  RPV 98

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 31/116 (26%), Positives = 41/116 (35%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTGA+ GIG AI   LAA G  VI     AE                A+ G +   
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAK----------AAAASIGKKARA 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A                       D++    V   F  I    G ID+++NNA +
Sbjct: 57  IA----------------------ADISDPGSVKALFAEIQALTGGIDILVNNASI 90

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TGA+ GIGA I RA AA G +++   R    +D A         +    G     
Sbjct: 21  KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAAR------RALGEQFGT---- 70

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                              VH++ +D+ +     E        FG +DV++NNAG++   
Sbjct: 71  ------------------DVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQ 112

Query: 123 PV 124
           PV
Sbjct: 113 PV 114

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 68.4 bits (168), Expect = 4e-15
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 28/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  +TG   G+G  +   L++ G Q +  +R+ +++            I +  G++V  
Sbjct: 27  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE------QISSQTGNKVHA 80

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    DV     V      +    GH +++INNA  N  +
Sbjct: 81  IQ----------------------CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFIS 118

Query: 123 P 123
           P
Sbjct: 119 P 119

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 68.0 bits (167), Expect = 5e-15
 Identities = 26/116 (22%), Positives = 37/116 (31%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++  VTG   G+GAAI R L   G  V          D   +     +      G     
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN--DHVSTW----LMHERDAGRDFKA 79

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +                       VDV          + +   FG +DV+INNAG+
Sbjct: 80  Y----------------------AVDVADFESCERCAEKVLADFGKVDVLINNAGI 113

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 68.4 bits (168), Expect = 5e-15
 Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           + ++VTG + GIG  I    A  G  V   AR                            
Sbjct: 42  RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR------------------------- 76

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                  + A   E     V  +++DV+      +A   + + FG +DV+  NAG+
Sbjct: 77  ---ELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI 129

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 67.5 bits (166), Expect = 5e-15
 Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG AI   LA +G +VIG A                  I    G    G
Sbjct: 10  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQ----------AISDYLGDNGKG 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                   ++VT    +      I ++FG +D+++NNAG+
Sbjct: 60  M----------------------ALNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 68.2 bits (167), Expect = 5e-15
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 30/118 (25%)

Query: 2   SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             + +VTG + GIG AI+R L       V+  AR                     +G   
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT------------------RGQAA 45

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +           +  E    + H L  D+     +    D++  ++G +DV++NNAG+
Sbjct: 46  V---------QQLQAEGLSPRFHQL--DIDDLQSIRALRDFLRKEYGGLDVLVNNAGI 92

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 68.0 bits (167), Expect = 5e-15
 Identities = 25/116 (21%), Positives = 43/116 (37%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  +VTGA+ GIG AI R   A+G  V     R + +           +I A  G  V  
Sbjct: 28  RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLK----------EIAADLGKDVFV 77

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           F                        +++    + +  +    +   ID+++NNAG+
Sbjct: 78  F----------------------SANLSDRKSIKQLAEVAEREMEGIDILVNNAGI 111

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 67.5 bits (166), Expect = 6e-15
 Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 30/118 (25%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           S ++VVTGAS GIG AI  +L   G +V + +AR A+    AE +       + A G Q 
Sbjct: 1   SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKA---AEEV----SKQIEAYGGQA 53

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           I F                        DV+K+A+V        + +G IDV++NNAG+
Sbjct: 54  ITF----------------------GGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGI 89

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 67.5 bits (166), Expect = 6e-15
 Identities = 26/116 (22%), Positives = 38/116 (32%), Gaps = 26/116 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +II+VTGAS GIG       A  G  VI   R  E       + +    I    G Q   
Sbjct: 13  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEK---LRQVAS---HINEETGRQPQW 66

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           F                     L +         +    I   +  +D +++NAG+
Sbjct: 67  FI--------------------LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGL 102

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 68.2 bits (167), Expect = 6e-15
 Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 35/127 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            ++++TG S GIG  +   LA+                              ++  +V  
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASD----------------------------PSQSFKVYA 34

Query: 63  FARRAEMIDAMAKE-----NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
             R  +    + +       P   + +L++DV     V  A + +    G +DV++ NAG
Sbjct: 35  TLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV--TEGRVDVLVCNAG 92

Query: 118 VNEFAPV 124
           +    P+
Sbjct: 93  LGLLGPL 99

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 67.5 bits (166), Expect = 7e-15
 Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTG S G+G  I + LA  G  V+  +R  E    A         +    G     
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA------QKLTEKYGV---- 71

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             +  + + DV+   EV +  + +  KFG +D ++N AG+N   
Sbjct: 72  ------------------ETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH 113

Query: 123 P 123
           P
Sbjct: 114 P 114

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 67.6 bits (166), Expect = 7e-15
 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 27/117 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA+ GIG A   AL  KG +V                    VD     G Q   
Sbjct: 8   KVALVTGAAQGIGRAFAEALLLKGAKVA------------------LVDWNLEAGVQCK- 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                    A+ ++    K   ++ DV    ++ + F  + + FG +D+++NNAGVN
Sbjct: 49  --------AALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN 97

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 67.6 bits (166), Expect = 8e-15
 Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 30/122 (24%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           + +++VTG S GIGAA+ R  A +G +V + +A   E    A+++    V  +   G + 
Sbjct: 26  TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREA---ADAV----VAAITESGGEA 78

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           +                          DV   A++   F  ++ +FG +D ++NNAG+ +
Sbjct: 79  VAI----------------------PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVD 116

Query: 121 FA 122
           + 
Sbjct: 117 YP 118

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 28/115 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  ++T  + G+G  +   L AKG+ V             E++     +       ++  
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT--TAMETM----KETYKDVEERLQF 61

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                                  + DVTK  ++ +  +   + FG ID +INNAG
Sbjct: 62  V----------------------QADVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 67.8 bits (166), Expect = 8e-15
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 27/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +   VTG + G+G  ++R L  +G +V     R +                         
Sbjct: 9   RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQD------------------------- 43

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                + +  +  E    +V  +++DV        A D +  +FG + ++ NNAGVN F 
Sbjct: 44  --SIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQ 101

Query: 123 PV 124
           P+
Sbjct: 102 PI 103

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 67.1 bits (165), Expect = 9e-15
 Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K++V+TG+S G+G ++    A +  +V + +  + +    A S+    ++ +   G + I
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDE---ANSV----LEEIKKVGGEAI 60

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                   K DVT +++V+        +FG +DVMINNAG+   
Sbjct: 61  AV----------------------KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENP 98

Query: 122 APV 124
              
Sbjct: 99  VSS 101

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 67.2 bits (165), Expect = 9e-15
 Identities = 25/116 (21%), Positives = 40/116 (34%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +I  VTG   GIG +I + L   G +V+                   ++   A G     
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS--PRRVKW----LEDQKALGFDFYA 67

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                  + +V       +AFD +  + G IDV++NNAG+
Sbjct: 68  S----------------------EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 67.2 bits (165), Expect = 9e-15
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ V+TG+S GIG AI    A +G  ++  AR+ + +  A         +    G +V+ 
Sbjct: 8   KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAAR------SLKEKFGVRVLE 61

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            A                      VDV     V    + + + FG  D+++NNAG     
Sbjct: 62  VA----------------------VDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE 99

Query: 123 PV 124
            +
Sbjct: 100 TI 101

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 67.3 bits (165), Expect = 1e-14
 Identities = 26/122 (21%), Positives = 40/122 (32%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  +TG   GIG  I       G   +  +R    +  A         +  A G + + 
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAA------RKLAGATGRRCLP 81

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            +                      +DV     V+ A D    +FG ID++IN A  N   
Sbjct: 82  LS----------------------MDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLC 119

Query: 123 PV 124
           P 
Sbjct: 120 PA 121

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 66.7 bits (164), Expect = 1e-14
 Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VT ++ GIG AI R LA  G  V+  +R+ E +D         V  +  +G  V G
Sbjct: 15  KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRT-------VATLQGEGLSVTG 67

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                     V K  +         N  G +D++++NA VN
Sbjct: 68  TV----------------------CHVGKAEDRERLVAMAVNLHGGVDILVSNAAVN 102

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 66.7 bits (164), Expect = 1e-14
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 32/118 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTGAS GIG +I   LA +G+ V                               + 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNV------------------------------AVN 34

Query: 63  FARRAEMIDAMAKENPDW--KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +A   E  +A+ +E         +++ +V    EV      + ++FG +DV++NNAG+
Sbjct: 35  YAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 27/124 (21%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MSK+ +VTG + GIG  I   LAA G  +   A   +  + A       + ++ A   + 
Sbjct: 1   MSKVAMVTGGAQGIGRGISEKLAADGFDIA-VADLPQQEEQAAET----IKLIEAADQKA 55

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           +                         +DVT  A    A D    K G  DV++NNAG+ +
Sbjct: 56  VFV----------------------GLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ 93

Query: 121 FAPV 124
             P+
Sbjct: 94  IKPL 97

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K I+VTGA+ GIG A L   A +G  ++   R   ++           + VAA   + I 
Sbjct: 7   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLL----------AEAVAALEAEAIA 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                    DV+    V   F     +FG +  + + AGV
Sbjct: 57  V----------------------VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGV 90

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 66.7 bits (164), Expect = 1e-14
 Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 32/118 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGAS GIG AI   LA +G  V                              V+ 
Sbjct: 5   KVALVTGASRGIGRAIAIDLAKQGANV------------------------------VVN 34

Query: 63  FARRAEMIDAMAKENPDW--KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +A   +  + +  E         +++ DV    +V        + FG +D+++NNAGV
Sbjct: 35  YAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGV 92

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 67.0 bits (164), Expect = 1e-14
 Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 12/123 (9%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            + +VTGA+  +G +I   L A+G+ V + + R A     A +L A    + A + +  I
Sbjct: 10  PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE---ANALSA---TLNARRPNSAI 63

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                    D                 VT      E        +G  DV++NNA     
Sbjct: 64  TVQ-----ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP 118

Query: 122 APV 124
            P+
Sbjct: 119 TPL 121

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 39/123 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG S GIG A++ AL   G +V+                   V +       V  
Sbjct: 15  KVAIVTGGSSGIGLAVVDALVRYGAKVV------------------SVSLDEKSDVNVSD 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                  K+DVT + EV EA +    K+G ID+++NNAG+ +++
Sbjct: 57  H---------------------FKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS 95

Query: 123 PVT 125
           P+ 
Sbjct: 96  PLH 98

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG+  GIG A   ALA +G  V+     AE    AE++       + A G   I 
Sbjct: 10  KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEA---AEAV----AKQIVADGGTAIS 62

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                   VDV+         D    +FG ID ++NNA +
Sbjct: 63  V----------------------AVDVSDPESAKAMADRTLAEFGGIDYLVNNAAI 96

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 30/124 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              +VTG S GIG AI+  LA  G +V   +R  + +D         ++I   KG  V G
Sbjct: 22  TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC-------LEIWREKGLNVEG 74

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEF 121
                                    D+    E  +    + + F G +++++NNAGV   
Sbjct: 75  SV----------------------CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH 112

Query: 122 APVT 125
               
Sbjct: 113 KEAK 116

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 29/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++++TG S G+G  +    A +G +V+   R  E ++ A          +     Q++ 
Sbjct: 7   KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEA-------KLEIEQFPGQILT 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                  ++DV    ++ +  + I+ KFG ID++INNA  N   
Sbjct: 60  V----------------------QMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFIC 97

Query: 123 P 123
           P
Sbjct: 98  P 98

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 32/123 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TG + G+GA   R   A G +V+                    D++  +G     
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVV------------------LADVLDEEGAAT-- 45

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                      A+E  D       +DVT + +      +   +FG +D ++NNAG++   
Sbjct: 46  -----------ARELGD-AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM 93

Query: 123 PVT 125
            + 
Sbjct: 94  FLE 96

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 67.1 bits (164), Expect = 2e-14
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 12/123 (9%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
            + +VTGA+  +G +I   L A+G+ V + + R A     A +L A    + A + +  I
Sbjct: 47  PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAE---ANALSA---TLNARRPNSAI 100

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
               +A++ +                 VT      E        +G  DV++NNA     
Sbjct: 101 TV--QADLSNV---ATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP 155

Query: 122 APV 124
            P+
Sbjct: 156 TPL 158

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + +VTGA+ GIG AI    A  G  V+    ++E    AE++       +   G + IG
Sbjct: 13  AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEG---AEAV----AAAIRQAGGKAIG 65

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                    +VT +           ++FG I V++NNAG  
Sbjct: 66  LE----------------------CNVTDEQHREAVIKAALDQFGKITVLVNNAGGG 100

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 32/123 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTG   GIG A     A  G  V+                    D+      +V  
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVV------------------VADVNEDAAVRV-- 67

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A  I +        K   ++VDV+   +     +    K+G +DV++NNAG     
Sbjct: 68  ----ANEIGS--------KAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTG 115

Query: 123 PVT 125
            V 
Sbjct: 116 NVV 118

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 66.1 bits (162), Expect = 2e-14
 Identities = 31/116 (26%), Positives = 41/116 (35%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           + +VVTG + GIG  I    A  G  V    R    ID      A   D+      +VIG
Sbjct: 11  RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADID------ACVADLDQLGSGKVIG 64

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                  + DV+  A+          +FG IDV+  NAGV
Sbjct: 65  V----------------------QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV 98

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 32/123 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +V+G + G+GA+ +RA+ A+G +V+                  F DI+  +G  +  
Sbjct: 8   KVALVSGGARGMGASHVRAMVAEGAKVV------------------FGDILDEEGKAM-- 47

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A  +   A          + +DVT+ A+   A D     FG + V++NNAG+    
Sbjct: 48  ----AAELADAA--------RYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG 95

Query: 123 PVT 125
            + 
Sbjct: 96  TIE 98

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 26/122 (21%), Positives = 39/122 (31%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +V G + G+G A +R L   G +V+   R    I                 G +V  
Sbjct: 9   KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARI----------REEFGPRVHA 58

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                 L+ D+    E+           G ID++  NAGV+E  
Sbjct: 59  ----------------------LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELE 96

Query: 123 PV 124
           P 
Sbjct: 97  PF 98

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 32/123 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG + G+G  +++ L  +G +V                   F DI  A G Q+  
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVA------------------FSDINEAAGQQL-- 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                      A E  + +   ++ DV+ +A+       +  + G ++V++NNAG+    
Sbjct: 47  -----------AAELGE-RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPG 94

Query: 123 PVT 125
            + 
Sbjct: 95  DME 97

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 66.0 bits (162), Expect = 3e-14
 Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 32/123 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA  GIG A+ R LA +G  V+                    DI          
Sbjct: 30  KVAIVTGAGAGIGLAVARRLADEGCHVL------------------CADIDGDAADAA-- 69

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A  I   A         + +VDV+ + +++   D     FG +D ++ NAGV   A
Sbjct: 70  ----ATKIGCGA--------AACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLA 117

Query: 123 PVT 125
            + 
Sbjct: 118 SLI 120

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 32/118 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +I +VTGAS GIG AI   LAA G +V                               + 
Sbjct: 29  RIALVTGASRGIGRAIALELAAAGAKV------------------------------AVN 58

Query: 63  FARRAEMIDAMAKENPDW--KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +A  A   D +         +  ++K DV++++EV   F  +  ++G +DV++NNAG+
Sbjct: 59  YASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGI 116

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 40/123 (32%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+++VTGAS+GIG AI      +G +VI                   + I      +   
Sbjct: 9   KVVIVTGASMGIGRAIAERFVDEGSKVI------------------DLSIHDPGEAKYDH 50

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                  + DVT   +V  + D I  ++G I V++NNAG+  + 
Sbjct: 51  I----------------------ECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYG 88

Query: 123 PVT 125
            + 
Sbjct: 89  KIE 91

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 31/122 (25%), Positives = 43/122 (35%), Gaps = 22/122 (18%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K + +TGAS GIG AI    A  G  V   A+ A                V A G Q + 
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLA 66

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                 LK D+ ++ +V  A     + FG ID+++NNA      
Sbjct: 67  ----------------------LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLR 104

Query: 123 PV 124
             
Sbjct: 105 GT 106

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           +  ++TGAS GIG AI   LA  G  + I + +  E                        
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNRE------------------------ 37

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
               +AE +   A+      V  L  ++ +               G +D ++NNAG+
Sbjct: 38  ----KAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGI 90

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 65.8 bits (161), Expect = 4e-14
 Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 27/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  V+TG++ GIG AI R LA  G  ++     A   D   ++     ++       V+ 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAP--DEIRTVTD---EVAGLSSGTVLH 80

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    D+TK +E+ +    + ++FG  D+++NNAGV    
Sbjct: 81  H----------------------PADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVE 118

Query: 123 PV 124
            +
Sbjct: 119 KI 120

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 65.7 bits (161), Expect = 4e-14
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + +VTG   GIG  I RALAA G  +          +    +    +  ++  G +VI 
Sbjct: 30  PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDA--EGVAPV----IAELSGLGARVIF 83

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                  + D+   +      D +  +FG ID ++NNAG+
Sbjct: 84  L----------------------RADLADLSSHQATVDAVVAEFGRIDCLVNNAGI 117

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TG++ GIG A   A   +G  V                     DI   +  Q   
Sbjct: 9   KSALITGSARGIGRAFAEAYVREGATVA------------------IADIDIERARQA-- 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A  I            +++++DVT+   +  A        G +D+++NNA + + A
Sbjct: 49  ----AAEIGP--------AAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLA 96

Query: 123 PV 124
           P+
Sbjct: 97  PI 98

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 65.3 bits (160), Expect = 4e-14
 Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +I+++TGA  GIG       A    +++ +                             G
Sbjct: 32  EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKH------------------------G 67

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A     +       KVH+  VD +   ++  +   +  + G + +++NNAGV   +
Sbjct: 68  LEETAAKCKGLGA-----KVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 122

Query: 123 PV 124
            +
Sbjct: 123 DL 124

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 65.3 bits (160), Expect = 4e-14
 Identities = 27/116 (23%), Positives = 39/116 (33%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA   IG A    LA +G  +                    +D+      +   
Sbjct: 8   KVCLVTGAGGNIGLATALRLAEEGTAIA------------------LLDMNREALEKA-- 47

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                  +     E       S   DVT +  V+   D +   FG ID + NNAG 
Sbjct: 48  ----EASVREKGVE-----ARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY 94

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 28/121 (23%), Positives = 39/121 (32%), Gaps = 32/121 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
               VTGA  GIG  I RA AA G      AR                         +I 
Sbjct: 12  ACAAVTGAGSGIGLEICRAFAASG------AR-------------------------LIL 40

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             R A  +D  A+E        +  DVT    +  A          + +++N+AG+    
Sbjct: 41  IDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEA-EAVAPVSILVNSAGIARLH 99

Query: 123 P 123
            
Sbjct: 100 D 100

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 65.2 bits (160), Expect = 5e-14
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 30/124 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              +VTG S GIG  I+  LA+ G  V   +R  + ++         +    +KG +V  
Sbjct: 10  CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDC-------LTQWRSKGFKVEA 62

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEF 121
                                    D++  +E  E  + + N F G +++++NNAG+  +
Sbjct: 63  SV----------------------CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY 100

Query: 122 APVT 125
               
Sbjct: 101 KEAK 104

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 65.2 bits (160), Expect = 5e-14
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 29/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TGA  GIG  I    A  G  V+                    DI A   + V  
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVV------------------VSDINADAANHV-- 51

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                + I  +       +  + + D+T + E+    D+  +K G +D+++NNAG     
Sbjct: 52  ----VDEIQQLGG-----QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPK 102

Query: 123 P 123
           P
Sbjct: 103 P 103

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 65.3 bits (160), Expect = 5e-14
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 26/122 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TG+S GIG       A +G  V                        + +  +   
Sbjct: 7   KTVIITGSSNGIGRTTAILFAQEGANVT------------------ITGRSSERLEET-- 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                ++I        + +V+S+  DVT +    +  +    +FG IDV++NNAG     
Sbjct: 47  ----RQIILKSGV--SEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPD 100

Query: 123 PV 124
             
Sbjct: 101 AF 102

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 65.4 bits (160), Expect = 5e-14
 Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 22/122 (18%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K + ++G S GIG AI + +AA G  V   A+ AE               +   G Q + 
Sbjct: 10  KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALP 69

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                 +  D+     V  A      +FG ID+ +NNA      
Sbjct: 70  ----------------------IVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLG 107

Query: 123 PV 124
            +
Sbjct: 108 SI 109

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 65.3 bits (160), Expect = 5e-14
 Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 26/122 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TG+S GIG A     A +G +V                        A +  +   
Sbjct: 7   KVAIITGSSNGIGRATAVLFAREGAKVT------------------ITGRHAERLEET-- 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                + I A         V+S+  DVT DA   E       KFG +D+++NNAG     
Sbjct: 47  ----RQQILAAGVSEQ--NVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPD 100

Query: 123 PV 124
             
Sbjct: 101 SQ 102

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 64.8 bits (159), Expect = 5e-14
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 28/125 (22%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MS++ +VTGAS G G AI     A+G +V                    +D+ A    + 
Sbjct: 1   MSRVAIVTGASSGNGLAIATRFLARGDRVA------------------ALDLSAETLEET 42

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                 A     +           ++ DV  + +V  A      +FG IDV++NNAG+  
Sbjct: 43  ARTHWHAYADKVLR----------VRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITG 92

Query: 121 FAPVT 125
            +   
Sbjct: 93  NSEAG 97

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 64.9 bits (159), Expect = 6e-14
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 26/122 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+IV+ G    +GA   +  A +   ++    +A+  D A  L     D +  +G +V  
Sbjct: 12  KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKL----KDELEDQGAKVAL 67

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
           +                      + D++ + EV + FD+   +FG +D+ IN  G     
Sbjct: 68  Y----------------------QSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKK 105

Query: 123 PV 124
           P+
Sbjct: 106 PI 107

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 65.6 bits (160), Expect = 6e-14
 Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 22/122 (18%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
             + +TGAS GIG AI    A  G  ++  A+ A+             + + A G + + 
Sbjct: 46  CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALP 105

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                   VDV  + ++  A +    KFG ID+++NNA      
Sbjct: 106 ----------------------CIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLT 143

Query: 123 PV 124
             
Sbjct: 144 NT 145

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 64.9 bits (159), Expect = 6e-14
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 26/117 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++I+VTGA+ GIGAA  RA AA G  V+   R          +      I +A   Q + 
Sbjct: 15  RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEAS---LAEVSD---QIKSAGQPQPLI 68

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
            A                    L ++     +  E    + ++FG +D +++NA + 
Sbjct: 69  IA--------------------LNLENATAQQYRELAARVEHEFGRLDGLLHNASII 105

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 64.7 bits (158), Expect = 6e-14
 Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 33/122 (27%)

Query: 1   MS-KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQ 59
           MS   +VVTGA+ GIG  +++ L    +                                
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIR-----------------------------H 31

Query: 60  VIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFG--HIDVMINNAG 117
           +I  AR  E    +       +VH L + VT D  +      +    G   + ++INNAG
Sbjct: 32  IIATARDVEKATELKSIKDS-RVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAG 90

Query: 118 VN 119
           V 
Sbjct: 91  VL 92

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 64.9 bits (159), Expect = 7e-14
 Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K+ +VTGAS GIGAAI   LA+ G  V I +A +A     AE +       + A G + +
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAA---AEEV----AGKIEAAGGKAL 80

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                   + DV+  A V   F      FG +DV++NNAG+   
Sbjct: 81  TA----------------------QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPL 118

Query: 122 APV 124
             +
Sbjct: 119 TTI 121

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 64.9 bits (159), Expect = 7e-14
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + ++TGA  GIG A   ALAA G  V    R        E +     D +   G Q I 
Sbjct: 29  PVALITGAGSGIGRATALALAADGVTVGALGRTRTE---VEEV----ADEIVGAGGQAIA 81

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                  + DV+ + ++  A   +  KFGH+D+++ NAG+N
Sbjct: 82  L----------------------EADVSDELQMRNAVRDLVLKFGHLDIVVANAGIN 116

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 64.4 bits (158), Expect = 7e-14
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 35/123 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++VTG + GIG AI +A A +G  V     R E  + AE++   F             
Sbjct: 7   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFF------------ 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                  +VD+  + E V   +      G +DV++NNA +    
Sbjct: 55  -----------------------QVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG 91

Query: 123 PVT 125
              
Sbjct: 92  SAL 94

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 64.5 bits (158), Expect = 8e-14
 Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 23/117 (19%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + +VTGA  GIG A+   LA +G  V            A+      V ++   G +   
Sbjct: 8   ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAA---AQET----VRLLGGPGSKEGP 60

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHI-DVMINNAGV 118
                                + + DV++        + +   F     V+++ AG+
Sbjct: 61  PRGNH---------------AAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 64.4 bits (158), Expect = 8e-14
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 37/123 (30%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              +VTGA  GIG   ++AL A G      A+                         V+ 
Sbjct: 8   LRALVTGAGKGIGRDTVKALHASG------AK-------------------------VVA 36

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             R    + ++AKE P   +  + VD+       +A        G +D+++NNA +    
Sbjct: 37  VTRTNSDLVSLAKECP--GIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALVIMQ 90

Query: 123 PVT 125
           P  
Sbjct: 91  PFL 93

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 64.5 bits (158), Expect = 9e-14
 Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 40/118 (33%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MS+ ++VTG + GIG AI RA A  G +V    R  E  +                    
Sbjct: 20  MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------------- 59

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                  ++K D+T   +V +A+  I    G ++V+I NAGV
Sbjct: 60  --------------------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGV 97

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 64.5 bits (158), Expect = 9e-14
 Identities = 30/122 (24%), Positives = 41/122 (33%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  +VTG S GIGAAI RAL   G  V                                 
Sbjct: 13  RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVM------------------------A 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                  ++            +++VDVTK A V  A     +  G  D++  NAGV+   
Sbjct: 49  AQAVVAGLENGG--------FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMR 100

Query: 123 PV 124
           P 
Sbjct: 101 PA 102

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 34/116 (29%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TGA+ GIG A L   A +G +++                                
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEG------------------------P 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
               AE + A            + +DV   A V   F       G +D +++ AG+
Sbjct: 42  LREAAEAVGAHP----------VVMDVADPASVERGFAEALAHLGRLDGVVHYAGI 87

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 64.0 bits (157), Expect = 1e-13
 Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 31/122 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ V+TG + GIG AI    A +G  +            A          +   G +V+ 
Sbjct: 8   KLAVITGGANGIGRAIAERFAVEGADIAIADLVP-----APEA----EAAIRNLGRRVLT 58

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                  K DV++  +V      + + FG  D+++NNAG+    
Sbjct: 59  V----------------------KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI 96

Query: 123 PV 124
           P 
Sbjct: 97  PF 98

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 64.0 bits (157), Expect = 1e-13
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 37/123 (30%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           + ++VTGA  GIG   ++AL A G      AR                         V+ 
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATG------AR-------------------------VVA 36

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            +R    +D++ +E P   +  + VD+        A        G +D+++NNA V    
Sbjct: 37  VSRTQADLDSLVRECP--GIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALLQ 90

Query: 123 PVT 125
           P  
Sbjct: 91  PFL 93

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 30/121 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +I +VTG S GIG  I + L   G +V   AR AE               ++A G     
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADT-------ATRLSAYG----- 77

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                ++  D++ +A        +      +D+++NNAG +  A
Sbjct: 78  ------------------DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGA 119

Query: 123 P 123
            
Sbjct: 120 A 120

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 27/116 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +++++TG   G+G A    LAA+G ++                    VD+ +        
Sbjct: 14  RVVLITGGGSGLGRATAVRLAAEGAKLS------------------LVDVSSEGLEAS-- 53

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                  +   A   PD +V +   DV+ +A+V         +FG ID   NNAG+
Sbjct: 54  ----KAAVLETA---PDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGI 102

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 29/116 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+++VTGA  GIG AI +  A     V+      +       +    V  +   G +V+G
Sbjct: 8   KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDR---LNQI----VQELRGMGKEVLG 60

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                  K DV+K  +V E        +  IDV+ NNAG+
Sbjct: 61  V----------------------KADVSKKKDVEEFVRRTFETYSRIDVLCNNAGI 94

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 63.8 bits (156), Expect = 1e-13
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 35/124 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVI--GFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           K  +VTG++ GIG  I + LA  G  ++  GF   A             +  +A  G + 
Sbjct: 5   KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPA-----------LAEIARHGVKA 53

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           +                          D++  A++   F     +FG +D+++NNAG+  
Sbjct: 54  VHH----------------------PADLSDVAQIEALFALAEREFGGVDILVNNAGIQH 91

Query: 121 FAPV 124
            APV
Sbjct: 92  VAPV 95

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 30/127 (23%), Positives = 41/127 (32%), Gaps = 35/127 (27%)

Query: 3   KIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           K++VVTGAS   G+G    R  A  G  V                               
Sbjct: 21  KVVVVTGASGPKGMGIEAARGCAEMGAAV------------------------------A 50

Query: 61  IGFARRAEMIDAMAKE---NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
           I +A RA+  +   KE       K  + K  V       +    +   FG ID  I NAG
Sbjct: 51  ITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAG 110

Query: 118 VNEFAPV 124
               + +
Sbjct: 111 ATADSGI 117

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 30/116 (25%), Positives = 42/116 (36%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TG+S GIG A  R  A  G +V    R+A      +      +  + A G     
Sbjct: 8   KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAP--ANIDET----IASMRADGGDAAF 61

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           F                        D+       +  D    KFG IDV+INNAG 
Sbjct: 62  F----------------------AADLATSEACQQLVDEFVAKFGGIDVLINNAGG 95

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 64.2 bits (157), Expect = 1e-13
 Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K+ +VTGA  GIG  +   L  +G +V + +A   E    AE +    V  +   G    
Sbjct: 30  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTES---AEEV----VAAIKKNGSDAA 82

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                  +K +V    ++V  F+     FG +D++ +N+GV  F
Sbjct: 83  ----------------------CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSF 120

Query: 122 APV 124
             V
Sbjct: 121 GHV 123

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 29/117 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++V++G    +G  + R  A +G  ++  AR  E     E +       V   G + + 
Sbjct: 12  KVVVISGVGPALGTTLARRCAEQGADLVLAARTVER---LEDV----AKQVTDTGRRALS 64

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                    D+T DA+V    D     +G +DV+INNA   
Sbjct: 65  VG----------------------TDITDDAQVAHLVDETMKAYGRVDVVINNAFRV 99

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 63.9 bits (156), Expect = 2e-13
 Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 41/123 (33%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           MSK I+V G S  +GA +++   +K    I                   +D         
Sbjct: 21  MSKNILVLGGSGALGAEVVKFFKSKSWNTIS------------------IDFRENPN--- 59

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                                 HS  +  + + E+    + IN+K   +D  +  AG   
Sbjct: 60  --------------------ADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWS 99

Query: 121 FAP 123
              
Sbjct: 100 GGN 102

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 26/117 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  +VTG   GIG  +   L A G  V+   R  + +  A                    
Sbjct: 12  RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGA-------------------- 51

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                + ++A+        +     D+T + E   A D +    G +  +++ AG +
Sbjct: 52  ----VQELEALGANGG--AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGS 102

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 30/124 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ VVTGAS GIG  I   L   G  V    R  + +               + G Q + 
Sbjct: 6   QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVV-------AQEAQSLGGQCVP 58

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINN-KFGHIDVMINNAGVNEF 121
                                    D ++++EV   F+ ++  + G +DV++NNA     
Sbjct: 59  VV----------------------CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQ 96

Query: 122 APVT 125
             + 
Sbjct: 97  TILN 100

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 38/122 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++V+TGAS GIGA ++RA   + ++V+  +R  +                 +    +  
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK----------------PSADPDIHT 72

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    D++K             +FG ID ++NNAGV    
Sbjct: 73  V----------------------AGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAK 110

Query: 123 PV 124
           P 
Sbjct: 111 PF 112

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 63.8 bits (156), Expect = 2e-13
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 32/121 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ ++TG + G+G A++    A+G +V    + AE +           ++  A G   +G
Sbjct: 6   EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLR----------ELEVAHGGNAVG 55

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                 +  DV    +   A +     FG ID +I NAG+ +++
Sbjct: 56  ----------------------VVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYS 93

Query: 123 P 123
            
Sbjct: 94  T 94

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 63.4 bits (155), Expect = 2e-13
 Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 31/124 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVI--GFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           K+ VVTG++ GIG  I  ALAA+G  ++  GF   AE+             + A  G +V
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRA-------GLAAQHGVKV 57

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
           +                          D++K   V    D    + G ID+++NNAG+  
Sbjct: 58  LYD----------------------GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH 95

Query: 121 FAPV 124
            A +
Sbjct: 96  TALI 99

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 40/118 (33%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           +S+ ++VTG + GIG AI + LAA GH+V    R +                        
Sbjct: 14  VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------------- 53

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                +  ++VDVT    V  AF  +    G ++V+++NAG+
Sbjct: 54  --------------------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 62.9 bits (154), Expect = 2e-13
 Identities = 22/122 (18%), Positives = 36/122 (29%), Gaps = 39/122 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K + VTGA  GIG A   A    G +V GF +                     + +    
Sbjct: 8   KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-----------------QEQYPFAT 50

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                   +DV   A+V +    +  +   +D ++N AG+    
Sbjct: 51  EV----------------------MDVADAAQVAQVCQRLLAETERLDALVNAAGILRMG 88

Query: 123 PV 124
             
Sbjct: 89  AT 90

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 63.4 bits (155), Expect = 3e-13
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K+ +VTG+  GIGAA+   L   G +V + +A   +    AE +    V  + A G    
Sbjct: 19  KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKD---AEKV----VSEIKALG---- 67

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                A  I A               D+ +  E+V+ FD     FGH+D+ ++N+GV  F
Sbjct: 68  ---SDAIAIKA---------------DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSF 109

Query: 122 APV 124
             +
Sbjct: 110 GHL 112

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 63.3 bits (155), Expect = 3e-13
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K   VTG S GIGAAI + LA +G  V + +   AE    A+++    V  +   G + +
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAER---AQAV----VSEIEQAGGRAV 84

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                 +++ D      + +A        G +D+++N+AG+   
Sbjct: 85  ----------------------AIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHS 122

Query: 122 APV 124
           AP+
Sbjct: 123 APL 125

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 29/117 (24%), Positives = 41/117 (35%), Gaps = 30/117 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           + IVV GA   IG A     A +G  V + +   AE    A +     V  +   G   +
Sbjct: 9   RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEG---AATA----VAEIEKLGRSAL 61

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                   K D+T  AEV  A     +KFG I  +++ AG 
Sbjct: 62  AI----------------------KADLTNAAEVEAAISAAADKFGEIHGLVHVAGG 96

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 62.2 bits (152), Expect = 3e-13
 Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 40/120 (33%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
           +++TGA+ G+G A  RAL                                  GH ++   
Sbjct: 3   VLITGATGGLGGAFARALK---------------------------------GHDLLLSG 29

Query: 65  RRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV 124
           RRA  +  +A+E       +L  D+  + E     +    + G +D++++  G    A V
Sbjct: 30  RRAGALAELAREVG---ARALPADLADELEAKALLE----EAGPLDLLVHAVGKAGRASV 82

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 30/124 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++VTG + GIG AI+   A  G  +   AR    ++         +     KG QV G
Sbjct: 15  KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNEC-------LSKWQKKGFQVTG 67

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGH-IDVMINNAGVNEF 121
                                    D +   E  +    +++ FG  +D++INN G    
Sbjct: 68  SV----------------------CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS 105

Query: 122 APVT 125
            P  
Sbjct: 106 KPTL 109

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 29/123 (23%)

Query: 3   KIIVVTGASV-GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K+++VT A+  GIG+   R    +G  V+                               
Sbjct: 23  KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHER------------------------ 58

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
               R         +    +V ++  DVT    V         K G +DV++NNAG+   
Sbjct: 59  ----RLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQ 114

Query: 122 APV 124
            PV
Sbjct: 115 TPV 117

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 20/124 (16%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++  +TGA+ G G A    +AA+G  +I                   VDI       V  
Sbjct: 12  RVAFITGAARGQGRAHAVRMAAEGADIIA------------------VDIAGKLPSCVPY 53

Query: 63  FARRAEMIDAMAK--ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                + +    +  E  + ++ +  VD      + +  D      G +D+++ NAGV  
Sbjct: 54  DPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA 113

Query: 121 FAPV 124
               
Sbjct: 114 PQAW 117

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 63.1 bits (154), Expect = 3e-13
 Identities = 26/124 (20%), Positives = 40/124 (32%), Gaps = 36/124 (29%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + V+TGAS G G A+   LA                               + G  ++ 
Sbjct: 7   AVCVLTGASRGFGRALAPQLARL----------------------------LSPGSVMLV 38

Query: 63  FARRAEMIDAMAKE----NPDWKVHSLKVDVTKDAEVVEAFDWINNKFG----HIDVMIN 114
            AR   M+  + +E     PD KV     D+  +A V      +            ++IN
Sbjct: 39  SARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLIN 98

Query: 115 NAGV 118
           NA  
Sbjct: 99  NAAT 102

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 62.9 bits (154), Expect = 3e-13
 Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 33/120 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++VVTG   GIGA I+RA    G +V+                    D   + G  +  
Sbjct: 10  KVVVVTGGGRGIGAGIVRAFVNSGARVV------------------ICDKDESGGRAL-- 49

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                E+  A+           +  DVT++ +V         +FG +D ++NNAG +   
Sbjct: 50  ---EQELPGAVF----------ILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP 96

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K+ + TGA  GIG  I   L  +G  V + +   ++    AE +    V  +   G Q +
Sbjct: 22  KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKA---AEEV----VAELKKLGAQGV 74

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                                 +++ D++K +EVV  FD   + FG +D +++N+G+  +
Sbjct: 75  ----------------------AIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW 112

Query: 122 APV 124
              
Sbjct: 113 CDE 115

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 63.0 bits (154), Expect = 3e-13
 Identities = 28/123 (22%), Positives = 42/123 (34%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TG + GIG    +     G +V+                    DI    G +V  
Sbjct: 17  KVAIITGGAGGIGETTAKLFVRYGAKVV------------------IADIADDHGQKV-- 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                  I           +  +  DVTKD +V    D    K G +D+M  N GV    
Sbjct: 57  ----CNNI------GSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTT 106

Query: 123 PVT 125
           P +
Sbjct: 107 PYS 109

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 62.6 bits (153), Expect = 4e-13
 Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 31/126 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              V+TG +  IG +I   L  +G +V+   R +E    A+ L A   ++ AA+    + 
Sbjct: 12  PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE--GAAQRLVA---ELNAARAGSAVL 66

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVV----EAFDWINNKFGHIDVMINNAGV 118
                                  K D++  + ++    +  D     FG  DV++NNA  
Sbjct: 67  C----------------------KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASA 104

Query: 119 NEFAPV 124
               P+
Sbjct: 105 YYPTPL 110

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 63.1 bits (154), Expect = 5e-13
 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 33/117 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTGA+ GIGA I    A  G  V+                                
Sbjct: 214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA------------------------- 248

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFG-HIDVMINNAGV 118
               AE +  +A +       +L +DVT D  V +    +    G  +D+++NNAG+
Sbjct: 249 ----AEDLKRVADK---VGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI 298

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 62.2 bits (152), Expect = 5e-13
 Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 34/122 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
             I++TGAS  +G      L   GH+VI   R                            
Sbjct: 28  APILITGASQRVGLHCALRLLEHGHRVIISYRTEH------------------------- 62

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                    A   E       +L  D + +  ++   D +  +   +  +++NA      
Sbjct: 63  ---------ASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAE 113

Query: 123 PV 124
             
Sbjct: 114 TP 115

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 62.6 bits (153), Expect = 5e-13
 Identities = 30/124 (24%), Positives = 42/124 (33%), Gaps = 30/124 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           KI +VTGAS GIG A     A +G +V+  AR          L     D +A  G +   
Sbjct: 9   KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNA---LAEL----TDEIAGGGGEAAA 61

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV-NEF 121
                                    DV  +A      +    +FG +D   NNAG     
Sbjct: 62  L----------------------AGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAM 99

Query: 122 APVT 125
             ++
Sbjct: 100 GEIS 103

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 62.2 bits (152), Expect = 6e-13
 Identities = 15/117 (12%), Positives = 31/117 (26%), Gaps = 35/117 (29%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              +VT      G      L+  GH V       +  D  E+    +             
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYP------------ 49

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                  ++    + E  E  + + + +G +DV+++N    
Sbjct: 50  -----------------------QLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFA 83

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 62.2 bits (152), Expect = 7e-13
 Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 31/123 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  VVTGA  GIG AI    A  G  V+ + R   + + A+         +A  G     
Sbjct: 32  RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADE--------IADGGG---- 79

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                ++  D+          + +      +DV++NNAG+   A
Sbjct: 80  ------------------SAEAVVADLADLEGAANVAEEL-AATRRVDVLVNNAGIIARA 120

Query: 123 PVT 125
           P  
Sbjct: 121 PAE 123

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 62.3 bits (152), Expect = 8e-13
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 26/123 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TG+S GIG +     A +G QV                          +  +   
Sbjct: 27  KSVIITGSSNGIGRSAAVIFAKEGAQVT------------------ITGRNEDRLEET-- 66

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                + I          K++++  DVT+ +   +  +    KFG ID+++NNAG N   
Sbjct: 67  ----KQQILKAGVPAE--KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLAD 120

Query: 123 PVT 125
              
Sbjct: 121 GTA 123

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 61.8 bits (151), Expect = 9e-13
 Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 40/123 (32%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA+ GIG A++ AL A G +V                     D   A     + 
Sbjct: 29  KVALVTGAAGGIGGAVVTALRAAGARVA------------------VADRAVAGIAADLH 70

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    D+ + A        +    G +D+++NNAGV    
Sbjct: 71  LP----------------------GDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRG 108

Query: 123 PVT 125
            +T
Sbjct: 109 RIT 111

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 61.8 bits (151), Expect = 1e-12
 Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 20/124 (16%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++  +TGA+ G G +    LAA+G  +I                    DI A     V  
Sbjct: 16  RVAFITGAARGQGRSHAVRLAAEGADIIA------------------CDICAPVSASVTY 57

Query: 63  FARRAEMIDAMAK--ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                E +D  A+  E+   K  +  +DV  DA + E       +FG +DV++ NAGV  
Sbjct: 58  APASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS 117

Query: 121 FAPV 124
           +  V
Sbjct: 118 WGRV 121

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TGA  G G  + +  A  G +V+                   VD   A   +V  
Sbjct: 10  KVALITGAGSGFGEGMAKRFAKGGAKVV------------------IVDRDKAGAERV-- 49

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
               A  I   A         ++  D++K+A+V  A +   +KFG +D+++NNAG+
Sbjct: 50  ----AGEIGDAA--------LAVAADISKEADVDAAVEAALSKFGKVDILVNNAGI 93

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 61.4 bits (150), Expect = 1e-12
 Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 36/116 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TGAS GIG+AI R L   G +VI      E                         
Sbjct: 15  KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEE------------------------- 49

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
              + + +    K+           ++    E          K  ++D+++ NAG+
Sbjct: 50  ---KLKSLGNALKD----NYTIEVCNLANKEECSNLIS----KTSNLDILVCNAGI 94

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 61.1 bits (149), Expect = 1e-12
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTGAS G+GAA+ R LA +G  V+G                   D+    G     
Sbjct: 8   RVFIVTGASSGLGAAVTRMLAQEGATVLGL------------------DLKPPAG----- 44

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                   +  A E     V     DVT +A+   A  +   +FGH+  ++N AG 
Sbjct: 45  --------EEPAAELGA-AVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGT 91

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 31/122 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  +VTG++ GIG AI  +L A+G  V+   RR E ++                      
Sbjct: 11  KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVN---------------------- 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                E I  +  + PD  +  +  D+  +    +  +    K+  +D++INN G+ E  
Sbjct: 49  -----ETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----KYPKVDILINNLGIFEPV 99

Query: 123 PV 124
             
Sbjct: 100 EY 101

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 60.8 bits (148), Expect = 2e-12
 Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  VVTG + GIG A     A +G +++                    D+      Q   
Sbjct: 32  RAAVVTGGASGIGLATATEFARRGARLV------------------LSDVDQPALEQA-- 71

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                  +     +      H +  DV    E+V   D      G +DV+ +NAG+    
Sbjct: 72  ----VNGLRGQGFD-----AHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAG 122

Query: 123 PV 124
           P+
Sbjct: 123 PL 124

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 60.4 bits (147), Expect = 3e-12
 Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + V+TG + G+G A    L  +G   +                    D+  + G     
Sbjct: 13  LVAVITGGASGLGLATAERLVGQGASAVLL------------------DLPNSGG----- 49

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                   +A AK+  +        DVT + +V  A      KFG +DV +N AG+
Sbjct: 50  --------EAQAKKLGN-NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGI 96

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 27/123 (21%), Positives = 42/123 (34%), Gaps = 38/123 (30%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M +  +VTG S GIG AI  AL A+G++V   +R  E                       
Sbjct: 1   MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE----------------------- 37

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                 A+ + A+           L  D+    +            G + V+++ A VN 
Sbjct: 38  ----EAAQSLGAVP----------LPTDLE-KDDPKGLVKRALEALGGLHVLVHAAAVNV 82

Query: 121 FAP 123
             P
Sbjct: 83  RKP 85

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 59.5 bits (145), Expect = 5e-12
 Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 40/122 (32%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              +VTG S GIG A++  L    +  +      +                         
Sbjct: 5   ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ------------------------- 39

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                    + + EN    +  +K D+TK  ++    D I  K    D +  NAG+    
Sbjct: 40  ---------SFSAEN----LKFIKADLTKQQDITNVLDII--KNVSFDGIFLNAGILIKG 84

Query: 123 PV 124
            +
Sbjct: 85  SI 86

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 59.6 bits (145), Expect = 6e-12
 Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 33/127 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
              VVTGA+  IG AI   L   G++V I +   AE    A SL     ++   + +  +
Sbjct: 24  PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEA---AVSLAD---ELNKERSNTAV 77

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKD----AEVVEAFDWINNKFGHIDVMINNAG 117
                                   + D+T      A   E  +     FG  DV++NNA 
Sbjct: 78  VC----------------------QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNAS 115

Query: 118 VNEFAPV 124
                P+
Sbjct: 116 AFYPTPL 122

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 59.1 bits (144), Expect = 8e-12
 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 32/121 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TGA  GIG    R LA  G +V+                    D+          
Sbjct: 12  KVAIITGACGGIGLETSRVLARAGARVV------------------LADLPETDLAGA-- 51

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A  +   A            VD+T +  V    D+  + FG +D++ NNA  ++ A
Sbjct: 52  ----AASVGRGA--------VHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPA 99

Query: 123 P 123
            
Sbjct: 100 D 100

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 59.3 bits (144), Expect = 8e-12
 Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 35/121 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
             I++TG + G+G  +++AL                                     +  
Sbjct: 22  NSILITGCNRGLGLGLVKALLNL----------------------------PQPPQHLFT 53

Query: 63  FARRAEMID---AMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFG--HIDVMINNAG 117
             R  E       +AK + +  +H L++D+       +    I        ++V+ NNAG
Sbjct: 54  TCRNREQAKELEDLAKNHSN--IHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAG 111

Query: 118 V 118
           +
Sbjct: 112 I 112

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 38/122 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+I++T A+ GIG A   A A +G +VI                    DI  +K  ++  
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVI------------------ATDINESKLQEL-- 46

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                +                  +DVTK  ++ +  +    +   +DV+ N AG     
Sbjct: 47  ----EKYPGIQT----------RVLDVTKKKQIDQFAN----EVERLDVLFNVAGFVHHG 88

Query: 123 PV 124
            V
Sbjct: 89  TV 90

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 17/118 (14%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  VTGA+ G G +    LA +G  +I        +D  +         + A       
Sbjct: 12  KVAFVTGAARGQGRSHAVRLAQEGADIIA-------VDICKP--------IRAGVVDTAI 56

Query: 63  FARRAEMIDAMAK--ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A   E +   A   +  + ++ + +VDV     +  A D    + G +D+++ NAG+
Sbjct: 57  PASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 57.6 bits (140), Expect = 3e-11
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 19/117 (16%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  +TGA+ G G A    LAA G  +I                   VD+          
Sbjct: 14  KVAFITGAARGQGRAHAVRLAADGADIIA------------------VDLCDQIASVPYP 55

Query: 63  FARRAEMIDAMAK-ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A   E+   +   E+   ++ + + DV     +  A     ++ G +D+++ NAG+
Sbjct: 56  LATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI 112

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 57.2 bits (139), Expect = 4e-11
 Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 19/117 (16%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  +TGA+ G G +    LA +G  +I                   +D+        + 
Sbjct: 29  KVAFITGAARGQGRSHAITLAREGADIIA------------------IDVCKQLDGVKLP 70

Query: 63  FARRAEMIDAMAK-ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            +   ++ + + + E    ++ + +VDV     +  A D    + G +D+++ NA +
Sbjct: 71  MSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAAL 127

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 56.7 bits (138), Expect = 5e-11
 Identities = 18/117 (15%), Positives = 28/117 (23%), Gaps = 35/117 (29%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            I +VT A    G A + AL   G+ V+         D AE             G     
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFA--DAAERQ----RFESENPG----- 50

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                                        + +     D        ID +++N  + 
Sbjct: 51  ------------------------TIALAEQKPERLVDATLQHGEAIDTIVSNDYIP 83

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 56.8 bits (138), Expect = 6e-11
 Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 19/117 (16%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TG + G+G +   ALA  G  +                     D           
Sbjct: 11  KTALITGGARGMGRSHAVALAEAGADIAI------------------CDRCENSDVVGYP 52

Query: 63  FARRAEMIDAMAK-ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
            A   ++ + +A  E    +  S KVDV   A +        +  G ID+ I NAG+
Sbjct: 53  LATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI 109

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 56.5 bits (137), Expect = 8e-11
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 19/123 (15%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  +TGA+ G G      LA  G  ++                   +D+   + +    
Sbjct: 47  KVAFITGAARGQGRTHAVRLAQDGADIV------------------AIDLCRQQPNLDYA 88

Query: 63  FARRAEMIDAMAK-ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                E+ + +   E    ++ + + DV   A +    D    +FGHID++++N G++  
Sbjct: 89  QGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQ 148

Query: 122 APV 124
             V
Sbjct: 149 GEV 151

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 56.1 bits (136), Expect = 9e-11
 Identities = 28/121 (23%), Positives = 41/121 (33%), Gaps = 27/121 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            +I +TG++ GIGAA+   LA  GH VIG  R    I+          D+    G     
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE---------ADLSTPGG----- 47

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
              R   + A+                  D  V  A   +      + V +N  GV+   
Sbjct: 48  ---RETAVAAVLDR----------CGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALL 94

Query: 123 P 123
            
Sbjct: 95  D 95

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 28/115 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVT  S G+G A    LA  G +++ F+R  E                         
Sbjct: 8   KLAVVTAGSSGLGFASALELARNGARLLLFSRNRE------------------------- 42

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
             +       +A      +V  +  D+  +   ++         G  D+++ + G
Sbjct: 43  --KLEAAASRIASLVSGAQVDIVAGDIR-EPGDIDRLFEKARDLGGADILVYSTG 94

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 19/122 (15%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+++VTG + G G +    LA +G  +I                    DI          
Sbjct: 11  KVVLVTGGARGQGRSHAVKLAEEGADII------------------LFDICHDIETNEYP 52

Query: 63  FARRAEMIDAMAK-ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
            A   ++ +A  + E    K ++ +VDV   A V         +FG +DV++ NAG+   
Sbjct: 53  LATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPL 112

Query: 122 AP 123
             
Sbjct: 113 GA 114

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 55.0 bits (133), Expect = 1e-10
 Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 51/123 (41%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
             I++ GAS  +G+A+   L                                    +VI 
Sbjct: 4   MKILLIGASGTLGSAVKERLEK--------------------------------KAEVIT 31

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             R +                 + VD+T    + + ++    + G +D +++  G   F+
Sbjct: 32  AGRHSG---------------DVTVDITNIDSIKKMYE----QVGKVDAIVSATGSATFS 72

Query: 123 PVT 125
           P+T
Sbjct: 73  PLT 75

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 55.8 bits (135), Expect = 1e-10
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              +V+G + G+G A +R L A G  V+                    D+ A KG     
Sbjct: 31  ASAIVSGGAGGLGEATVRRLHADGLGVVIA------------------DLAAEKG----- 67

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                    A+A E  + +   +  +VT +  V+ A +  N        ++ + G 
Sbjct: 68  --------KALADELGN-RAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGF 114

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 36/129 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           K+ +VTGAS GIG AI + LA  G  V I +  R E    AE      V  + + G    
Sbjct: 8   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE---AEET----VYEIQSNG---- 56

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKF------GHIDVMINN 115
                A  I A               ++     V   +  ++N+          D++INN
Sbjct: 57  ---GSAFSIGA---------------NLESLHGVEALYSSLDNELQNRTGSTKFDILINN 98

Query: 116 AGVNEFAPV 124
           AG+   A +
Sbjct: 99  AGIGPGAFI 107

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 54.2 bits (131), Expect = 4e-10
 Identities = 28/116 (24%), Positives = 40/116 (34%), Gaps = 36/116 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + VVTG + G+G A  + L   G QV+    R E             D+VA  G +   
Sbjct: 10  AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE-------------DVVADLGDRARF 56

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                    DVT +A V  A D      G + +++N AG 
Sbjct: 57  A----------------------AADVTDEAAVASALDLAE-TMGTLRIVVNCAGT 89

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 44/115 (38%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++V  AS GIG A+   L+ +G +V   AR  E++                 GH+ + 
Sbjct: 20  KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL--------------KRSGHRYV- 64

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                                    D+ KD +++        K   +D+++ NAG
Sbjct: 65  -----------------------VCDLRKDLDLLFE------KVKEVDILVLNAG 90

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 36/116 (31%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           + +V+TGA+ G+GA   R LA +G  VI   R                     KG     
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTR------------------KGEA--- 55

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                      A      +V   ++D+  D   V  F    +     DV+INNAG+
Sbjct: 56  -----------AARTMAGQVEVRELDLQ-DLSSVRRF---ADGVSGADVLINNAGI 96

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 27/121 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +  +VTG   GIG A   A A +G  V      AE  D A+ +      ++   G     
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEED-AQQV----KALIEECGR---- 100

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             K   L  D++ ++             G +D++   AG     
Sbjct: 101 ------------------KAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAI 142

Query: 123 P 123
           P
Sbjct: 143 P 143

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 47/123 (38%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            IIV++G + GIGAA  + L A GHQ++G   R               +++A        
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA-------------EVIA-------- 40

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGVNEF 121
                                    D++      +A  D +      +D ++  AG+   
Sbjct: 41  -------------------------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ 75

Query: 122 APV 124
             V
Sbjct: 76  TKV 78

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 48.0 bits (115), Expect = 7e-08
 Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 42/118 (35%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           M +  +VTG + G+G A   AL A+G++V+                    D+        
Sbjct: 1   MERSALVTGGASGLGRAAALALKARGYRVVVL------------------DLRREGE--- 39

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                                +  ++ DVT++ +V  A      +   +  +++ AGV
Sbjct: 40  --------------------DLIYVEGDVTREEDVRRAVARAQ-EEAPLFAVVSAAGV 76

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 16/122 (13%), Positives = 32/122 (26%), Gaps = 37/122 (30%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
             ++V G    +G+AIL      G+ V+     A   D A+S      +           
Sbjct: 4   GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN--DQADSNILVDGN----------- 50

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    + T+  + +      + +   +D +   AG     
Sbjct: 51  ------------------------KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGG 86

Query: 123 PV 124
             
Sbjct: 87  SA 88

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 14/118 (11%), Positives = 30/118 (25%), Gaps = 37/118 (31%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
            ++ ++V G    +G+  ++A  A+   V                         A    +
Sbjct: 6   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN---------------EEASASVI 50

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
           +                            T+ A+ V A          +D ++  AG 
Sbjct: 51  VKMT----------------------DSFTEQADQVTAEVGKLLGDQKVDAILCVAGG 86

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 27/120 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV----IGFARRAEMIDFAESLFAFFVDIVAAKGH 58
           ++++VTGA  GIG A   A AA+G +V    IG            +  +   +I AA G 
Sbjct: 28  RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG- 86

Query: 59  QVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                       +A+A  +          +V    +           FG +DV++NNAG+
Sbjct: 87  ------------EAVA--DGS--------NVADWDQAAGLIQTAVETFGGLDVLVNNAGI 124

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 43.7 bits (104), Expect = 3e-06
 Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 28/116 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TG   GIG A+  A A +G  +   A   E  D A          V  +G     
Sbjct: 48  KNVLITGGDSGIGRAVSIAFAKEGANIA-IAYLDEEGD-ANET----KQYVEKEGV---- 97

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV 118
                             K   L  D++ +    +       + G +++++NN   
Sbjct: 98  ------------------KCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ 135

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 43.7 bits (103), Expect = 3e-06
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 7/62 (11%)

Query: 3   KIIVVTGASVG-IGAAILRALAAKGHQVIGFARR--AEMIDFAESLFAFFVDIVAAKGHQ 59
           K +++TGA  G IGA +L+ L   G +V+    R   ++ D+ +S++A +     AKG  
Sbjct: 477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKY----GAKGST 532

Query: 60  VI 61
           +I
Sbjct: 533 LI 534

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 42.3 bits (100), Expect = 8e-06
 Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 8/68 (11%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIV--------AAK 56
          I + G++  +G ++L++L+   +Q+   AR+ E +    ++ A   D+            
Sbjct: 3  IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLH 62

Query: 57 GHQVIGFA 64
          G   I   
Sbjct: 63 GMDAIINV 70

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVD 51
          I V GA+   G+AI+     +GH+V+   R  +            + 
Sbjct: 3  IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLV 49

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 1  MSKI--IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFA 42
          M K+  IV+ GAS  +G+A+L     +G +V    R  E I   
Sbjct: 1  MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE 44

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 19/116 (16%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQV------------IGFARRAE-MIDFAESLFAF 48
           +K +++ G  +G G   +       ++V            +      E +++  + L   
Sbjct: 150 AKNVLIDGV-LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208

Query: 49  FVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH--SLKV--DVTKDAEVVEAFD 100
                 ++         R   I A  +     K +   L V  +V ++A+   AF+
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV-QNAKAWNAFN 263

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAE 37
          I + GA+   G+ IL     +GH+V    R A 
Sbjct: 3  IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESL 45
            V GA+  +G    RA+ A GH ++   R +  I     L
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYL 56

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 4/55 (7%)

Query: 1  MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAA 55
          + KI  + GA+   G   L      G++V    R +       S       +V  
Sbjct: 3  VKKI-AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR---LPSEGPRPAHVVVG 53

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 37/123 (30%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV----IGFARRAEMIDF--AESLFAFFVDIVAAK 56
           ++ VVTGA  G+G       A +G +V    +G     +      A+ +     +I  A 
Sbjct: 20  RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVD---EIRKAG 76

Query: 57  GHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVE-AFDWINNKFGHIDVMINN 115
           G             +A+A  + +         V   A+V+E A       FG +D+++NN
Sbjct: 77  G-------------EAVA--DYN--------SVIDGAKVIETAIK----AFGRVDILVNN 109

Query: 116 AGV 118
           AG+
Sbjct: 110 AGI 112

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 19/101 (18%)

Query: 1   MSKIIVVTGASVGIGAAILR-ALAAKGHQVIGFARRAEMIDFAESLFAFFVDIV------ 53
           M   I + GA+  I   +    L      +  + R+ +     E +    V ++      
Sbjct: 4   MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN 63

Query: 54  ------AAKGHQVI------GFARRAEMIDAMAKENPDWKV 82
                 A    +V+        +  A ++ A+++ N    +
Sbjct: 64  PGXLEQAVTNAEVVFVGAMESGSDMASIVKALSRXNIRRVI 104

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESL 45
          ++V GA+  +   +L  L  KGH+ +   R  E        
Sbjct: 24 VLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER 64

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 37.5 bits (87), Expect = 4e-04
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 1  MS---KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE 37
          M+   K I V GA+   GA+++R  AA GH V       +
Sbjct: 1  MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK 40

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 5   IVVTGASVG-IGAAILRALAAKGHQVIGFARRAE 37
           + +TG+  G +G A+   L   GH+VI   R+  
Sbjct: 150 VAITGSR-GLVGRALTAQLQTGGHEVIQLVRKEP 182

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 36.8 bits (85), Expect = 6e-04
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 1  MSKI--IVVTGASVGIGAAILRALAAKGHQVIGFARRA 36
          M     I++ GA+  IG  + +A    GH      R +
Sbjct: 1  MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 37/123 (30%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQV----IGFARRAEMIDF--AESLFAFFVDIVAAK 56
           ++++VTGA  G+G A   A A +G  V    +G   +        A+ +     +I    
Sbjct: 10  RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVE---EIRRRG 66

Query: 57  GHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVE-AFDWINNKFGHIDVMINN 115
           G              A+A  N D         V    ++V+ A D     FG IDV++NN
Sbjct: 67  G-------------KAVA--NYD--------SVEAGEKLVKTALD----TFGRIDVVVNN 99

Query: 116 AGV 118
           AG+
Sbjct: 100 AGI 102

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 36.8 bits (85), Expect = 7e-04
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 1  MSKI--IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFA 42
          M K   +++ G +  IG  I+ A  + GH      R   + +  
Sbjct: 1  MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNID 44

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 37.0 bits (86), Expect = 8e-04
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 31/120 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++++TGA  G+G       A  G +V+       + D   +L     +  AA    V  
Sbjct: 9   KVVIITGAGGGLGKYYSLEFAKLGAKVV-------VNDLGGALNGQGGNSKAA--DVV-- 57

Query: 63  FARRAEMIDAM---AKENPDWKVHSLKVDVTKDAEVVE-AFDWINNKFGHIDVMINNAGV 118
                + I      A  + +        +V    ++VE A       FG + V+INNAG+
Sbjct: 58  ----VDEIVKNGGVAVADYN--------NVLDGDKIVETAVK----NFGTVHVIINNAGI 101

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	125
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.89
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.89
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.89
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.88
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.87
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.86
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.85
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.84
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.84
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.84
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.84
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.84
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.83
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.83
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.83
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.83
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.83
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.83
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.83
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.83
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.83
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.83
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.83
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.82
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.82
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.82
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.82
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.82
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.82
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.82
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.82
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.82
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.82
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.82
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.82
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.82
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.82
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.82
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.82
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.82
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.82
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.82
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.82
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.81
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.81
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.81
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.81
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.81
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.81
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.81
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.81
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.81
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.81
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.81
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.81
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.81
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.81
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.81
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.81
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.81
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.81
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.81
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.81
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.81
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.8
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.8
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.8
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.8
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.8
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.8
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.8
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.8
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.8
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.8
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.8
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.8
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.8
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.8
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.8
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.8
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.8
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.8
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.8
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.8
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.8
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.8
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.8
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.8
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.8
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.8
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.8
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.8
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.8
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.8
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.79
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.79
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.79
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.79
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.79
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.79
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.79
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.79
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.79
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.79
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.79
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.79
1spx_A	278	Short-chain reductase family member (5L265); paral	99.79
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.79
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.79
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.79
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.79
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.79
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.78
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.78
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.78
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.78
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.78
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.78
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.78
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.78
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.78
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.78
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.78
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.78
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.78
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.78
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.78
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.77
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.77
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.77
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.77
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.77
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.77
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.77
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.77
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.77
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.77
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.77
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.77
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.77
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.77
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.77
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.77
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.77
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.77
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.77
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.77
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.77
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.77
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.77
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.76
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.76
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.76
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.76
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.76
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.76
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.76
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.76
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.76
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.76
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.75
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.75
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.75
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.75
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.75
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.75
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.75
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.75
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.75
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.75
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.75
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.75
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.75
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.74
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.74
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.74
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.74
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.74
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.74
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.74
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.74
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.73
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.73
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.73
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.72
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.72
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.72
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.7
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.7
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.7
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.7
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.69
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.69
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.68
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.68
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.67
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.67
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.65
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.64
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.64
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.64
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.63
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.63
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.63
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.63
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.62
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.61
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.61
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.61
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.61
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.61
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.6
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.59
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.59
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.58
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.58
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.57
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.56
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.56
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.55
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.53
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.52
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.51
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.51
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.51
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.5
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.49
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.49
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.49
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.48
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.48
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.47
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.47
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.46
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.46
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.45
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.44
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.43
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.43
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.43
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.42
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.42
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.41
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.4
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.4
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.4
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.4
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.4
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.39
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.39
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.39
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.39
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.38
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.38
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.38
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.38
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.38
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.38
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.37
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.37
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.37
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.37
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.36
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.36
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.36
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.36
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.36
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.36
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.35
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.35
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.35
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.34
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.34
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.34
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.33
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.33
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.32
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.31
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.3
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.29
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.28
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.28
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.27
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.27
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.27
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.26
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.26
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.26
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.26
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.24
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.23
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.21
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.21
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.2
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.19
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.18
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.18
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.17
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.17
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.16
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.15
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.15
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.14
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.14
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.13
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.11
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.06
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.06
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.03
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.03
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.98
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.98
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.98
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	98.94
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.91
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.89
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.86
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.78
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.71
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.67
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.67
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.64
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.63
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.6
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.57
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.56
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.55
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.54
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.53
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.53
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.53
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.52
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.48
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.45
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.42
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.42
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.4
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.4
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.31
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.29
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.28
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.26
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.24
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.24
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	98.18
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.16
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.14
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.14
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.13
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.13
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.11
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.09
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.08
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.07
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.06
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.03
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.01
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.96
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.93
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.91
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.9
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.88
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.86
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.86
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.81
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.81
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.8
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.78
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.77
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.74
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.74
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.69
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.63
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.62
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.61
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.6
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.59
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.58
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.57
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.56
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.56
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.53
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.53
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.47
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.47
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.45
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.45
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.45
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.44
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.43
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.42
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.42
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.41
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.37
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.36
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.36
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.34
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.33
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.32
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.32
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.32
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.31
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.3
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.29
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.27
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.21
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.19
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.1
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.05
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.05
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.05
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.05
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.04
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.99
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.95
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.94
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.94
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.83
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.81
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.75
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.73
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.72
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.71
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.68
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.62
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.62
1lnq_A	336	MTHK channels, potassium channel related protein;	96.61
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.6
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.56
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.56
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.51
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.48
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.48
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.44
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	96.43
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.4
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.37
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.35
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.33
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.29
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.17
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.16
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.04
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.04
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.02
2w70_A	449	Biotin carboxylase; ligase, ATP-binding, fatty aci	95.99
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.98
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.89
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.85
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.83
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.75
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.66
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.66
2l82_A	162	Designed protein OR32; structural genomics, northe	95.61
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.61
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.51
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.5
4dzz_A	206	Plasmid partitioning protein PARF; deviant walker	95.5
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.48
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.47
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.46
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.42
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.4
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.38
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.31
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	95.29
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	95.28
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	95.27
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.27
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.25
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.24
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	95.2
3q9l_A	260	Septum site-determining protein MIND; ATPase, bact	95.14
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	95.12
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	95.09
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	95.05
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.02
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.01
3ouz_A	446	Biotin carboxylase; structural genomics, center fo	94.99
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	94.96
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.94
3fbs_A	297	Oxidoreductase; structural genomics, PSI2, MCSG, p	94.94
1ulz_A	451	Pyruvate carboxylase N-terminal domain; biotin car	94.94
1g3q_A	237	MIND ATPase, cell division inhibitor; alpha-beta-a	94.93
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	94.91
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	94.88
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	94.84
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	94.73
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	94.73
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	94.69
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	94.65
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	94.61
2nvu_B	805	Maltose binding protein/NEDD8-activating enzyme E1	94.6
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	94.57
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	94.56
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	94.53

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.89  E-value=6.4e-23  Score=143.05  Aligned_cols=91  Identities=24%  Similarity=0.300  Sum_probs=79.1

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |.|++||||+++|||+++++.|+++|++|++++|+++..                               +++....  .
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-------------------------------~~~~~~~--~   47 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS-------------------------------ADFAKER--P   47 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHTTC--T
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHhc--C
Confidence            889999999999999999999999999999999987644                               2232222  2


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        48 ~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~   91 (247)
T 3ged_A           48 NLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGIL   91 (247)
T ss_dssp             TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGG
T ss_pred             CEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            67889999999999999999999999999999999999887665

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.89  E-value=8.6e-23  Score=142.97  Aligned_cols=94  Identities=33%  Similarity=0.536  Sum_probs=81.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~---------------------------~~~~~l~~~--g~~   59 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLA---------------------------ESVDTLTRK--GYD   59 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            899999999999999999999999999999999877552                           222444333  337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....|+
T Consensus        60 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~  102 (255)
T 4g81_D           60 AHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPM  102 (255)
T ss_dssp             EEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCG
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCh
Confidence            8899999999999999999999999999999999999988775

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.89  E-value=1.1e-22  Score=143.68  Aligned_cols=92  Identities=30%  Similarity=0.472  Sum_probs=79.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+.++                           +..+++    + .+
T Consensus        29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~---------------------------~~~~~~----g-~~   76 (273)
T 4fgs_A           29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLD---------------------------AAIAEI----G-GG   76 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHH----C-TT
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHc----C-CC
Confidence            799999999999999999999999999999999876552                           111222    2 26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT  125 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~  125 (125)
                      +..+++|++|++++.++++++.+++|+||+||||||+....|++
T Consensus        77 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~  120 (273)
T 4fgs_A           77 AVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLG  120 (273)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTT
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChh
Confidence            78899999999999999999999999999999999998887763

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.88  E-value=2.4e-22  Score=140.64  Aligned_cols=94  Identities=30%  Similarity=0.480  Sum_probs=80.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..+                           +..+++...  +.+
T Consensus         7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~---------------------------~~~~~i~~~--g~~   57 (254)
T 4fn4_A            7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLN---------------------------QIVQELRGM--GKE   57 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            899999999999999999999999999999999877552                           222333332  337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC-cCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF-APV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~-~~~  124 (125)
                      +.++++|++|++++.++++++.+++|+||+||||||+... .|+
T Consensus        58 ~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~  101 (254)
T 4fn4_A           58 VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPV  101 (254)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCG
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCh
Confidence            8999999999999999999999999999999999998753 443

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.87  E-value=1.9e-21  Score=136.34  Aligned_cols=93  Identities=35%  Similarity=0.500  Sum_probs=78.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+....                            .+.+...  +.+
T Consensus         7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~----------------------------~~~~~~~--~~~   56 (258)
T 4gkb_A            7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF----------------------------LDALAQR--QPR   56 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH----------------------------HHHHHHH--CTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH----------------------------HHHHHhc--CCC
Confidence            8999999999999999999999999999999998764311                            1222222  226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        57 ~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~   99 (258)
T 4gkb_A           57 ATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGL   99 (258)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred             EEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCc
Confidence            7889999999999999999999999999999999998765544

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.86  E-value=4.2e-21  Score=134.20  Aligned_cols=93  Identities=19%  Similarity=0.333  Sum_probs=77.6

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||++||||+++  |||+++++.|+++|++|++++|+++..+.                           . ........+
T Consensus         6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~---------------------------~-~~~~~~~~~   57 (256)
T 4fs3_A            6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKE---------------------------L-EKLLEQLNQ   57 (256)
T ss_dssp             TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHH---------------------------H-HHHHGGGTC
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH---------------------------H-HHHHHhcCC
Confidence            89999999865  99999999999999999999999765521                           1 222222233


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      .++.++++|++|++++.++++++.+++|++|+||||||+....
T Consensus        58 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~  100 (256)
T 4fs3_A           58 PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANME  100 (256)
T ss_dssp             SSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGG
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEecccccccc
Confidence            4788999999999999999999999999999999999987653

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.85  E-value=1.9e-20  Score=131.16  Aligned_cols=96  Identities=26%  Similarity=0.342  Sum_probs=80.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+....++.+
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   60 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLR---------------------------AAESALRQRFPGAR   60 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHSTTCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHhcCCce
Confidence            789999999999999999999999999999999876552                           22233333233435


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        61 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~  103 (265)
T 3lf2_A           61 LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTF  103 (265)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCT
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.84  E-value=2e-20  Score=131.42  Aligned_cols=94  Identities=33%  Similarity=0.491  Sum_probs=79.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   54 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIE---------------------------AIATEIRDA--GGT   54 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHHHHT--TCE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            899999999999999999999999999999999876542                           222333222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....++
T Consensus        55 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~   97 (264)
T 3tfo_A           55 ALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPL   97 (264)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876553

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.84  E-value=3e-20  Score=130.04  Aligned_cols=95  Identities=32%  Similarity=0.401  Sum_probs=80.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+... ...+
T Consensus        10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~-~~~~   61 (262)
T 3pk0_A           10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADID---------------------------ACVADLDQL-GSGK   61 (262)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHTT-SSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhh-CCCc
Confidence            799999999999999999999999999999999876542                           222333322 2237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        62 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~  104 (262)
T 3pk0_A           62 VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPL  104 (262)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCT
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence            8899999999999999999999999999999999999876654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=2.8e-20  Score=129.48  Aligned_cols=96  Identities=27%  Similarity=0.428  Sum_probs=79.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC-c
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD-W   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   80 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.....+ .
T Consensus         7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   59 (250)
T 3nyw_A            7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLE---------------------------KVHDEIMRSNKHVQ   59 (250)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHH---------------------------HHHHHHHHHCTTSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHHhccccC
Confidence            789999999999999999999999999999999876552                           112223222212 3


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        60 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  103 (250)
T 3nyw_A           60 EPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL  103 (250)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
T ss_pred             cceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCC
Confidence            68889999999999999999999999999999999999876543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.84  E-value=1.2e-20  Score=130.23  Aligned_cols=91  Identities=30%  Similarity=0.409  Sum_probs=74.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+    .. +
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~----~~-~   50 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQ---------------------------QQELLL----GN-A   50 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHH----GG-G
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHh----cC-C
Confidence            689999999999999999999999999999999876542                           111222    11 5


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....++
T Consensus        51 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~   93 (235)
T 3l6e_A           51 VIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPV   93 (235)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC-----
T ss_pred             ceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCh
Confidence            7889999999999999999999999999999999999766543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.83  E-value=5.6e-20  Score=130.81  Aligned_cols=95  Identities=25%  Similarity=0.381  Sum_probs=80.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+... ...+
T Consensus        41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~-~~~~   92 (293)
T 3rih_A           41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELS---------------------------SVTAELGEL-GAGN   92 (293)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH---------------------------HHHHHHTTS-SSSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhh-CCCc
Confidence            789999999999999999999999999999999876552                           222333322 2237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        93 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  135 (293)
T 3rih_A           93 VIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARL  135 (293)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred             EEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.83  E-value=2.3e-20  Score=130.89  Aligned_cols=95  Identities=33%  Similarity=0.502  Sum_probs=79.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus        20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~-~~~   71 (266)
T 4egf_A           20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD---------------------------AARRALGEQF-GTD   71 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHH-CCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHhc-CCc
Confidence            789999999999999999999999999999999876552                           1112222211 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        72 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~  114 (266)
T 4egf_A           72 VHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPV  114 (266)
T ss_dssp             EEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCG
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCh
Confidence            8899999999999999999999999999999999999876553

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.83  E-value=2.8e-20  Score=127.83  Aligned_cols=95  Identities=35%  Similarity=0.498  Sum_probs=78.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~-~~~   53 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLE---------------------------KIAHELMQEQ-GVE   53 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHH-CCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhhc-CCe
Confidence            699999999999999999999999999999999876542                           1122222121 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.++++++|+||||||+....++
T Consensus        54 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~   96 (235)
T 3l77_A           54 VFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRL   96 (235)
T ss_dssp             EEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCT
T ss_pred             EEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCc
Confidence            8899999999999999999999999999999999999876654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.83  E-value=4.7e-20  Score=128.64  Aligned_cols=94  Identities=28%  Similarity=0.506  Sum_probs=79.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+..  .+.+
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~--~~~~   56 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLE---------------------------EAKLEIEQ--FPGQ   56 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHCC--STTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHh--cCCc
Confidence            799999999999999999999999999999999876552                           11122222  2237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        57 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~   99 (257)
T 3imf_A           57 ILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPA   99 (257)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            8899999999999999999999999999999999998776553

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.83  E-value=7.2e-20  Score=127.48  Aligned_cols=94  Identities=31%  Similarity=0.432  Sum_probs=77.6

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.
T Consensus         1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~   51 (256)
T 1geg_A            1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAK---------------------------AVASEINQA--GG   51 (256)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            7899999999999999999999999999999999876441                           111222221  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        52 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~   94 (256)
T 1geg_A           52 HAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP   94 (256)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            6788999999999999999999999999999999999876544

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.83  E-value=8.8e-20  Score=127.07  Aligned_cols=93  Identities=24%  Similarity=0.358  Sum_probs=78.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   57 (252)
T 3h7a_A            7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLA---------------------------PLVAEIEAA--GGR   57 (252)
T ss_dssp             SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGH---------------------------HHHHHHHHT--TCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            789999999999999999999999999999999877552                           222333322  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.++ +++|+||||||+....++
T Consensus        58 ~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~   99 (252)
T 3h7a_A           58 IVARSLDARNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPI   99 (252)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCG
T ss_pred             EEEEECcCCCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCc
Confidence            899999999999999999999999 999999999999876553

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.83  E-value=7.6e-20  Score=129.26  Aligned_cols=95  Identities=33%  Similarity=0.471  Sum_probs=78.0

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch-hhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+|++||||+++|||++++++|+++|++|++++|+.. ..                           ++..+.+... .+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~-~~   75 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEI---------------------------RTVTDEVAGL-SS   75 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHH---------------------------HHHHHHHHTT-CS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHH---------------------------HHHHHHHhhc-cC
Confidence            3799999999999999999999999999999999543 22                           1111222222 23


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .++.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        76 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~  119 (281)
T 3v2h_A           76 GTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEK  119 (281)
T ss_dssp             SCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCC
T ss_pred             CcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
Confidence            47889999999999999999999999999999999999987654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.83  E-value=4.2e-20  Score=130.24  Aligned_cols=95  Identities=26%  Similarity=0.378  Sum_probs=79.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus        27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~-~~~   78 (277)
T 4fc7_A           27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVL---------------------------TAARKLAGAT-GRR   78 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH---------------------------HHHHHHHHHH-SSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHhc-CCc
Confidence            799999999999999999999999999999999876542                           1122222211 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        79 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~  121 (277)
T 4fc7_A           79 CLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPA  121 (277)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCc
Confidence            8899999999999999999999999999999999998776543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.83  E-value=7.8e-20  Score=128.97  Aligned_cols=93  Identities=31%  Similarity=0.443  Sum_probs=78.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   82 (276)
T 3r1i_A           32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQ---------------------------VVADEIAGV--GGK   82 (276)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            799999999999999999999999999999999876542                           112233222  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        83 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~  124 (276)
T 3r1i_A           83 ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA  124 (276)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCC
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999987654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.83  E-value=8.2e-20  Score=127.42  Aligned_cols=94  Identities=29%  Similarity=0.410  Sum_probs=79.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   62 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAE---------------------------AVAAAIRQA--GGK   62 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            789999999999999999999999999999999876542                           111222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        63 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~  105 (256)
T 3gaf_A           63 AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF  105 (256)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC
Confidence            8899999999999999999999999999999999999876543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.83  E-value=8.2e-20  Score=128.91  Aligned_cols=94  Identities=35%  Similarity=0.487  Sum_probs=78.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   74 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVS---------------------------AAVDGLRAA--GHD   74 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHTT--TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            789999999999999999999999999999999876542                           222333222  337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....++
T Consensus        75 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~  117 (279)
T 3sju_A           75 VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGET  117 (279)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCG
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence            8899999999999999999999999999999999999876543

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.82  E-value=3.7e-20  Score=128.64  Aligned_cols=91  Identities=32%  Similarity=0.498  Sum_probs=76.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+.     ..
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~-----~~   56 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQ---------------------------AISDYLG-----DN   56 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHHG-----GG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHhc-----cc
Confidence            789999999999999999999999999999999876541                           1112221     14


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ...+++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        57 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~   99 (248)
T 3op4_A           57 GKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLL   99 (248)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCG
T ss_pred             ceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            5678999999999999999999999999999999999876543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.82  E-value=1.3e-19  Score=125.57  Aligned_cols=96  Identities=27%  Similarity=0.396  Sum_probs=77.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|++||||+++|||++++++|+++|++|++++++.....                          ++..+.+...  +.
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~--------------------------~~~~~~~~~~--~~   54 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKA--------------------------EAVVEEIKAK--GV   54 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHHT--TS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHH--------------------------HHHHHHHHhc--CC
Confidence            4899999999999999999999999999999888543220                          1111222222  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        55 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~   98 (246)
T 3osu_A           55 DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLL   98 (246)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            68889999999999999999999999999999999999876553

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.82  E-value=3.2e-20  Score=128.89  Aligned_cols=91  Identities=33%  Similarity=0.414  Sum_probs=77.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+     +.+
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~-----~~~   53 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAK---------------------------AAAASI-----GKK   53 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH---------------------------HHHHHH-----CTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHh-----CCc
Confidence            799999999999999999999999999999999876541                           111222     236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        54 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~   96 (247)
T 3rwb_A           54 ARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAW   96 (247)
T ss_dssp             EEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence            7889999999999999999999999999999999999876543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.82  E-value=1e-19  Score=127.08  Aligned_cols=94  Identities=34%  Similarity=0.476  Sum_probs=77.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||++++++|+++|++|+++ +|+.+...                           +..+.+...  +.
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~---------------------------~~~~~~~~~--~~   54 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAAL---------------------------ETAEEIEKL--GV   54 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHTT--TC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            7899999999999999999999999999997 77765441                           111222221  33


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~   98 (258)
T 3oid_A           55 KVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPV   98 (258)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCG
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            78899999999999999999999999999999999998776543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.82  E-value=7e-20  Score=127.83  Aligned_cols=91  Identities=24%  Similarity=0.347  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+    . .+
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~----~-~~   55 (259)
T 4e6p_A            8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERAR---------------------------QAAAEI----G-PA   55 (259)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHH----C-TT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHh----C-CC
Confidence            689999999999999999999999999999999876541                           111222    1 25


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        56 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~   98 (259)
T 4e6p_A           56 AYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPI   98 (259)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCG
T ss_pred             ceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence            7889999999999999999999999999999999999876543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.82  E-value=1.8e-19  Score=125.04  Aligned_cols=94  Identities=39%  Similarity=0.548  Sum_probs=78.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   57 (247)
T 2jah_A            7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLR---------------------------ALGDELTAA--GAK   57 (247)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            789999999999999999999999999999999865441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.++++++|+||||||+....++
T Consensus        58 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~  100 (247)
T 2jah_A           58 VHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPV  100 (247)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCS
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCch
Confidence            8889999999999999999999999999999999998765543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.82  E-value=1.3e-19  Score=126.33  Aligned_cols=94  Identities=36%  Similarity=0.491  Sum_probs=77.6

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh--hhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM--IDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      |+|+++|||+++|||+++++.|+++|++|++++|+.+.  .                           .+..+.+...  
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~--   51 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQA---------------------------AETIKLIEAA--   51 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHH---------------------------HHHHHHHHTT--
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHH---------------------------HHHHHHHHhc--
Confidence            68999999999999999999999999999999998654  2                           1111222221  


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        52 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~   96 (258)
T 3a28_C           52 DQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKP   96 (258)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCC
T ss_pred             CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            236888999999999999999999999999999999999876654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.82  E-value=1.2e-19  Score=126.98  Aligned_cols=93  Identities=28%  Similarity=0.426  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.....+.+
T Consensus        13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   65 (267)
T 1iy8_A           13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLE---------------------------ASKAAVLETAPDAE   65 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHCTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhhcCCce
Confidence            789999999999999999999999999999999876442                           11122222222336


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+...
T Consensus        66 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~  105 (267)
T 1iy8_A           66 VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGK  105 (267)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence            8889999999999999999999999999999999998765

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.82  E-value=8.4e-20  Score=128.85  Aligned_cols=91  Identities=27%  Similarity=0.417  Sum_probs=77.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                               .+.... +.+
T Consensus        27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-------------------------------~~~~~~-~~~   74 (277)
T 4dqx_A           27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAV-------------------------------RVANEI-GSK   74 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-------------------------------HHHHHH-CTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------------------------HHHHHh-CCc
Confidence            799999999999999999999999999999999876441                               111111 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        75 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~  117 (277)
T 4dqx_A           75 AFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNV  117 (277)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence            7889999999999999999999999999999999999876554

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.82  E-value=6.9e-20  Score=128.95  Aligned_cols=94  Identities=24%  Similarity=0.465  Sum_probs=79.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   76 (271)
T 4ibo_A           26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVA---------------------------QTVQEFRNV--GHD   76 (271)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            799999999999999999999999999999999876542                           222333222  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.++++++|+||||||+....++
T Consensus        77 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~  119 (271)
T 4ibo_A           77 AEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPM  119 (271)
T ss_dssp             EEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCG
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence            8889999999999999999999999999999999999876553

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.82  E-value=1.1e-19  Score=130.62  Aligned_cols=96  Identities=29%  Similarity=0.494  Sum_probs=80.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+.....+.+
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   60 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSID---------------------------KALATLEAEGSGPE   60 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHTCGGG
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhcCCCCe
Confidence            689999999999999999999999999999999977552                           22233332233337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++.+.+.++++|+||||||+....++
T Consensus        61 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~  103 (319)
T 3ioy_A           61 VMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPI  103 (319)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCG
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCc
Confidence            8899999999999999999999999999999999999876553

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.82  E-value=4.9e-20  Score=128.56  Aligned_cols=91  Identities=29%  Similarity=0.432  Sum_probs=77.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+     +.+
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~-----~~~   55 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIA---------------------------RIREEF-----GPR   55 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHH-----GGG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHh-----CCc
Confidence            689999999999999999999999999999999876541                           111111     236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++.+.++++++|+||||||+....++
T Consensus        56 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~   98 (255)
T 4eso_A           56 VHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPF   98 (255)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCG
T ss_pred             ceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence            8899999999999999999999999999999999999876553

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.82  E-value=6.1e-20  Score=128.90  Aligned_cols=81  Identities=21%  Similarity=0.249  Sum_probs=71.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+....                                 +      .+
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------------------------------~------~~   51 (261)
T 4h15_A           11 GKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG---------------------------------L------PE   51 (261)
T ss_dssp             TCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------------------------S------CT
T ss_pred             CCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------------------------------C------Cc
Confidence            89999999999999999999999999999999975421                                 0      12


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ..++++|+++++++.++++++.+++|++|+||||||+...
T Consensus        52 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~   91 (261)
T 4h15_A           52 ELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSA   91 (261)
T ss_dssp             TTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCC
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCcc
Confidence            3468999999999999999999999999999999998654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.82  E-value=1.3e-19  Score=127.40  Aligned_cols=94  Identities=29%  Similarity=0.400  Sum_probs=78.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   78 (270)
T 3ftp_A           28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAE---------------------------GIGAAFKQA--GLE   78 (270)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHHHHH--TCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            789999999999999999999999999999999876542                           111222222  226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....++
T Consensus        79 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  121 (270)
T 3ftp_A           79 GRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLA  121 (270)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred             EEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            7788999999999999999999999999999999999876553

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.82  E-value=8.7e-20  Score=128.83  Aligned_cols=91  Identities=30%  Similarity=0.490  Sum_probs=77.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+     +.+
T Consensus        29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~~-----~~~   76 (277)
T 3gvc_A           29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAAD---------------------------AAATKI-----GCG   76 (277)
T ss_dssp             TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHH-----CSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHc-----CCc
Confidence            789999999999999999999999999999999876541                           111222     236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        77 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  119 (277)
T 3gvc_A           77 AAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASL  119 (277)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCT
T ss_pred             ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            7889999999999999999999999999999999999876554

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.82  E-value=8.3e-20  Score=128.22  Aligned_cols=91  Identities=24%  Similarity=0.367  Sum_probs=74.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                               .+.... +.+
T Consensus        27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------------------------~~~~~~-~~~   74 (266)
T 3grp_A           27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLK-------------------------------EIAADL-GKD   74 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-------------------------------HHHHHH-CSS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------------------------HHHHHh-CCc
Confidence            799999999999999999999999999999999876541                               111111 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.++++++|+||||||+....++
T Consensus        75 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  117 (266)
T 3grp_A           75 VFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLF  117 (266)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----
T ss_pred             eEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.82  E-value=1e-19  Score=126.82  Aligned_cols=89  Identities=34%  Similarity=0.511  Sum_probs=73.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                               ...... +.+
T Consensus         7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------------------------~~~~~~-~~~   54 (257)
T 3tpc_A            7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE-------------------------------EPAAEL-GAA   54 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------------------------------
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------------------------HHHHHh-CCc
Confidence            689999999999999999999999999999999876441                               111111 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....
T Consensus        55 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~   95 (257)
T 3tpc_A           55 VRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGE   95 (257)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            78899999999999999999999999999999999998654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.82  E-value=2.2e-19  Score=125.70  Aligned_cols=89  Identities=27%  Similarity=0.452  Sum_probs=76.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   61 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLE---------------------------DVAKQVTDT--GRR   61 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            789999999999999999999999999999999876542                           112333222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+.
T Consensus        62 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~   99 (264)
T 3ucx_A           62 ALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRV   99 (264)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSC
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence            88999999999999999999999999999999999986

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.82  E-value=1.4e-19  Score=127.00  Aligned_cols=89  Identities=35%  Similarity=0.524  Sum_probs=76.9

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|++||||+++|||++++++|+++|++|++++|+.+..                               +.+.    ..
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~----~~   59 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-------------------------------KALN----LP   59 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH-------------------------------HTTC----CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHhh----cC
Confidence            478999999999999999999999999999999986543                               1111    12


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .+.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        60 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  103 (266)
T 3p19_A           60 NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQI  103 (266)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCT
T ss_pred             CceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCc
Confidence            57789999999999999999999999999999999999876554

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.82  E-value=2.4e-19  Score=126.84  Aligned_cols=91  Identities=33%  Similarity=0.508  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+..  .+.+
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~--~~~~   78 (283)
T 3v8b_A           28 SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVE---------------------------EVADEIVG--AGGQ   78 (283)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHHTT--TTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHh--cCCc
Confidence            689999999999999999999999999999999876542                           11222322  2337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        79 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~  118 (283)
T 3v8b_A           79 AIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGV  118 (283)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            8899999999999999999999999999999999998653

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.82  E-value=2.6e-19  Score=126.16  Aligned_cols=106  Identities=25%  Similarity=0.299  Sum_probs=78.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.......               ..........+..+.+.. . +.+
T Consensus        10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~---------------~~~~~~~~~~~~~~~~~~-~-~~~   72 (281)
T 3s55_A           10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVG---------------YPLATADDLAETVALVEK-T-GRR   72 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCS---------------SCCCCHHHHHHHHHHHHH-T-TCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccc---------------cccccHHHHHHHHHHHHh-c-CCe
Confidence            78999999999999999999999999999999974321000               000000000111122222 2 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        73 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~  115 (281)
T 3s55_A           73 CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALL  115 (281)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCT
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876554

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.81  E-value=2.5e-19  Score=125.42  Aligned_cols=97  Identities=26%  Similarity=0.446  Sum_probs=78.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.......                        .+..+.+...  +.+
T Consensus        11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~------------------------~~~~~~~~~~--~~~   64 (262)
T 3ksu_A           11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTA------------------------NKLKDELEDQ--GAK   64 (262)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHH------------------------HHHHHHHHTT--TCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHH------------------------HHHHHHHHhc--CCc
Confidence            78999999999999999999999999999998865432111                        1111223222  347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        65 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  107 (262)
T 3ksu_A           65 VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPI  107 (262)
T ss_dssp             EEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCG
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8999999999999999999999999999999999999876553

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.81  E-value=2.4e-19  Score=126.39  Aligned_cols=107  Identities=25%  Similarity=0.284  Sum_probs=77.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.........              ........++..+.+..  .+.+
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~--~~~~   78 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTY--------------APASPEDLDETARLVED--QGRK   78 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCS--------------CCCCHHHHHHHHHHHHT--TTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccc--------------cccCHHHHHHHHHHHHh--cCCe
Confidence            7899999999999999999999999999999985321000000              00000000111122222  2347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        79 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~  121 (280)
T 3pgx_A           79 ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRV  121 (280)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCG
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.81  E-value=2.6e-19  Score=126.70  Aligned_cols=101  Identities=25%  Similarity=0.308  Sum_probs=79.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+.....                    .....+..+.+...  +.+
T Consensus         9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~--------------------~~~~~~~~~~~~~~--~~~   66 (285)
T 3sc4_A            9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKL--------------------PGTIYTAAKEIEEA--GGQ   66 (285)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSS--------------------CCCHHHHHHHHHHH--TSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhh--------------------hHHHHHHHHHHHhc--CCc
Confidence            78999999999999999999999999999999987632100                    00011122223222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        67 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~  109 (285)
T 3sc4_A           67 ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSI  109 (285)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCT
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.81  E-value=1.5e-19  Score=125.57  Aligned_cols=81  Identities=28%  Similarity=0.489  Sum_probs=69.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+...                                   .....+
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~-----------------------------------~~~~~~   55 (242)
T 4b79_A           11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH-----------------------------------APRHPR   55 (242)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT-----------------------------------SCCCTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh-----------------------------------hhhcCC
Confidence            899999999999999999999999999999999876441                                   111236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +..+++|++|++++.++++    ++|++|+||||||+..+
T Consensus        56 ~~~~~~Dv~~~~~v~~~~~----~~g~iDiLVNNAGi~~~   91 (242)
T 4b79_A           56 IRREELDITDSQRLQRLFE----ALPRLDVLVNNAGISRD   91 (242)
T ss_dssp             EEEEECCTTCHHHHHHHHH----HCSCCSEEEECCCCCCG
T ss_pred             eEEEEecCCCHHHHHHHHH----hcCCCCEEEECCCCCCC
Confidence            8889999999999887765    57999999999998754

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.81  E-value=2.2e-19  Score=127.95  Aligned_cols=94  Identities=24%  Similarity=0.404  Sum_probs=79.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   81 (301)
T 3tjr_A           31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALE---------------------------QAVNGLRGQ--GFD   81 (301)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999876552                           222333222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+....++
T Consensus        82 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~  124 (301)
T 3tjr_A           82 AHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPL  124 (301)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCG
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCc
Confidence            8899999999999999999999999999999999999876543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.81  E-value=2.9e-19  Score=125.97  Aligned_cols=91  Identities=21%  Similarity=0.341  Sum_probs=76.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcC-CCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKEN-PDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   80 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+.... ...
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   63 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLA---------------------------GAVQELEALGANGG   63 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHTTCCSSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHhCCCCc
Confidence            799999999999999999999999999999999876542                           1123332221 123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+.
T Consensus        64 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~  102 (281)
T 3svt_A           64 AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGS  102 (281)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            788999999999999999999999999999999999983

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.81  E-value=1.3e-19  Score=128.08  Aligned_cols=92  Identities=29%  Similarity=0.483  Sum_probs=75.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+....                           ..+.+.... +..
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~-~~~   84 (281)
T 4dry_A           33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDA---------------------------AAGEIGGRT-GNI   84 (281)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------------------------HHHHHHHHH-SSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------------------------HHHHHHhcC-CCe
Confidence            7899999999999999999999999999999998765421                           112222221 224


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        85 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~  124 (281)
T 4dry_A           85 VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVP  124 (281)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            5889999999999999999999999999999999998754

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.81  E-value=2.8e-19  Score=123.64  Aligned_cols=93  Identities=30%  Similarity=0.463  Sum_probs=78.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   55 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAE---------------------------KFENSMKEK--GFK   55 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            799999999999999999999999999999999876542                           111222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~   97 (247)
T 3lyl_A           56 ARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNL   97 (247)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCC
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence            889999999999999999999999999999999999987654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.81  E-value=9.3e-20  Score=126.95  Aligned_cols=89  Identities=30%  Similarity=0.412  Sum_probs=74.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      |||++||||+++|||++++++|+++|  +.|++++|+.+...                               .+.... 
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~-------------------------------~~~~~~-   48 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLK-------------------------------KLKEKY-   48 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHH-------------------------------HHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHH-------------------------------HHHHHh-
Confidence            89999999999999999999999985  78988999876441                               111111 


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        49 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~   91 (254)
T 3kzv_A           49 GDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEP   91 (254)
T ss_dssp             GGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCC
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCC
Confidence            2368889999999999999999999999999999999998643

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.81  E-value=1e-19  Score=128.19  Aligned_cols=88  Identities=35%  Similarity=0.454  Sum_probs=75.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+    . .+
T Consensus        28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~~----~-~~   75 (272)
T 4dyv_A           28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQ---------------------------ETAAEI----G-DD   75 (272)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHH----T-SC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHh----C-CC
Confidence            789999999999999999999999999999999876541                           111222    1 26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        76 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~  115 (272)
T 4dyv_A           76 ALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAP  115 (272)
T ss_dssp             CEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            7889999999999999999999999999999999999754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.81  E-value=2.7e-19  Score=125.96  Aligned_cols=107  Identities=19%  Similarity=0.244  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.......              ...........+..+.+...  +.+
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~--~~~   74 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCV--------------PYDPASPDDLSETVRLVEAA--NRR   74 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTC--------------CSCCCCHHHHHHHHHHHHHT--TCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccc--------------cccccCHHHHHHHHHHHHhc--CCe
Confidence            78999999999999999999999999999999852210000              00000000001111222221  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....++
T Consensus        75 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~  117 (277)
T 3tsc_A           75 IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAW  117 (277)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            8899999999999999999999999999999999999876553

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.81  E-value=2.5e-19  Score=125.79  Aligned_cols=95  Identities=27%  Similarity=0.451  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++++.....                          ++..+.+...  +.+
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~--------------------------~~~~~~~~~~--~~~   69 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDA--------------------------EKVVSEIKAL--GSD   69 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHHT--TCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH--------------------------HHHHHHHHhc--CCc
Confidence            799999999999999999999999999999877644221                          1111222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        70 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~  112 (270)
T 3is3_A           70 AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHL  112 (270)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCG
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.81  E-value=3.1e-19  Score=125.59  Aligned_cols=95  Identities=26%  Similarity=0.370  Sum_probs=77.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++++.....                          +...+.+...  +.+
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~--------------------------~~~~~~l~~~--~~~   82 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERA--------------------------QAVVSEIEQA--GGR   82 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH--------------------------HHHHHHHHhc--CCc
Confidence            789999999999999999999999999999977653221                          1111222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....++
T Consensus        83 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  125 (271)
T 3v2g_A           83 AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPL  125 (271)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence            8899999999999999999999999999999999999876553

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.81  E-value=2.8e-19  Score=125.82  Aligned_cols=101  Identities=28%  Similarity=0.278  Sum_probs=79.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+......                    ....+..+.+...  +.+
T Consensus         6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--------------------~~~~~~~~~~~~~--~~~   63 (274)
T 3e03_A            6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLP--------------------GTIHSAAAAVNAA--GGQ   63 (274)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSC--------------------CCHHHHHHHHHHH--TSE
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhH--------------------HHHHHHHHHHHhc--CCe
Confidence            799999999999999999999999999999999875421000                    0001111222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        64 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~  106 (274)
T 3e03_A           64 GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGT  106 (274)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCc
Confidence            8899999999999999999999999999999999999876543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.81  E-value=2.3e-19  Score=126.76  Aligned_cols=88  Identities=24%  Similarity=0.406  Sum_probs=76.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+..                               +.+.... +.+
T Consensus         5 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-------------------------------~~~~~~~-~~~   52 (281)
T 3zv4_A            5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERL-------------------------------RELEVAH-GGN   52 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHT-BTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH-------------------------------HHHHHHc-CCc
Confidence            79999999999999999999999999999999987654                               1222222 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+...
T Consensus        53 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~   92 (281)
T 3zv4_A           53 AVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDY   92 (281)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCT
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcc
Confidence            8889999999999999999999999999999999998654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.81  E-value=2.5e-19  Score=127.02  Aligned_cols=91  Identities=32%  Similarity=0.484  Sum_probs=77.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~-~~~   63 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGH---------------------------EAVEKLKNSN-HEN   63 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHTTT-CCS
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhcC-CCc
Confidence            789999999999999999999999999999999977542                           2223343332 237


Q ss_pred             eeEEEecCCCh-HHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKD-AEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|+ +++.++++.+.++++++|+||||||+..
T Consensus        64 ~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~  103 (311)
T 3o26_A           64 VVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAG  103 (311)
T ss_dssp             EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCS
T ss_pred             eEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccc
Confidence            88999999998 9999999999999999999999999975

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.81  E-value=3.6e-19  Score=123.52  Aligned_cols=89  Identities=30%  Similarity=0.390  Sum_probs=76.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   59 (253)
T 3qiv_A            9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAE---------------------------AVAKQIVAD--GGT   59 (253)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            799999999999999999999999999999999876542                           112333222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+.
T Consensus        60 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~   97 (253)
T 3qiv_A           60 AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIF   97 (253)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence            88999999999999999999999999999999999984

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.81  E-value=3e-19  Score=125.53  Aligned_cols=94  Identities=34%  Similarity=0.477  Sum_probs=76.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.....                          ++..+.+...  +.+
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~--------------------------~~~~~~~~~~--~~~   79 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAA--------------------------DEVVAAIAAA--GGE   79 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHHT--TCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHH--------------------------HHHHHHHHhc--CCc
Confidence            789999999999999999999999999999998543220                          1111222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        80 ~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~  121 (269)
T 4dmm_A           80 AFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTL  121 (269)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            889999999999999999999999999999999999987654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.81  E-value=2.5e-19  Score=125.73  Aligned_cols=94  Identities=29%  Similarity=0.497  Sum_probs=77.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           ...+.+.... +.+
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~-~~~   72 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS---------------------------EAAQKLTEKY-GVE   72 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHH-CCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHhc-CCe
Confidence            799999999999999999999999999999999876441                           1112221111 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....+
T Consensus        73 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~  114 (267)
T 1vl8_A           73 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP  114 (267)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            788999999999999999999999999999999999876544

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.81  E-value=3.4e-19  Score=124.46  Aligned_cols=95  Identities=28%  Similarity=0.487  Sum_probs=77.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~-~~~   58 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLH---------------------------EAARSLKEKF-GVR   58 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHH-CCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH---------------------------HHHHHHHHhc-CCc
Confidence            689999999999999999999999999999999875441                           1112222111 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.++++++|+||||||+....++
T Consensus        59 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~  101 (263)
T 3ai3_A           59 VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETI  101 (263)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCT
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            7889999999999999999999999999999999998765543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.81  E-value=2.9e-19  Score=125.50  Aligned_cols=94  Identities=33%  Similarity=0.471  Sum_probs=76.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch-hhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||++++++|+++|++|++++++.. ...                           ...+.+...  +.
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~---------------------------~~~~~~~~~--~~   77 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAE---------------------------EVAGKIEAA--GG   77 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHH---------------------------HHHHHHHHT--TC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            789999999999999999999999999999855433 221                           111222221  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        78 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~  121 (267)
T 3u5t_A           78 KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTI  121 (267)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCG
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            78889999999999999999999999999999999999876543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.81  E-value=2.3e-19  Score=126.26  Aligned_cols=90  Identities=36%  Similarity=0.562  Sum_probs=77.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+..                               +.+..... .+
T Consensus         5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~-~~   52 (281)
T 3m1a_A            5 AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL-------------------------------DDLVAAYP-DR   52 (281)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG-------------------------------HHHHHHCT-TT
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHhcc-CC
Confidence            78999999999999999999999999999999987654                               22222222 26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        53 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~   94 (281)
T 3m1a_A           53 AEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGA   94 (281)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECC
T ss_pred             ceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCC
Confidence            888999999999999999999999999999999999876544

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.81  E-value=1.5e-19  Score=128.17  Aligned_cols=92  Identities=32%  Similarity=0.505  Sum_probs=78.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC---eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH---QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      +|++||||+++|||++++++|+++|+   +|++++|+.+...                           +..+.+.....
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~   85 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLE---------------------------ELKKTIDQEFP   85 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHH---------------------------HHHHHHHHHCT
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHH---------------------------HHHHHHHhhCC
Confidence            79999999999999999999999998   9999999876552                           22233333333


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.++++|++|++++.++++++.+++|++|+||||||+..
T Consensus        86 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~  127 (287)
T 3rku_A           86 NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKAL  127 (287)
T ss_dssp             TCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCC
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            457899999999999999999999999999999999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.81  E-value=4.7e-19  Score=124.60  Aligned_cols=104  Identities=20%  Similarity=0.305  Sum_probs=76.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+......               .........+..+.+...  +.+
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~--~~~   75 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPY---------------PLATPEELAATVKLVEDI--GSR   75 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSS---------------CCCCHHHHHHHHHHHHHH--TCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccc---------------cccchHHHHHHHHHHHhc--CCe
Confidence            789999999999999999999999999999998732110000               000000001111222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....
T Consensus        76 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~  116 (278)
T 3sx2_A           76 IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMS  116 (278)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCS
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            88999999999999999999999999999999999987654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.80  E-value=4.8e-19  Score=123.77  Aligned_cols=94  Identities=29%  Similarity=0.382  Sum_probs=79.1

Q ss_pred             CcEEEEecCC-cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGAS-VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||++ +|||++++++|+++|++|++++|+.+...                           +..+.+... ...
T Consensus        22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~-~~~   73 (266)
T 3o38_A           22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLG---------------------------ETRDQLADL-GLG   73 (266)
T ss_dssp             TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHTT-CSS
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHH---------------------------HHHHHHHhc-CCC
Confidence            7899999997 59999999999999999999999876542                           222333222 234


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|++|++++.++++++.++++++|+||||||+....+
T Consensus        74 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~  116 (266)
T 3o38_A           74 RVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP  116 (266)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             ceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCC
Confidence            7899999999999999999999999999999999999987654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=3.7e-19  Score=124.64  Aligned_cols=90  Identities=27%  Similarity=0.364  Sum_probs=76.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+..... .+
T Consensus         6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~-~~   53 (263)
T 2a4k_A            6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLL-------------------------------AEAVAALE-AE   53 (263)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHTCC-SS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHhc-Cc
Confidence            68999999999999999999999999999999987644                               22222222 36


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        54 ~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~   95 (263)
T 2a4k_A           54 AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSAL   95 (263)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876544

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.80  E-value=2.3e-19  Score=126.86  Aligned_cols=90  Identities=33%  Similarity=0.423  Sum_probs=76.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+..  .+.+
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~--~~~~   58 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALA---------------------------ELTDEIAG--GGGE   58 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHH---------------------------HHHHHHTT--TTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHh--cCCc
Confidence            789999999999999999999999999999999876542                           11222222  2347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++.+.+++|++|+||||||+..
T Consensus        59 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~   97 (280)
T 3tox_A           59 AAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALG   97 (280)
T ss_dssp             EEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            888999999999999999999999999999999999874

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.80  E-value=6.3e-19  Score=125.47  Aligned_cols=105  Identities=20%  Similarity=0.242  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+......               .........+..+.+...  +.+
T Consensus        28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~--~~~   90 (299)
T 3t7c_A           28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKL---------------PMSTPDDLAETVRQVEAL--GRR   90 (299)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCS---------------CCCCHHHHHHHHHHHHHT--TCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccc---------------cccCHHHHHHHHHHHHhc--CCc
Confidence            789999999999999999999999999999998742110000               000000001112222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        91 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~  132 (299)
T 3t7c_A           91 IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGT  132 (299)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            889999999999999999999999999999999999887643

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.80  E-value=3.1e-19  Score=124.50  Aligned_cols=90  Identities=26%  Similarity=0.371  Sum_probs=73.9

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||++++++|+++|++|++++|+.+...                           +......... +.
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---------------------------~~~~~~~~~~-~~   57 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAM---------------------------ETMKETYKDV-EE   57 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH---------------------------HHHHHHTGGG-GG
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHH---------------------------HHHHHHHHhc-CC
Confidence            3799999999999999999999999999999988765331                           1111111111 23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCccc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV  118 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~  118 (125)
                      ++.++++|++|++++.++++++.++++++|+||||||+
T Consensus        58 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~   95 (264)
T 3i4f_A           58 RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGP   95 (264)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCC
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            78899999999999999999999999999999999994

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.80  E-value=6.6e-19  Score=124.98  Aligned_cols=92  Identities=18%  Similarity=0.239  Sum_probs=76.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                           +......... +.+
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~-~~~   98 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDA---------------------------NETKQYVEKE-GVK   98 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH---------------------------HHHHHHHHTT-TCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH---------------------------HHHHHHHHhc-CCc
Confidence            789999999999999999999999999999999875331                           1112221222 337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        99 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~  138 (291)
T 3ijr_A           99 CVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYP  138 (291)
T ss_dssp             EEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCC
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCC
Confidence            8899999999999999999999999999999999998753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.80  E-value=4.2e-19  Score=124.09  Aligned_cols=91  Identities=30%  Similarity=0.439  Sum_probs=76.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+    .. +
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~----~~-~   54 (260)
T 1nff_A            7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGK---------------------------AMAAEL----AD-A   54 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHT----GG-G
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHh----hc-C
Confidence            689999999999999999999999999999999875441                           111111    11 4


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        55 ~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~   97 (260)
T 1nff_A           55 ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI   97 (260)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred             ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            6788999999999999999999999999999999998866543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.80  E-value=6e-19  Score=126.60  Aligned_cols=106  Identities=21%  Similarity=0.316  Sum_probs=77.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.......               ..........+..+.+...  +.+
T Consensus        46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~  108 (317)
T 3oec_A           46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLD---------------YAQGSPEELKETVRLVEEQ--GRR  108 (317)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCC---------------SCCCCHHHHHHHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEeccccccccc---------------ccccCHHHHHHHHHHHHhc--CCe
Confidence            78999999999999999999999999999998863211000               0000000001111222222  337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus       109 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~  151 (317)
T 3oec_A          109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEV  151 (317)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.80  E-value=6.6e-19  Score=124.38  Aligned_cols=108  Identities=22%  Similarity=0.258  Sum_probs=76.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.........           ............+..+.+..  .+.+
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~--~~~~   77 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVD-----------TAIPASTPEDLAETADLVKG--HNRR   77 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCC-----------CSSCCCCHHHHHHHHHHHHT--TTCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccc-----------cccccCCHHHHHHHHHHHhh--cCCc
Confidence            7999999999999999999999999999999987321100000           00000000000111122221  2347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....
T Consensus        78 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~  118 (286)
T 3uve_A           78 IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG  118 (286)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC
Confidence            88999999999999999999999999999999999987654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.80  E-value=6.4e-19  Score=123.08  Aligned_cols=89  Identities=31%  Similarity=0.358  Sum_probs=73.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC-chhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR-AEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||++++++|+++|++|++++++ .+..                           ....+.+...  +.
T Consensus         8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~---------------------------~~~~~~~~~~--~~   58 (259)
T 3edm_A            8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGA---------------------------ATAVAEIEKL--GR   58 (259)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHH---------------------------HHHHHHHHTT--TS
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH---------------------------HHHHHHHHhc--CC
Confidence            7899999999999999999999999999998554 3332                           1111222222  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+.
T Consensus        59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~   97 (259)
T 3edm_A           59 SALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGL   97 (259)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcc
Confidence            678899999999999999999999999999999999987

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.80  E-value=5.1e-19  Score=122.81  Aligned_cols=90  Identities=28%  Similarity=0.434  Sum_probs=76.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc-hhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA-EMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+. +...                           +   .+.. . +.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------------------------~---~~~~-~-~~   54 (249)
T 2ew8_A            7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE---------------------------A---AIRN-L-GR   54 (249)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH---------------------------H---HHHH-T-TC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHH---------------------------H---HHHh-c-CC
Confidence            78999999999999999999999999999999987 4331                           1   1111 1 23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|++|++++.++++++.++++++|+||||||+....+
T Consensus        55 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~   97 (249)
T 2ew8_A           55 RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP   97 (249)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             cEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            6888999999999999999999999999999999999876544

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.80  E-value=5.4e-19  Score=122.42  Aligned_cols=93  Identities=31%  Similarity=0.463  Sum_probs=76.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec-CchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR-RAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||++++++|+++|++|++++| +.+...                           +..+.+...  +.
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~--~~   54 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKAN---------------------------EVVDEIKKL--GS   54 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHHT--TC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            789999999999999999999999999999999 544331                           111222221  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|++|++++.++++++.++++++|+||||||+....+
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~   97 (246)
T 2uvd_A           55 DAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNL   97 (246)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            6788999999999999999999999999999999999876543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.80  E-value=7.6e-19  Score=122.56  Aligned_cols=93  Identities=27%  Similarity=0.479  Sum_probs=77.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   59 (260)
T 2ae2_A            9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN---------------------------DCLTQWRSK--GFK   59 (260)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            789999999999999999999999999999999876441                           111222221  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhc-CCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+++ +++|+||||||+....+
T Consensus        60 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~  102 (260)
T 2ae2_A           60 VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKE  102 (260)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCC
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCC
Confidence            8889999999999999999999999 89999999999876543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.80  E-value=4.1e-19  Score=123.69  Aligned_cols=90  Identities=27%  Similarity=0.349  Sum_probs=76.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+..                               +.+.... +.+
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~-~~~   52 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG-------------------------------AATAREL-GDA   52 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHTT-GGG
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHh-CCc
Confidence            78999999999999999999999999999999986544                               1111111 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....+
T Consensus        53 ~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~   94 (254)
T 1hdc_A           53 ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF   94 (254)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSC
T ss_pred             eeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.80  E-value=9.8e-19  Score=122.90  Aligned_cols=94  Identities=28%  Similarity=0.428  Sum_probs=77.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   71 (273)
T 1ae1_A           21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD---------------------------ECLEIWREK--GLN   71 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999876441                           111222222  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhc-CCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++.+.+.+ +++|+||||||+....++
T Consensus        72 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~  115 (273)
T 1ae1_A           72 VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEA  115 (273)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCT
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCCh
Confidence            7889999999999999999999999 999999999999765543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.80  E-value=6.5e-19  Score=122.53  Aligned_cols=91  Identities=25%  Similarity=0.350  Sum_probs=75.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+....                           ..+.+.... ..+
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~-~~~   63 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQ---------------------------VASHINEET-GRQ   63 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------------------------HHHHHHHHH-SCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------------------------HHHHHHhhc-CCC
Confidence            7899999999999999999999999999999998765521                           112222211 125


Q ss_pred             eeEEEecC--CChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDV--TKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv--~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+  +|++++.++++++.+++|++|+||||||+..
T Consensus        64 ~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~  104 (252)
T 3f1l_A           64 PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLG  104 (252)
T ss_dssp             CEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred             ceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCC
Confidence            67889999  9999999999999999999999999999864

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.80  E-value=6.4e-19  Score=123.71  Aligned_cols=95  Identities=22%  Similarity=0.285  Sum_probs=77.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec-CchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR-RAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||+++++.|+++|++|++++| +.+...                           +..+.+.... +.
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~-~~   62 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQ---------------------------RLVAELNAAR-AG   62 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHHHS-TT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHH---------------------------HHHHHHHHhc-CC
Confidence            689999999999999999999999999999999 655431                           1112222211 23


Q ss_pred             eeeEEEecCCCh----HHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKD----AEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~----~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++.+|++|+    +++.++++++.+++|++|+||||||+....++
T Consensus        63 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~  110 (276)
T 1mxh_A           63 SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPL  110 (276)
T ss_dssp             CEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCS
T ss_pred             ceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCc
Confidence            678899999999    99999999999999999999999998766543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.80  E-value=5.1e-19  Score=123.52  Aligned_cols=90  Identities=34%  Similarity=0.410  Sum_probs=75.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+..                               +.+...... +
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~~-~   59 (263)
T 3ak4_A           12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAA-------------------------------QAVVAGLEN-G   59 (263)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHTCTT-C
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHHhc-C
Confidence            68999999999999999999999999999999986544                               111111211 5


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        60 ~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~  101 (263)
T 3ak4_A           60 GFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRP  101 (263)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCC
T ss_pred             CeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            678899999999999999999999999999999999876544

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.80  E-value=3.7e-19  Score=123.97  Aligned_cols=87  Identities=29%  Similarity=0.487  Sum_probs=75.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                               .+.... +.+
T Consensus         9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------------------------~~~~~~-~~~   56 (261)
T 3n74_A            9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAE-------------------------------RVAGEI-GDA   56 (261)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-------------------------------HHHHHH-CTT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHH-------------------------------HHHHHh-CCc
Confidence            789999999999999999999999999999999876541                               111111 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+..
T Consensus        57 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~   95 (261)
T 3n74_A           57 ALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGH   95 (261)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            788999999999999999999999999999999999876

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.80  E-value=7.1e-19  Score=122.90  Aligned_cols=89  Identities=33%  Similarity=0.435  Sum_probs=76.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   79 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLR---------------------------AVEREIVAA--GGE   79 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHHh--CCc
Confidence            689999999999999999999999999999999876542                           122333222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|++|++++.++++.+.+.+|++|+||||||+.
T Consensus        80 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~  117 (262)
T 3rkr_A           80 AESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVG  117 (262)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred             eeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCcc
Confidence            88999999999999999999999999999999999984

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.80  E-value=3.4e-19  Score=123.94  Aligned_cols=91  Identities=20%  Similarity=0.349  Sum_probs=76.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+     +.+
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~-----~~~   53 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQ---------------------------QLAAEL-----GER   53 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH---------------------------HHHHHH-----CTT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHc-----CCc
Confidence            789999999999999999999999999999999865441                           111122     226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++.+.++++++|+||||||+....++
T Consensus        54 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~   96 (253)
T 1hxh_A           54 SMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDM   96 (253)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCT
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            7889999999999999999999999999999999999766543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.80  E-value=5.6e-19  Score=122.42  Aligned_cols=88  Identities=25%  Similarity=0.383  Sum_probs=74.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+.... +  
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~-~--   50 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL-------------------------------REAAEAV-G--   50 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHTT-T--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHc-C--
Confidence            78999999999999999999999999999999986544                               1221121 1  


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....+
T Consensus        51 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~   92 (245)
T 1uls_A           51 AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNF   92 (245)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            567899999999999999999999999999999999876543

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.80  E-value=4.1e-19  Score=123.92  Aligned_cols=94  Identities=32%  Similarity=0.434  Sum_probs=77.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh-hhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM-IDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+. ..                           +..+.+.... +.
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~-~~   55 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIE---------------------------KVRAGLAAQH-GV   55 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHH---------------------------HHHHHHHHHH-TS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHH---------------------------HHHHHHHhcc-CC
Confidence            7999999999999999999999999999999998764 31                           1112221111 12


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        56 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~   98 (260)
T 1x1t_A           56 KVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL   98 (260)
T ss_dssp             CEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCC
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            6788899999999999999999999999999999999876544

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.80  E-value=7.4e-19  Score=123.36  Aligned_cols=94  Identities=29%  Similarity=0.415  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.....                          +...+.+.. . +.+
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------------------~~~~~~~~~-~-~~~   80 (271)
T 4iin_A           29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVA--------------------------DALKNELEE-K-GYK   80 (271)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHH-T-TCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH--------------------------HHHHHHHHh-c-CCc
Confidence            789999999999999999999999999999999654321                          111122222 1 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+.++++|+||||||+....+
T Consensus        81 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~  122 (271)
T 4iin_A           81 AAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKL  122 (271)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcc
Confidence            889999999999999999999999999999999999987654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.80  E-value=7.4e-19  Score=121.43  Aligned_cols=94  Identities=34%  Similarity=0.483  Sum_probs=77.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+.... +.
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~-~~   52 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLE---------------------------ETARTHWHAY-AD   52 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHSTTT-GG
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHhc-CC
Confidence            7899999999999999999999999999999999865441                           1112221111 23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++.+|++|++++.++++++.++++++|+||||||+....
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~   94 (250)
T 2cfc_A           53 KVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNS   94 (250)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCT
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence            688899999999999999999999999999999999987654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.80  E-value=8.6e-19  Score=122.47  Aligned_cols=89  Identities=29%  Similarity=0.430  Sum_probs=75.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   57 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALE---------------------------KAEASVREK--GVE   57 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHTT--TSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            789999999999999999999999999999999875441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+.
T Consensus        58 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~   95 (262)
T 1zem_A           58 ARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQ   95 (262)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            88899999999999999999999999999999999987

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.80  E-value=9.1e-19  Score=122.15  Aligned_cols=94  Identities=22%  Similarity=0.316  Sum_probs=76.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.....+.+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   59 (260)
T 2z1n_A            7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLE---------------------------AAASRIASLVSGAQ   59 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHSTTCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhcCCCCe
Confidence            689999999999999999999999999999999876441                           11122221111226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+++| +|+||||||+....+
T Consensus        60 ~~~~~~D~~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~~~~  100 (260)
T 2z1n_A           60 VDIVAGDIREPGDIDRLFEKARDLGG-ADILVYSTGGPRPGR  100 (260)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHTTC-CSEEEECCCCCCCBC
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHhcC-CCEEEECCCCCCCCC
Confidence            78899999999999999999999999 999999999876544

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.80  E-value=9.2e-19  Score=123.34  Aligned_cols=103  Identities=25%  Similarity=0.316  Sum_probs=75.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.......               .........++....+...  +.+
T Consensus        10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~--~~~   72 (287)
T 3pxx_A           10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNE---------------YPLATSRDLEEAGLEVEKT--GRK   72 (287)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSC---------------SCCCCHHHHHHHHHHHHHT--TSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccc---------------cchhhhHHHHHHHHHHHhc--CCc
Confidence            78999999999999999999999999999999973211000               0000000001111222221  337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        73 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~  112 (287)
T 3pxx_A           73 AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPL  112 (287)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcc
Confidence            8899999999999999999999999999999999998764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.80  E-value=5.4e-19  Score=126.94  Aligned_cols=104  Identities=23%  Similarity=0.288  Sum_probs=77.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+......                 .........+..+.+...  +.+
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~-----------------~~~~~~~~~~~~~~~~~~--~~~   87 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGS-----------------PASGGSAAQSVVDEITAA--GGE   87 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSS-----------------BTCTTSHHHHHHHHHHHT--TCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCccccccc-----------------ccccHHHHHHHHHHHHhc--CCc
Confidence            7899999999999999999999999999999987210000                 000000011222333222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....++
T Consensus        88 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~  130 (322)
T 3qlj_A           88 AVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMI  130 (322)
T ss_dssp             EEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCG
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.79  E-value=5.3e-19  Score=123.69  Aligned_cols=84  Identities=33%  Similarity=0.495  Sum_probs=75.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+..                                      ...+
T Consensus        28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------------------------------~~~~   69 (260)
T 3un1_A           28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS--------------------------------------ADPD   69 (260)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC--------------------------------------SSTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------------------------------------ccCc
Confidence            78999999999999999999999999999999986532                                      1115


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        70 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~  111 (260)
T 3un1_A           70 IHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKP  111 (260)
T ss_dssp             EEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999987654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.79  E-value=1.1e-18  Score=122.98  Aligned_cols=93  Identities=28%  Similarity=0.416  Sum_probs=77.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   72 (277)
T 2rhc_B           22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR---------------------------TTLKELREA--GVE   72 (277)
T ss_dssp             SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999876441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        73 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~  114 (277)
T 2rhc_B           73 ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA  114 (277)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.79  E-value=1e-18  Score=127.00  Aligned_cols=101  Identities=26%  Similarity=0.311  Sum_probs=79.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+..+..                    .....+..+.+...  +.+
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l--------------------~~~l~~~~~~~~~~--g~~  102 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKL--------------------LGTIYTAAEEIEAV--GGK  102 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSS--------------------CCCHHHHHHHHHHT--TCE
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhh--------------------HHHHHHHHHHHHhc--CCe
Confidence            78999999999999999999999999999999987643100                    00001112233222  337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....++
T Consensus       103 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~  145 (346)
T 3kvo_A          103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNT  145 (346)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            8899999999999999999999999999999999999876554

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.79  E-value=6.9e-19  Score=124.82  Aligned_cols=95  Identities=23%  Similarity=0.298  Sum_probs=78.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEee-cCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFA-RRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||+++++.|+++|++|++++ |+.+...                           +..+.+.... +.
T Consensus         9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~---------------------------~~~~~l~~~~-~~   60 (291)
T 1e7w_A            9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN---------------------------ALSATLNARR-PN   60 (291)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHHHS-TT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHH---------------------------HHHHHHhhhc-CC
Confidence            78999999999999999999999999999999 8765441                           1112222112 23


Q ss_pred             eeeEEEecCCChH-----------------HHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDA-----------------EVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~-----------------~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++++|++|++                 ++.++++++.+++|++|+||||||+....++
T Consensus        61 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~  121 (291)
T 1e7w_A           61 SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL  121 (291)
T ss_dssp             CEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCC
T ss_pred             eeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCh
Confidence            6888999999999                 9999999999999999999999999876543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.79  E-value=5e-19  Score=124.33  Aligned_cols=87  Identities=26%  Similarity=0.379  Sum_probs=75.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+     +.+
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~-----~~~   58 (271)
T 3tzq_B           11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLA---------------------------GAAASV-----GRG   58 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHH---------------------------HHHHHH-----CTT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHH---------------------------HHHHHh-----CCC
Confidence            789999999999999999999999999999999876541                           111222     226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+..
T Consensus        59 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~   97 (271)
T 3tzq_B           59 AVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSD   97 (271)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            778899999999999999999999999999999999874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=7.9e-19  Score=122.81  Aligned_cols=93  Identities=31%  Similarity=0.437  Sum_probs=76.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.....+.+
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   59 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGV---------------------------QCKAALHEQFEPQK   59 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHTTTSCGGG
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhhcCCCc
Confidence            689999999999999999999999999999999875431                           11122222222336


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|++++.++++.+.++++++|+||||||+...
T Consensus        60 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~   99 (267)
T 2gdz_A           60 TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE   99 (267)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCS
T ss_pred             eEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCh
Confidence            7889999999999999999999999999999999998653

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.79  E-value=1e-18  Score=123.58  Aligned_cols=95  Identities=29%  Similarity=0.335  Sum_probs=77.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc-hhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA-EMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+. +...                           +..+.+.... +.
T Consensus        23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~---------------------------~~~~~l~~~~-~~   74 (288)
T 2x9g_A           23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAV---------------------------SLADELNKER-SN   74 (288)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHH---------------------------HHHHHHHHHS-TT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHH---------------------------HHHHHHHhhc-CC
Confidence            78999999999999999999999999999999987 4331                           1112222111 23


Q ss_pred             eeeEEEecCCC----hHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTK----DAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~----~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++++|++|    ++++.++++++.++++++|+||||||+....++
T Consensus        75 ~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~  122 (288)
T 2x9g_A           75 TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPL  122 (288)
T ss_dssp             CEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCS
T ss_pred             ceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCcc
Confidence            68889999999    999999999999999999999999999765543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.79  E-value=1.2e-18  Score=122.18  Aligned_cols=95  Identities=26%  Similarity=0.314  Sum_probs=76.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++++.....                          ......+..  .+.+
T Consensus        25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~~~~~--~~~~   76 (269)
T 3gk3_A           25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHV--------------------------STWLMHERD--AGRD   76 (269)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHH--------------------------HHHHHHHHT--TTCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHH--------------------------HHHHHHHHh--cCCc
Confidence            789999999999999999999999999999985543221                          111122221  2337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+....++
T Consensus        77 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~  119 (269)
T 3gk3_A           77 FKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATF  119 (269)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCT
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcch
Confidence            8899999999999999999999999999999999999876553

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.79  E-value=9e-19  Score=123.46  Aligned_cols=92  Identities=26%  Similarity=0.365  Sum_probs=76.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+..  .+ +
T Consensus        29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~--~~-~   78 (276)
T 2b4q_A           29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACA---------------------------DTATRLSA--YG-D   78 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH---------------------------HHHHHHTT--SS-C
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHh--cC-c
Confidence            789999999999999999999999999999999876441                           11122221  12 6


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        79 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~  120 (276)
T 2b4q_A           79 CQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAA  120 (276)
T ss_dssp             EEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCC
T ss_pred             eEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            778899999999999999999999999999999999876654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.79  E-value=1.9e-18  Score=121.54  Aligned_cols=95  Identities=31%  Similarity=0.501  Sum_probs=77.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.......+
T Consensus        32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   84 (279)
T 1xg5_A           32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE---------------------------ELAAECKSAGYPGT   84 (279)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHTTCSSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHH---------------------------HHHHHHHhcCCCce
Confidence            689999999999999999999999999999999875441                           11122222222236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+.++++|+||||||+....+
T Consensus        85 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~  126 (279)
T 1xg5_A           85 LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDT  126 (279)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCC
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCC
Confidence            888999999999999999999999999999999999876554

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=1.2e-18  Score=122.85  Aligned_cols=95  Identities=29%  Similarity=0.413  Sum_probs=77.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC-Cc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP-DW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   80 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+..... ..
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   58 (280)
T 1xkq_A            6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLE---------------------------ETRQIILKSGVSEK   58 (280)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHTTTCCGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHcCCCCc
Confidence            789999999999999999999999999999999876441                           11122221111 11


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|++++.++++++.+++|++|+||||||+....+
T Consensus        59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~  101 (280)
T 1xkq_A           59 QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDA  101 (280)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCT
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            6788999999999999999999999999999999999876543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.79  E-value=7.7e-19  Score=124.02  Aligned_cols=89  Identities=30%  Similarity=0.431  Sum_probs=72.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch-hhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.. ..                           ++..+.+...  +.
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~---------------------------~~~~~~~~~~--~~   79 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGV---------------------------APVIAELSGL--GA   79 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHH---------------------------HHHHHHHHHT--TC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHH---------------------------HHHHHHHHhc--CC
Confidence            689999999999999999999999999999997433 22                           1112222222  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+.
T Consensus        80 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~  118 (280)
T 4da9_A           80 RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIA  118 (280)
T ss_dssp             CEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC--
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc
Confidence            788999999999999999999999999999999999984

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=9.9e-19  Score=122.87  Aligned_cols=95  Identities=33%  Similarity=0.431  Sum_probs=73.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh-cCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK-ENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   80 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+.. ...+.
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   58 (278)
T 1spx_A            6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLE---------------------------ETRQQILAAGVSEQ   58 (278)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHTTCCGG
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhcccCCC
Confidence            789999999999999999999999999999999876441                           11122210 11123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+....+
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~  101 (278)
T 1spx_A           59 NVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDS  101 (278)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC------
T ss_pred             ceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcc
Confidence            6788999999999999999999999999999999999876543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.79  E-value=6.2e-19  Score=123.87  Aligned_cols=84  Identities=36%  Similarity=0.642  Sum_probs=73.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+..                                      .. .
T Consensus        14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--------------------------------------~~-~   54 (269)
T 3vtz_A           14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD--------------------------------------VN-V   54 (269)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C--------------------------------------TT-S
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc--------------------------------------cC-c
Confidence            79999999999999999999999999999999976522                                      11 4


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +..+++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        55 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~   97 (269)
T 3vtz_A           55 SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPL   97 (269)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             eeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence            5678999999999999999999999999999999999876543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.79  E-value=1.4e-18  Score=121.66  Aligned_cols=94  Identities=32%  Similarity=0.375  Sum_probs=76.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEee-cCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFA-RRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+|++||||+++|||++++++|+++|++|++.. |+.+..                           .+..+.+...  +
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~---------------------------~~~~~~l~~~--~   75 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGA---------------------------QETLNAIVAN--G   75 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH---------------------------HHHHHHHHHT--T
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHH---------------------------HHHHHHHHhc--C
Confidence            479999999999999999999999999997755 444333                           1222333322  2


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .++.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        76 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~  119 (267)
T 4iiu_A           76 GNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAA  119 (267)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCC
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCc
Confidence            36888999999999999999999999999999999999987654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.79  E-value=1.2e-18  Score=122.77  Aligned_cols=92  Identities=23%  Similarity=0.299  Sum_probs=77.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   83 (275)
T 4imr_A           33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTA---------------------------AVQQRIIAS--GGT   83 (275)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            799999999999999999999999999999999876542                           112233222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++.+.+. +++|+||||||+....+
T Consensus        84 ~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg~~~~~~  124 (275)
T 4imr_A           84 AQELAGDLSEAGAGTDLIERAEAI-APVDILVINASAQINAT  124 (275)
T ss_dssp             EEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCCCCCCBC
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCCCCCCCC
Confidence            889999999999999999999887 99999999999877654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.79  E-value=1.4e-18  Score=121.60  Aligned_cols=88  Identities=20%  Similarity=0.225  Sum_probs=75.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                              +.+...    .
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------------------------~~~~~~----~   72 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV------------------------------TELRQA----G   72 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH------------------------------HHHHHH----T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------------------------------HHHHhc----C
Confidence            789999999999999999999999999999999876431                              111111    2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....+
T Consensus        73 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~  114 (260)
T 3gem_A           73 AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAET  114 (260)
T ss_dssp             CEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCC
T ss_pred             CeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCC
Confidence            567899999999999999999999999999999999876543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.79  E-value=2e-18  Score=119.04  Aligned_cols=94  Identities=29%  Similarity=0.456  Sum_probs=77.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCC-------eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHH
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGH-------QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAM   73 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (125)
                      |+|+++|||+++|||++++++|+++|+       +|++++|+.+...                           +..+.+
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~---------------------------~~~~~~   53 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLE---------------------------KISLEC   53 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHH---------------------------HHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHH---------------------------HHHHHH
Confidence            579999999999999999999999999       9999999865441                           111222


Q ss_pred             hhcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          74 AKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        74 ~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ..  .+.++.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        54 ~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~  101 (244)
T 2bd0_A           54 RA--EGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA  101 (244)
T ss_dssp             HT--TTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCC
T ss_pred             Hc--cCCeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCc
Confidence            21  1237889999999999999999999999999999999999876543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.78  E-value=1.1e-18  Score=119.67  Aligned_cols=90  Identities=36%  Similarity=0.502  Sum_probs=75.6

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+.....  
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~--   50 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL-------------------------------QALAAELE--   50 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHST--
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHhh--
Confidence            478999999999999999999999999999999986543                               11111111  


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|++++.++++.+.+.++++|+||||||+....+
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~   93 (234)
T 2ehd_A           51 GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKP   93 (234)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSC
T ss_pred             hceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            4678899999999999999999999999999999999876543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.78  E-value=1e-18  Score=122.11  Aligned_cols=96  Identities=27%  Similarity=0.318  Sum_probs=78.9

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||++  +|||++++++|+++|++|++++|+.....                          .+..+.+.... +
T Consensus        20 ~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~~l~~~~-~   72 (267)
T 3gdg_A           20 GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGA--------------------------EENVKELEKTY-G   72 (267)
T ss_dssp             TCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHH--------------------------HHHHHHHHHHH-C
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhH--------------------------HHHHHHHHHhc-C
Confidence            7999999999  99999999999999999999998865331                          11123332222 2


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .++.++++|++|++++.++++++.++++++|+||||||+....++
T Consensus        73 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~  117 (267)
T 3gdg_A           73 IKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGI  117 (267)
T ss_dssp             CCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCT
T ss_pred             CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence            378899999999999999999999999999999999999876653

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.78  E-value=2.3e-19  Score=124.97  Aligned_cols=87  Identities=33%  Similarity=0.463  Sum_probs=71.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+....                             ..+.+...  +.+
T Consensus         9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~-----------------------------~~~~~~~~--g~~   57 (247)
T 4hp8_A            9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDE-----------------------------TLDIIAKD--GGN   57 (247)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHH-----------------------------HHHHHHHT--TCC
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHH-----------------------------HHHHHHHh--CCc
Confidence            89999999999999999999999999999999975421                             11222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++     ++++|+||||||+....|+
T Consensus        58 ~~~~~~Dv~d~~~v~~~~~-----~g~iDiLVNNAGi~~~~~~   95 (247)
T 4hp8_A           58 ASALLIDFADPLAAKDSFT-----DAGFDILVNNAGIIRRADS   95 (247)
T ss_dssp             EEEEECCTTSTTTTTTSST-----TTCCCEEEECCCCCCCCCG
T ss_pred             EEEEEccCCCHHHHHHHHH-----hCCCCEEEECCCCCCCCCc
Confidence            8899999999999877764     4899999999999887765

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.78  E-value=2.1e-18  Score=120.49  Aligned_cols=91  Identities=24%  Similarity=0.266  Sum_probs=76.4

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||++  +|||+++++.|+++|++|++++|+....                            +....+......
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~----------------------------~~~~~~~~~~~~   58 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE----------------------------KSVHELAGTLDR   58 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH----------------------------HHHHHHHHTSSS
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH----------------------------HHHHHHHHhcCC
Confidence            7899999999  6799999999999999999999986433                            112333333333


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++++|++|++++.++++++.++++++|+||||||+..
T Consensus        59 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~   99 (266)
T 3oig_A           59 NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFAN   99 (266)
T ss_dssp             CCCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CCceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEcccccc
Confidence            36889999999999999999999999999999999999876

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.78  E-value=1.8e-18  Score=120.19  Aligned_cols=94  Identities=24%  Similarity=0.355  Sum_probs=76.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec-CchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR-RAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||++++++|+++|++|+++++ +....                           .+..+.+...  +.
T Consensus        13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~---------------------------~~~~~~~~~~--~~   63 (256)
T 3ezl_A           13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRR---------------------------VKWLEDQKAL--GF   63 (256)
T ss_dssp             CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSH---------------------------HHHHHHHHHT--TC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHH---------------------------HHHHHHHHhc--CC
Confidence            689999999999999999999999999999884 43322                           1112222222  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++.+|++|++++.++++++.++++++|+||||||+....++
T Consensus        64 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~  107 (256)
T 3ezl_A           64 DFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVF  107 (256)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCT
T ss_pred             eeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCch
Confidence            68889999999999999999999999999999999999876543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.78  E-value=1.5e-18  Score=120.74  Aligned_cols=94  Identities=35%  Similarity=0.466  Sum_probs=76.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~-~~~   65 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAV---------------------------EVTEKVGKEF-GVK   65 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHH---------------------------HHHHHHHHHH-TCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhH---------------------------HHHHHHHHhc-CCe
Confidence            689999999999999999999999999999999765431                           1112222111 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+.++++|+||||||+....+
T Consensus        66 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~  107 (265)
T 1h5q_A           66 TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP  107 (265)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSC
T ss_pred             eEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCc
Confidence            788999999999999999999999999999999999876544

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.78  E-value=2.1e-18  Score=121.71  Aligned_cols=94  Identities=28%  Similarity=0.426  Sum_probs=76.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                          +...+.+...  +.+
T Consensus        29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------------------------~~~~~~~~~~--~~~   80 (283)
T 1g0o_A           29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESA--------------------------EEVVAAIKKN--GSD   80 (283)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHH--------------------------HHHHHHHHHh--CCC
Confidence            789999999999999999999999999999999865321                          0111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        81 ~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~  122 (283)
T 1g0o_A           81 AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH  122 (283)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            788999999999999999999999999999999999886544

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.78  E-value=1e-18  Score=123.04  Aligned_cols=89  Identities=29%  Similarity=0.461  Sum_probs=74.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...   .+
T Consensus        21 ~k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~---~~   70 (272)
T 2nwq_A           21 SSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQ---------------------------ALAGELSAK---TR   70 (272)
T ss_dssp             CCEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHTTT---SC
T ss_pred             CcEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHhhcC---Cc
Confidence            479999999999999999999999999999999876441                           111222211   36


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|++++.++++.+.+++|++|+||||||+..
T Consensus        71 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~  109 (272)
T 2nwq_A           71 VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLAL  109 (272)
T ss_dssp             EEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCC
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            788999999999999999999999999999999999875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.78  E-value=2.1e-18  Score=122.81  Aligned_cols=95  Identities=29%  Similarity=0.417  Sum_probs=77.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC-Cc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP-DW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   80 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+..... ..
T Consensus        26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   78 (297)
T 1xhl_A           26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE---------------------------ETKQQILKAGVPAE   78 (297)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHTTCCGG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhcCCCCc
Confidence            689999999999999999999999999999999876442                           11122221111 11


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|++++.++++++.+++|++|+||||||+....+
T Consensus        79 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~  121 (297)
T 1xhl_A           79 KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADG  121 (297)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCS
T ss_pred             eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCC
Confidence            5788999999999999999999999999999999999876543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.78  E-value=1.8e-18  Score=124.69  Aligned_cols=95  Identities=23%  Similarity=0.298  Sum_probs=77.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEee-cCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFA-RRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||+++++.|+++|++|++++ |+.+...                           +..+.+.... +.
T Consensus        46 ~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~---------------------------~~~~~l~~~~-~~   97 (328)
T 2qhx_A           46 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN---------------------------ALSATLNARR-PN   97 (328)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHHHS-TT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHH---------------------------HHHHHHHhhc-CC
Confidence            68999999999999999999999999999999 8765441                           1112222112 23


Q ss_pred             eeeEEEecCCChH-----------------HHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDA-----------------EVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~-----------------~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++++|++|++                 ++.++++++.+++|++|+||||||+....++
T Consensus        98 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~  158 (328)
T 2qhx_A           98 SAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL  158 (328)
T ss_dssp             CEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCS
T ss_pred             eEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCh
Confidence            6888999999999                 9999999999999999999999999866543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.78  E-value=3.9e-18  Score=118.44  Aligned_cols=90  Identities=28%  Similarity=0.424  Sum_probs=75.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           ...+.+...  +.+
T Consensus        13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   63 (260)
T 3awd_A           13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMAT---------------------------KAVEDLRME--GHD   63 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999865431                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|++++.++++++.++++++|+||||||+..
T Consensus        64 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~  102 (260)
T 3awd_A           64 VSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICI  102 (260)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            888999999999999999999999999999999999876

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=4.1e-18  Score=119.62  Aligned_cols=93  Identities=22%  Similarity=0.352  Sum_probs=77.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   81 (272)
T 1yb1_A           31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE---------------------------ETAAKCKGL--GAK   81 (272)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            789999999999999999999999999999999875441                           111222222  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+.++++|+||||||+....+
T Consensus        82 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~  123 (272)
T 1yb1_A           82 VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSD  123 (272)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCC
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcc
Confidence            888999999999999999999999999999999999877654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.78  E-value=2.4e-18  Score=121.99  Aligned_cols=94  Identities=24%  Similarity=0.428  Sum_probs=77.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus        26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~-~~~   77 (302)
T 1w6u_A           26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK---------------------------ATAEQISSQT-GNK   77 (302)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHH-SSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHhc-CCc
Confidence            689999999999999999999999999999999876441                           1112222211 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++.+.++++++|+||||||+....+
T Consensus        78 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~  119 (302)
T 1w6u_A           78 VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISP  119 (302)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSC
T ss_pred             eEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence            888999999999999999999999999999999999876543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.78  E-value=3e-18  Score=119.43  Aligned_cols=90  Identities=30%  Similarity=0.434  Sum_probs=75.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   64 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVD---------------------------RTVATLQGE--GLS   64 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999999876441                           111222222  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+..
T Consensus        65 ~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~  103 (260)
T 2zat_A           65 VTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNP  103 (260)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            788999999999999999999999999999999999864

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.78  E-value=2.1e-18  Score=120.02  Aligned_cols=91  Identities=27%  Similarity=0.459  Sum_probs=75.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+..                             ..+.+...  +.+
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----------------------------~~~~l~~~--~~~   52 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAP-----------------------------ALAEIARH--GVK   52 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH-----------------------------HHHHHHTT--SCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH-----------------------------HHHHHHhc--CCc
Confidence            78999999999999999999999999999999976511                             11222211  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....+
T Consensus        53 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~   94 (255)
T 2q2v_A           53 AVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAP   94 (255)
T ss_dssp             EEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBC
T ss_pred             eEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            788899999999999999999999999999999999876544

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.77  E-value=2.3e-18  Score=119.85  Aligned_cols=89  Identities=24%  Similarity=0.342  Sum_probs=75.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+     +.+
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~-----~~~   59 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE---------------------------AQAKKL-----GNN   59 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH---------------------------HHHHHH-----CTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHH---------------------------HHHHHh-----CCc
Confidence            689999999999999999999999999999999876441                           111222     226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|++|++++.++++++.++++++|+||||||+....
T Consensus        60 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~  100 (265)
T 2o23_A           60 CVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVAS  100 (265)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCC
Confidence            78899999999999999999999999999999999987654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.77  E-value=1.7e-18  Score=124.76  Aligned_cols=99  Identities=34%  Similarity=0.452  Sum_probs=76.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|+++.|+.......                      ..+...+.....  +.+
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~----------------------~~~~l~~~~~~~--~~~   60 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNAS----------------------NVEAIAGFARDN--DVD   60 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHH----------------------HHHHHHHHHHHH--TCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHH----------------------HHHHHHHHHHhc--CCc
Confidence            68999999999999999999999999999998874211000                      000111111111  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++|++|+||||||+....++
T Consensus        61 ~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~  103 (324)
T 3u9l_A           61 LRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPA  103 (324)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCG
T ss_pred             EEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCh
Confidence            8899999999999999999999999999999999998876553

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.77  E-value=3.1e-18  Score=120.00  Aligned_cols=91  Identities=31%  Similarity=0.516  Sum_probs=74.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+.....+..
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   62 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVN---------------------------ETIKEIRAQYPDAI   62 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHHHHHCTTCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhhCCCce
Confidence            689999999999999999999999999999999876542                           22233433333447


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+.+|+++++++.++++    +++++|+||||||+....+
T Consensus        63 ~~~~~~D~~~~~~~~~~~~----~~g~id~lv~nAg~~~~~~  100 (267)
T 3t4x_A           63 LQPVVADLGTEQGCQDVIE----KYPKVDILINNLGIFEPVE  100 (267)
T ss_dssp             EEEEECCTTSHHHHHHHHH----HCCCCSEEEECCCCCCCCC
T ss_pred             EEEEecCCCCHHHHHHHHH----hcCCCCEEEECCCCCCCCc
Confidence            8889999999999877664    5789999999999987654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.77  E-value=3.9e-18  Score=119.07  Aligned_cols=90  Identities=20%  Similarity=0.242  Sum_probs=75.7

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||++  +|||+++++.|+++|++|++++|+....                            +..+.+....+ 
T Consensus        14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~----------------------------~~~~~~~~~~~-   64 (271)
T 3ek2_A           14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK----------------------------DRITEFAAEFG-   64 (271)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH----------------------------HHHHHHHHHTT-
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH----------------------------HHHHHHHHHcC-
Confidence            7899999998  9999999999999999999999985432                            11233333332 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       .+.++++|++|++++.++++++.++++++|+||||||+...
T Consensus        65 -~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~  105 (271)
T 3ek2_A           65 -SELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPR  105 (271)
T ss_dssp             -CCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCG
T ss_pred             -CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcc
Confidence             47789999999999999999999999999999999998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.77  E-value=3.4e-18  Score=119.14  Aligned_cols=92  Identities=27%  Similarity=0.401  Sum_probs=75.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH---cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA---KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      +|++||||+++|||+++++.|++   +|++|++++|+.+...                           +..+.+.....
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~   58 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLR---------------------------QLKEELGAQQP   58 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHH---------------------------HHHHHHHHHCT
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHH---------------------------HHHHHHHhhCC
Confidence            78999999999999999999999   8999999999876442                           11223322222


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHh--hcCCcc--EEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINN--KFGHID--VMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~id--~lv~nag~~~  120 (125)
                      +.++.++++|++|++++.++++.+.+  .+|++|  +||||||+..
T Consensus        59 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~  104 (259)
T 1oaa_A           59 DLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLG  104 (259)
T ss_dssp             TSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCC
T ss_pred             CCeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccC
Confidence            34788999999999999999999988  778999  9999999864

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.77  E-value=3.3e-18  Score=119.98  Aligned_cols=91  Identities=31%  Similarity=0.520  Sum_probs=74.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||++++++|+++|++|+++ .|+.+...                           ...+.+...  +.
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~---------------------------~~~~~~~~~--~~   76 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAAD---------------------------AVVAAITES--GG   76 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHHT--TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHH---------------------------HHHHHHHhc--CC
Confidence            6899999999999999999999999999887 55544331                           111222222  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++.++.+|++|++++.++++++.++++++|+||||||+...
T Consensus        77 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~  117 (272)
T 4e3z_A           77 EAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDY  117 (272)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCC
Confidence            78899999999999999999999999999999999998764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.77  E-value=8.8e-19  Score=121.74  Aligned_cols=86  Identities=33%  Similarity=0.546  Sum_probs=72.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+    . .++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~----~-~~~   48 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ---------------------------ELKDEL----G-DNL   48 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHH----C-TTE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHh----c-Cce
Confidence            68999999999999999999999999999999865441                           111111    1 257


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|++++.++++++.+++|++|+||||||+..
T Consensus        49 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~   86 (248)
T 3asu_A           49 YIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLAL   86 (248)
T ss_dssp             EEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCC
T ss_pred             EEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC
Confidence            88999999999999999999999999999999999863

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.77  E-value=3.3e-18  Score=117.96  Aligned_cols=94  Identities=30%  Similarity=0.457  Sum_probs=76.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+.... +.+
T Consensus         7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~-~~~   58 (248)
T 2pnf_A            7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAK---------------------------AVAEEIANKY-GVK   58 (248)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHHHHHH-CCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHH---------------------------HHHHHHHhhc-CCc
Confidence            689999999999999999999999999999999865441                           1112221111 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+.++++|+||||||+....+
T Consensus        59 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~  100 (248)
T 2pnf_A           59 AHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKL  100 (248)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCC
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCc
Confidence            788999999999999999999999999999999999876543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.77  E-value=2.6e-18  Score=122.09  Aligned_cols=92  Identities=26%  Similarity=0.269  Sum_probs=74.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.....                          .+......... +.+
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~--------------------------~~~~~~~~~~~-~~~  101 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEED--------------------------AQQVKALIEEC-GRK  101 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHH--------------------------HHHHHHHHHHT-TCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhH--------------------------HHHHHHHHHHc-CCc
Confidence            789999999999999999999999999999998743210                          01111111222 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+..
T Consensus       102 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~  140 (294)
T 3r3s_A          102 AVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQT  140 (294)
T ss_dssp             EEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred             EEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcC
Confidence            888999999999999999999999999999999999865

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.77  E-value=2.4e-18  Score=122.40  Aligned_cols=90  Identities=18%  Similarity=0.264  Sum_probs=74.4

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||+++  |||+++++.|+++|++|++++|+.+....                            .+.+..... 
T Consensus        30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~----------------------------~~~~~~~~~-   80 (296)
T 3k31_A           30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR----------------------------VDPLAESLG-   80 (296)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH----------------------------HHHHHHHHT-
T ss_pred             CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHH----------------------------HHHHHHhcC-
Confidence            78999999986  99999999999999999999998653311                            122211112 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       .+.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        81 -~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~  121 (296)
T 3k31_A           81 -VKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDK  121 (296)
T ss_dssp             -CCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCH
T ss_pred             -CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCc
Confidence             35788999999999999999999999999999999998753

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.77  E-value=3.6e-18  Score=120.00  Aligned_cols=86  Identities=33%  Similarity=0.493  Sum_probs=73.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+..                               +.+.....  .
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~--~   55 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG-------------------------------RALEQELP--G   55 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHCT--T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHhc--C
Confidence            78999999999999999999999999999999986544                               11211222  3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+..
T Consensus        56 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~   94 (270)
T 1yde_A           56 AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHP   94 (270)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             CeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            678899999999999999999999999999999999875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.77  E-value=2.1e-18  Score=120.22  Aligned_cols=83  Identities=36%  Similarity=0.504  Sum_probs=73.5

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||++++++|+++|++|++++|+.+..                               +         
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------------------------~---------   59 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------------------------E---------   59 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------------------------T---------
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------------------------c---------
Confidence            379999999999999999999999999999999976432                               0         


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .+.++++|++|++++.++++++.++++++|+||||||+....+
T Consensus        60 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~  102 (253)
T 2nm0_A           60 GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL  102 (253)
T ss_dssp             TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC
T ss_pred             cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            2567899999999999999999999999999999999876544

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.77  E-value=4.4e-18  Score=117.59  Aligned_cols=92  Identities=22%  Similarity=0.424  Sum_probs=76.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+..   ..+
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~---~~~   55 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE---------------------------KAAKSVGT---PDQ   55 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHCC---TTT
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHhhc---cCc
Confidence            789999999999999999999999999999999865431                           11122211   136


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++.+.+.++++|+||||||+....+
T Consensus        56 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~   97 (251)
T 1zk4_A           56 IQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKS   97 (251)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876544

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.77  E-value=4.9e-18  Score=117.29  Aligned_cols=91  Identities=27%  Similarity=0.441  Sum_probs=74.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+.... ..+
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~-~~~   65 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLA---------------------------EVSDQIKSAG-QPQ   65 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHTT-SCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHH---------------------------HHHHHHHhcC-CCC
Confidence            789999999999999999999999999999999976552                           1122232222 124


Q ss_pred             eeEEEecC--CChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDV--TKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv--~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+  ++++++.++++++.+.++++|+||||||+..
T Consensus        66 ~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~  106 (247)
T 3i1j_A           66 PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIG  106 (247)
T ss_dssp             CEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred             ceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCC
Confidence            55666666  9999999999999999999999999999864

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.77  E-value=6e-18  Score=117.06  Aligned_cols=93  Identities=27%  Similarity=0.459  Sum_probs=76.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           ...+.+...  +.+
T Consensus        11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   61 (255)
T 1fmc_A           11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN---------------------------HVVDEIQQL--GGQ   61 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHH---------------------------HHHHHHHHh--CCc
Confidence            689999999999999999999999999999999865431                           111222221  226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        62 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~  103 (255)
T 1fmc_A           62 AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKP  103 (255)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCC
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            788999999999999999999999999999999999876543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.77  E-value=5e-18  Score=118.40  Aligned_cols=87  Identities=28%  Similarity=0.394  Sum_probs=72.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                           ...+.+...  +.+
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   55 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLR---------------------------VVAQEAQSL--GGQ   55 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHH--SSE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHHc--CCc
Confidence            789999999999999999999999999999999866441                           111222222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhh-cCCccEEEeCcc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNK-FGHIDVMINNAG  117 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id~lv~nag  117 (125)
                      +.++++|++|++++.++++.+.++ +|++|+||||||
T Consensus        56 ~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg   92 (260)
T 2qq5_A           56 CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAY   92 (260)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCc
Confidence            888999999999999999999886 899999999995

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.77  E-value=2.7e-18  Score=119.38  Aligned_cols=81  Identities=26%  Similarity=0.316  Sum_probs=71.6

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|++||||+++|||++++++|+++|++|++++|+.+..                                         
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-----------------------------------------   59 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-----------------------------------------   59 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------------------------------
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------------------------------
Confidence            789999999999999999999999999999999987533                                         


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ....+.+|++|++++.++++++.++++++|+||||||+....
T Consensus        60 ~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~  101 (251)
T 3orf_A           60 ADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGG  101 (251)
T ss_dssp             SSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCB
T ss_pred             cccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC
Confidence            112468899999999999999999999999999999987654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.77  E-value=6e-18  Score=117.14  Aligned_cols=88  Identities=35%  Similarity=0.463  Sum_probs=74.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC-chhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR-AEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+ .+...                           +..+.+...  +.
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~--~~   57 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID---------------------------ETIASMRAD--GG   57 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHH---------------------------HHHHHHHHT--TC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHH---------------------------HHHHHHHhc--CC
Confidence            7899999999999999999999999999999998 54331                           111222221  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCccc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV  118 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~  118 (125)
                      ++.++.+|++|++++.++++++.++++++|+||||||+
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~   95 (258)
T 3afn_B           58 DAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGG   95 (258)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            78899999999999999999999999999999999998

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.77  E-value=4.2e-18  Score=121.02  Aligned_cols=89  Identities=18%  Similarity=0.298  Sum_probs=73.7

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||++  +|||+++++.|+++|++|++++|+.....                            ..+.+..... 
T Consensus        31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~----------------------------~~~~~~~~~~-   81 (293)
T 3grk_A           31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK----------------------------RVEPLAEELG-   81 (293)
T ss_dssp             TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH----------------------------HHHHHHHHHT-
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH----------------------------HHHHHHHhcC-
Confidence            7899999999  55999999999999999999999854221                            1122222222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       ++.++++|++|++++.++++++.+++|++|+||||||+..
T Consensus        82 -~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~  121 (293)
T 3grk_A           82 -AFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSD  121 (293)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCC
T ss_pred             -CceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence             5778999999999999999999999999999999999875

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.77  E-value=5.7e-18  Score=116.61  Aligned_cols=93  Identities=34%  Similarity=0.453  Sum_probs=75.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ||+++|||+++|||++++++|+++|++|+++ .|+.+...                           ...+.+...  +.
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~---------------------------~~~~~~~~~--~~   51 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE---------------------------EVSKQIEAY--GG   51 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHHH--TC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            6899999999999999999999999999994 77755431                           111222211  22


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++++|++|++++.++++++.++++++|+||||||+....+
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~   94 (244)
T 1edo_A           52 QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL   94 (244)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCC
T ss_pred             cEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcC
Confidence            6888999999999999999999999999999999999877543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.77  E-value=6.1e-18  Score=119.09  Aligned_cols=92  Identities=28%  Similarity=0.406  Sum_probs=73.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+....                            +..+.+..  .+.+
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~----------------------------~~~~~~~~--~~~~   80 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVK----------------------------EVADEIAD--GGGS   80 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHH----------------------------HHHHHHHT--TTCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHH----------------------------HHHHHHHh--cCCc
Confidence            78999999999999999999999999999999764322                            11122222  2347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++.+ ..++++++|+||||||+....++
T Consensus        81 ~~~~~~Dv~d~~~v~~~~~-~~~~~g~iD~lv~nAg~~~~~~~  122 (273)
T 3uf0_A           81 AEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIARAPA  122 (273)
T ss_dssp             EEEEECCTTCHHHHHHHHH-HHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEEecCCCHHHHHHHHH-HHHhcCCCcEEEECCCCCCCCCc
Confidence            8899999999999999854 45667999999999999876553

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.77  E-value=4.3e-18  Score=118.41  Aligned_cols=95  Identities=21%  Similarity=0.283  Sum_probs=75.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc-----
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE-----   76 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   76 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.....                           .+.+...     
T Consensus         7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~---------------------------~~~~~~~~~~~~   59 (264)
T 2pd6_A            7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQET---------------------------VRLLGGPGSKEG   59 (264)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------------------------HHTC--------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHH---------------------------HHHHHhcCcccc
Confidence            78999999999999999999999999999999987644211                           0111100     


Q ss_pred             CCCceeeEEEecCCChHHHHHHHHHHHhhcCCc-cEEEeCcccCCCcC
Q psy7029          77 NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHI-DVMINNAGVNEFAP  123 (125)
Q Consensus        77 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i-d~lv~nag~~~~~~  123 (125)
                      ....++.++.+|++|++++.++++.+.++++++ |+||||||+....+
T Consensus        60 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~  107 (264)
T 2pd6_A           60 PPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF  107 (264)
T ss_dssp             ----CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBC
T ss_pred             ccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcc
Confidence            011367889999999999999999999999999 99999999876543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.77  E-value=7.6e-18  Score=118.94  Aligned_cols=93  Identities=29%  Similarity=0.453  Sum_probs=76.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~~   94 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD---------------------------SVVDEIKSF--GYE   94 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHH---------------------------HHHHHHHTT--TCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            689999999999999999999999999999988765441                           111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.+.++++|+||||||+....+
T Consensus        95 ~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~  136 (285)
T 2c07_A           95 SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNL  136 (285)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCC
T ss_pred             eeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCc
Confidence            888999999999999999999999999999999999986544

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.76  E-value=6.7e-18  Score=119.82  Aligned_cols=95  Identities=25%  Similarity=0.477  Sum_probs=77.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc---CC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE---NP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   78 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           ...+.+...   ..
T Consensus        18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~l~~~~~~~~   70 (303)
T 1yxm_A           18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK---------------------------SAADELQANLPPTK   70 (303)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHTSCTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhhccccC
Confidence            689999999999999999999999999999999876442                           111222211   12


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.++.+|++|++++.++++.+.++++++|+||||||+....+
T Consensus        71 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~  115 (303)
T 1yxm_A           71 QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP  115 (303)
T ss_dssp             CCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             CccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence            337889999999999999999999999999999999999765443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.76  E-value=6.7e-18  Score=117.37  Aligned_cols=92  Identities=28%  Similarity=0.484  Sum_probs=75.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec-CchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR-RAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||++++++|+++|++|++++| +.+...                           +..+.+...  +.
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------------------~~~~~l~~~--~~   57 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEAN---------------------------SVLEEIKKV--GG   57 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHHT--TC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHH---------------------------HHHHHHHhc--CC
Confidence            689999999999999999999999999999999 544331                           111222221  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++.+|++|++++.++++++.++++++|+||||||+....
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~   99 (261)
T 1gee_A           58 EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV   99 (261)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence            688899999999999999999999999999999999987654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.76  E-value=7e-18  Score=116.09  Aligned_cols=87  Identities=31%  Similarity=0.425  Sum_probs=75.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||+++|||+++++.|+++|  ++|++++|+.+..                               +.+... .+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~-------------------------------~~l~~~-~~   50 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA-------------------------------TELKSI-KD   50 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC-------------------------------HHHHTC-CC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH-------------------------------HHHHhc-cC
Confidence            7899999999999999999999999  9999999987644                               111111 23


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcC--CccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFG--HIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id~lv~nag~~~  120 (125)
                      .++.++.+|++|++++.++++++.++++  ++|+||||||+..
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~   93 (250)
T 1yo6_A           51 SRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLL   93 (250)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCC
T ss_pred             CceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccC
Confidence            3688999999999999999999999998  9999999999887

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.76  E-value=5.4e-18  Score=117.72  Aligned_cols=91  Identities=23%  Similarity=0.307  Sum_probs=74.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||++++++|+++|++ |++++|+....                             ..+.+.....+.
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~-----------------------------~~~~l~~~~~~~   55 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT-----------------------------ALAELKAINPKV   55 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH-----------------------------HHHHHHHHCTTS
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHH-----------------------------HHHHHHHhCCCc
Confidence            789999999999999999999999997 99999986321                             012222222234


Q ss_pred             eeeEEEecCCCh-HHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKD-AEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++.++.+|++|+ +++.++++++.++++++|+||||||+...
T Consensus        56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~   97 (254)
T 1sby_A           56 NITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD   97 (254)
T ss_dssp             EEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCCT
T ss_pred             eEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccCCH
Confidence            788999999998 99999999999999999999999998643

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.76  E-value=8.5e-18  Score=117.06  Aligned_cols=88  Identities=30%  Similarity=0.384  Sum_probs=74.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+. ..                           ..+.+    .  +
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~---------------------------~~~~~----~--~   51 (256)
T 2d1y_A            6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KE---------------------------VAEAI----G--G   51 (256)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HH---------------------------HHHHH----T--C
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HH---------------------------HHHHh----h--C
Confidence            6899999999999999999999999999999998653 10                           01111    1  3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                       .++++|++|++++.++++++.++++++|+||||||+....++
T Consensus        52 -~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~   93 (256)
T 2d1y_A           52 -AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSA   93 (256)
T ss_dssp             -EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred             -CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence             678999999999999999999999999999999998876543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.76  E-value=6.4e-18  Score=118.78  Aligned_cols=90  Identities=13%  Similarity=0.241  Sum_probs=74.6

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||++  +|||+++++.|+++|++|++++|+.+ ..                           +..+.+....+ 
T Consensus         6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~---------------------------~~~~~l~~~~~-   56 (275)
T 2pd4_A            6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LE---------------------------KRVRPIAQELN-   56 (275)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-TH---------------------------HHHHHHHHHTT-
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HH---------------------------HHHHHHHHhcC-
Confidence            6899999999  99999999999999999999999864 21                           11123322222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       .+.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        57 -~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~   97 (275)
T 2pd4_A           57 -SPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPK   97 (275)
T ss_dssp             -CCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCG
T ss_pred             -CcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcc
Confidence             36788999999999999999999999999999999998753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.76  E-value=5.4e-18  Score=118.72  Aligned_cols=83  Identities=34%  Similarity=0.607  Sum_probs=74.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+.                                        +.+
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------------------------------~~~   47 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------------------------------EAK   47 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------------------------------SCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------------------------------CCc
Confidence            7899999999999999999999999999999997541                                        125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        48 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~   90 (264)
T 2dtx_A           48 YDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKI   90 (264)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence            6788999999999999999999999999999999998776543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.76  E-value=4.4e-18  Score=119.78  Aligned_cols=87  Identities=23%  Similarity=0.332  Sum_probs=72.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+...                           +..+.+     +.+
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~---------------------------~~~~~~-----~~~   77 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGK---------------------------ALADEL-----GNR   77 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHH-----CTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHH---------------------------HHHHHh-----CCc
Confidence            789999999999999999999999999999999876541                           111222     226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeC-cccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINN-AGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n-ag~~~~  121 (125)
                      +.++++|++|++++.++++.+ ++++++|++||| +|+...
T Consensus        78 ~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~  117 (281)
T 3ppi_A           78 AEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVA  117 (281)
T ss_dssp             EEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCC
T ss_pred             eEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccCccccc
Confidence            889999999999999999999 889999999999 665543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.76  E-value=6e-18  Score=117.11  Aligned_cols=89  Identities=28%  Similarity=0.406  Sum_probs=74.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+     +.+
T Consensus        11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~-----~~~   58 (254)
T 2wsb_A           11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALD---------------------------RAAQEL-----GAA   58 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHH-----GGG
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHh-----ccc
Confidence            689999999999999999999999999999999865441                           111222     124


Q ss_pred             e-eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 V-HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~-~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      + .++.+|++|++++.++++++.+ ++++|+||||||+....+
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~~~~~  100 (254)
T 2wsb_A           59 VAARIVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIARLHD  100 (254)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCCCCBC
T ss_pred             ceeEEEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccCCCCC
Confidence            5 7889999999999999999988 899999999999876644

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.76  E-value=9.3e-18  Score=115.71  Aligned_cols=92  Identities=27%  Similarity=0.400  Sum_probs=70.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||++++++|+++|++|+++ .|+.+...                           +..+.+...  +.
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~---------------------------~~~~~~~~~--~~   55 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLD---------------------------ATAEEFKAA--GI   55 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHH---------------------------HHHHHHHHT--TC
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHH---------------------------HHHHHHHhc--CC
Confidence            6899999999999999999999999999999 55544331                           111222221  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++.+|++|++++.++++++.+.++++|+||||||+....
T Consensus        56 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~   97 (247)
T 2hq1_A           56 NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDT   97 (247)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC------
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence            688899999999999999999999999999999999987543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.75  E-value=1.6e-17  Score=117.21  Aligned_cols=92  Identities=23%  Similarity=0.264  Sum_probs=74.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+.+....                           ..+.+.... ..+
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~~-~~~   79 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQK---------------------------VVSHCLELG-AAS   79 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---------------------------HHHHHHHHT-CSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------------------------HHHHHHHhC-CCc
Confidence            7899999999999999999999999999999998765421                           112222111 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeC-cccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINN-AGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n-ag~~~~  121 (125)
                      +.++.+|++|++++.++++++.+.+|++|+|||| +|+...
T Consensus        80 ~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~~  120 (286)
T 1xu9_A           80 AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL  120 (286)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCC
T ss_pred             eEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC
Confidence            8889999999999999999999999999999999 676543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.75  E-value=1.1e-17  Score=118.01  Aligned_cols=89  Identities=18%  Similarity=0.234  Sum_probs=74.8

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++|||||+  +|||+++++.|+++|++|++++|+.. .                            +..+.+..... 
T Consensus        26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~-~----------------------------~~~~~l~~~~~-   75 (280)
T 3nrc_A           26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQF-K----------------------------DRVEKLCAEFN-   75 (280)
T ss_dssp             TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTC-H----------------------------HHHHHHHGGGC-
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchH-H----------------------------HHHHHHHHhcC-
Confidence            7899999988  78999999999999999999999861 1                            11233333322 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       ++.++.+|++|++++.++++++.++++++|+||||||+...
T Consensus        76 -~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~  116 (280)
T 3nrc_A           76 -PAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPR  116 (280)
T ss_dssp             -CSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCG
T ss_pred             -CceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCC
Confidence             47789999999999999999999999999999999998764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.75  E-value=1.3e-17  Score=116.16  Aligned_cols=91  Identities=25%  Similarity=0.386  Sum_probs=75.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH-cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA-KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||+++++.|++ +|++|++++|+.+...                           +..+.+...  +.
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~---------------------------~~~~~l~~~--~~   54 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQ---------------------------AAVQQLQAE--GL   54 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHH---------------------------HHHHHHHHT--TC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHH---------------------------HHHHHHHhc--CC
Confidence            68999999999999999999999 8999999999865441                           112222222  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++.++.+|++|++++.++++++.++++++|+||||||+...
T Consensus        55 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~   95 (276)
T 1wma_A           55 SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFK   95 (276)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCC
T ss_pred             eeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccccc
Confidence            67889999999999999999999999999999999998754

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.75  E-value=1.3e-17  Score=117.82  Aligned_cols=90  Identities=17%  Similarity=0.280  Sum_probs=74.1

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||++  +|||+++++.|+++|++|++++|+.+..                            +..+.+....+ 
T Consensus        21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------------------~~~~~l~~~~~-   71 (285)
T 2p91_A           21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLE----------------------------KRVREIAKGFG-   71 (285)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGH----------------------------HHHHHHHHHTT-
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHH----------------------------HHHHHHHHhcC-
Confidence            5899999999  9999999999999999999999986411                            11122322222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       .+.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        72 -~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~  112 (285)
T 2p91_A           72 -SDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPK  112 (285)
T ss_dssp             -CCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCG
T ss_pred             -CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCc
Confidence             35788999999999999999999999999999999998753

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.75  E-value=1e-17  Score=116.84  Aligned_cols=93  Identities=28%  Similarity=0.452  Sum_probs=74.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus        14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~--~~~   64 (266)
T 1xq1_A           14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN---------------------------ECLSKWQKK--GFQ   64 (266)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------------------------HHHHHHHhc--CCe
Confidence            689999999999999999999999999999999865441                           111222222  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhc-CCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++++++.++++++.+.+ +++|+||||||+....+
T Consensus        65 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~  107 (266)
T 1xq1_A           65 VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP  107 (266)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-----
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCC
Confidence            7889999999999999999999998 89999999999876543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.75  E-value=9.1e-18  Score=117.67  Aligned_cols=88  Identities=20%  Similarity=0.305  Sum_probs=74.1

Q ss_pred             CcEEEEecC--CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||+  ++|||+++++.|+++|++|++++|+.+..                              .+.+....+ 
T Consensus         7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~------------------------------~~~~~~~~~-   55 (269)
T 2h7i_A            7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL------------------------------IQRITDRLP-   55 (269)
T ss_dssp             TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH------------------------------HHHHHTTSS-
T ss_pred             CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH------------------------------HHHHHHhcC-
Confidence            689999999  99999999999999999999999986532                              012222222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcC---CccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFG---HIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g---~id~lv~nag~~~  120 (125)
                      .++.++++|++|++++.++++++.+++|   ++|+||||||+..
T Consensus        56 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~   99 (269)
T 2h7i_A           56 AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMP   99 (269)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCC
T ss_pred             CCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCc
Confidence            2577899999999999999999999999   9999999999876

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.75  E-value=1.4e-17  Score=116.96  Aligned_cols=91  Identities=27%  Similarity=0.312  Sum_probs=75.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+....                           ..+.+...  +.+
T Consensus        34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~---------------------------~~~~~~~~--~~~   84 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEK---------------------------AEHLQKTY--GVH   84 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHH---------------------------HHHHHHHH--CSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------------------------HHHHHHhc--CCc
Confidence            7899999999999999999999999999999998754311                           11111111  226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|++++.++++.+.+.++++|+||||||+...
T Consensus        85 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~  124 (279)
T 3ctm_A           85 SKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWT  124 (279)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTT
T ss_pred             ceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCccccc
Confidence            7889999999999999999999999999999999998765

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.75  E-value=1.2e-17  Score=115.86  Aligned_cols=83  Identities=27%  Similarity=0.372  Sum_probs=72.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                                    ..   .
T Consensus         7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~------------------------------------~~---~   47 (250)
T 2fwm_X            7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------------------------------------QY---P   47 (250)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS------------------------------------CC---S
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh------------------------------------cC---C
Confidence            78999999999999999999999999999999975311                                    11   1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        48 ~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~   89 (250)
T 2fwm_X           48 FATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGA   89 (250)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCC
T ss_pred             ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            567899999999999999999999999999999999876554

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.75  E-value=8.3e-18  Score=117.09  Aligned_cols=83  Identities=29%  Similarity=0.471  Sum_probs=70.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+..                              .+.+     +.+
T Consensus         9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------------------------~~~~-----~~~   53 (257)
T 3tl3_A            9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV------------------------------VADL-----GDR   53 (257)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH------------------------------HHHT-----CTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH------------------------------HHhc-----CCc
Confidence            78999999999999999999999999999999965422                              0111     236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|++++.++++.+.+ ++++|+||||||+..
T Consensus        54 ~~~~~~D~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~   91 (257)
T 3tl3_A           54 ARFAAADVTDEAAVASALDLAET-MGTLRIVVNCAGTGN   91 (257)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHH-HSCEEEEEECGGGSH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCC
Confidence            88899999999999999998877 999999999999864

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.75  E-value=1.2e-17  Score=114.99  Aligned_cols=93  Identities=23%  Similarity=0.330  Sum_probs=74.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ||+++|||+++|||++++++|+++|++|+++ +|+.+...                           +..+.+...  +.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~---------------------------~~~~~~~~~--~~   51 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAE---------------------------EVAEEARRR--GS   51 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHH---------------------------HHHHHHHHT--TC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH---------------------------HHHHHHHhc--CC
Confidence            4899999999999999999999999999998 78765431                           111222221  12


Q ss_pred             eeeE-EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHS-LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~-~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.. +.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~   95 (245)
T 2ph3_A           52 PLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTL   95 (245)
T ss_dssp             SCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBC
T ss_pred             ceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            4555 899999999999999999999999999999999876543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.75  E-value=1.3e-17  Score=116.46  Aligned_cols=89  Identities=21%  Similarity=0.297  Sum_probs=73.8

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||++  +|||+++++.|+++|++|++++|+.+..                            +..+.+....+ 
T Consensus         8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------------------------~~~~~l~~~~~-   58 (261)
T 2wyu_A            8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR----------------------------PEAEKLAEALG-   58 (261)
T ss_dssp             TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGH----------------------------HHHHHHHHHTT-
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH----------------------------HHHHHHHHhcC-
Confidence            7899999999  9999999999999999999999986411                            11122222222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       .+.++++|++|++++.++++++.+++|++|+||||||+..
T Consensus        59 -~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~   98 (261)
T 2wyu_A           59 -GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAP   98 (261)
T ss_dssp             -CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCC
T ss_pred             -CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence             3678899999999999999999999999999999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.75  E-value=1.1e-17  Score=123.85  Aligned_cols=100  Identities=21%  Similarity=0.265  Sum_probs=74.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH-cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA-KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||+++++.|++ .|++|++++|+.+...........|.                ...+....... +.
T Consensus        61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n----------------~~a~~~~~~~~-G~  123 (422)
T 3s8m_A           61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYN----------------SAAFDKHAKAA-GL  123 (422)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHH----------------HHHHHHHHHHT-TC
T ss_pred             CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccch----------------hHHHHHHHHhc-CC
Confidence            78999999999999999999999 99999999997653311000000000                00111111112 33


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhc-CCccEEEeCccc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGV  118 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~lv~nag~  118 (125)
                      ++..+.+|++|++++.++++.+.+++ |+||+||||||+
T Consensus       124 ~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          124 YSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            68889999999999999999999999 999999999997

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.75  E-value=6.7e-18  Score=116.57  Aligned_cols=84  Identities=12%  Similarity=0.091  Sum_probs=73.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               .        ..
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~--------~~   47 (241)
T 1dhr_A            7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------------------------------A--------SA   47 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------------------------------S--------SE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhc-------------------------------c--------CC
Confidence            68999999999999999999999999999999986533                               0        13


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhc--CCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKF--GHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~--g~id~lv~nag~~~~~~~  124 (125)
                      ..++.+|++|++++.++++++.+++  +++|+||||||+....++
T Consensus        48 ~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~   92 (241)
T 1dhr_A           48 SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA   92 (241)
T ss_dssp             EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCT
T ss_pred             cEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCC
Confidence            4667899999999999999999999  799999999998765543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.74  E-value=1.1e-17  Score=115.30  Aligned_cols=86  Identities=30%  Similarity=0.401  Sum_probs=73.1

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||++++++|+++|++|++++|+.+..                              .+.+     + 
T Consensus         1 ~~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~------------------------------~~~~-----~-   44 (239)
T 2ekp_A            1 MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA------------------------------AQSL-----G-   44 (239)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH------------------------------HHHH-----T-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------------------------------HHhh-----C-
Confidence            689999999999999999999999999999999986532                              0111     1 


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                       +..+++|++| +++.++++++.+.++++|+||||||+....++
T Consensus        45 -~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~   86 (239)
T 2ekp_A           45 -AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPA   86 (239)
T ss_dssp             -CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCT
T ss_pred             -cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence             5678999999 99999999999999999999999998766543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.74  E-value=1.6e-17  Score=116.03  Aligned_cols=93  Identities=27%  Similarity=0.453  Sum_probs=75.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec-CchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR-RAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||++++++|+++|++|++++| +.+...                           +..+.+...  +.
T Consensus        21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~---------------------------~~~~~l~~~--~~   71 (274)
T 1ja9_A           21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAE---------------------------EVVAELKKL--GA   71 (274)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHHT--TC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHH---------------------------HHHHHHHhc--CC
Confidence            689999999999999999999999999999999 443321                           111222221  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        72 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~  114 (274)
T 1ja9_A           72 QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD  114 (274)
T ss_dssp             CEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcc
Confidence            6788999999999999999999999999999999999876543

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.74  E-value=1.5e-17  Score=116.49  Aligned_cols=89  Identities=25%  Similarity=0.365  Sum_probs=74.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.....                           ...+.+.   ...+
T Consensus        16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~---~~~~   65 (278)
T 2bgk_A           16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQ---------------------------KVCNNIG---SPDV   65 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHC---CTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHH---------------------------HHHHHhC---CCCc
Confidence            789999999999999999999999999999999865331                           1112221   1126


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++++.++++++|+||||||+..
T Consensus        66 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~  104 (278)
T 2bgk_A           66 ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLS  104 (278)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccC
Confidence            788999999999999999999999999999999999875

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.74  E-value=1.1e-17  Score=118.52  Aligned_cols=83  Identities=33%  Similarity=0.419  Sum_probs=70.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||++++++|+++|++|++++|+.+..                               +.+.... +.+
T Consensus        16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~-~~~   63 (291)
T 3rd5_A           16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG-------------------------------EAAARTM-AGQ   63 (291)
T ss_dssp             TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHTTS-SSE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHh-cCC
Confidence            79999999999999999999999999999999987654                               2222222 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|++++.++++++    +++|+||||||+..
T Consensus        64 ~~~~~~Dl~d~~~v~~~~~~~----~~iD~lv~nAg~~~   98 (291)
T 3rd5_A           64 VEVRELDLQDLSSVRRFADGV----SGADVLINNAGIMA   98 (291)
T ss_dssp             EEEEECCTTCHHHHHHHHHTC----CCEEEEEECCCCCS
T ss_pred             eeEEEcCCCCHHHHHHHHHhc----CCCCEEEECCcCCC
Confidence            899999999999999988865    78999999999875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.74  E-value=2.2e-17  Score=115.38  Aligned_cols=89  Identities=20%  Similarity=0.304  Sum_probs=73.1

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||++  +|||+++++.|+++|++|++++|+.. .                           .+..+.+....+ 
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~---------------------------~~~~~~l~~~~~-   59 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-L---------------------------KGRVEEFAAQLG-   59 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-T---------------------------HHHHHHHHHHTT-
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHH-H---------------------------HHHHHHHHHhcC-
Confidence            5899999999  99999999999999999999999862 2                           111122322222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       ...++++|++|++++.++++++.++++++|+||||||+..
T Consensus        60 -~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~   99 (265)
T 1qsg_A           60 -SDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAP   99 (265)
T ss_dssp             -CCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCC
T ss_pred             -CcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence             2367899999999999999999999999999999999875

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.74  E-value=1.8e-17  Score=121.97  Aligned_cols=101  Identities=20%  Similarity=0.209  Sum_probs=74.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH-cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA-KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||+++++.|++ +|++|++++|+.+...........|.                ........... +.
T Consensus        47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn----------------~~~~~~~~~~~-G~  109 (405)
T 3zu3_A           47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYN----------------SAAFHKFAAQK-GL  109 (405)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHH----------------HHHHHHHHHHT-TC
T ss_pred             CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchh----------------HHHHHHHHHhc-CC
Confidence            78999999999999999999999 99999999987553210000000000                00111111112 33


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++..+.+|++|++++.++++.+.+++|++|+||||||+.
T Consensus       110 ~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          110 YAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCS
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccc
Confidence            678899999999999999999999999999999999985

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.74  E-value=5.4e-18  Score=116.24  Aligned_cols=87  Identities=23%  Similarity=0.345  Sum_probs=70.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |++||||+++|||++++++|+++|++|++++|+.+..                               +.+.... +.++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~-~~~~   49 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-------------------------------STVTNCL-SNNV   49 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH-------------------------------HHHHHTC-SSCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHH-hhcc
Confidence            8999999999999999999999999999999987654                               2222222 2367


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .++.+|+++++++.++++++.+.   .|+||||||+....++
T Consensus        50 ~~~~~D~~~~~~v~~~~~~~~~~---~d~lv~~Ag~~~~~~~   88 (230)
T 3guy_A           50 GYRARDLASHQEVEQLFEQLDSI---PSTVVHSAGSGYFGLL   88 (230)
T ss_dssp             CEEECCTTCHHHHHHHHHSCSSC---CSEEEECCCCCCCSCG
T ss_pred             CeEeecCCCHHHHHHHHHHHhhc---CCEEEEeCCcCCCCcc
Confidence            88999999999999999876543   3999999998876543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.74  E-value=8.5e-18  Score=116.56  Aligned_cols=82  Identities=35%  Similarity=0.498  Sum_probs=70.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +         .
T Consensus        15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~---------~   54 (247)
T 1uzm_A           15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------------------------K---------G   54 (247)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------------------------T---------T
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH-------------------------------H---------H
Confidence            78999999999999999999999999999999976533                               1         0


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +..+.+|++|++++.++++++.++++++|+||||||+....+
T Consensus        55 ~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~   96 (247)
T 1uzm_A           55 LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF   96 (247)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC---
T ss_pred             hcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            113789999999999999999999999999999999876544

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=1.5e-17  Score=114.13  Aligned_cols=81  Identities=27%  Similarity=0.323  Sum_probs=71.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||+++|||++++++|+++|++|++++|+.+ .                                        .
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------------------------------------~   39 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------------------------------------E   39 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------------------------------------S
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------------------------------------c
Confidence            6899999999999999999999999999999999753 1                                        0


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .+.++.+|++|++++.++++++ +.++++|++|||||+....+
T Consensus        40 ~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~~~   81 (242)
T 1uay_A           40 DLIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEK   81 (242)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCC
T ss_pred             ceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccccCccc
Confidence            3467899999999999999999 88899999999999876543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.73  E-value=7.9e-18  Score=118.11  Aligned_cols=82  Identities=32%  Similarity=0.370  Sum_probs=72.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                                        .
T Consensus        28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------------------------------------~   67 (266)
T 3uxy_A           28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------------------------------A   67 (266)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------------------------------------C
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------------------------------h
Confidence            799999999999999999999999999999999765330                                        1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ...+++|++|.+++.++++.+.+++|++|+||||||+....+
T Consensus        68 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~  109 (266)
T 3uxy_A           68 DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGR  109 (266)
T ss_dssp             SEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred             hhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence            133488999999999999999999999999999999987654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.73  E-value=1e-17  Score=115.23  Aligned_cols=84  Identities=15%  Similarity=0.117  Sum_probs=73.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+..                               .        ..
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------------------------------~--------~~   43 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-------------------------------A--------DS   43 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT-------------------------------S--------SE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccc-------------------------------c--------cc
Confidence            78999999999999999999999999999999986533                               0        13


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhc--CCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKF--GHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~--g~id~lv~nag~~~~~~~  124 (125)
                      ..++.+|++|++++.++++++.+++  +++|+||||||+....++
T Consensus        44 ~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~   88 (236)
T 1ooe_A           44 NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA   88 (236)
T ss_dssp             EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCT
T ss_pred             cEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCC
Confidence            4567899999999999999999999  799999999998765443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.72  E-value=3.3e-17  Score=114.20  Aligned_cols=89  Identities=22%  Similarity=0.357  Sum_probs=75.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC---CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG---HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      +|++||||+++|||++++++|+++|   ++|++++|+.+....                            ++.+...  
T Consensus        21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~----------------------------~~~l~~~--   70 (267)
T 1sny_A           21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE----------------------------LEDLAKN--   70 (267)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH----------------------------HHHHHHH--
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH----------------------------HHHhhcc--
Confidence            6899999999999999999999999   999999998764411                            1222222  


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcC--CccEEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFG--HIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--~id~lv~nag~~~  120 (125)
                      +.++.++.+|++|++++.++++++.+.++  ++|+||||||+..
T Consensus        71 ~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~  114 (267)
T 1sny_A           71 HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAP  114 (267)
T ss_dssp             CTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCC
T ss_pred             CCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCC
Confidence            22688899999999999999999999998  8999999999876

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.72  E-value=4e-17  Score=112.96  Aligned_cols=84  Identities=29%  Similarity=0.462  Sum_probs=68.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+. ...  +
T Consensus         6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~-~~~--~   51 (246)
T 2ag5_A            6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-------------------------------QELE-KYP--G   51 (246)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------GGGG-GST--T
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHH-hcc--C
Confidence            78999999999999999999999999999999986544                               2222 111  5


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.+    +.++++++|+||||||+....+
T Consensus        52 ~~~~~~D~~~~~~~~~----~~~~~~~id~lv~~Ag~~~~~~   89 (246)
T 2ag5_A           52 IQTRVLDVTKKKQIDQ----FANEVERLDVLFNVAGFVHHGT   89 (246)
T ss_dssp             EEEEECCTTCHHHHHH----HHHHCSCCSEEEECCCCCCCBC
T ss_pred             ceEEEeeCCCHHHHHH----HHHHhCCCCEEEECCccCCCCC
Confidence            7788999999999874    4456789999999999877654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.72  E-value=3.9e-17  Score=113.16  Aligned_cols=93  Identities=30%  Similarity=0.393  Sum_probs=73.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||+++|||++++++|+++|++|+++ .|+.+..                           .+..+.+...  +.
T Consensus         7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---------------------------~~~~~~~~~~--~~   57 (255)
T 3icc_A            7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA---------------------------EETVYEIQSN--GG   57 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHH---------------------------HHHHHHHHHT--TC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHH---------------------------HHHHHHHHhc--CC
Confidence            7999999999999999999999999999886 4544433                           1222333222  23


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcC------CccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFG------HIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g------~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|.+++.++++.+.+.++      ++|+||||||+....+
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~  106 (255)
T 3icc_A           58 SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAF  106 (255)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBC
T ss_pred             ceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCC
Confidence            788999999999999999999987764      4999999999976654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.70  E-value=6.4e-17  Score=121.23  Aligned_cols=91  Identities=31%  Similarity=0.466  Sum_probs=74.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.....                             ........   .
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~-----------------------------l~~~~~~~---~  260 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAED-----------------------------LKRVADKV---G  260 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH-----------------------------HHHHHHHH---T
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH-----------------------------HHHHHHHc---C
Confidence            789999999999999999999999999999998753210                             11111111   2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCC-ccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGH-IDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~-id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.++++++.+++++ +|+||||||+....++
T Consensus       261 ~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~  304 (454)
T 3u0b_A          261 GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLL  304 (454)
T ss_dssp             CEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCG
T ss_pred             CeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCcc
Confidence            457899999999999999999999986 9999999999877653

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.70  E-value=4e-17  Score=112.91  Aligned_cols=86  Identities=24%  Similarity=0.315  Sum_probs=65.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+...                               .+..... .+
T Consensus        14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------------------------~~~~~~~-~~   61 (249)
T 3f9i_A           14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLK-------------------------------SLGNALK-DN   61 (249)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-------------------------------HHHHHHC-SS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHH-------------------------------HHHHHhc-cC
Confidence            789999999999999999999999999999999876541                               1111111 26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|+++.+++.+++++    ++++|+||||||+....+
T Consensus        62 ~~~~~~D~~~~~~~~~~~~~----~~~id~li~~Ag~~~~~~   99 (249)
T 3f9i_A           62 YTIEVCNLANKEECSNLISK----TSNLDILVCNAGITSDTL   99 (249)
T ss_dssp             EEEEECCTTSHHHHHHHHHT----CSCCSEEEECCC------
T ss_pred             ccEEEcCCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCc
Confidence            77889999999998887764    478999999999887543

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.70  E-value=1e-16  Score=118.92  Aligned_cols=101  Identities=20%  Similarity=0.338  Sum_probs=74.8

Q ss_pred             CcEEEEecCCcchHHH--HHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAA--ILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~--~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||+++|||++  +++.|+++|++|++++|+.............+                ..+.+....... +
T Consensus        60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~-g  122 (418)
T 4eue_A           60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWY----------------NNIFFKEFAKKK-G  122 (418)
T ss_dssp             CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHH----------------HHHHHHHHHHHT-T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccc----------------hHHHHHHHHHHc-C
Confidence            7899999999999999  99999999999999999754321000000000                001112222222 2


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .++..+++|++|++++.++++.+.+++|++|+||||||..
T Consensus       123 ~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          123 LVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             CCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence            3688899999999999999999999999999999999985

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.70  E-value=1.4e-16  Score=120.51  Aligned_cols=97  Identities=24%  Similarity=0.344  Sum_probs=76.6

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |++++||||+++|||+++++.|+++|+ +|++++|+....+..                        .+..+.+...  +
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~------------------------~~l~~~l~~~--g  291 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGA------------------------AELRAELEQL--G  291 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTH------------------------HHHHHHHHHT--T
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHH------------------------HHHHHHHHhc--C
Confidence            579999999999999999999999998 899999975432111                        1222333322  3


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC-CCcCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN-EFAPV  124 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~-~~~~~  124 (125)
                      .++.++.||++|++++.++++++.+. +++|+||||||+. ...++
T Consensus       292 ~~v~~~~~Dvtd~~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~~~l  336 (496)
T 3mje_A          292 VRVTIAACDAADREALAALLAELPED-APLTAVFHSAGVAHDDAPV  336 (496)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHTCCTT-SCEEEEEECCCCCCSCCCT
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHHh-CCCeEEEECCcccCCCCCc
Confidence            48999999999999999999998777 7999999999998 55443

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.69  E-value=9.8e-17  Score=110.89  Aligned_cols=82  Identities=28%  Similarity=0.373  Sum_probs=69.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH-cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA-KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ||++||||+++|||++++++|++ .|+.|++.+|+.+..                                       ..
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------------------------------------~~   44 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------------------------------------AE   44 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------------------------------------CT
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------------------------------------cc
Confidence            68999999999999999999999 789999998875411                                       11


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .+.++++|++|++++.++++.+.  ++++|+||||||+....++
T Consensus        45 ~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~lv~nAg~~~~~~~   86 (244)
T 4e4y_A           45 NLKFIKADLTKQQDITNVLDIIK--NVSFDGIFLNAGILIKGSI   86 (244)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHTT--TCCEEEEEECCCCCCCBCT
T ss_pred             cceEEecCcCCHHHHHHHHHHHH--hCCCCEEEECCccCCCCCc
Confidence            45789999999999999996543  7899999999999876554

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.69  E-value=1.8e-16  Score=109.17  Aligned_cols=85  Identities=31%  Similarity=0.541  Sum_probs=68.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+.....  .
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~--~   53 (244)
T 3d3w_A            7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-------------------------------DSLVRECP--G   53 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHST--T
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHHcC--C
Confidence            68999999999999999999999999999999986543                               11111111  2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ..++.+|++|++++.++++    .++++|+||||||+....+
T Consensus        54 ~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~   91 (244)
T 3d3w_A           54 IEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALLQP   91 (244)
T ss_dssp             CEEEECCTTCHHHHHHHHT----TCCCCCEEEECCCCCCCBC
T ss_pred             CCEEEEeCCCHHHHHHHHH----HcCCCCEEEECCccCCCcc
Confidence            3456999999999888876    5689999999999876543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.68  E-value=1.2e-16  Score=115.16  Aligned_cols=96  Identities=24%  Similarity=0.390  Sum_probs=73.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh-cCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK-ENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   80 (125)
                      +|+++|||+++|||++++++|+++|++|+++.|+.......                        .+..+.... ...+.
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~------------------------~~~~~~~~~~~~~~~   57 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQ------------------------GRLWEAARALACPPG   57 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGT------------------------HHHHHHHHHTTCCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHH------------------------HHHHHHhhhccCCCC
Confidence            68999999999999999999999999999998876543111                        011111110 11123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.+|++|++++.++++++  .++++|+||||||+....+
T Consensus        58 ~~~~~~~Dv~d~~~v~~~~~~~--~~g~iD~lVnnAG~~~~~~   98 (327)
T 1jtv_A           58 SLETLQLDVRDSKSVAAARERV--TEGRVDVLVCNAGLGLLGP   98 (327)
T ss_dssp             SEEEEECCTTCHHHHHHHHHTC--TTSCCSEEEECCCCCCCSC
T ss_pred             ceEEEEecCCCHHHHHHHHHHH--hcCCCCEEEECCCcCCCCc
Confidence            6888999999999999999987  3589999999999876554

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.68  E-value=3.2e-16  Score=107.78  Aligned_cols=85  Identities=31%  Similarity=0.474  Sum_probs=67.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+.....  .
T Consensus         7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~--~   53 (244)
T 1cyd_A            7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL-------------------------------VSLAKECP--G   53 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHST--T
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHHHhcc--C
Confidence            68999999999999999999999999999999986543                               11111111  2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++.+|++|++++.++++    .++++|+||||||+....+
T Consensus        54 ~~~~~~D~~~~~~~~~~~~----~~~~id~vi~~Ag~~~~~~   91 (244)
T 1cyd_A           54 IEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALVIMQP   91 (244)
T ss_dssp             CEEEECCTTCHHHHHHHHT----TCCCCSEEEECCCCCCCBC
T ss_pred             CCcEEecCCCHHHHHHHHH----HcCCCCEEEECCcccCCCC
Confidence            3456999999999888877    5689999999999876543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.67  E-value=2.2e-16  Score=120.23  Aligned_cols=106  Identities=13%  Similarity=0.091  Sum_probs=75.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ++++||||+++|||+++++.|+++|+. |+++ +|+......      .+...        .......+..+.+...  +
T Consensus       251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~------~~~~~--------~~~~~~~~~~~~l~~~--g  314 (525)
T 3qp9_A          251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAE------GTSGA--------AEDSGLAGLVAELADL--G  314 (525)
T ss_dssp             TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC-----------------------------CHHHHHHHHHH--T
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccc------ccccc--------ccCHHHHHHHHHHHhc--C
Confidence            689999999999999999999999997 7777 888542100      00000        0001112333444332  3


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .++.++.||++|++++.++++++. +++++|+||||||+....++
T Consensus       315 ~~v~~~~~Dvtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~  358 (525)
T 3qp9_A          315 ATATVVTCDLTDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPL  358 (525)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCT
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCch
Confidence            479999999999999999999998 78999999999999887654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.67  E-value=3.9e-16  Score=112.17  Aligned_cols=90  Identities=23%  Similarity=0.347  Sum_probs=70.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC---------chhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHH
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR---------AEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDA   72 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
                      ||++||||+++|||+++++.|+++|++|++.++.         .+..                           +...+.
T Consensus         9 gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~---------------------------~~~~~~   61 (319)
T 1gz6_A            9 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAA---------------------------DKVVEE   61 (319)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHH---------------------------HHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHH---------------------------HHHHHH
Confidence            7899999999999999999999999999997653         2222                           111122


Q ss_pred             HhhcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          73 MAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        73 ~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.... . .   ..+|+++.+++.++++++.++++++|+||||||+....+
T Consensus        62 l~~~~-~-~---~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~  107 (319)
T 1gz6_A           62 IRRRG-G-K---AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRS  107 (319)
T ss_dssp             HHHTT-C-E---EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCC
T ss_pred             HHhhC-C-e---EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence            22221 1 2   357999999999999999999999999999999887654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.65  E-value=4.3e-16  Score=108.28  Aligned_cols=86  Identities=23%  Similarity=0.360  Sum_probs=66.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |++||||+++|||+++++.|+++|++|++++|+.+.....                            ..+.....  ++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~----------------------------~~l~~~~~--~~   51 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL----------------------------EAFAETYP--QL   51 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH----------------------------HHHHHHCT--TS
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----------------------------HHHHhcCC--cE
Confidence            8999999999999999999999999999999987644211                            11211111  23


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC-CCcC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN-EFAP  123 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~-~~~~  123 (125)
                      ..+     |++++.++++++.++++++|+||||||+. ...+
T Consensus        52 ~~~-----d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~   88 (254)
T 1zmt_A           52 KPM-----SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQP   88 (254)
T ss_dssp             EEC-----CCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCC
T ss_pred             EEE-----CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCC
Confidence            322     77888899999999999999999999987 4433

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.64  E-value=6.8e-16  Score=119.16  Aligned_cols=100  Identities=22%  Similarity=0.283  Sum_probs=69.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++.+|+......               +..   ....++..+++...  +.+
T Consensus         8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~---------------gr~---~~~~~~~~~~i~~~--g~~   67 (604)
T 2et6_A            8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQ---------------GGN---SKAADVVVDEIVKN--GGV   67 (604)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------------------------CHHHHHHHHHHHT--TCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcccccc---------------ccc---hHHHHHHHHHHHhc--CCe
Confidence            7999999999999999999999999999999886411000               000   00001111222222  113


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +   .+|++|.+++.++++++.+++|++|+||||||+....++
T Consensus        68 ~---~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~  107 (604)
T 2et6_A           68 A---VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASM  107 (604)
T ss_dssp             E---EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred             E---EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            2   358888888999999999999999999999999876654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.64  E-value=2.2e-16  Score=113.70  Aligned_cols=99  Identities=17%  Similarity=0.265  Sum_probs=69.9

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh--cC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK--EN   77 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   77 (125)
                      +|++||||+++  |||++++++|+++|++|++.++++......    +..     +..          +.......  ..
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~----r~~-----~~~----------~~~~~~~~~~~~   62 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFM----KNY-----KNG----------KFDNDMIIDKDK   62 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHH----HHH-----HTT----------TTTGGGBCSSSC
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccc----cch-----HHH----------HHHHHHHHhhcc
Confidence            68999999975  999999999999999999888765210000    000     000          00000100  11


Q ss_pred             CCceeeEEEecCCCh--H------------------HHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          78 PDWKVHSLKVDVTKD--A------------------EVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        78 ~~~~~~~~~~Dv~~~--~------------------~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ....+..+++|+++.  +                  ++.++++++.+++|++|+||||||+.
T Consensus        63 ~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~  124 (329)
T 3lt0_A           63 KMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANA  124 (329)
T ss_dssp             BCCEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             cccccccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCccc
Confidence            112467888888888  7                  99999999999999999999999985

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.64  E-value=1e-15  Score=118.17  Aligned_cols=90  Identities=22%  Similarity=0.380  Sum_probs=69.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++.++....                             +..+.+...  +.+
T Consensus       322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~-----------------------------~~~~~i~~~--g~~  370 (604)
T 2et6_A          322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDAT-----------------------------KTVDEIKAA--GGE  370 (604)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH-----------------------------HHHHHHHHT--TCE
T ss_pred             CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHH-----------------------------HHHHHHHhc--CCe
Confidence            7999999999999999999999999999998863221                             111222221  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +..+.+|++  ++..++++.+.+++|++|+||||||+....++
T Consensus       371 ~~~~~~Dv~--~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~  411 (604)
T 2et6_A          371 AWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSF  411 (604)
T ss_dssp             EEEECCCHH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred             EEEEEcChH--HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCh
Confidence            777788883  45677889999999999999999999876654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.63  E-value=7e-16  Score=119.24  Aligned_cols=100  Identities=20%  Similarity=0.289  Sum_probs=60.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|........                  ......+...+.+.....  .
T Consensus        19 gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~------------------~~~~~~~~~~~~i~~~~~--~   78 (613)
T 3oml_A           19 GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDG------------------ASQRAADIVVDEIRKAGG--E   78 (613)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------------------------CHHHHHHHHHHTTC--C
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCccccccc------------------CCHHHHHHHHHHHHHhCC--e
Confidence            89999999999999999999999999999998832210000                  000001122233332221  2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                         ..+|++|.+++.++++++.+++|++|+||||||+....++
T Consensus        79 ---~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~  118 (613)
T 3oml_A           79 ---AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSL  118 (613)
T ss_dssp             ---EEECCCCGGGHHHHHC----------CEECCCCCCCCCCS
T ss_pred             ---EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCc
Confidence               3479999999999999999999999999999999877654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.63  E-value=5.3e-16  Score=107.27  Aligned_cols=82  Identities=23%  Similarity=0.178  Sum_probs=64.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEe-e--cCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGF-A--RRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      ||+++|||+++|||+++++.|+++|++|+++ +  |+.+..                               +.+.....
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~-------------------------------~~~~~~~~   49 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAER-------------------------------QRFESENP   49 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH-------------------------------HHHHHHST
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHH-------------------------------HHHHHHhC
Confidence            5899999999999999999999999999999 6  876544                               11111111


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +       .|+.|++++.++++++.++++++|+||||||+...
T Consensus        50 ~-------~~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~   85 (244)
T 1zmo_A           50 G-------TIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRP   85 (244)
T ss_dssp             T-------EEECCCCCGGGHHHHHGGGSSCEEEEEECCCCCTT
T ss_pred             C-------CcccCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC
Confidence            1       12337888889999999999999999999998766

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.63  E-value=1.7e-15  Score=124.70  Aligned_cols=94  Identities=21%  Similarity=0.382  Sum_probs=75.2

Q ss_pred             CcEEEEecCCcc-hHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcC--
Q psy7029           2 SKIIVVTGASVG-IGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKEN--   77 (125)
Q Consensus         2 ~~~~lItG~~~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   77 (125)
                      ||++|||||++| ||+++++.|+++|++|+++ .|+.+...                           +..+.+....  
T Consensus       476 GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~le---------------------------e~a~eL~ael~a  528 (1688)
T 2pff_A          476 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVT---------------------------DYYQSIYAKYGA  528 (1688)
T ss_dssp             SCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTT---------------------------THHHHTTTTTCC
T ss_pred             CCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHH---------------------------HHHHHHHHHhhc
Confidence            789999999998 9999999999999999998 56544331                           1112222221  


Q ss_pred             CCceeeEEEecCCChHHHHHHHHHHHhh-----cC-CccEEEeCcccCCCc
Q psy7029          78 PDWKVHSLKVDVTKDAEVVEAFDWINNK-----FG-HIDVMINNAGVNEFA  122 (125)
Q Consensus        78 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-----~g-~id~lv~nag~~~~~  122 (125)
                      .+.++.++++|++|++++.++++++.++     +| ++|+||||||+....
T Consensus       529 ~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g  579 (1688)
T 2pff_A          529 KGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQG  579 (1688)
T ss_dssp             TTCEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCS
T ss_pred             CCCeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCC
Confidence            1347889999999999999999999988     77 999999999987655

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.63  E-value=2.6e-15  Score=125.79  Aligned_cols=94  Identities=22%  Similarity=0.358  Sum_probs=74.9

Q ss_pred             CcEEEEecCCcc-hHHHHHHHHHHcCCeEEEee-cCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc--C
Q psy7029           2 SKIIVVTGASVG-IGAAILRALAAKGHQVIGFA-RRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE--N   77 (125)
Q Consensus         2 ~~~~lItG~~~g-iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   77 (125)
                      ||++||||+++| ||+++++.|+++|++|++++ |+.....                           ...+.+...  .
T Consensus       652 gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~---------------------------~~a~eL~~el~~  704 (1878)
T 2uv9_A          652 GKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVT---------------------------EYYQGIYARCGA  704 (1878)
T ss_dssp             TCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHH---------------------------HHHHHHHHHHCC
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHH---------------------------HHHHHHHHHhhc
Confidence            789999999999 99999999999999999986 4443321                           111222111  1


Q ss_pred             CCceeeEEEecCCChHHHHHHHHHHHhh---cC-CccEEEeCcccCCCc
Q psy7029          78 PDWKVHSLKVDVTKDAEVVEAFDWINNK---FG-HIDVMINNAGVNEFA  122 (125)
Q Consensus        78 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~---~g-~id~lv~nag~~~~~  122 (125)
                      .+.++.++.||++|++++.++++.+.++   +| ++|+||||||+....
T Consensus       705 ~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~  753 (1878)
T 2uv9_A          705 RGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENG  753 (1878)
T ss_dssp             TTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTT
T ss_pred             cCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCC
Confidence            2347889999999999999999999998   89 999999999998664

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.62  E-value=2.4e-15  Score=126.11  Aligned_cols=94  Identities=21%  Similarity=0.386  Sum_probs=74.9

Q ss_pred             CcEEEEecCCcc-hHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc--C
Q psy7029           2 SKIIVVTGASVG-IGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE--N   77 (125)
Q Consensus         2 ~~~~lItG~~~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   77 (125)
                      ||++||||+++| ||+++++.|+++|++|+++ .|+.+...                           +..+.+...  .
T Consensus       675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~---------------------------~~~~eL~~~~~~  727 (1887)
T 2uv8_A          675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVT---------------------------DYYQSIYAKYGA  727 (1887)
T ss_dssp             TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHH---------------------------HHHHHHHHHHCC
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHH---------------------------HHHHHHHHHhhc
Confidence            789999999998 9999999999999999998 46554331                           111222111  1


Q ss_pred             CCceeeEEEecCCChHHHHHHHHHHHhh-----cC-CccEEEeCcccCCCc
Q psy7029          78 PDWKVHSLKVDVTKDAEVVEAFDWINNK-----FG-HIDVMINNAGVNEFA  122 (125)
Q Consensus        78 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-----~g-~id~lv~nag~~~~~  122 (125)
                      .+.++.++.+|++|++++.++++.+.++     +| ++|+||||||+....
T Consensus       728 ~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~  778 (1887)
T 2uv8_A          728 KGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQG  778 (1887)
T ss_dssp             TTCEEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCS
T ss_pred             CCCeEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCC
Confidence            1347889999999999999999999988     66 999999999997654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.61  E-value=1.5e-15  Score=103.70  Aligned_cols=65  Identities=29%  Similarity=0.467  Sum_probs=59.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+.+                                            
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------------------------------   41 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------------------------------   41 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------------------------------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------------------------------
Confidence            789999999999999999999999999999988531                                            


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                           +|++|++++.++++++    +++|+||||||+.
T Consensus        42 -----~D~~~~~~v~~~~~~~----g~id~lv~nAg~~   70 (223)
T 3uce_A           42 -----LDISDEKSVYHYFETI----GAFDHLIVTAGSY   70 (223)
T ss_dssp             -----CCTTCHHHHHHHHHHH----CSEEEEEECCCCC
T ss_pred             -----cCCCCHHHHHHHHHHh----CCCCEEEECCCCC
Confidence                 7999999999988764    8999999999987

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.61  E-value=2.4e-15  Score=119.21  Aligned_cols=96  Identities=21%  Similarity=0.317  Sum_probs=77.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHH-HcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALA-AKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +++++|||+++|||++++++|+ ++|+ +|++++|+....+..                        ++..+++...  +
T Consensus       530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~------------------------~~~~~~l~~~--G  583 (795)
T 3slk_A          530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGA------------------------AELVAQLTAY--G  583 (795)
T ss_dssp             TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTH------------------------HHHHHHHHHT--T
T ss_pred             ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHH------------------------HHHHHHHHhc--C
Confidence            7899999999999999999999 7999 599999985433111                        2223444332  3


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .++.+++||++|++++.++++++.+.+ +||+||||||+..+.++
T Consensus       584 ~~v~~~~~Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~~~~~  627 (795)
T 3slk_A          584 AEVSLQACDVADRETLAKVLASIPDEH-PLTAVVHAAGVLDDGVS  627 (795)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCCCCCG
T ss_pred             CcEEEEEeecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCCCCch
Confidence            489999999999999999999998876 99999999999887654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.61  E-value=3.2e-15  Score=112.89  Aligned_cols=95  Identities=21%  Similarity=0.253  Sum_probs=75.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++++||||+++|||++++++|+++|+. |++++|+....+.                        ..+..+.+...  +.
T Consensus       226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~------------------------~~~l~~~l~~~--g~  279 (486)
T 2fr1_A          226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADG------------------------AGELVAELEAL--GA  279 (486)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTT------------------------HHHHHHHHHHT--TC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHH------------------------HHHHHHHHHhc--CC
Confidence            689999999999999999999999995 9999998642210                        01122333322  34


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.||++|++++.++++.+ ..++++|+||||||+....+
T Consensus       280 ~v~~~~~Dv~d~~~v~~~~~~i-~~~g~ld~VIh~AG~~~~~~  321 (486)
T 2fr1_A          280 RTTVAACDVTDRESVRELLGGI-GDDVPLSAVFHAAATLDDGT  321 (486)
T ss_dssp             EEEEEECCTTCHHHHHHHHHTS-CTTSCEEEEEECCCCCCCCC
T ss_pred             EEEEEEeCCCCHHHHHHHHHHH-HhcCCCcEEEECCccCCCCc
Confidence            7889999999999999999998 56789999999999987654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.61  E-value=2.9e-15  Score=109.77  Aligned_cols=102  Identities=18%  Similarity=0.140  Sum_probs=75.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHH-HcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALA-AKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|+|++++..|+ +.|+.++++.+..+..+........+.                ...+....... +.
T Consensus        50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~----------------~~a~~~~i~~~-G~  112 (401)
T 4ggo_A           50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYN----------------NLAFDEAAKRE-GL  112 (401)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHH----------------HHHHHHHHHHH-TC
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchh----------------HHHHHHHHHHc-CC
Confidence            5899999999999999999999 689999999887553311000000000                01111221121 33


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ....+.||+++++++.++++++.+++|+||+||||+|...
T Consensus       113 ~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~  152 (401)
T 4ggo_A          113 YSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPV  152 (401)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSE
T ss_pred             CceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEeccccc
Confidence            7889999999999999999999999999999999999763

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.61  E-value=3e-15  Score=129.85  Aligned_cols=93  Identities=20%  Similarity=0.365  Sum_probs=74.4

Q ss_pred             CcEEEEecCCcc-hHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVG-IGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ||++||||+++| ||+++++.|+++|++|++++|+.+....  ..                    .++..+.+.  ..+.
T Consensus      2136 gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~--~~--------------------~~~l~~~l~--~~G~ 2191 (3089)
T 3zen_D         2136 DEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRL--AF--------------------YKQLYRDHA--RFDA 2191 (3089)
T ss_dssp             CCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHH--HH--------------------HHHHHHHHC--CTTC
T ss_pred             CCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhh--HH--------------------HHHHHHHHh--hcCC
Confidence            799999999999 9999999999999999999998654100  00                    011112221  1234


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHh----hcCCccEEEeCccc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINN----KFGHIDVMINNAGV  118 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~----~~g~id~lv~nag~  118 (125)
                      ++..+++|++|++++.++++++.+    ++|++|+||||||+
T Consensus      2192 ~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2192 TLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCC
T ss_pred             eEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCc
Confidence            788999999999999999999998    89999999999998

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.60  E-value=3.7e-16  Score=107.98  Aligned_cols=87  Identities=29%  Similarity=0.397  Sum_probs=63.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++|||||++|||++++++|++ |+.|++++|+.+..                               +.+.. .  .+
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~-------------------------------~~~~~-~--~~   49 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHL-------------------------------AALAE-I--EG   49 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHH-------------------------------HHHHT-S--TT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHH-------------------------------HHHHh-h--cC
Confidence            79999999999999999999998 99999999987644                               22222 1  15


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|+++.+. .+.+.+..+.++++|+||||||+....++
T Consensus        50 ~~~~~~D~~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~~~~~   91 (245)
T 3e9n_A           50 VEPIESDIVKEVL-EEGGVDKLKNLDHVDTLVHAAAVARDTTI   91 (245)
T ss_dssp             EEEEECCHHHHHH-TSSSCGGGTTCSCCSEEEECC--------
T ss_pred             CcceecccchHHH-HHHHHHHHHhcCCCCEEEECCCcCCCCch
Confidence            7788999998877 55555566778999999999999876543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.59  E-value=2.9e-15  Score=100.62  Aligned_cols=81  Identities=26%  Similarity=0.420  Sum_probs=65.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++|||+++|||++++++|+++  +|++++|+.+..                               +.+......   
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~-------------------------------~~~~~~~~~---   44 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGAL-------------------------------AELAREVGA---   44 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHH-------------------------------HHHHHHHTC---
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHH-------------------------------HHHHHhccC---
Confidence            57999999999999999999998  999999986543                               111111111   


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .++.+|++|++++.+++++    ++++|+||||||+....+
T Consensus        45 ~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~   81 (207)
T 2yut_A           45 RALPADLADELEAKALLEE----AGPLDLLVHAVGKAGRAS   81 (207)
T ss_dssp             EECCCCTTSHHHHHHHHHH----HCSEEEEEECCCCCCCBC
T ss_pred             cEEEeeCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCC
Confidence            6778999999999999887    689999999999876544

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.59  E-value=6.7e-15  Score=99.98  Aligned_cols=78  Identities=15%  Similarity=0.172  Sum_probs=64.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHH-HcCCeEEEeecCch-hhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALA-AKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~-~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      |+|+++|||++++||+++++.|+ ++|++|++++|+.+ ..                               +.+...  
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~-------------------------------~~~~~~--   50 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI-------------------------------PPEIID--   50 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS-------------------------------CHHHHT--
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc-------------------------------hhhccC--
Confidence            56889999999999999999999 89999999999865 43                               222111  


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCccc
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV  118 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~  118 (125)
                      ...+.++.+|++|++++.++++       ++|+||||+|.
T Consensus        51 ~~~~~~~~~D~~d~~~~~~~~~-------~~d~vv~~ag~   83 (221)
T 3r6d_A           51 HERVTVIEGSFQNPGXLEQAVT-------NAEVVFVGAME   83 (221)
T ss_dssp             STTEEEEECCTTCHHHHHHHHT-------TCSEEEESCCC
T ss_pred             CCceEEEECCCCCHHHHHHHHc-------CCCEEEEcCCC
Confidence            1267889999999999988886       68999999985

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.58  E-value=3.5e-15  Score=104.32  Aligned_cols=76  Identities=16%  Similarity=0.107  Sum_probs=66.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||+++++.|+++|++|++++|+....                                      ...+
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~--------------------------------------~~~~   44 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDP--------------------------------------AGPN   44 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCC--------------------------------------CCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccc--------------------------------------cCCC
Confidence            68999999999999999999999999999999986533                                      0236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++.+|++|++++.++++       ++|+||||||+....
T Consensus        45 ~~~~~~Dl~d~~~~~~~~~-------~~D~vi~~Ag~~~~~   78 (267)
T 3rft_A           45 EECVQCDLADANAVNAMVA-------GCDGIVHLGGISVEK   78 (267)
T ss_dssp             EEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCSCC
T ss_pred             CEEEEcCCCCHHHHHHHHc-------CCCEEEECCCCcCcC
Confidence            7889999999999998887       699999999986544

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.58  E-value=8.8e-16  Score=106.41  Aligned_cols=73  Identities=27%  Similarity=0.448  Sum_probs=61.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+++|||+++|||+++++.|+++|++|++++|+.+..                               +       .   
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------------------------------~-------~---   40 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-------------------------------I-------A---   40 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-------------------------------E-------C---
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhh-------------------------------c-------c---
Confidence            8999999999999999999999999999999986533                               0       0   


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      . +++|++|++++.++++++   .+++|+||||||+..
T Consensus        41 ~-~~~Dl~~~~~v~~~~~~~---~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A           41 D-LSTAEGRKQAIADVLAKC---SKGMDGLVLCAGLGP   74 (257)
T ss_dssp             C-TTSHHHHHHHHHHHHTTC---TTCCSEEEECCCCCT
T ss_pred             c-cccCCCCHHHHHHHHHHh---CCCCCEEEECCCCCC
Confidence            1 578999999988887732   389999999999876

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.57  E-value=3.3e-14  Score=107.95  Aligned_cols=91  Identities=22%  Similarity=0.257  Sum_probs=71.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++++||||+++|||+.++++|+++|+ +|++++|+....+.                        ..+..+.+..  .+.
T Consensus       259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~------------------------~~~l~~~l~~--~g~  312 (511)
T 2z5l_A          259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPG------------------------AAELAEELRG--HGC  312 (511)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTT------------------------HHHHHHHHHT--TTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHH------------------------HHHHHHHHHh--cCC
Confidence            68999999999999999999999999 69999998642210                        0122233332  234


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      ++.++.||++|++++.++++.     +++|+||||||+....+
T Consensus       313 ~v~~~~~Dvtd~~~v~~~~~~-----~~ld~VVh~AGv~~~~~  350 (511)
T 2z5l_A          313 EVVHAACDVAERDALAALVTA-----YPPNAVFHTAGILDDAV  350 (511)
T ss_dssp             EEEEEECCSSCHHHHHHHHHH-----SCCSEEEECCCCCCCBC
T ss_pred             EEEEEEeCCCCHHHHHHHHhc-----CCCcEEEECCcccCCcc
Confidence            789999999999999999887     78999999999987654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.56  E-value=8.8e-15  Score=101.51  Aligned_cols=78  Identities=26%  Similarity=0.358  Sum_probs=61.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..                               +.+     + .
T Consensus        19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------------------------------~~~-----~-~   61 (249)
T 1o5i_A           19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL-------------------------------KRS-----G-H   61 (249)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHT-----C-S
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-------------------------------Hhh-----C-C
Confidence            78999999999999999999999999999999986322                               111     1 4


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      +.++ +|+  .+++.++++.+    .++|+||||||+....+
T Consensus        62 ~~~~-~D~--~~~~~~~~~~~----~~iD~lv~~Ag~~~~~~   96 (249)
T 1o5i_A           62 RYVV-CDL--RKDLDLLFEKV----KEVDILVLNAGGPKAGF   96 (249)
T ss_dssp             EEEE-CCT--TTCHHHHHHHS----CCCSEEEECCCCCCCBC
T ss_pred             eEEE-eeH--HHHHHHHHHHh----cCCCEEEECCCCCCCCC
Confidence            5666 999  55667766654    38999999999876543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.56  E-value=2e-14  Score=102.98  Aligned_cols=86  Identities=23%  Similarity=0.212  Sum_probs=68.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|||||+++||++++++|+++|++|++++|+.....                           ...+.+.... +..
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~~~-~~~   56 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKR---------------------------EAIARIEKIT-GKT   56 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCT---------------------------HHHHHHHHHH-SCC
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchH---------------------------HHHHHHHhhc-CCC
Confidence            579999999999999999999999999999999765431                           1112221111 125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++.     +++|+||||||+..
T Consensus        57 ~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~   90 (341)
T 3enk_A           57 PAFHETDVSDERALARIFDA-----HPITAAIHFAALKA   90 (341)
T ss_dssp             CEEECCCTTCHHHHHHHHHH-----SCCCEEEECCCCCC
T ss_pred             ceEEEeecCCHHHHHHHHhc-----cCCcEEEECccccc
Confidence            77889999999999999886     58999999999864

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.55  E-value=1.4e-14  Score=103.60  Aligned_cols=99  Identities=19%  Similarity=0.194  Sum_probs=64.6

Q ss_pred             CcEEEEecC--CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||+  ++|||+++++.|+++|++|++++|++...... ....                   ....+.+.....+
T Consensus         9 gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~-~~~~-------------------~~~~~~~~~~~~~   68 (315)
T 2o2s_A            9 GQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQ-KSLQ-------------------SGRLDEDRKLPDG   68 (315)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHH-HHHH-------------------HTTTHHHHBCTTS
T ss_pred             CCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhh-hhhh-------------------hhhhhhhhhhhcc
Confidence            689999999  89999999999999999999999864210000 0000                   0000111000000


Q ss_pred             c---eeeEEE------------ecCC--------ChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 W---KVHSLK------------VDVT--------KDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~---~~~~~~------------~Dv~--------~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .   .+.++.            +|++        |++++.++++++.+++|++|+||||||+..
T Consensus        69 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~  132 (315)
T 2o2s_A           69 SLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGP  132 (315)
T ss_dssp             CBCCCSCEEECCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCT
T ss_pred             ccccccccccccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            0   012333            3444        367899999999999999999999999763

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.53  E-value=2.5e-14  Score=98.20  Aligned_cols=77  Identities=22%  Similarity=0.206  Sum_probs=64.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+|+++|||++++||+++++.|+++| ++|++++|+.+..                               ..+    ..
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~-------------------------------~~~----~~   66 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI-------------------------------HKP----YP   66 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS-------------------------------CSS----CC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh-------------------------------ccc----cc
Confidence            46899999999999999999999999 8999999987643                               111    11


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ..+.++.+|++|++++.++++       .+|+||||+|..
T Consensus        67 ~~~~~~~~Dl~d~~~~~~~~~-------~~D~vv~~a~~~   99 (236)
T 3qvo_A           67 TNSQIIMGDVLNHAALKQAMQ-------GQDIVYANLTGE   99 (236)
T ss_dssp             TTEEEEECCTTCHHHHHHHHT-------TCSEEEEECCST
T ss_pred             CCcEEEEecCCCHHHHHHHhc-------CCCEEEEcCCCC
Confidence            257889999999999998887       689999999863

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.52  E-value=4.9e-14  Score=94.39  Aligned_cols=69  Identities=28%  Similarity=0.524  Sum_probs=60.6

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||+++|||++++++|+ +|++|++++|+..                                              
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------------------------------   37 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------------------------------   37 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------------------------------
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------------------------------
Confidence            79999999999999999999 9999999998631                                              


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                      .+.+|++|++++.++++.+    +++|+||||||+....+
T Consensus        38 ~~~~D~~~~~~~~~~~~~~----~~~d~vi~~ag~~~~~~   73 (202)
T 3d7l_A           38 DVTVDITNIDSIKKMYEQV----GKVDAIVSATGSATFSP   73 (202)
T ss_dssp             SEECCTTCHHHHHHHHHHH----CCEEEEEECCCCCCCCC
T ss_pred             ceeeecCCHHHHHHHHHHh----CCCCEEEECCCCCCCCC
Confidence            3689999999999988864    78999999999876543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.51  E-value=4.8e-14  Score=99.85  Aligned_cols=102  Identities=19%  Similarity=0.247  Sum_probs=64.2

Q ss_pred             CcEEEEecCC--cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||++  +|||+++++.|+++|++|++++|++.......       .. ....        .++ .+.+......
T Consensus         8 ~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~-~~~~--------~~~-~~~~~~~~~~   70 (297)
T 1d7o_A            8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFET-------SL-RRGK--------FDQ-SRVLPDGSLM   70 (297)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHH-------HH-HTTT--------TTG-GGBCTTSSBC
T ss_pred             CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhh-------hh-hhhH--------hhh-hhhhcccccc
Confidence            7899999999  99999999999999999999987632110000       00 0000        000 0111000000


Q ss_pred             ceeeEEEec--------C----CC--------hHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVD--------V----TK--------DAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~D--------v----~~--------~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .....+.+|        +    +|        ++++.++++++.+++|++|+||||||+..
T Consensus        71 ~~~~~~~~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~  131 (297)
T 1d7o_A           71 EIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGP  131 (297)
T ss_dssp             CEEEEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCT
T ss_pred             ccccccccceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCc
Confidence            012233332        2    22        67899999999999999999999999753

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.51  E-value=1.5e-14  Score=99.58  Aligned_cols=73  Identities=34%  Similarity=0.513  Sum_probs=62.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |++||||+++|||++++++|+++|++|++++|+.+..                               +       .   
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------------------------~-------~---   40 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADI-------------------------------E-------A---   40 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-------------------------------E-------C---
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHc-------------------------------c-------c---
Confidence            8999999999999999999999999999999986532                               0       0   


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       .+.+|+++++++.++++++   .+++|+||||||+..
T Consensus        41 -~~~~D~~~~~~~~~~~~~~---~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A           41 -DLSTPGGRETAVAAVLDRC---GGVLDGLVCCAGVGV   74 (255)
T ss_dssp             -CTTSHHHHHHHHHHHHHHH---TTCCSEEEECCCCCT
T ss_pred             -cccCCcccHHHHHHHHHHc---CCCccEEEECCCCCC
Confidence             1568999999998888754   378999999999876

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.51  E-value=3.5e-14  Score=101.61  Aligned_cols=35  Identities=34%  Similarity=0.355  Sum_probs=32.6

Q ss_pred             CcEEEEecC--CcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~--~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      +|++||||+  ++|||+++++.|+++|++|++++|++
T Consensus         9 ~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~   45 (319)
T 2ptg_A            9 GKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPP   45 (319)
T ss_dssp             TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccc
Confidence            689999999  89999999999999999999998763

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.50  E-value=9.8e-14  Score=119.82  Aligned_cols=96  Identities=18%  Similarity=0.167  Sum_probs=72.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|++||||+++|||+++++.|+++|++ |++++|+....+..                        .+..+.+...  +.
T Consensus      1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~------------------------~~~~~~l~~~--g~ 1937 (2512)
T 2vz8_A         1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQ------------------------ARQVREWRRQ--GV 1937 (2512)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHH------------------------HHHHHHHHHT--TC
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHH------------------------HHHHHHHHhC--CC
Confidence            689999999999999999999999996 88889986533111                        1112233222  34


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++..+.||++|++++.++++++. ++|+||+||||||+....++
T Consensus      1938 ~v~~~~~Dvsd~~~v~~~~~~~~-~~g~id~lVnnAgv~~~~~~ 1980 (2512)
T 2vz8_A         1938 QVLVSTSNASSLDGARSLITEAT-QLGPVGGVFNLAMVLRDAVL 1980 (2512)
T ss_dssp             EEEEECCCSSSHHHHHHHHHHHH-HHSCEEEEEECCCC------
T ss_pred             EEEEEecCCCCHHHHHHHHHHHH-hcCCCcEEEECCCcCCCCch
Confidence            78899999999999999999987 47999999999999866543

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.49  E-value=1.1e-13  Score=99.43  Aligned_cols=93  Identities=17%  Similarity=0.201  Sum_probs=66.8

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||++|+||.++++.|+++|++|++++|+....-                +     .....+..+.+.... +.
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r----------------~-----~~~~~~~~~~l~~~~-~~   58 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFR----------------G-----GGSLPESLRRVQELT-GR   58 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCB----------------C-----SSSSBHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccc----------------c-----ccccHHHHHHHHhcc-CC
Confidence            8899999999999999999999999999999998643200                0     000001112221111 12


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|++|++++.++++..     ++|+||||||...
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~-----~~d~vih~A~~~~   93 (348)
T 1ek6_A           59 SVEFEEMDILDQGALQRLFKKY-----SFMAVIHFAGLKA   93 (348)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHC-----CEEEEEECCSCCC
T ss_pred             ceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCcC
Confidence            5778899999999998888752     7999999999764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.49  E-value=1.7e-13  Score=98.00  Aligned_cols=85  Identities=20%  Similarity=0.238  Sum_probs=67.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++||||+|+||.+++++|+++|++|++++|+......                          ...+.+   ....+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--------------------------~~~~~~---~~~~~   53 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--------------------------WRLKEL---GIEND   53 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--------------------------HHHHHT---TCTTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--------------------------ccHhhc---cccCc
Confidence            6899999999999999999999999999999998653310                          001111   11225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++..     ++|+||||||...
T Consensus        54 ~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~   87 (345)
T 2z1m_A           54 VKIIHMDLLEFSNIIRTIEKV-----QPDEVYNLAAQSF   87 (345)
T ss_dssp             EEECCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             eeEEECCCCCHHHHHHHHHhc-----CCCEEEECCCCcc
Confidence            778899999999999998865     6899999999764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.49  E-value=8.6e-14  Score=95.32  Aligned_cols=76  Identities=20%  Similarity=0.332  Sum_probs=61.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||++++||++++++|+++|++|++++|+.+..                               +.+...    .
T Consensus        21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~-------------------------------~~~~~~----~   65 (236)
T 3e8x_A           21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG-------------------------------PELRER----G   65 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-------------------------------HHHHHT----T
T ss_pred             CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH-------------------------------HHHHhC----C
Confidence            78999999999999999999999999999999987654                               222211    4


Q ss_pred             e-eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 V-HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~-~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      + .++.+|++         +.+.+.++++|+||||||...+
T Consensus        66 ~~~~~~~Dl~---------~~~~~~~~~~D~vi~~ag~~~~   97 (236)
T 3e8x_A           66 ASDIVVANLE---------EDFSHAFASIDAVVFAAGSGPH   97 (236)
T ss_dssp             CSEEEECCTT---------SCCGGGGTTCSEEEECCCCCTT
T ss_pred             CceEEEcccH---------HHHHHHHcCCCEEEECCCCCCC
Confidence            5 78899999         3344456689999999998754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.48  E-value=2.3e-13  Score=97.40  Aligned_cols=82  Identities=16%  Similarity=0.197  Sum_probs=66.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|||||+|+||+++++.|+++|++|++++|+....                               .......  .+
T Consensus        20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------------------------~~~~~~l--~~   66 (330)
T 2pzm_A           20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGK-------------------------------REVLPPV--AG   66 (330)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSC-------------------------------GGGSCSC--TT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccc-------------------------------hhhhhcc--CC
Confidence            67999999999999999999999999999999965422                               0000111  25


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|++++.++++++     ++|+||||||....
T Consensus        67 v~~~~~Dl~d~~~~~~~~~~~-----~~D~vih~A~~~~~  101 (330)
T 2pzm_A           67 LSVIEGSVTDAGLLERAFDSF-----KPTHVVHSAAAYKD  101 (330)
T ss_dssp             EEEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCSC
T ss_pred             ceEEEeeCCCHHHHHHHHhhc-----CCCEEEECCccCCC
Confidence            778899999999999988865     79999999998653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.48  E-value=1.7e-13  Score=93.06  Aligned_cols=77  Identities=29%  Similarity=0.296  Sum_probs=63.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||+++++.|+++|++|++++|+....                               ..+     ...
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------------------------~~~-----~~~   47 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI-------------------------------KIE-----NEH   47 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC-------------------------------CCC-----CTT
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc-------------------------------hhc-----cCc
Confidence            47899999999999999999999999999999987643                               111     126


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|++++.++++       ++|+||||||....
T Consensus        48 ~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~~   80 (227)
T 3dhn_A           48 LKVKKADVSSLDEVCEVCK-------GADAVISAFNPGWN   80 (227)
T ss_dssp             EEEECCCTTCHHHHHHHHT-------TCSEEEECCCC---
T ss_pred             eEEEEecCCCHHHHHHHhc-------CCCEEEEeCcCCCC
Confidence            7889999999999988887       59999999987643

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.47  E-value=2e-13  Score=93.66  Aligned_cols=76  Identities=21%  Similarity=0.263  Sum_probs=63.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc--CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK--GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +++++|||++++||++++++|+++  |++|++++|+....                               +.+     .
T Consensus         4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~-------------------------------~~~-----~   47 (253)
T 1xq6_A            4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-------------------------------EKI-----G   47 (253)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH-------------------------------HHT-----T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch-------------------------------hhc-----C
Confidence            689999999999999999999999  89999999986533                               111     1


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..+.++.+|++|++++.++++       .+|+||||||...
T Consensus        48 ~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~~   81 (253)
T 1xq6_A           48 GEADVFIGDITDADSINPAFQ-------GIDALVILTSAVP   81 (253)
T ss_dssp             CCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred             CCeeEEEecCCCHHHHHHHHc-------CCCEEEEeccccc
Confidence            246688999999999988876       5999999999764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.47  E-value=4.3e-13  Score=89.46  Aligned_cols=78  Identities=22%  Similarity=0.203  Sum_probs=64.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++++||++++++|+++|++|++++|+.+..                               ...    ...+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-------------------------------~~~----~~~~   47 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-------------------------------PSE----GPRP   47 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS-------------------------------CSS----SCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc-------------------------------ccc----cCCc
Confidence            37899999999999999999999999999999986533                               100    0225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|++++.++++       .+|++|||+|....
T Consensus        48 ~~~~~~D~~~~~~~~~~~~-------~~d~vi~~a~~~~~   80 (206)
T 1hdo_A           48 AHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRND   80 (206)
T ss_dssp             SEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTC
T ss_pred             eEEEEecCCCHHHHHHHHc-------CCCEEEECccCCCC
Confidence            7788999999999888776       58999999997653

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.46  E-value=2.1e-13  Score=98.61  Aligned_cols=81  Identities=20%  Similarity=0.312  Sum_probs=65.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++|||||+|+||.+++++|+++ |+ +|++++|++....                           ...+.+    ..
T Consensus        21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~---------------------------~~~~~~----~~   69 (344)
T 2gn4_A           21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQS---------------------------EMAMEF----ND   69 (344)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHH---------------------------HHHHHH----CC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHH---------------------------HHHHHh----cC
Confidence            689999999999999999999999 97 9999999865431                           111111    12


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++.+|++|++++.++++       ++|+||||||...
T Consensus        70 ~~v~~~~~Dl~d~~~l~~~~~-------~~D~Vih~Aa~~~  103 (344)
T 2gn4_A           70 PRMRFFIGDVRDLERLNYALE-------GVDICIHAAALKH  103 (344)
T ss_dssp             TTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCC
T ss_pred             CCEEEEECCCCCHHHHHHHHh-------cCCEEEECCCCCC
Confidence            367889999999999888775       6999999999764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.46  E-value=4.7e-14  Score=96.70  Aligned_cols=76  Identities=28%  Similarity=0.306  Sum_probs=62.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|+++|||+++|||++++++|+++|+  +|++++|+.+...                               ....    
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~-------------------------------~~~~----   62 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-------------------------------EEAY----   62 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC-------------------------------SGGG----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcc-------------------------------cccc----
Confidence            58999999999999999999999999  9999999865331                               0000    


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ..+.++.+|++|++++.++++       ++|+||||||..
T Consensus        63 ~~~~~~~~D~~d~~~~~~~~~-------~~d~vi~~ag~~   95 (242)
T 2bka_A           63 KNVNQEVVDFEKLDDYASAFQ-------GHDVGFCCLGTT   95 (242)
T ss_dssp             GGCEEEECCGGGGGGGGGGGS-------SCSEEEECCCCC
T ss_pred             CCceEEecCcCCHHHHHHHhc-------CCCEEEECCCcc
Confidence            146778999999988877665       799999999975

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.45  E-value=1.9e-13  Score=92.61  Aligned_cols=74  Identities=23%  Similarity=0.380  Sum_probs=63.0

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||++++++|+++|++|++++|+.+..                               ..+      ..+.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------------------------------~~~------~~~~   44 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV-------------------------------PQY------NNVK   44 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS-------------------------------CCC------TTEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch-------------------------------hhc------CCce
Confidence            689999999999999999999999999999987643                               111      2678


Q ss_pred             EEEecCCC-hHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          84 SLKVDVTK-DAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        84 ~~~~Dv~~-~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++.+|++| ++++.++++       ++|+||||||....
T Consensus        45 ~~~~D~~d~~~~~~~~~~-------~~d~vi~~ag~~~~   76 (219)
T 3dqp_A           45 AVHFDVDWTPEEMAKQLH-------GMDAIINVSGSGGK   76 (219)
T ss_dssp             EEECCTTSCHHHHHTTTT-------TCSEEEECCCCTTS
T ss_pred             EEEecccCCHHHHHHHHc-------CCCEEEECCcCCCC
Confidence            89999999 888877765       69999999998764

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.44  E-value=6.7e-13  Score=96.35  Aligned_cols=89  Identities=19%  Similarity=0.244  Sum_probs=65.4

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcC---
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKEN---   77 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   77 (125)
                      |+++++|||++|+||+++++.|+++|++|++++|+.....                          ....+.+....   
T Consensus        23 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------------------~~~~~~l~~~~~~~   76 (375)
T 1t2a_A           23 MRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFN--------------------------TGRIEHLYKNPQAH   76 (375)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--------------------------CTTTGGGC------
T ss_pred             cCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccc--------------------------hhhHHHHhhhhccc
Confidence            4478999999999999999999999999999999764210                          00001110000   


Q ss_pred             CCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          78 PDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        78 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ....+.++.+|++|++++.++++..     ++|+||||||...
T Consensus        77 ~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~  114 (375)
T 1t2a_A           77 IEGNMKLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSH  114 (375)
T ss_dssp             ---CEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             cCCCceEEEccCCCHHHHHHHHHhc-----CCCEEEECCCccc
Confidence            1225778899999999999998865     6899999999764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.43  E-value=6.6e-13  Score=95.15  Aligned_cols=82  Identities=18%  Similarity=0.210  Sum_probs=65.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |++++|||++|+||++++++|+++|++|++++|+.....                              +.+. ..  .+
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------------------------~~l~-~~--~~   67 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR------------------------------EHLK-DH--PN   67 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG------------------------------GGSC-CC--TT
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch------------------------------hhHh-hc--CC
Confidence            588999999999999999999999999999999754220                              1111 11  25


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|++++.++++.     +++|+||||||....
T Consensus        68 ~~~~~~Dl~d~~~~~~~~~~-----~~~D~vih~A~~~~~  102 (333)
T 2q1w_A           68 LTFVEGSIADHALVNQLIGD-----LQPDAVVHTAASYKD  102 (333)
T ss_dssp             EEEEECCTTCHHHHHHHHHH-----HCCSEEEECCCCCSC
T ss_pred             ceEEEEeCCCHHHHHHHHhc-----cCCcEEEECceecCC
Confidence            77889999999999988875     369999999998654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.43  E-value=1.1e-12  Score=93.60  Aligned_cols=86  Identities=20%  Similarity=0.149  Sum_probs=66.0

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |++++||||++|+||.++++.|+++|++|++++|+.....                          ....+.+.   ...
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------------------~~~~~~~~---~~~   63 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--------------------------RWRLRELG---IEG   63 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--------------------------CHHHHHTT---CGG
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc--------------------------ccchhhcc---ccC
Confidence            3689999999999999999999999999999999765320                          00011111   122


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+.++.+|++|++++.++++..     ++|+||||||...
T Consensus        64 ~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~   98 (335)
T 1rpn_A           64 DIQYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSF   98 (335)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             ceEEEECCCCCHHHHHHHHHHc-----CCCEEEECccccc
Confidence            5778899999999999988864     6899999999754

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.43  E-value=8e-13  Score=95.00  Aligned_cols=85  Identities=16%  Similarity=0.191  Sum_probs=65.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC---
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP---   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   78 (125)
                      ++++|||||+|+||.++++.|+++|++|++++|+.....                           .....+.....   
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   77 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQ---------------------------YNLDEVKTLVSTEQ   77 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCH---------------------------HHHHHHHHTSCHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCch---------------------------hhhhhhhhcccccc
Confidence            689999999999999999999999999999999765321                           11111111110   


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..++.++.+|++|++++.++++       ++|+|||+||...
T Consensus        78 ~~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~  112 (351)
T 3ruf_A           78 WSRFCFIEGDIRDLTTCEQVMK-------GVDHVLHQAALGS  112 (351)
T ss_dssp             HTTEEEEECCTTCHHHHHHHTT-------TCSEEEECCCCCC
T ss_pred             CCceEEEEccCCCHHHHHHHhc-------CCCEEEECCccCC
Confidence            0267889999999999888776       7999999999753

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.42  E-value=8.5e-13  Score=95.15  Aligned_cols=83  Identities=17%  Similarity=0.187  Sum_probs=65.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||.+++++|+++|++|++++|+.....                           .....+.   ...+
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------------------~~~~~~~---~~~~   58 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVP---------------------------SLFETAR---VADG   58 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSS---------------------------CHHHHTT---TTTT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccc---------------------------hhhHhhc---cCCc
Confidence            689999999999999999999999999999999865331                           0011111   1225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|++|++++.++++..     ++|+||||||..
T Consensus        59 ~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~   91 (357)
T 1rkx_A           59 MQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQP   91 (357)
T ss_dssp             SEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCC
T ss_pred             eEEEEccccCHHHHHHHHHhc-----CCCEEEECCCCc
Confidence            778899999999999988865     699999999964

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.42  E-value=1.1e-12  Score=95.38  Aligned_cols=89  Identities=22%  Similarity=0.246  Sum_probs=65.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcC--C
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKEN--P   78 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~   78 (125)
                      |+|++|||||+|+||.++++.|+++|++|++++|+.....                          ...++.+....  .
T Consensus        27 M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~--------------------------~~~~~~~~~~~~~~   80 (381)
T 1n7h_A           27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFN--------------------------TQRINHIYIDPHNV   80 (381)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--------------------------CTTTTTTC------
T ss_pred             hCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcccc--------------------------chhhhhhhhccccc
Confidence            3478999999999999999999999999999999765310                          00001110000  0


Q ss_pred             Cc-eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 DW-KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +. .+.++.+|++|++++.++++..     ++|+||||||...
T Consensus        81 ~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~  118 (381)
T 1n7h_A           81 NKALMKLHYADLTDASSLRRWIDVI-----KPDEVYNLAAQSH  118 (381)
T ss_dssp             --CCEEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             cccceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCcccC
Confidence            11 5778899999999999998865     6899999999764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.40  E-value=1.1e-12  Score=94.77  Aligned_cols=88  Identities=23%  Similarity=0.309  Sum_probs=62.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcC--CC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKEN--PD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   79 (125)
                      ||+++|||++|+||.+++++|+++|++|++++|+.....                          ....+.+....  ..
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------------------~~~~~~~~~~~~~~~   54 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN--------------------------TERVDHIYQDPHTCN   54 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------------------------------
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccc--------------------------hHHHHHHhhccccCC
Confidence            488999999999999999999999999999999764310                          00001111000  12


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++.+|++|++++.++++..     ++|+||||||...
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~   90 (372)
T 1db3_A           55 PKFHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSH   90 (372)
T ss_dssp             CCEEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCT
T ss_pred             CceEEEECCCCCHHHHHHHHHhc-----CCCEEEECCcccC
Confidence            25778899999999999998865     6899999999865

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.40  E-value=2.1e-13  Score=94.91  Aligned_cols=75  Identities=24%  Similarity=0.231  Sum_probs=63.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||++++||++++++|+++|++|++++|+....                                 +   .  .
T Consensus         1 M~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------------------------~---~--~   42 (267)
T 3ay3_A            1 MLNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA---------------------------------A---E--A   42 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC---------------------------------C---C--T
T ss_pred             CCceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc---------------------------------c---C--C
Confidence            678999999999999999999999999999999976421                                 0   0  1


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+.++.+|++|++++.++++       ++|+||||||...
T Consensus        43 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~~a~~~~   75 (267)
T 3ay3_A           43 HEEIVACDLADAQAVHDLVK-------DCDGIIHLGGVSV   75 (267)
T ss_dssp             TEEECCCCTTCHHHHHHHHT-------TCSEEEECCSCCS
T ss_pred             CccEEEccCCCHHHHHHHHc-------CCCEEEECCcCCC
Confidence            45778899999999888876       5999999999863

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.40  E-value=2e-12  Score=92.47  Aligned_cols=84  Identities=13%  Similarity=0.130  Sum_probs=64.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++||||++|+||+++++.|+++|++|++++|+.....                          ......+..   ..++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------------------~~~~~~l~~---~~~~   52 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--------------------------TDNLHWLSS---LGNF   52 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--------------------------HHHHHHHHT---TCCC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCc--------------------------hhhhhhhcc---CCce
Confidence            78999999999999999999999999999998542110                          011122221   1257


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|++++.++++..     ++|+||||||...
T Consensus        53 ~~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~   85 (347)
T 1orr_A           53 EFVHGDIRNKNDVTRLITKY-----MPDSCFHLAGQVA   85 (347)
T ss_dssp             EEEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             EEEEcCCCCHHHHHHHHhcc-----CCCEEEECCcccC
Confidence            78899999999999988862     6999999999754

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.40  E-value=4.7e-13  Score=95.77  Aligned_cols=85  Identities=15%  Similarity=0.133  Sum_probs=63.4

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|++|||||+|+||.+++++|+++|++|+++.|+.+.....                         .....+. .  ..
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~-------------------------~~~~~~~-~--~~   59 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKV-------------------------SHLLELQ-E--LG   59 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTT-------------------------HHHHHHG-G--GS
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhH-------------------------HHHHhcC-C--CC
Confidence            478999999999999999999999999999988875432100                         0001111 1  12


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|++|++++.++++       ++|+|||+|+...
T Consensus        60 ~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~A~~~~   92 (338)
T 2rh8_A           60 DLKIFRADLTDELSFEAPIA-------GCDFVFHVATPVH   92 (338)
T ss_dssp             CEEEEECCTTTSSSSHHHHT-------TCSEEEEESSCCC
T ss_pred             cEEEEecCCCChHHHHHHHc-------CCCEEEEeCCccC
Confidence            57788999999998887776       5899999998753

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.40  E-value=4.8e-13  Score=95.49  Aligned_cols=84  Identities=20%  Similarity=0.230  Sum_probs=63.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++||||++|+||.++++.|+++|++|++++|+......                           ..+.+..... .+
T Consensus        11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------------------~~~~~~~~~~-~~   62 (342)
T 1y1p_A           11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLAN---------------------------LQKRWDAKYP-GR   62 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH---------------------------HHHHHHHHST-TT
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHH---------------------------HHHHhhccCC-Cc
Confidence            6899999999999999999999999999999998654311                           0011111111 25


Q ss_pred             eeEE-EecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSL-KVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~-~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++ .+|++|++++.++++       ++|+||||||...
T Consensus        63 ~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~   95 (342)
T 1y1p_A           63 FETAVVEDMLKQGAYDEVIK-------GAAGVAHIASVVS   95 (342)
T ss_dssp             EEEEECSCTTSTTTTTTTTT-------TCSEEEECCCCCS
T ss_pred             eEEEEecCCcChHHHHHHHc-------CCCEEEEeCCCCC
Confidence            6777 799999988777665       6999999999865

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.39  E-value=2.2e-12  Score=93.42  Aligned_cols=78  Identities=17%  Similarity=0.286  Sum_probs=65.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++|||++|+||.++++.|+++ |++|++++|+....                               ..+..   ..
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-------------------------------~~~~~---~~   69 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL-------------------------------GDLVK---HE   69 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT-------------------------------GGGGG---ST
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh-------------------------------hhhcc---CC
Confidence            689999999999999999999998 99999999987543                               11111   12


Q ss_pred             eeeEEEecCC-ChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVT-KDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|++ |.+.+.++++       ++|+|||+||...
T Consensus        70 ~v~~~~~Dl~~d~~~~~~~~~-------~~d~Vih~A~~~~  103 (372)
T 3slg_A           70 RMHFFEGDITINKEWVEYHVK-------KCDVILPLVAIAT  103 (372)
T ss_dssp             TEEEEECCTTTCHHHHHHHHH-------HCSEEEECBCCCC
T ss_pred             CeEEEeCccCCCHHHHHHHhc-------cCCEEEEcCcccc
Confidence            6788999999 9999988887       5999999999865

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.39  E-value=7.2e-13  Score=89.70  Aligned_cols=72  Identities=22%  Similarity=0.302  Sum_probs=58.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||++++++|+++|++|++++|+.+..                               ..+.    ...+.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------------------------------~~~~----~~~~~   46 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA-------------------------------ADRL----GATVA   46 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHT----CTTSE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc-------------------------------cccc----CCCce
Confidence            489999999999999999999999999999987644                               2221    12577


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++.+|++|+++  +       .+.++|+||||||..
T Consensus        47 ~~~~D~~d~~~--~-------~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A           47 TLVKEPLVLTE--A-------DLDSVDAVVDALSVP   73 (224)
T ss_dssp             EEECCGGGCCH--H-------HHTTCSEEEECCCCC
T ss_pred             EEecccccccH--h-------hcccCCEEEECCccC
Confidence            88999999987  2       235799999999986

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.39  E-value=5.4e-13  Score=94.62  Aligned_cols=72  Identities=21%  Similarity=0.318  Sum_probs=46.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+|+++|||++|+||.+++++|+++|++|++++|+..                                 .      .  
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------------------------------~------~--   39 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA---------------------------------R------P--   39 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------------------
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC---------------------------------C------C--
Confidence            7899999999999999999999999999999998642                                 0      0  


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .  ++.+|++|++++.++++..     ++|+||||||...
T Consensus        40 ~--~~~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~   72 (315)
T 2ydy_A           40 K--FEQVNLLDSNAVHHIIHDF-----QPHVIVHCAAERR   72 (315)
T ss_dssp             --------------CHHHHHHH-----CCSEEEECC----
T ss_pred             C--eEEecCCCHHHHHHHHHhh-----CCCEEEECCcccC
Confidence            1  5678999999998888864     6999999999864

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.39  E-value=1.6e-12  Score=92.37  Aligned_cols=75  Identities=19%  Similarity=0.206  Sum_probs=63.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .+++|||||+|+||++++++|+++|++|++++|+....                               .     .   .
T Consensus        12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-------------------------------~-----l---~   52 (321)
T 2pk3_A           12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK-------------------------------L-----P---N   52 (321)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCC-------------------------------C-----T---T
T ss_pred             cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc-------------------------------c-----c---e
Confidence            47899999999999999999999999999999975411                               0     1   4


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++.     +++|+||||||...
T Consensus        53 ~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~   86 (321)
T 2pk3_A           53 VEMISLDIMDSQRVKKVISD-----IKPDYIFHLAAKSS   86 (321)
T ss_dssp             EEEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCC
T ss_pred             eeEEECCCCCHHHHHHHHHh-----cCCCEEEEcCcccc
Confidence            67789999999999998875     47999999999865

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.38  E-value=2.3e-12  Score=92.81  Aligned_cols=85  Identities=18%  Similarity=0.239  Sum_probs=64.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC---
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP---   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   78 (125)
                      +++++|||++|+||+++++.|+++|++|++++|+.....                           .....+.....   
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------------------~~~~~~~~~~~~~~   79 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQ---------------------------RNLDEVRSLVSEKQ   79 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCH---------------------------HHHHHHHHHSCHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccch---------------------------hhHHHHhhhccccc
Confidence            578999999999999999999999999999999754210                           00011110000   


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ...+.++.+|++|++++.++++       ++|+||||||...
T Consensus        80 ~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~  114 (352)
T 1sb8_A           80 WSNFKFIQGDIRNLDDCNNACA-------GVDYVLHQAALGS  114 (352)
T ss_dssp             HTTEEEEECCTTSHHHHHHHHT-------TCSEEEECCSCCC
T ss_pred             CCceEEEECCCCCHHHHHHHhc-------CCCEEEECCcccC
Confidence            1257788999999999888776       7999999999764

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.38  E-value=1.9e-12  Score=93.60  Aligned_cols=91  Identities=13%  Similarity=0.216  Sum_probs=63.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH--cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA--KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~--~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ++++|||||+|+||+++++.|++  +|++|++++|+..........                     .+........ ..
T Consensus        10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~---------------------~~~~~~~~~~-~~   67 (362)
T 3sxp_A           10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNR---------------------PSSLGHFKNL-IG   67 (362)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC----------------------------CCCCCCGGGG-TT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccc---------------------hhhhhhhhhc-cc
Confidence            68999999999999999999999  899999999976421000000                     0000001111 12


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..+.++.+|++|++++.++      ...++|+||||||+..
T Consensus        68 ~~~~~~~~Dl~d~~~~~~~------~~~~~D~vih~A~~~~  102 (362)
T 3sxp_A           68 FKGEVIAADINNPLDLRRL------EKLHFDYLFHQAAVSD  102 (362)
T ss_dssp             CCSEEEECCTTCHHHHHHH------TTSCCSEEEECCCCCG
T ss_pred             cCceEEECCCCCHHHHHHh------hccCCCEEEECCccCC
Confidence            2568899999999998876      2358999999999765

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.38  E-value=3.8e-12  Score=90.87  Aligned_cols=83  Identities=22%  Similarity=0.215  Sum_probs=62.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ++++||||++|+||++++++|+++|  ++|++++|+.....                          .+....+.   ..
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~--------------------------~~~~~~~~---~~   53 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSN--------------------------PANLKDLE---DD   53 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--------------------------GGGGTTTT---TC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCc--------------------------hhHHhhhc---cC
Confidence            4679999999999999999999996  89999998642110                          00011111   12


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++.+|++|++++.+++.       ++|+||||||...
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~   87 (336)
T 2hun_A           54 PRYTFVKGDVADYELVKELVR-------KVDGVVHLAAESH   87 (336)
T ss_dssp             TTEEEEECCTTCHHHHHHHHH-------TCSEEEECCCCCC
T ss_pred             CceEEEEcCCCCHHHHHHHhh-------CCCEEEECCCCcC
Confidence            367889999999999888873       7999999999864

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.38  E-value=2.2e-12  Score=92.43  Aligned_cols=78  Identities=17%  Similarity=0.167  Sum_probs=64.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-------CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-------HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMA   74 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (125)
                      +++++|||++|+||.+++++|+++|       ++|++++|+....                               ..  
T Consensus        14 ~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~-------------------------------~~--   60 (342)
T 2hrz_A           14 GMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEA-------------------------------PA--   60 (342)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCC-------------------------------CT--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcc-------------------------------cc--
Confidence            6789999999999999999999999       8999999975422                               00  


Q ss_pred             hcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          75 KENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        75 ~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                        ....++.++.+|++|++++.++++      +++|+||||||...
T Consensus        61 --~~~~~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~A~~~~   98 (342)
T 2hrz_A           61 --GFSGAVDARAADLSAPGEAEKLVE------ARPDVIFHLAAIVS   98 (342)
T ss_dssp             --TCCSEEEEEECCTTSTTHHHHHHH------TCCSEEEECCCCCH
T ss_pred             --ccCCceeEEEcCCCCHHHHHHHHh------cCCCEEEECCccCc
Confidence              012367889999999999888876      47999999999753

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.38  E-value=1.2e-12  Score=88.18  Aligned_cols=72  Identities=22%  Similarity=0.344  Sum_probs=59.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||+++++.|+++|++|++++|+.+..                               ..+.     ..+.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------------------------------~~~~-----~~~~   45 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI-------------------------------TQTH-----KDIN   45 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH-------------------------------HHHC-----SSSE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh-------------------------------hhcc-----CCCe
Confidence            589999999999999999999999999999987644                               2221     2567


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.+|++|+++  +       .+.++|+||||||...
T Consensus        46 ~~~~D~~d~~~--~-------~~~~~d~vi~~ag~~~   73 (221)
T 3ew7_A           46 ILQKDIFDLTL--S-------DLSDQNVVVDAYGISP   73 (221)
T ss_dssp             EEECCGGGCCH--H-------HHTTCSEEEECCCSST
T ss_pred             EEeccccChhh--h-------hhcCCCEEEECCcCCc
Confidence            88999999987  2       2357999999999854

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.38  E-value=1.4e-12  Score=93.68  Aligned_cols=72  Identities=21%  Similarity=0.325  Sum_probs=61.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++|||||+|+||.++++.|+++|++|++++|+...                                         ..
T Consensus        19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------------------------------~~   57 (347)
T 4id9_A           19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------------------------------TG   57 (347)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------------------------------SC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------------------------------CC
Confidence            5789999999999999999999999999999997541                                         25


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|.+++.++++       ++|+|||+|+....
T Consensus        58 ~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~~   90 (347)
T 4id9_A           58 GEEVVGSLEDGQALSDAIM-------GVSAVLHLGAFMSW   90 (347)
T ss_dssp             CSEEESCTTCHHHHHHHHT-------TCSEEEECCCCCCS
T ss_pred             ccEEecCcCCHHHHHHHHh-------CCCEEEECCcccCc
Confidence            6788999999999888876       79999999998764

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.37  E-value=2e-12  Score=91.45  Aligned_cols=81  Identities=21%  Similarity=0.297  Sum_probs=62.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++|||+++|+|+++++.|++.|++|++++|+.+...                           +..+.+...   ..
T Consensus       119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~---------------------------~l~~~~~~~---~~  168 (287)
T 1lu9_A          119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQ---------------------------AAADSVNKR---FK  168 (287)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHHHHH---HT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHH---------------------------HHHHHHHhc---CC
Confidence            689999999999999999999999999999999865442                           111222111   12


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|+++++++.++++       .+|+||||+|+.
T Consensus       169 ~~~~~~D~~~~~~~~~~~~-------~~DvlVn~ag~g  199 (287)
T 1lu9_A          169 VNVTAAETADDASRAEAVK-------GAHFVFTAGAIG  199 (287)
T ss_dssp             CCCEEEECCSHHHHHHHTT-------TCSEEEECCCTT
T ss_pred             cEEEEecCCCHHHHHHHHH-------hCCEEEECCCcc
Confidence            4567899999998877766       489999999864

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.37  E-value=3.2e-12  Score=91.73  Aligned_cols=86  Identities=14%  Similarity=0.118  Sum_probs=64.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +++++||||+|+||.+++++|+++|  +.|++.+|......                          .   ..+......
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--------------------------~---~~l~~~~~~   74 (346)
T 4egb_A           24 AMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--------------------------L---NNVKSIQDH   74 (346)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--------------------------G---GGGTTTTTC
T ss_pred             CCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--------------------------h---hhhhhhccC
Confidence            6789999999999999999999999  67777777642110                          0   111111222


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .++.++.+|++|++.+.++++..     ++|+|||+||....
T Consensus        75 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~  111 (346)
T 4egb_A           75 PNYYFVKGEIQNGELLEHVIKER-----DVQVIVNFAAESHV  111 (346)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHH-----TCCEEEECCCCC--
T ss_pred             CCeEEEEcCCCCHHHHHHHHhhc-----CCCEEEECCcccch
Confidence            36889999999999999999863     69999999998653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.37  E-value=7.5e-12  Score=91.26  Aligned_cols=96  Identities=18%  Similarity=0.233  Sum_probs=65.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHH-HcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHH-HhhcCC-
Q psy7029           2 SKIIVVTGASVGIGAAILRALA-AKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDA-MAKENP-   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~-~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-   78 (125)
                      ++++||||++|+||.++++.|+ ++|++|++++|+.......                   ........+.. +..... 
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~   62 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKS-------------------DHVETRENVARKLQQSDGP   62 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCC-------------------TTSCCHHHHHHHHHHSCSS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccc-------------------cccchHHHHHHHHHHhhcc
Confidence            4589999999999999999999 9999999999875421000                   00000000010 111100 


Q ss_pred             --Cce---eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 --DWK---VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 --~~~---~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                        ...   +.++.+|++|++++.+++++    ++++|+||||||...
T Consensus        63 ~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d~vih~A~~~~  105 (397)
T 1gy8_A           63 KPPWADRYAALEVGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLA  105 (397)
T ss_dssp             CCTTTTCCCEEEESCTTCHHHHHHHHHH----SCCCCEEEECCCCCC
T ss_pred             ccccCCceEEEEECCCCCHHHHHHHHHh----cCCCCEEEECCCccC
Confidence              113   77889999999998887764    456999999999864

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.37  E-value=3.2e-12  Score=90.90  Aligned_cols=81  Identities=20%  Similarity=0.320  Sum_probs=63.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+++++|||++|++|.++++.|+++|++|+++.|+....                           ......+...    
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~---------------------------~~~~~~l~~~----   58 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK---------------------------TTLLDEFQSL----   58 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSC---------------------------HHHHHHHHHT----
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCch---------------------------hhHHHHhhcC----
Confidence            356899999999999999999999999999999986411                           0111222111    


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .+.++.+|++|++++.++++       .+|+|||+++..
T Consensus        59 ~v~~v~~Dl~d~~~l~~a~~-------~~d~vi~~a~~~   90 (318)
T 2r6j_A           59 GAIIVKGELDEHEKLVELMK-------KVDVVISALAFP   90 (318)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECCCGG
T ss_pred             CCEEEEecCCCHHHHHHHHc-------CCCEEEECCchh
Confidence            46678999999999888886       599999999864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.36  E-value=2.6e-12  Score=91.83  Aligned_cols=76  Identities=24%  Similarity=0.268  Sum_probs=58.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||++|+||.++++.|+++|++|++++|+....                               +.+..    .++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------------------------~~l~~----~~~   58 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI-------------------------------QRLAY----LEP   58 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG-------------------------------GGGGG----GCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh-------------------------------hhhcc----CCe
Confidence            4799999999999999999999999999999986533                               11111    146


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|++++.++++       ++|+|||+||...
T Consensus        59 ~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~~~~   89 (342)
T 2x4g_A           59 ECRVAEMLDHAGLERALR-------GLDGVIFSAGYYP   89 (342)
T ss_dssp             EEEECCTTCHHHHHHHTT-------TCSEEEEC-----
T ss_pred             EEEEecCCCHHHHHHHHc-------CCCEEEECCccCc
Confidence            788999999999888776       6999999999754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.36  E-value=1.8e-12  Score=91.62  Aligned_cols=78  Identities=18%  Similarity=0.119  Sum_probs=64.1

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHc--CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAK--GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      |+++++|||++|+||.+++++|+++  |++|++++|+....                               . +..   
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------------------------~-~~~---   45 (312)
T 2yy7_A            1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-------------------------------D-VVN---   45 (312)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-------------------------------H-HHH---
T ss_pred             CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-------------------------------c-ccC---
Confidence            7889999999999999999999999  89999999976422                               0 000   


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                        .+.++.+|++|++++.++++..     ++|+|||+||...
T Consensus        46 --~~~~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~   80 (312)
T 2yy7_A           46 --SGPFEVVNALDFNQIEHLVEVH-----KITDIYLMAALLS   80 (312)
T ss_dssp             --SSCEEECCTTCHHHHHHHHHHT-----TCCEEEECCCCCH
T ss_pred             --CCceEEecCCCHHHHHHHHhhc-----CCCEEEECCccCC
Confidence              3457899999999999888753     6999999999753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.36  E-value=2.8e-12  Score=90.96  Aligned_cols=75  Identities=19%  Similarity=0.248  Sum_probs=61.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+++++|||++|+||.++++.|+++|++|++++|+....                               . +.      
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------------------------~-~~------   42 (311)
T 3m2p_A            1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK-------------------------------A-IN------   42 (311)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------------------------------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc-------------------------------c-CC------
Confidence            789999999999999999999999999999999983321                               1 11      


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .+.++.+|++ ++++.++++       ++|+|||+||....
T Consensus        43 ~~~~~~~Dl~-~~~~~~~~~-------~~d~Vih~a~~~~~   75 (311)
T 3m2p_A           43 DYEYRVSDYT-LEDLINQLN-------DVDAVVHLAATRGS   75 (311)
T ss_dssp             CCEEEECCCC-HHHHHHHTT-------TCSEEEECCCCCCS
T ss_pred             ceEEEEcccc-HHHHHHhhc-------CCCEEEEccccCCC
Confidence            4678899999 988887776       79999999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.36  E-value=4.7e-12  Score=91.22  Aligned_cols=83  Identities=18%  Similarity=0.269  Sum_probs=63.4

Q ss_pred             EEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++||||++|+||.++++.|+++ |++|++++|+.....                          ...+..+.   ...++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--------------------------~~~~~~~~---~~~~~   52 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--------------------------LESLSDIS---ESNRY   52 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--------------------------GGGGTTTT---TCTTE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCc--------------------------hhhhhhhh---cCCCe
Confidence            4899999999999999999998 799999998652110                          00011111   12367


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|++++.+++++     +++|+||||||...
T Consensus        53 ~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~   85 (361)
T 1kew_A           53 NFEHADICDSAEITRIFEQ-----YQPDAVMHLAAESH   85 (361)
T ss_dssp             EEEECCTTCHHHHHHHHHH-----HCCSEEEECCSCCC
T ss_pred             EEEECCCCCHHHHHHHHhh-----cCCCEEEECCCCcC
Confidence            8899999999999998876     37999999999864

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.36  E-value=3.7e-12  Score=87.47  Aligned_cols=80  Identities=25%  Similarity=0.288  Sum_probs=61.2

Q ss_pred             CcEEEEecC----------------CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccc
Q psy7029           2 SKIIVVTGA----------------SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR   65 (125)
Q Consensus         2 ~~~~lItG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (125)
                      ||++|||||                ++|+|+++|+.|+++|++|++++++.. .                          
T Consensus         8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l--------------------------   60 (226)
T 1u7z_A            8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-L--------------------------   60 (226)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-C--------------------------
T ss_pred             CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-c--------------------------
Confidence            799999999                588999999999999999999987642 1                          


Q ss_pred             hHhHHHHHhhcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          66 RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                           +    ...  .+  -.+|+.+.++   +++.+.+.++++|++|||||+..+.|+
T Consensus        61 -----~----~~~--g~--~~~dv~~~~~---~~~~v~~~~~~~Dili~~Aav~d~~p~  103 (226)
T 1u7z_A           61 -----P----TPP--FV--KRVDVMTALE---MEAAVNASVQQQNIFIGCAAVADYRAA  103 (226)
T ss_dssp             -----C----CCT--TE--EEEECCSHHH---HHHHHHHHGGGCSEEEECCBCCSEEES
T ss_pred             -----c----cCC--CC--eEEccCcHHH---HHHHHHHhcCCCCEEEECCcccCCCCc
Confidence                 0    001  11  2457777544   666777788999999999999876554

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.36  E-value=4.9e-12  Score=90.47  Aligned_cols=84  Identities=23%  Similarity=0.268  Sum_probs=62.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||++++++|+++|++|++++|......                           ...+.+.... +.++.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~---------------------------~~~~~~~~~~-~~~~~   53 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR---------------------------SVLPVIERLG-GKHPT   53 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT---------------------------THHHHHHHHH-TSCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcch---------------------------hHHHHHHhhc-CCcce
Confidence            6899999999999999999999999999987533210                           0001111110 12567


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.+|++|++++.++++.     .++|+||||||...
T Consensus        54 ~~~~Dl~~~~~~~~~~~~-----~~~D~vih~A~~~~   85 (338)
T 1udb_A           54 FVEGDIRNEALMTEILHD-----HAIDTVIHFAGLKA   85 (338)
T ss_dssp             EEECCTTCHHHHHHHHHH-----TTCSEEEECCSCCC
T ss_pred             EEEccCCCHHHHHHHhhc-----cCCCEEEECCccCc
Confidence            789999999999888875     26999999999754

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.35  E-value=3.1e-12  Score=93.27  Aligned_cols=77  Identities=22%  Similarity=0.145  Sum_probs=63.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||.+++++|+++|++|++++|+.....                               ...    ...
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------------------------~~~----~~~   73 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-------------------------------TED----MFC   73 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-------------------------------CGG----GTC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccch-------------------------------hhc----cCC
Confidence            578999999999999999999999999999999865320                               000    114


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++       ++|+||||||...
T Consensus        74 v~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~  105 (379)
T 2c5a_A           74 DEFHLVDLRVMENCLKVTE-------GVDHVFNLAADMG  105 (379)
T ss_dssp             SEEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred             ceEEECCCCCHHHHHHHhC-------CCCEEEECceecC
Confidence            6778999999999888875       6999999999764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.35  E-value=2.4e-12  Score=92.12  Aligned_cols=84  Identities=20%  Similarity=0.204  Sum_probs=62.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC-Cc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP-DW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   80 (125)
                      ++++|||||+|+||.+++++|+++|++|+++.|+......                            ...+..... ..
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~----------------------------~~~~~~~~~~~~   56 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKK----------------------------VKHLLDLPKAET   56 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHH----------------------------HHHHHTSTTHHH
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHH----------------------------HHHHHhcccCCC
Confidence            5899999999999999999999999999999987653210                            011110000 12


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|++|++++.++++       .+|+|||+|+...
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~   89 (337)
T 2c29_D           57 HLTLWKADLADEGSFDEAIK-------GCTGVFHVATPMD   89 (337)
T ss_dssp             HEEEEECCTTSTTTTHHHHT-------TCSEEEECCCCCC
T ss_pred             eEEEEEcCCCCHHHHHHHHc-------CCCEEEEeccccC
Confidence            57788999999998888775       5899999998753

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.35  E-value=2.6e-12  Score=90.72  Aligned_cols=85  Identities=24%  Similarity=0.359  Sum_probs=62.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch-hhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE-MIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++||||+|+||+++++.|+++|++|+++.|+.. .....                      ...+.++.+..    .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----------------------~~~~~~~~l~~----~   55 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPE----------------------TKEELIDNYQS----L   55 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHH----------------------HHHHHHHHHHH----T
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChH----------------------HHHHHHHHHHh----C
Confidence            578999999999999999999999999999999861 00000                      00011122211    1


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .+.++.+|++|++++.++++       ++|+||||+|..
T Consensus        56 ~v~~v~~D~~d~~~l~~~~~-------~~d~vi~~a~~~   87 (307)
T 2gas_A           56 GVILLEGDINDHETLVKAIK-------QVDIVICAAGRL   87 (307)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECSSSS
T ss_pred             CCEEEEeCCCCHHHHHHHHh-------CCCEEEECCccc
Confidence            46778999999999888876       599999999864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.34  E-value=7.9e-12  Score=91.25  Aligned_cols=101  Identities=14%  Similarity=0.042  Sum_probs=65.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCcccc-ccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG-FARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (125)
                      |+.+|||||+|+||.+++++|+++|++|++++|........         .   .+..... .....+......... ..
T Consensus        11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~---------~---~~~~~~~~~~~l~~~~~~~~~~~-~~   77 (404)
T 1i24_A           11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDH---------Q---LGLESLTPIASIHDRISRWKALT-GK   77 (404)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHH---------H---HTCCCSSCCCCHHHHHHHHHHHH-CC
T ss_pred             CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCcccccc---------c---cccccccccchhhhhhhhHhhcc-CC
Confidence            57899999999999999999999999999999864321000         0   0000000 000000011111111 12


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|++|++++.++++..     ++|+||||||...
T Consensus        78 ~v~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~  112 (404)
T 1i24_A           78 SIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRS  112 (404)
T ss_dssp             CCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             ceEEEECCCCCHHHHHHHHhcc-----CCCEEEECCCCCC
Confidence            5778899999999999988864     6999999999764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.34  E-value=5.6e-12  Score=90.40  Aligned_cols=82  Identities=17%  Similarity=0.150  Sum_probs=63.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc--CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK--GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +++++|||++|+||.+++++|+++  |++|++++|+.....                          ......+    ..
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------------------------~~~~~~~----~~   53 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--------------------------KANLEAI----LG   53 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--------------------------GGGTGGG----CS
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCC--------------------------hhHHhhh----cc
Confidence            378999999999999999999999  899999999753110                          0000111    11


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.++.+|++|++++.++++       .+|+||||||...
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~   87 (348)
T 1oc2_A           54 DRVELVVGDIADAELVDKLAA-------KADAIVHYAAESH   87 (348)
T ss_dssp             SSEEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCC
T ss_pred             CCeEEEECCCCCHHHHHHHhh-------cCCEEEECCcccC
Confidence            367889999999999888876       4699999999764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.34  E-value=5.8e-12  Score=89.73  Aligned_cols=78  Identities=18%  Similarity=0.223  Sum_probs=63.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||++|+||.++++.|+++|++|++++|+.....                              +.    ... .+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------------------------~~----~~~-~~   46 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE------------------------------DA----ITE-GA   46 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG------------------------------GG----SCT-TS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch------------------------------hh----cCC-Cc
Confidence            78999999999999999999999999999998754220                              11    111 46


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|++++.++++.     .++|+|||+||...
T Consensus        47 ~~~~~D~~~~~~~~~~~~~-----~~~d~vih~a~~~~   79 (330)
T 2c20_A           47 KFYNGDLRDKAFLRDVFTQ-----ENIEAVMHFAADSL   79 (330)
T ss_dssp             EEEECCTTCHHHHHHHHHH-----SCEEEEEECCCCCC
T ss_pred             EEEECCCCCHHHHHHHHhh-----cCCCEEEECCcccC
Confidence            7789999999999888875     47999999999764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.33  E-value=1.3e-11  Score=92.77  Aligned_cols=99  Identities=14%  Similarity=0.195  Sum_probs=66.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc---CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK---GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      +|+++|||++|+||.+++++|+++   |++|++++|+.........+....       ..      ............. 
T Consensus        73 ~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~-------~~------~~~~~~~~~~~~~-  138 (478)
T 4dqv_A           73 LRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTF-------DS------GDPELLRHFKELA-  138 (478)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGG-------CS------SCHHHHHHHHHHH-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHH-------Hh------cchhhhhhhhhhc-
Confidence            689999999999999999999999   899999999876432111111000       00      0000001111111 


Q ss_pred             CceeeEEEecCC------ChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          79 DWKVHSLKVDVT------KDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        79 ~~~~~~~~~Dv~------~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ..++.++.+|++      +.+.+.++++       ++|+||||||...+
T Consensus       139 ~~~v~~v~~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~  180 (478)
T 4dqv_A          139 ADRLEVVAGDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA  180 (478)
T ss_dssp             TTTEEEEECCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB
T ss_pred             cCceEEEEeECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC
Confidence            136889999998      6667777766       59999999998765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.33  E-value=8.5e-12  Score=88.70  Aligned_cols=85  Identities=15%  Similarity=0.231  Sum_probs=62.9

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc-hhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA-EMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+++++|||++|++|.++++.|+++|++|+++.|+. .....                       ...+.++.+..    
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------------------~~~~~l~~~~~----   55 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTP-----------------------SSVQLREEFRS----   55 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCH-----------------------HHHHHHHHHHH----
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccCh-----------------------HHHHHHHHhhc----
Confidence            457899999999999999999999999999999986 21000                       00011112211    


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ..+.++.+|++|++++.++++       .+|+||||++..
T Consensus        56 ~~v~~v~~D~~d~~~l~~a~~-------~~d~vi~~a~~~   88 (321)
T 3c1o_A           56 MGVTIIEGEMEEHEKMVSVLK-------QVDIVISALPFP   88 (321)
T ss_dssp             TTCEEEECCTTCHHHHHHHHT-------TCSEEEECCCGG
T ss_pred             CCcEEEEecCCCHHHHHHHHc-------CCCEEEECCCcc
Confidence            146788999999999888887       599999999864

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.32  E-value=1.4e-12  Score=92.54  Aligned_cols=84  Identities=18%  Similarity=0.209  Sum_probs=60.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec-CchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR-RAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ||++|||||+|+||++++++|+++|++|+++.| +......                         ......+.  ....
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-------------------------~~~~~~~~--~~~~   53 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-------------------------VSFLTNLP--GASE   53 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-------------------------CHHHHTST--THHH
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-------------------------HHHHHhhh--ccCC
Confidence            589999999999999999999999999999988 5421100                         00001000  0011


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ++.++.+|++|++++.++++       .+|+|||||+..
T Consensus        54 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~   85 (322)
T 2p4h_X           54 KLHFFNADLSNPDSFAAAIE-------GCVGIFHTASPI   85 (322)
T ss_dssp             HEEECCCCTTCGGGGHHHHT-------TCSEEEECCCCC
T ss_pred             ceEEEecCCCCHHHHHHHHc-------CCCEEEEcCCcc
Confidence            46778899999999888876       589999999754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.31  E-value=6.9e-12  Score=87.97  Aligned_cols=75  Identities=23%  Similarity=0.199  Sum_probs=62.0

Q ss_pred             EEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|||++|+||+++++.|++. |++|+++.|+.+..                               ..+.    ...+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-------------------------------~~~~----~~~v   46 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-------------------------------PDDW----RGKV   46 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-------------------------------CGGG----BTTB
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-------------------------------HHhh----hCCC
Confidence            5899999999999999999998 99999999987643                               1111    1257


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|++++.++++       ++|+||||+|...
T Consensus        47 ~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~   77 (289)
T 3e48_A           47 SVRQLDYFNQESMVEAFK-------GMDTVVFIPSIIH   77 (289)
T ss_dssp             EEEECCTTCHHHHHHHTT-------TCSEEEECCCCCC
T ss_pred             EEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCCc
Confidence            788999999999888776       6899999999764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.30  E-value=8.4e-12  Score=97.43  Aligned_cols=86  Identities=21%  Similarity=0.286  Sum_probs=65.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|||||+|+||++++++|+++|++|++++|+.......                        ...+..+.    ...
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~------------------------~~~l~~~~----~~~   62 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDS------------------------VARLEVLT----KHH   62 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHH------------------------HHHHHHHH----TSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHH------------------------HHHHhhcc----CCc
Confidence            68999999999999999999999999999999875432100                        00011111    125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++++.++++..     ++|+||||||...
T Consensus        63 v~~v~~Dl~d~~~l~~~~~~~-----~~D~Vih~A~~~~   96 (699)
T 1z45_A           63 IPFYEVDLCDRKGLEKVFKEY-----KIDSVIHFAGLKA   96 (699)
T ss_dssp             CCEEECCTTCHHHHHHHHHHS-----CCCEEEECCSCCC
T ss_pred             eEEEEcCCCCHHHHHHHHHhC-----CCCEEEECCcccC
Confidence            678899999999998888752     7999999999764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.29  E-value=1.7e-11  Score=86.48  Aligned_cols=78  Identities=15%  Similarity=0.160  Sum_probs=62.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|+++|||++|+||+++++.|+++| ++|+++.|++....                             .+.+...    
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~-----------------------------~~~l~~~----   51 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA-----------------------------AKELRLQ----   51 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH-----------------------------HHHHHHT----
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH-----------------------------HHHHHHC----
Confidence            4799999999999999999999998 99999999865321                             0111111    


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .+.++.+|++|++++.++++       ++|+||||++..
T Consensus        52 ~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~   83 (299)
T 2wm3_A           52 GAEVVQGDQDDQVIMELALN-------GAYATFIVTNYW   83 (299)
T ss_dssp             TCEEEECCTTCHHHHHHHHT-------TCSEEEECCCHH
T ss_pred             CCEEEEecCCCHHHHHHHHh-------cCCEEEEeCCCC
Confidence            35678999999999888876       599999999853

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.28  E-value=1.9e-12  Score=89.19  Aligned_cols=81  Identities=16%  Similarity=0.286  Sum_probs=61.1

Q ss_pred             CcEEEEecC----------------CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccc
Q psy7029           2 SKIIVVTGA----------------SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR   65 (125)
Q Consensus         2 ~~~~lItG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (125)
                      ||++|||||                +|++|+++|++|+++|++|+++.|.....                          
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~--------------------------   56 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK--------------------------   56 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC--------------------------
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------------------
Confidence            899999999                67799999999999999999999975311                          


Q ss_pred             hHhHHHHHhhcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          66 RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                               ...+. .+.  ..|+   +++.++++.+.+.++++|++|+|||+..+.|
T Consensus        57 ---------~~~~~-~~~--~~~v---~s~~em~~~v~~~~~~~Dili~aAAvsD~~p   99 (232)
T 2gk4_A           57 ---------PEPHP-NLS--IREI---TNTKDLLIEMQERVQDYQVLIHSMAVSDYTP   99 (232)
T ss_dssp             ---------CCCCT-TEE--EEEC---CSHHHHHHHHHHHGGGCSEEEECSBCCSEEE
T ss_pred             ---------ccCCC-CeE--EEEH---hHHHHHHHHHHHhcCCCCEEEEcCccccccc
Confidence                     00001 222  2233   4566677777788899999999999987655

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.28  E-value=1.3e-11  Score=87.34  Aligned_cols=84  Identities=17%  Similarity=0.232  Sum_probs=63.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh-hHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI-DFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++|||++|++|+++++.|+++|++|+++.|+.... +..                        .+..+.+..    .
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------------------------~~~~~~~~~----~   55 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDK------------------------VQMLLYFKQ----L   55 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHH------------------------HHHHHHHHT----T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhH------------------------HHHHHHHHh----C
Confidence            47899999999999999999999999999999985321 000                        011111211    1


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+..+.+|++|++++.++++       ++|+|||++|...
T Consensus        56 ~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~~   88 (313)
T 1qyd_A           56 GAKLIEASLDDHQRLVDALK-------QVDVVISALAGGV   88 (313)
T ss_dssp             TCEEECCCSSCHHHHHHHHT-------TCSEEEECCCCSS
T ss_pred             CeEEEeCCCCCHHHHHHHHh-------CCCEEEECCcccc
Confidence            46788999999999888876       5999999999764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.27  E-value=1.6e-11  Score=88.41  Aligned_cols=84  Identities=14%  Similarity=0.130  Sum_probs=64.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++++|||++|+||+++++.|+++|++|+++.|+.......                        ....+.+..    ..+
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~------------------------~~~~~~l~~----~~v   62 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSK------------------------AKIFKALED----KGA   62 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHH------------------------HHHHHHHHH----TTC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhH------------------------HHHHHHHHh----CCc
Confidence            6899999999999999999999999999999986321100                        011122221    157


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .++.+|++|++++.+++++     .++|+|||++|..
T Consensus        63 ~~~~~Dl~d~~~l~~~~~~-----~~~d~Vi~~a~~~   94 (346)
T 3i6i_A           63 IIVYGLINEQEAMEKILKE-----HEIDIVVSTVGGE   94 (346)
T ss_dssp             EEEECCTTCHHHHHHHHHH-----TTCCEEEECCCGG
T ss_pred             EEEEeecCCHHHHHHHHhh-----CCCCEEEECCchh
Confidence            7889999999999998886     2799999999873

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.27  E-value=8.1e-12  Score=87.38  Aligned_cols=75  Identities=24%  Similarity=0.331  Sum_probs=60.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc--CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK--GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+++|||++|+||+++++.|+++  |++|++++|+....                               +.+..    .
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------------------------~~l~~----~   45 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA-------------------------------STLAD----Q   45 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT-------------------------------HHHHH----T
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH-------------------------------hHHhh----c
Confidence            46899999999999999999998  99999999976533                               11111    1


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .+.++.+|++|++++.++++       ++|++||+||..
T Consensus        46 ~~~~~~~D~~d~~~l~~~~~-------~~d~vi~~a~~~   77 (287)
T 2jl1_A           46 GVEVRHGDYNQPESLQKAFA-------GVSKLLFISGPH   77 (287)
T ss_dssp             TCEEEECCTTCHHHHHHHTT-------TCSEEEECCCCC
T ss_pred             CCeEEEeccCCHHHHHHHHh-------cCCEEEEcCCCC
Confidence            45678999999999888776       589999999863

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.27  E-value=3.9e-11  Score=85.73  Aligned_cols=81  Identities=17%  Similarity=0.227  Sum_probs=61.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHc---C---CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcC
Q psy7029           4 IIVVTGASVGIGAAILRALAAK---G---HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKEN   77 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~---g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (125)
                      +++|||++|+||++++++|+++   |   ++|++++|+.....                          ...+..+.   
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--------------------------~~~~~~~~---   52 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--------------------------RANLAPVD---   52 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--------------------------GGGGGGGT---
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--------------------------hhhhhhcc---
Confidence            6899999999999999999997   8   99999998643110                          00011111   


Q ss_pred             CCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          78 PDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        78 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ...++.++.+|++|++++.+++       .++|+||||||...
T Consensus        53 ~~~~~~~~~~Dl~d~~~~~~~~-------~~~d~Vih~A~~~~   88 (337)
T 1r6d_A           53 ADPRLRFVHGDIRDAGLLAREL-------RGVDAIVHFAAESH   88 (337)
T ss_dssp             TCTTEEEEECCTTCHHHHHHHT-------TTCCEEEECCSCCC
T ss_pred             cCCCeEEEEcCCCCHHHHHHHh-------cCCCEEEECCCccC
Confidence            1236788999999999888776       47999999999764

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.26  E-value=1.1e-11  Score=90.20  Aligned_cols=79  Identities=18%  Similarity=0.159  Sum_probs=63.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++|||++|+||.+++++|+++| ++|++++|+.....                              +.+.   ...
T Consensus        32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------------------------------~~l~---~~~   78 (377)
T 2q1s_A           32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK------------------------------INVP---DHP   78 (377)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG------------------------------GGSC---CCT
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch------------------------------hhcc---CCC
Confidence            5789999999999999999999999 99999999764220                              0110   122


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+.++.+|++|++++.++++       ++|+|||+||...
T Consensus        79 ~v~~~~~Dl~d~~~l~~~~~-------~~d~Vih~A~~~~  111 (377)
T 2q1s_A           79 AVRFSETSITDDALLASLQD-------EYDYVFHLATYHG  111 (377)
T ss_dssp             TEEEECSCTTCHHHHHHCCS-------CCSEEEECCCCSC
T ss_pred             ceEEEECCCCCHHHHHHHhh-------CCCEEEECCCccC
Confidence            67888999999988777665       7999999999764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.26  E-value=3.5e-11  Score=85.99  Aligned_cols=77  Identities=14%  Similarity=0.177  Sum_probs=60.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|||++|+||.+++++|+++ |++|++++|+....                               ..+.   ....
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~-------------------------------~~~~---~~~~   46 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-------------------------------SRFL---NHPH   46 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG-------------------------------GGGT---TCTT
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchH-------------------------------HHhh---cCCC
Confidence            37899999999999999999998 89999999986533                               1111   1125


Q ss_pred             eeEEEecCCCh-HHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKD-AEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~-~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|. +.+.++++       ++|+|||+||...
T Consensus        47 ~~~~~~D~~~~~~~~~~~~~-------~~d~vih~A~~~~   79 (345)
T 2bll_A           47 FHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIAT   79 (345)
T ss_dssp             EEEEECCTTTCSHHHHHHHH-------HCSEEEECBCCCC
T ss_pred             eEEEeccccCcHHHHHhhcc-------CCCEEEEcccccC
Confidence            77889999984 56777665       5899999999764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.26  E-value=2.4e-11  Score=86.03  Aligned_cols=77  Identities=25%  Similarity=0.246  Sum_probs=61.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||++++++|+++|++|++++|......                              ..+    . ..+.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~------------------------------~~~----~-~~~~   46 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR------------------------------ENV----P-KGVP   46 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG------------------------------GGS----C-TTCC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch------------------------------hhc----c-cCeE
Confidence            6899999999999999999999999999988543110                              111    0 1456


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.+|++|++++.++++.     .++|++||+|+...
T Consensus        47 ~~~~Dl~~~~~~~~~~~~-----~~~d~vi~~a~~~~   78 (311)
T 2p5y_A           47 FFRVDLRDKEGVERAFRE-----FRPTHVSHQAAQAS   78 (311)
T ss_dssp             EECCCTTCHHHHHHHHHH-----HCCSEEEECCSCCC
T ss_pred             EEECCCCCHHHHHHHHHh-----cCCCEEEECccccC
Confidence            788999999999888875     27999999999754

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.26  E-value=2.1e-11  Score=86.01  Aligned_cols=83  Identities=22%  Similarity=0.317  Sum_probs=63.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh--hHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI--DFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +++++|||++|++|.++++.|+++|++|+++.|+....  +..                        .+..+.+..    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~------------------------~~~~~~l~~----   55 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK------------------------AQLLESFKA----   55 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH------------------------HHHHHHHHT----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHH------------------------HHHHHHHHh----
Confidence            47899999999999999999999999999999975421  000                        011122211    


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ..+..+.+|++|++++.++++       ++|+|||+++..
T Consensus        56 ~~v~~v~~D~~d~~~l~~~~~-------~~d~vi~~a~~~   88 (308)
T 1qyc_A           56 SGANIVHGSIDDHASLVEAVK-------NVDVVISTVGSL   88 (308)
T ss_dssp             TTCEEECCCTTCHHHHHHHHH-------TCSEEEECCCGG
T ss_pred             CCCEEEEeccCCHHHHHHHHc-------CCCEEEECCcch
Confidence            146778999999999988887       599999999864

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.24  E-value=1.7e-11  Score=88.29  Aligned_cols=79  Identities=16%  Similarity=0.234  Sum_probs=63.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-----CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-----HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE   76 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
                      +++++||||+|+||.+++++|+++|     ++|++++|+....                               .     
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~-------------------------------~-----   44 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA-------------------------------W-----   44 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCS-------------------------------C-----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcc-------------------------------c-----
Confidence            5789999999999999999999999     9999999986532                               0     


Q ss_pred             CCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          77 NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        77 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ....++.++.+|++|++++.++++.    .+++|++||+||...
T Consensus        45 ~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~~d~vih~a~~~~   84 (364)
T 2v6g_A           45 HEDNPINYVQCDISDPDDSQAKLSP----LTDVTHVFYVTWANR   84 (364)
T ss_dssp             CCSSCCEEEECCTTSHHHHHHHHTT----CTTCCEEEECCCCCC
T ss_pred             cccCceEEEEeecCCHHHHHHHHhc----CCCCCEEEECCCCCc
Confidence            0122577889999999988877763    224999999999764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.23  E-value=1.3e-12  Score=87.76  Aligned_cols=72  Identities=18%  Similarity=0.168  Sum_probs=57.8

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      |+++++|||++|+||+++++.|+++|+  +|++++|+....                                       
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---------------------------------------   44 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------------------------------------   44 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------------------------------------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---------------------------------------
Confidence            468999999999999999999999998  999999976410                                       


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..++.++.+|++|++++.+++         +|+||||||...
T Consensus        45 ~~~~~~~~~D~~~~~~~~~~~---------~d~vi~~a~~~~   77 (215)
T 2a35_A           45 HPRLDNPVGPLAELLPQLDGS---------IDTAFCCLGTTI   77 (215)
T ss_dssp             CTTEECCBSCHHHHGGGCCSC---------CSEEEECCCCCH
T ss_pred             CCCceEEeccccCHHHHHHhh---------hcEEEECeeecc
Confidence            114667788988877655443         899999999754

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.21  E-value=2.2e-11  Score=85.02  Aligned_cols=74  Identities=18%  Similarity=0.354  Sum_probs=57.9

Q ss_pred             EEEEecCCcchHHHHHHHHHHc--CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           4 IIVVTGASVGIGAAILRALAAK--GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++|||++|+||+++++.|+++  |++|++++|+....                               +.+...    .
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------------------------~~~~~~----~   45 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-------------------------------QALAAQ----G   45 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-------------------------------HHHHHT----T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-------------------------------hhhhcC----C
Confidence            3799999999999999999998  99999999986533                               111111    3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|++|++++.++++       ++|++||+||..
T Consensus        46 ~~~~~~D~~d~~~~~~~~~-------~~d~vi~~a~~~   76 (286)
T 2zcu_A           46 ITVRQADYGDEAALTSALQ-------GVEKLLLISSSE   76 (286)
T ss_dssp             CEEEECCTTCHHHHHHHTT-------TCSEEEECC---
T ss_pred             CeEEEcCCCCHHHHHHHHh-------CCCEEEEeCCCC
Confidence            5678999999999888775       589999999863

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.21  E-value=1.2e-11  Score=91.41  Aligned_cols=94  Identities=20%  Similarity=0.163  Sum_probs=61.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++++|||||+|+||+++++.|++.|++|+++.|+.........+.........             ......   . ..+
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~-------------~~~~~~---~-~~~  131 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFS-------------EETVEM---M-LSN  131 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSC-------------HHHHHH---H-HTT
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhcc-------------cccccc---c-cCc
Confidence            57999999999999999999999999999999987643222111111100000             000000   0 126


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++.+.        .++++|+||||||...
T Consensus       132 v~~v~~Dl~d~~~l~--------~~~~~d~Vih~A~~~~  162 (427)
T 4f6c_A          132 IEVIVGDFECMDDVV--------LPENMDTIIHAGARTD  162 (427)
T ss_dssp             EEEEEECC---CCCC--------CSSCCSEEEECCCCC-
T ss_pred             eEEEeCCCCCcccCC--------CcCCCCEEEECCcccC
Confidence            888999999988876        4579999999999864

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.20  E-value=9e-11  Score=85.08  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=62.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||+++++.|+++|++|+++.|+.+...                             .+.+...   ..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----------------------------~~~l~~~---~~   52 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-----------------------------AEELQAI---PN   52 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-----------------------------HHHHHTS---TT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh-----------------------------HHHHhhc---CC
Confidence            578999999999999999999999999999999865320                             0112111   14


Q ss_pred             eeEEEec-CCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVD-VTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~D-v~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +..+.+| ++|++++.++++       .+|++|||++..
T Consensus        53 v~~v~~D~l~d~~~l~~~~~-------~~d~Vi~~a~~~   84 (352)
T 1xgk_A           53 VTLFQGPLLNNVPLMDTLFE-------GAHLAFINTTSQ   84 (352)
T ss_dssp             EEEEESCCTTCHHHHHHHHT-------TCSEEEECCCST
T ss_pred             cEEEECCccCCHHHHHHHHh-------cCCEEEEcCCCC
Confidence            6778999 999999888776       589999998754

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.19  E-value=9.3e-11  Score=82.01  Aligned_cols=73  Identities=16%  Similarity=0.233  Sum_probs=58.0

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |+++++|||+ |+||.++++.|+++|++|+++.|+....                               ..+..    .
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------------------------~~~~~----~   47 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQM-------------------------------EAIRA----S   47 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGH-------------------------------HHHHH----T
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhh-------------------------------hhHhh----C
Confidence            6789999998 9999999999999999999999987644                               22211    1


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .+.++.+|++|.+            +.++|+|||+|+....
T Consensus        48 ~~~~~~~D~~d~~------------~~~~d~vi~~a~~~~~   76 (286)
T 3ius_A           48 GAEPLLWPGEEPS------------LDGVTHLLISTAPDSG   76 (286)
T ss_dssp             TEEEEESSSSCCC------------CTTCCEEEECCCCBTT
T ss_pred             CCeEEEecccccc------------cCCCCEEEECCCcccc
Confidence            5778899999843            4579999999997653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.18  E-value=9.3e-11  Score=81.33  Aligned_cols=68  Identities=29%  Similarity=0.362  Sum_probs=57.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||++++++|++ |++|++++|+.. .                               .      .  .  
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~-~-------------------------------~------~--~--   38 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSE-I-------------------------------Q------G--G--   38 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSC-C-------------------------------T------T--C--
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCc-C-------------------------------C------C--C--
Confidence            689999999999999999995 899999999752 1                               0      1  1  


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       +.+|++|++++.++++..     ++|+||||||...
T Consensus        39 -~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~   69 (273)
T 2ggs_A           39 -YKLDLTDFPRLEDFIIKK-----RPDVIINAAAMTD   69 (273)
T ss_dssp             -EECCTTSHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             -ceeccCCHHHHHHHHHhc-----CCCEEEECCcccC
Confidence             789999999999988864     6999999999765

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.18  E-value=1.3e-11  Score=86.61  Aligned_cols=72  Identities=24%  Similarity=0.397  Sum_probs=60.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++||| +|+||.++++.|+++|++|++++|+.+..                                       ...
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------------------------------~~~   42 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------------------------------PAG   42 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------------------------------CTT
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------------------------------ccC
Confidence            57899999 59999999999999999999999976422                                       125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|++|++++.++++      +++|+|||+||..
T Consensus        43 ~~~~~~Dl~d~~~~~~~~~------~~~d~vih~a~~~   74 (286)
T 3gpi_A           43 VQTLIADVTRPDTLASIVH------LRPEILVYCVAAS   74 (286)
T ss_dssp             CCEEECCTTCGGGCTTGGG------GCCSEEEECHHHH
T ss_pred             CceEEccCCChHHHHHhhc------CCCCEEEEeCCCC
Confidence            6788999999998877765      3699999999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.17  E-value=1.7e-10  Score=70.51  Aligned_cols=76  Identities=24%  Similarity=0.251  Sum_probs=60.5

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      |+++++|+|+ |++|..+++.|.+.| ++|++++|+++..                               +.+..    
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~-------------------------------~~~~~----   47 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAAL-------------------------------AVLNR----   47 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHH-------------------------------HHHHT----
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHH-------------------------------HHHHh----
Confidence            4678999999 999999999999999 8999999987644                               22221    


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ..+..+.+|+.+.+.+.++++       .+|++|++++..
T Consensus        48 ~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~~~~~   80 (118)
T 3ic5_A           48 MGVATKQVDAKDEAGLAKALG-------GFDAVISAAPFF   80 (118)
T ss_dssp             TTCEEEECCTTCHHHHHHHTT-------TCSEEEECSCGG
T ss_pred             CCCcEEEecCCCHHHHHHHHc-------CCCEEEECCCch
Confidence            135567899999988777664       799999999754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.17  E-value=7.5e-11  Score=83.50  Aligned_cols=71  Identities=28%  Similarity=0.354  Sum_probs=59.4

Q ss_pred             EEEEecCCcchHHHHHHHHHHc--CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           4 IIVVTGASVGIGAAILRALAAK--GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++|||++|+||.+++++|+++  |++|++++|+....                               .         .
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------------------------~---------~   40 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------------------------G---------G   40 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------------------------T---------T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------------------------c---------C
Confidence            3799999999999999999998  89999999875421                               0         2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +.++.+|++|++++.++++.     .++|+|||+||..
T Consensus        41 ~~~~~~D~~d~~~~~~~~~~-----~~~d~vih~a~~~   73 (317)
T 3ajr_A           41 IKFITLDVSNRDEIDRAVEK-----YSIDAIFHLAGIL   73 (317)
T ss_dssp             CCEEECCTTCHHHHHHHHHH-----TTCCEEEECCCCC
T ss_pred             ceEEEecCCCHHHHHHHHhh-----cCCcEEEECCccc
Confidence            45788999999999888875     3799999999975

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.16  E-value=3.6e-11  Score=86.65  Aligned_cols=82  Identities=18%  Similarity=0.370  Sum_probs=60.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++||||+|+||.++++.|+++| ++|++++|+.....                             ...+    .. 
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----------------------------~~~~----~~-   91 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----------------------------FVNL----VD-   91 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-----------------------------GGGT----TT-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-----------------------------hhcc----cC-
Confidence            4789999999999999999999999 99999999754220                             0111    11 


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       +. +.+|++|++.+.++++.  ..++++|+||||||....
T Consensus        92 -~~-~~~d~~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~  128 (357)
T 2x6t_A           92 -LN-IADYMDKEDFLIQIMAG--EEFGDVEAIFHEGACSST  128 (357)
T ss_dssp             -SC-CSEEEEHHHHHHHHHTT--CCCSSCCEEEECCSCCCT
T ss_pred             -ce-EeeecCcHHHHHHHHhh--cccCCCCEEEECCcccCC
Confidence             12 57899999888877763  235689999999998653

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.15  E-value=4.3e-11  Score=84.76  Aligned_cols=74  Identities=16%  Similarity=0.188  Sum_probs=55.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|||||+|+||++++++|+++|..+++..++....                               ..+     ...+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~-------------------------------~~~-----~~~~   45 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNE-------------------------------EFV-----NEAA   45 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCG-------------------------------GGS-----CTTE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCCh-------------------------------hhc-----CCCc
Confidence            7899999999999999999999995444444443221                               101     1257


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|+++ +++.++++       ++|++||+|+...
T Consensus        46 ~~~~~Dl~~-~~~~~~~~-------~~d~vih~a~~~~   75 (313)
T 3ehe_A           46 RLVKADLAA-DDIKDYLK-------GAEEVWHIAANPD   75 (313)
T ss_dssp             EEECCCTTT-SCCHHHHT-------TCSEEEECCCCCC
T ss_pred             EEEECcCCh-HHHHHHhc-------CCCEEEECCCCCC
Confidence            788999999 88877776       7999999999643

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.15  E-value=1.7e-10  Score=89.73  Aligned_cols=78  Identities=15%  Similarity=0.218  Sum_probs=61.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++|||++|+||.+++++|+++ |++|++++|+....                               ..+.   ...
T Consensus       315 ~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~-------------------------------~~~~---~~~  360 (660)
T 1z7e_A          315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-------------------------------SRFL---NHP  360 (660)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTT-------------------------------GGGT---TCT
T ss_pred             CceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhh-------------------------------hhhc---cCC
Confidence            578999999999999999999998 89999999986533                               1111   122


Q ss_pred             eeeEEEecCCChHH-HHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAE-VVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~-v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|++|.++ +.++++       ++|+||||||...
T Consensus       361 ~v~~v~~Dl~d~~~~~~~~~~-------~~D~Vih~Aa~~~  394 (660)
T 1z7e_A          361 HFHFVEGDISIHSEWIEYHVK-------KCDVVLPLVAIAT  394 (660)
T ss_dssp             TEEEEECCTTTCHHHHHHHHH-------HCSEEEECCCCCC
T ss_pred             ceEEEECCCCCcHHHHHHhhc-------CCCEEEECceecC
Confidence            57788999999865 555665       5899999999765

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.14  E-value=2.6e-11  Score=85.76  Aligned_cols=74  Identities=20%  Similarity=0.148  Sum_probs=58.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++||||++|+||+++++.|+++|++|++++|+....                               ....    ...+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------------------------------~~~~----~~~~   45 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR-------------------------------REFV----NPSA   45 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC-------------------------------GGGS----CTTS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc-------------------------------hhhc----CCCc
Confidence            4689999999999999999999999999999976533                               1110    1256


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|.+ +.++++       . |+||||||...
T Consensus        46 ~~~~~Dl~d~~-~~~~~~-------~-d~vih~A~~~~   74 (312)
T 3ko8_A           46 ELHVRDLKDYS-WGAGIK-------G-DVVFHFAANPE   74 (312)
T ss_dssp             EEECCCTTSTT-TTTTCC-------C-SEEEECCSSCS
T ss_pred             eEEECccccHH-HHhhcC-------C-CEEEECCCCCC
Confidence            78899999987 655543       3 99999999643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.14  E-value=1.1e-10  Score=81.80  Aligned_cols=64  Identities=28%  Similarity=0.324  Sum_probs=56.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .++++|||++|+||.++++.|+++|++|++++|+                                              
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------------------------   45 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------------------------------   45 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------------------------------
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------------------------------
Confidence            3689999999999999999999999999999873                                              


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                          .+|++|++++.++++..     ++|+||||||...
T Consensus        46 ----~~Dl~d~~~~~~~~~~~-----~~d~vih~A~~~~   75 (292)
T 1vl0_A           46 ----DLDITNVLAVNKFFNEK-----KPNVVINCAAHTA   75 (292)
T ss_dssp             ----TCCTTCHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             ----cCCCCCHHHHHHHHHhc-----CCCEEEECCccCC
Confidence                26999999998888764     7999999999764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.13  E-value=6.2e-11  Score=82.95  Aligned_cols=62  Identities=19%  Similarity=0.359  Sum_probs=55.9

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||.++++.|+++|++|++++|.                                                
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------------------------------   38 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------------------------------------   38 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------------------------------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------------------------------------
Confidence            89999999999999999999999999999871                                                


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                        ++|++|++++.++++..     ++|+|||+||...
T Consensus        39 --~~D~~d~~~~~~~~~~~-----~~d~vi~~a~~~~   68 (287)
T 3sc6_A           39 --LLDITNISQVQQVVQEI-----RPHIIIHCAAYTK   68 (287)
T ss_dssp             --TSCTTCHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             --ccCCCCHHHHHHHHHhc-----CCCEEEECCcccC
Confidence              26999999999988865     7999999999875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.11  E-value=3.2e-10  Score=81.28  Aligned_cols=77  Identities=17%  Similarity=0.170  Sum_probs=58.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||++++++|+++|++|++++|+.....                           ......   ....+
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------------------~~~~~~---~~~~~   76 (343)
T 2b69_A           27 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK---------------------------RNVEHW---IGHEN   76 (343)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---------------------------GGTGGG---TTCTT
T ss_pred             CCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccch---------------------------hhhhhh---ccCCc
Confidence            578999999999999999999999999999999754220                           000111   11225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+.++.            +.++|+|||+||...
T Consensus        77 ~~~~~~D~~~~~------------~~~~d~vih~A~~~~  103 (343)
T 2b69_A           77 FELINHDVVEPL------------YIEVDQIYHLASPAS  103 (343)
T ss_dssp             EEEEECCTTSCC------------CCCCSEEEECCSCCS
T ss_pred             eEEEeCccCChh------------hcCCCEEEECccccC
Confidence            778899998763            457999999999764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.06  E-value=4.6e-10  Score=79.56  Aligned_cols=65  Identities=20%  Similarity=0.267  Sum_probs=56.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||.+++++|+++|++|+++.|+.                                             
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------------------------   37 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------------------------   37 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------------------------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------------------------
Confidence            57899999999999999999999999998887631                                             


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                          .+|++|++++.++++..     ++|+|||+||...
T Consensus        38 ----~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~   67 (321)
T 1e6u_A           38 ----ELNLLDSRAVHDFFASE-----RIDQVYLAAAKVG   67 (321)
T ss_dssp             ----TCCTTCHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             ----cCCccCHHHHHHHHHhc-----CCCEEEEcCeecC
Confidence                25999999998888754     6999999999764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.06  E-value=5.5e-11  Score=84.09  Aligned_cols=36  Identities=31%  Similarity=0.371  Sum_probs=34.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +++++|||++|+||.++++.|+++|++|++++|+..
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            689999999999999999999999999999999765

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.03  E-value=6.9e-10  Score=77.94  Aligned_cols=65  Identities=22%  Similarity=0.281  Sum_probs=56.3

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|||++|+||.++++.|+ +|++|++++|+..                                              
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------------------------------   34 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------------------------------   34 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------------------------------
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------------------------------
Confidence            68999999999999999999 8999999988531                                              


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+.+|++|++++.++++..     ++|+|||+||...
T Consensus        35 ~~~~D~~d~~~~~~~~~~~-----~~d~vih~a~~~~   66 (299)
T 1n2s_A           35 EFCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTA   66 (299)
T ss_dssp             SSCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             cccccCCCHHHHHHHHHhc-----CCCEEEECcccCC
Confidence            2468999999999888753     6999999999764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.03  E-value=8.3e-10  Score=71.72  Aligned_cols=82  Identities=13%  Similarity=0.069  Sum_probs=61.3

Q ss_pred             cchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeEEEecCCC
Q psy7029          12 VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTK   91 (125)
Q Consensus        12 ~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   91 (125)
                      +-++.+.++.|++.|++|++..|+.......                        ....+.+. .. +.++..+++|+++
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~------------------------~~~~~~~~-~~-G~~~~~i~~Dv~~   79 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAH------------------------PDEGKLVT-QA-GMDYVYIPVDWQN   79 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSC------------------------TTHHHHHH-HT-TCEEEECCCCTTS
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCccccccc------------------------ccHHHHHH-Hc-CCeEEEecCCCCC
Confidence            4578899999999999999998865432100                        00011121 12 3478888999999


Q ss_pred             h--HHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          92 D--AEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        92 ~--~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +  +++.++++.+.+.+|+ |+||||||+..
T Consensus        80 ~~~~~v~~~~~~i~~~~G~-dVLVnnAgg~r  109 (157)
T 3gxh_A           80 PKVEDVEAFFAAMDQHKGK-DVLVHCLANYR  109 (157)
T ss_dssp             CCHHHHHHHHHHHHHTTTS-CEEEECSBSHH
T ss_pred             CCHHHHHHHHHHHHhcCCC-CEEEECCCCCC
Confidence            9  9999999999999999 99999999753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.98  E-value=3.6e-10  Score=85.28  Aligned_cols=94  Identities=18%  Similarity=0.157  Sum_probs=63.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|||++|+||.+++++|.+.|++|+++.|+.........+........   .             ....... ..+
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~---~-------------~~~~~~~-~~~  212 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYF---S-------------EETVEMM-LSN  212 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHS---C-------------HHHHHHH-STT
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhc---c-------------cccchhc-cCc
Confidence            3789999999999999999999999999999998764322111111110000   0             0000011 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+++++.+.        ...++|+|||||+...
T Consensus       213 v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~~~  243 (508)
T 4f6l_B          213 IEVIVGDFECMDDVV--------LPENMDTIIHAGARTD  243 (508)
T ss_dssp             EEEEEEBTTBCSSCC--------CSSCCSEEEECCCC--
T ss_pred             eEEEecCCcccccCC--------CccCCCEEEECCceec
Confidence            889999999988766        3468999999999864

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.98  E-value=5.2e-09  Score=77.34  Aligned_cols=83  Identities=16%  Similarity=0.206  Sum_probs=63.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC---CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG---HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +.++|+|+ |++|+.+++.|++.|   ..|++++|+.+...                           +..+.+.... +
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~---------------------------~la~~l~~~~-~   52 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQ---------------------------EIAQSIKAKG-Y   52 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHH---------------------------HHHHHHHHTT-C
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHH---------------------------HHHHHhhhhc-C
Confidence            67888998 799999999999998   38999999876552                           1112222211 1


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .++..+.+|++|.+++.++++..     ++|+||||++..
T Consensus        53 ~~~~~~~~D~~d~~~l~~~l~~~-----~~DvVin~ag~~   87 (405)
T 4ina_A           53 GEIDITTVDADSIEELVALINEV-----KPQIVLNIALPY   87 (405)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHH-----CCSEEEECSCGG
T ss_pred             CceEEEEecCCCHHHHHHHHHhh-----CCCEEEECCCcc
Confidence            25778899999999999999875     699999999864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.98  E-value=7.9e-10  Score=77.83  Aligned_cols=80  Identities=18%  Similarity=0.342  Sum_probs=58.3

Q ss_pred             EEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|||++|+||.++++.|+++| +.|++++|+.....                             ...+.      .+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----------------------------~~~~~------~~   45 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----------------------------FVNLV------DL   45 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-----------------------------GHHHH------TS
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-----------------------------hhhcC------cc
Confidence            37999999999999999999999 89999998764320                             01111      11


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      . +.+|++|.+.+.++++..  .++++|+|||+||....
T Consensus        46 ~-~~~d~~~~~~~~~~~~~~--~~~~~d~vi~~a~~~~~   81 (310)
T 1eq2_A           46 N-IADYMDKEDFLIQIMAGE--EFGDVEAIFHEGACSST   81 (310)
T ss_dssp             C-CSEEEEHHHHHHHHHTTC--CCSSCCEEEECCSCCCT
T ss_pred             e-eccccccHHHHHHHHhcc--ccCCCcEEEECcccccC
Confidence            1 568999888877776521  02369999999998653

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=98.94  E-value=1.1e-09  Score=76.88  Aligned_cols=69  Identities=28%  Similarity=0.215  Sum_probs=54.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |++++||||++|+||+++++.|+++|+      +...                                        ...
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~----------------------------------------~~~   38 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPGE----------------------------------------DWV   38 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC----------------------------------------EEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC------cccc----------------------------------------ccc
Confidence            368999999999999999999999997      1110                                        001


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+..+.+|++|++.+.++++..     ++|+|||+|+...
T Consensus        39 ~~~~~~~D~~d~~~~~~~~~~~-----~~d~Vih~A~~~~   73 (319)
T 4b8w_A           39 FVSSKDADLTDTAQTRALFEKV-----QPTHVIHLAAMVG   73 (319)
T ss_dssp             ECCTTTCCTTSHHHHHHHHHHS-----CCSEEEECCCCCC
T ss_pred             ccCceecccCCHHHHHHHHhhc-----CCCEEEECceecc
Confidence            3344578999999999988852     6999999999854

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.91  E-value=7e-09  Score=77.66  Aligned_cols=77  Identities=19%  Similarity=0.223  Sum_probs=59.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|+| +|++|+++++.|++.|++|++++|+.+..                               +.+.....  .
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a-------------------------------~~la~~~~--~   48 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESA-------------------------------KKLSAGVQ--H   48 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHH-------------------------------HHTTTTCT--T
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHH-------------------------------HHHHHhcC--C
Confidence            67899998 79999999999999999999999986543                               22222221  3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      +..+.+|++|.+++.++++       .+|+||||++..
T Consensus        49 ~~~~~~Dv~d~~~l~~~l~-------~~DvVIn~a~~~   79 (450)
T 1ff9_A           49 STPISLDVNDDAALDAEVA-------KHDLVISLIPYT   79 (450)
T ss_dssp             EEEEECCTTCHHHHHHHHT-------TSSEEEECCC--
T ss_pred             ceEEEeecCCHHHHHHHHc-------CCcEEEECCccc
Confidence            5677899999988877764       699999999874

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.89  E-value=9.2e-09  Score=68.53  Aligned_cols=38  Identities=16%  Similarity=0.221  Sum_probs=34.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++|+|..+++.+...|++|++++++++..
T Consensus        39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~   76 (198)
T 1pqw_A           39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR   76 (198)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred             CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            68999999999999999999999999999999986543

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.86  E-value=8.9e-09  Score=73.80  Aligned_cols=79  Identities=19%  Similarity=0.231  Sum_probs=57.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |++++|||+++|+|..+++.+...|++|++++++.+..                               +.+. .... .
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-------------------------------~~~~-~~g~-~  192 (333)
T 1v3u_A          146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-------------------------------AYLK-QIGF-D  192 (333)
T ss_dssp             SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-------------------------------HHHH-HTTC-S
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-------------------------------HHHH-hcCC-c
Confidence            68999999999999999999999999999999986544                               1121 1111 1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCccc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV  118 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~  118 (125)
                         ..+|.++.+++.+.+.+...  +++|++|+|+|.
T Consensus       193 ---~~~d~~~~~~~~~~~~~~~~--~~~d~vi~~~g~  224 (333)
T 1v3u_A          193 ---AAFNYKTVNSLEEALKKASP--DGYDCYFDNVGG  224 (333)
T ss_dssp             ---EEEETTSCSCHHHHHHHHCT--TCEEEEEESSCH
T ss_pred             ---EEEecCCHHHHHHHHHHHhC--CCCeEEEECCCh
Confidence               23577774455555555433  579999999984

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.78  E-value=1.1e-08  Score=77.51  Aligned_cols=36  Identities=28%  Similarity=0.478  Sum_probs=33.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++++|||||+|+||.++++.|+++|++|++++|+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~  182 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP  182 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            468999999999999999999999999999999865

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.71  E-value=7.1e-08  Score=69.56  Aligned_cols=79  Identities=19%  Similarity=0.250  Sum_probs=57.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |++++|+|+++|+|+.+++.+...|++|++++++.+..                               +.+.. ... .
T Consensus       170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-------------------------------~~~~~-~g~-~  216 (347)
T 2hcy_A          170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-------------------------------ELFRS-IGG-E  216 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-------------------------------HHHHH-TTC-C
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-------------------------------HHHHH-cCC-c
Confidence            68999999999999999999999999999999886644                               11111 111 1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCccc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGV  118 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~  118 (125)
                         ..+|+++.+++.+.+.++...  ++|++|+|+|.
T Consensus       217 ---~~~d~~~~~~~~~~~~~~~~~--~~D~vi~~~g~  248 (347)
T 2hcy_A          217 ---VFIDFTKEKDIVGAVLKATDG--GAHGVINVSVS  248 (347)
T ss_dssp             ---EEEETTTCSCHHHHHHHHHTS--CEEEEEECSSC
T ss_pred             ---eEEecCccHhHHHHHHHHhCC--CCCEEEECCCc
Confidence               234777656666666655433  79999999985

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.67  E-value=1.1e-07  Score=71.52  Aligned_cols=76  Identities=22%  Similarity=0.275  Sum_probs=59.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +++++|+|+ |++|+++++.|++. +++|++++|+.+..                               +.+... .  
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka-------------------------------~~la~~-~--   67 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANA-------------------------------QALAKP-S--   67 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHH-------------------------------HHHHGG-G--
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHH-------------------------------HHHHHh-c--
Confidence            578999997 99999999999998 78999999987644                               222222 1  


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .+..+.+|+.|.+++.++++       .+|+|||+++..
T Consensus        68 ~~~~~~~D~~d~~~l~~~l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           68 GSKAISLDVTDDSALDKVLA-------DNDVVISLIPYT   99 (467)
T ss_dssp             TCEEEECCTTCHHHHHHHHH-------TSSEEEECSCGG
T ss_pred             CCcEEEEecCCHHHHHHHHc-------CCCEEEECCchh
Confidence            23456789999988877765       699999999875

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.67  E-value=7.2e-08  Score=69.74  Aligned_cols=31  Identities=26%  Similarity=0.358  Sum_probs=28.3

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC-eEEEeec
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH-QVIGFAR   34 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r   34 (125)
                      +++||||+|+||++++++|+++|+ +|++++|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~   33 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR   33 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence            689999999999999999999998 8877766

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.64  E-value=1e-07  Score=68.08  Aligned_cols=38  Identities=21%  Similarity=0.265  Sum_probs=34.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++|+|..+++.+...|++|++++++++..
T Consensus       141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~  178 (327)
T 1qor_A          141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA  178 (327)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            68999999999999999999999999999999986544

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.63  E-value=1.5e-07  Score=67.39  Aligned_cols=38  Identities=21%  Similarity=0.322  Sum_probs=34.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++|+|..+++.+...|++|++++++++..
T Consensus       146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~  183 (333)
T 1wly_A          146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA  183 (333)
T ss_dssp             TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            68999999999999999999999999999999987544

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.60  E-value=1.3e-07  Score=68.03  Aligned_cols=38  Identities=24%  Similarity=0.298  Sum_probs=34.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++|+|..+++.+...|++|++++++.+..
T Consensus       156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~  193 (345)
T 2j3h_A          156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKV  193 (345)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            68999999999999999999999999999999986544

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.57  E-value=3.4e-08  Score=69.78  Aligned_cols=36  Identities=33%  Similarity=0.365  Sum_probs=32.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +|+++|||++ |+|+++++.|++.| +|++++|+.+..
T Consensus       128 ~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~  163 (287)
T 1nvt_A          128 DKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKA  163 (287)
T ss_dssp             SCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred             CCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHH
Confidence            6899999987 99999999999999 999999987644

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.56  E-value=3.7e-07  Score=57.53  Aligned_cols=37  Identities=27%  Similarity=0.472  Sum_probs=32.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ |.+|..+++.|.++|++|++++++++..
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~   42 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKI   42 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            467899997 6699999999999999999999987644

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.55  E-value=3e-07  Score=66.48  Aligned_cols=38  Identities=13%  Similarity=0.242  Sum_probs=34.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++|+|..+++.+...|++|++++++++..
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~  200 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL  200 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            68999999999999999999999999999999987644

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.54  E-value=2.3e-07  Score=58.20  Aligned_cols=36  Identities=28%  Similarity=0.436  Sum_probs=32.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +++++|+|+ |++|..+++.|.+.|++|++++++++.
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~   41 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK   41 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            467999997 999999999999999999999997653

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.53  E-value=3.4e-07  Score=66.14  Aligned_cols=37  Identities=27%  Similarity=0.306  Sum_probs=33.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++++|+|+++|+|..+++.+...|+ +|++++++.+..
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~  199 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC  199 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH
Confidence            8999999999999999999999999 999999986544

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.53  E-value=4e-07  Score=63.96  Aligned_cols=34  Identities=32%  Similarity=0.490  Sum_probs=31.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++|||||+|.||.+++++|+++|++|+++.|++.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~   35 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG   35 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            4899999999999999999999999999999754

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.53  E-value=4.7e-07  Score=65.50  Aligned_cols=38  Identities=32%  Similarity=0.405  Sum_probs=34.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++|+|..+++.+...|++|++++++++..
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~  208 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ  208 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHH
Confidence            68999999999999999999999999999999987644

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.52  E-value=4.8e-07  Score=64.83  Aligned_cols=38  Identities=29%  Similarity=0.447  Sum_probs=34.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++|+|...++.+...|++|++++++++..
T Consensus       150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~  187 (336)
T 4b7c_A          150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKC  187 (336)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            78999999999999999999999999999999987644

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.48  E-value=6e-07  Score=64.66  Aligned_cols=38  Identities=32%  Similarity=0.552  Sum_probs=34.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|..+++.+... |++|++++++++..
T Consensus       171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~  209 (347)
T 1jvb_A          171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV  209 (347)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH
T ss_pred             CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            689999999999999999999998 99999999887644

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.45  E-value=2.6e-07  Score=70.36  Aligned_cols=37  Identities=38%  Similarity=0.417  Sum_probs=30.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +|+++|||+ +|+|+++++.|++.|++|++++|+.+..
T Consensus       364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a  400 (523)
T 2o7s_A          364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERA  400 (523)
T ss_dssp             --CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            578999999 4999999999999999999999987644

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.42  E-value=1.3e-06  Score=63.72  Aligned_cols=76  Identities=14%  Similarity=0.200  Sum_probs=54.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++++|+|+ |++|+.+++.+...|++|++++|+.+..                               +.+...... .
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~-------------------------------~~~~~~~g~-~  212 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRL-------------------------------QYLDDVFGG-R  212 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHTTT-S
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHH-------------------------------HHHHHhcCc-e
Confidence            578999998 8999999999999999999999987644                               111111111 2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                         +.+|..+.+++.+.+.       +.|++|++++...
T Consensus       213 ---~~~~~~~~~~l~~~~~-------~~DvVi~~~g~~~  241 (369)
T 2eez_A          213 ---VITLTATEANIKKSVQ-------HADLLIGAVLVPG  241 (369)
T ss_dssp             ---EEEEECCHHHHHHHHH-------HCSEEEECCC---
T ss_pred             ---EEEecCCHHHHHHHHh-------CCCEEEECCCCCc
Confidence               3456777777766654       5899999998653

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.42  E-value=2.9e-07  Score=64.55  Aligned_cols=37  Identities=22%  Similarity=0.168  Sum_probs=33.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ ||+|+++++.|++.|++|++++|+.+..
T Consensus       119 ~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~  155 (271)
T 1nyt_A          119 GLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA  155 (271)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHH
Confidence            689999998 6999999999999999999999987654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.40  E-value=1.7e-06  Score=62.57  Aligned_cols=38  Identities=21%  Similarity=0.353  Sum_probs=34.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+||++++|...++.+...|++|++++++++..
T Consensus       168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~  205 (353)
T 4dup_A          168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC  205 (353)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            68999999999999999999999999999999987654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.40  E-value=3.5e-06  Score=60.41  Aligned_cols=34  Identities=29%  Similarity=0.383  Sum_probs=31.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      +|+++|+|+ ||+|++++..|++.|+ +|++++|+.
T Consensus       154 gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~  188 (315)
T 3tnl_A          154 GKKMTICGA-GGAATAICIQAALDGVKEISIFNRKD  188 (315)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCC
Confidence            689999997 6999999999999998 899999983

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.31  E-value=3.4e-06  Score=60.62  Aligned_cols=38  Identities=21%  Similarity=0.305  Sum_probs=34.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+...|++|++++++++..
T Consensus       167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~  204 (343)
T 2eih_A          167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL  204 (343)
T ss_dssp             TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            67999999999999999999999999999999987644

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.29  E-value=3.2e-06  Score=62.87  Aligned_cols=38  Identities=21%  Similarity=0.337  Sum_probs=33.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+...|++|+++.+++++.
T Consensus       221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~  258 (447)
T 4a0s_A          221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE  258 (447)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            68999999999999999998888999999999876644

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.28  E-value=3.7e-07  Score=65.47  Aligned_cols=35  Identities=26%  Similarity=0.194  Sum_probs=30.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-------eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-------QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-------~v~~~~r~~   36 (125)
                      .++++|||++|+||.+++..|+++|+       +|+++++..
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~   45 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ   45 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence            35799999999999999999999986       799998864

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.26  E-value=4.1e-06  Score=59.92  Aligned_cols=38  Identities=24%  Similarity=0.389  Sum_probs=34.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+...|++|+++++++++.
T Consensus       149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~  186 (334)
T 3qwb_A          149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKL  186 (334)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            68999999999999999998888999999999987644

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.24  E-value=4.4e-06  Score=59.97  Aligned_cols=38  Identities=13%  Similarity=0.267  Sum_probs=34.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+...|++|++++++++..
T Consensus       145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~  182 (340)
T 3gms_A          145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT  182 (340)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            68999999999999999998888999999999987655

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.24  E-value=4e-06  Score=59.80  Aligned_cols=38  Identities=26%  Similarity=0.364  Sum_probs=34.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+...|++|+++++++++.
T Consensus       141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~  178 (325)
T 3jyn_A          141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKA  178 (325)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            68999999999999999999888999999999987654

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=98.18  E-value=5.3e-06  Score=59.39  Aligned_cols=36  Identities=28%  Similarity=0.345  Sum_probs=30.3

Q ss_pred             CcE-EEEecCCc-----------------c-hHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKI-IVVTGASV-----------------G-IGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~-~lItG~~~-----------------g-iG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||. +|||+|+.                 | .|.++|++++++|+.|+++.+...
T Consensus        36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            455 88887754                 5 999999999999999999998654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.16  E-value=5.9e-06  Score=61.65  Aligned_cols=38  Identities=21%  Similarity=0.245  Sum_probs=33.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|++|++|...+..+...|++++++.+++++.
T Consensus       229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~  266 (456)
T 3krt_A          229 GDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA  266 (456)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            67999999999999999988888899999998876644

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.14  E-value=1.1e-05  Score=51.40  Aligned_cols=34  Identities=15%  Similarity=0.221  Sum_probs=30.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      .+.++|.|+ |.+|..+++.|.+.|++|+++++++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~   36 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLP   36 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCC
Confidence            467888985 9999999999999999999999974

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.14  E-value=1.4e-05  Score=49.64  Aligned_cols=36  Identities=19%  Similarity=0.455  Sum_probs=31.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.++|+|+ |.+|..+++.|.+.|++|++++++++..
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~   40 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC   40 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            56788886 9999999999999999999999976543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.13  E-value=2.4e-05  Score=56.28  Aligned_cols=37  Identities=27%  Similarity=0.316  Sum_probs=33.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++++|+||++++|...++.+...|++|+++++++++.
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~  202 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI  202 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            7899999999999999998888899999999987654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.13  E-value=1.5e-05  Score=57.29  Aligned_cols=38  Identities=29%  Similarity=0.483  Sum_probs=34.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+...|++|++++++.+..
T Consensus       160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~  197 (342)
T 4eye_A          160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT  197 (342)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            68999999999999999999989999999999987654

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.11  E-value=1.2e-05  Score=56.77  Aligned_cols=37  Identities=24%  Similarity=0.267  Sum_probs=33.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.
T Consensus       127 ~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a  164 (283)
T 3jyo_A          127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA  164 (283)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHH
Confidence            689999997 7999999999999998 799999997755

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.09  E-value=2.5e-05  Score=56.07  Aligned_cols=37  Identities=19%  Similarity=0.319  Sum_probs=32.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|++|++++++++..
T Consensus       165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~  201 (339)
T 1rjw_A          165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL  201 (339)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            679999999 8899999998888999999999987654

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.08  E-value=1.6e-05  Score=57.66  Aligned_cols=38  Identities=26%  Similarity=0.290  Sum_probs=34.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+...|++|++++++++..
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~  201 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS  201 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            67999999999999999998888999999999986544

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.07  E-value=1.7e-05  Score=57.58  Aligned_cols=71  Identities=23%  Similarity=0.243  Sum_probs=54.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      +++|.|+ |++|+.+++.|++ .++|.+.+++.+..                               +.+..     .+.
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~-------------------------------~~~~~-----~~~   59 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENL-------------------------------EKVKE-----FAT   59 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHH-------------------------------HHHTT-----TSE
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHH-------------------------------HHHhc-----cCC
Confidence            5778898 9999999998875 57899999986644                               22211     244


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .+.+|+.|.+++.++++       ..|++||+++..
T Consensus        60 ~~~~d~~d~~~l~~~~~-------~~DvVi~~~p~~   88 (365)
T 3abi_A           60 PLKVDASNFDKLVEVMK-------EFELVIGALPGF   88 (365)
T ss_dssp             EEECCTTCHHHHHHHHT-------TCSEEEECCCGG
T ss_pred             cEEEecCCHHHHHHHHh-------CCCEEEEecCCc
Confidence            67889999999888776       589999998764

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.06  E-value=4.4e-05  Score=54.63  Aligned_cols=34  Identities=32%  Similarity=0.406  Sum_probs=31.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      +|+++|+|+ ||.|++++..|++.|+ +|.+++|+.
T Consensus       148 gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~  182 (312)
T 3t4e_A          148 GKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKD  182 (312)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCC
Confidence            689999996 8999999999999998 899999993

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.03  E-value=3.4e-05  Score=48.57  Aligned_cols=37  Identities=11%  Similarity=0.142  Sum_probs=32.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .+.++|.|+ |.+|..+++.|.+.|+.|++++++++..
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~   43 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRV   43 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence            467888986 7799999999999999999999987654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.01  E-value=3.9e-05  Score=49.01  Aligned_cols=37  Identities=27%  Similarity=0.402  Sum_probs=32.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.++|.|+ |.+|..+++.|.+.|++|++++|+++..
T Consensus        19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~   55 (155)
T 2g1u_A           19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAF   55 (155)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGG
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            568899985 8999999999999999999999987644

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.96  E-value=3.4e-05  Score=54.40  Aligned_cols=38  Identities=26%  Similarity=0.405  Sum_probs=34.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+...|++|++++++++..
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~  163 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL  163 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            68999999999999999998888999999999987654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.93  E-value=6.3e-05  Score=54.07  Aligned_cols=38  Identities=29%  Similarity=0.410  Sum_probs=34.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+||++++|...++.+...|++|+++++++++.
T Consensus       151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~  188 (346)
T 3fbg_A          151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI  188 (346)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            67899999999999999998888899999999987654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.91  E-value=2.6e-05  Score=56.51  Aligned_cols=34  Identities=24%  Similarity=0.279  Sum_probs=31.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      |++++|+|+ +++|...++.+...|++|++++++.
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~  214 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRRE  214 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            789999999 9999999998888999999999987

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.90  E-value=2.9e-05  Score=55.07  Aligned_cols=37  Identities=27%  Similarity=0.221  Sum_probs=33.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +++++|+|+ ||+|++++..|++.|+ +|++++|+.++.
T Consensus       141 ~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka  178 (297)
T 2egg_A          141 GKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKA  178 (297)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHH
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHH
Confidence            688999997 7899999999999998 999999987654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.88  E-value=2.4e-05  Score=54.78  Aligned_cols=37  Identities=16%  Similarity=0.230  Sum_probs=33.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ ||+|++++..|++.|++|++++|+.++.
T Consensus       119 ~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a  155 (272)
T 1p77_A          119 NQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKT  155 (272)
T ss_dssp             TCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            689999997 7999999999999999999999997654

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.86  E-value=3e-06  Score=63.88  Aligned_cols=37  Identities=27%  Similarity=0.298  Sum_probs=33.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ||+++|||++ +||+++++.|+..|++|+++++++...
T Consensus       265 GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a  301 (488)
T 3ond_A          265 GKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICA  301 (488)
T ss_dssp             TCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            7999999987 999999999999999999999986543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.81  E-value=5.8e-05  Score=54.85  Aligned_cols=37  Identities=22%  Similarity=0.258  Sum_probs=33.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ |++|+.+++.+...|++|++++|+.+..
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~  203 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL  203 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            468999998 9999999999999999999999987654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.81  E-value=0.00013  Score=52.95  Aligned_cols=37  Identities=22%  Similarity=0.250  Sum_probs=32.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|++|++++++++..
T Consensus       188 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~  224 (366)
T 1yqd_A          188 GKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKK  224 (366)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            678999995 8999999998888899999999887644

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.80  E-value=9.7e-05  Score=54.03  Aligned_cols=37  Identities=22%  Similarity=0.192  Sum_probs=33.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ |++|+.+++.+...|++|++++++.+..
T Consensus       168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l  204 (377)
T 2vhw_A          168 PADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKL  204 (377)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            689999997 9999999999999999999999987654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.78  E-value=0.00013  Score=52.88  Aligned_cols=33  Identities=24%  Similarity=0.400  Sum_probs=29.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r   34 (125)
                      |++++|+|+++++|...++.+...|++|+++++
T Consensus       184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~  216 (375)
T 2vn8_A          184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS  216 (375)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC
Confidence            679999999999999999888888999998874

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.77  E-value=4.7e-05  Score=49.82  Aligned_cols=37  Identities=24%  Similarity=0.391  Sum_probs=31.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~   39 (125)
                      ++.++|.| .|.+|..+++.|.+. |++|++++++++..
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~   76 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAA   76 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHH
Confidence            45678888 589999999999999 99999999987644

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.74  E-value=0.00011  Score=52.73  Aligned_cols=37  Identities=19%  Similarity=0.443  Sum_probs=32.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+...|++|+++ ++++..
T Consensus       151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~  187 (343)
T 3gaz_A          151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL  187 (343)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH
Confidence            6899999999999999999888899999998 665433

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.74  E-value=9.6e-05  Score=49.71  Aligned_cols=35  Identities=11%  Similarity=0.235  Sum_probs=30.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .++|.|+ |.+|..+++.|.+.|+.|++++++++..
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~   36 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELC   36 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            4788895 8899999999999999999999987654

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.69  E-value=0.00047  Score=47.59  Aligned_cols=34  Identities=21%  Similarity=0.311  Sum_probs=29.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      +++++|.|+ ||+|..+++.|++.|. ++.+++++.
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            367889985 7999999999999997 899999875

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.63  E-value=0.0001  Score=52.51  Aligned_cols=36  Identities=31%  Similarity=0.406  Sum_probs=32.2

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++|+|+++++|...++.+...|++|+++++++++.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~  187 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH  187 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            799999999999999988888899999999986654

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.62  E-value=0.00048  Score=49.66  Aligned_cols=37  Identities=16%  Similarity=0.167  Sum_probs=31.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      |++++|+|+ |++|...++.....|++ |+++++++++.
T Consensus       180 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  217 (363)
T 3m6i_A          180 GDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRL  217 (363)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            678999998 99999988877778997 88898887654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.61  E-value=0.0004  Score=49.66  Aligned_cols=37  Identities=19%  Similarity=0.326  Sum_probs=32.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|++|+++++++++.
T Consensus       167 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~  203 (340)
T 3s2e_A          167 GQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKL  203 (340)
T ss_dssp             TSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            678999996 8999999888888899999999987655

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.60  E-value=0.00029  Score=50.91  Aligned_cols=37  Identities=27%  Similarity=0.321  Sum_probs=32.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+| ++++|...+..+...|++|+++++++++.
T Consensus       190 g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~  226 (363)
T 3uog_A          190 GDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKL  226 (363)
T ss_dssp             TCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhH
Confidence            67999999 88999999988888899999999887654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.59  E-value=0.00024  Score=51.00  Aligned_cols=37  Identities=24%  Similarity=0.179  Sum_probs=32.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|+ +|++++++++..
T Consensus       168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~  205 (348)
T 2d8a_A          168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR  205 (348)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            678999999 9999999998888899 999999986644

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.58  E-value=0.00023  Score=49.88  Aligned_cols=37  Identities=16%  Similarity=0.206  Sum_probs=33.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +|+++|+|+ ||.|++++..|++.|+ +|.+++|+.++.
T Consensus       120 ~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a  157 (272)
T 3pwz_A          120 NRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKA  157 (272)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            689999997 6999999999999996 999999987654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.57  E-value=0.00039  Score=49.81  Aligned_cols=37  Identities=22%  Similarity=0.258  Sum_probs=32.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|+ +|++++++++..
T Consensus       165 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~  202 (343)
T 2dq4_A          165 GKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRL  202 (343)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            678999999 9999999988888899 999999986644

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.56  E-value=4.4e-05  Score=48.18  Aligned_cols=37  Identities=14%  Similarity=0.140  Sum_probs=32.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|.|+ |++|+.+++.|.+.|++|++++|+.+..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~   57 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHV   57 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHH
Confidence            678999995 9999999999999999999999987654

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.56  E-value=0.00044  Score=50.12  Aligned_cols=37  Identities=16%  Similarity=0.247  Sum_probs=31.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|+ +|+++++++++.
T Consensus       193 g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~  230 (374)
T 1cdo_A          193 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF  230 (374)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence            678999995 8999999888778899 799999887655

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.53  E-value=0.00061  Score=49.15  Aligned_cols=37  Identities=19%  Similarity=0.361  Sum_probs=31.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...+..+... |++|+++++++++.
T Consensus       187 g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~  224 (359)
T 1h2b_A          187 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL  224 (359)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            678999999 79999988877778 99999999887644

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.53  E-value=0.00052  Score=49.32  Aligned_cols=37  Identities=30%  Similarity=0.311  Sum_probs=31.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|++|++++++++..
T Consensus       169 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~  205 (352)
T 1e3j_A          169 GTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL  205 (352)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence            678999996 8999999888778899999999887654

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.47  E-value=0.00094  Score=47.88  Aligned_cols=35  Identities=14%  Similarity=0.167  Sum_probs=31.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~   37 (125)
                      ++++||||+|.+|..++..|+.+|  .+|+++++++.
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~   45 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA   45 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence            578999999999999999999988  68999987654

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.47  E-value=7.5e-05  Score=52.55  Aligned_cols=37  Identities=19%  Similarity=0.158  Sum_probs=33.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a  154 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRF  154 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGG
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHH
Confidence            578999996 7999999999999998 899999987644

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.45  E-value=0.00061  Score=49.33  Aligned_cols=37  Identities=22%  Similarity=0.388  Sum_probs=31.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++++|+| ++++|...++.+...|+ +|+++++++++.
T Consensus       192 g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~  229 (374)
T 2jhf_A          192 GSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKF  229 (374)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            67899999 48999999888878899 799999887655

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.45  E-value=0.0017  Score=46.73  Aligned_cols=37  Identities=30%  Similarity=0.287  Sum_probs=31.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...++.+...|+ +|++++++++..
T Consensus       172 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  209 (356)
T 1pl8_A          172 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL  209 (356)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            678999996 8999998887777899 899999887644

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.45  E-value=0.00063  Score=49.38  Aligned_cols=37  Identities=24%  Similarity=0.343  Sum_probs=31.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...++.+...|++|++++++++..
T Consensus       195 g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~  231 (369)
T 1uuf_A          195 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR  231 (369)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            678999997 7899998887777899999999887655

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.44  E-value=0.00028  Score=50.95  Aligned_cols=37  Identities=22%  Similarity=0.196  Sum_probs=32.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|++|++++++++..
T Consensus       180 g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~  216 (360)
T 1piw_A          180 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR  216 (360)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            679999999 9999999888778899999999987654

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.43  E-value=0.00078  Score=48.81  Aligned_cols=37  Identities=16%  Similarity=0.218  Sum_probs=31.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...++.+...|+ +|+++++++++.
T Consensus       196 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  233 (376)
T 1e3i_A          196 GSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF  233 (376)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            678999995 8999998887777899 899999887654

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.42  E-value=0.0016  Score=47.37  Aligned_cols=37  Identities=22%  Similarity=0.266  Sum_probs=32.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~   39 (125)
                      |++++|+| ++++|...++.+...| ++|++++++++..
T Consensus       196 g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  233 (380)
T 1vj0_A          196 GKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRL  233 (380)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHH
Confidence            67899999 8999999988877889 5999999987654

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.42  E-value=0.0006  Score=49.32  Aligned_cols=37  Identities=22%  Similarity=0.420  Sum_probs=31.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...++.+...|+ +|+++++++++.
T Consensus       191 g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~  228 (373)
T 2fzw_A          191 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF  228 (373)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            678999995 8999998887777899 799999887655

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.41  E-value=0.0025  Score=45.12  Aligned_cols=105  Identities=15%  Similarity=0.240  Sum_probs=64.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ..+++|.| .||+|..+++.|++.|. ++.+++.+.-...   .+.+..   .   .....+..+.....+.+...++..
T Consensus        36 ~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~s---NL~Rq~---~---~~~diG~~Ka~aa~~~L~~iNP~v  105 (292)
T 3h8v_A           36 TFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELA---NMNRLF---F---QPHQAGLSKVQAAEHTLRNINPDV  105 (292)
T ss_dssp             GCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC---------------------CCTTSBHHHHHHHHHHHHCTTS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChh---hccccc---C---ChhhcCchHHHHHHHHHHhhCCCc
Confidence            35788888 67999999999999996 8888888642110   011111   0   111233344455556666666666


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhh----cCCccEEEeCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNK----FGHIDVMINNA  116 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~----~g~id~lv~na  116 (125)
                      ++..+..++++.+.+..+++.+...    ....|++|.+.
T Consensus       106 ~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          106 LFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             EEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             EEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            7888888888767766666544221    13678888654

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.37  E-value=0.00066  Score=49.13  Aligned_cols=38  Identities=24%  Similarity=0.371  Sum_probs=31.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH-cCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA-KGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.+.. .|++|+++++++++.
T Consensus       172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~  210 (363)
T 4dvj_A          172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ  210 (363)
T ss_dssp             EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence            56899999999999987765554 589999999987654

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.36  E-value=0.00032  Score=47.59  Aligned_cols=36  Identities=17%  Similarity=0.079  Sum_probs=30.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .+.++|.|+ +.+|+.+++.|.+.|+ |++++++++..
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~   44 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK   44 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHH
Confidence            457899996 7999999999999999 99999887643

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.36  E-value=0.00015  Score=51.98  Aligned_cols=33  Identities=21%  Similarity=0.102  Sum_probs=29.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-------eEEEeecC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-------QVIGFARR   35 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-------~v~~~~r~   35 (125)
                      ++++|||++|++|..++..|+.+|.       .|.+++++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~   45 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP   45 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence            4789999999999999999999885       79999887

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.34  E-value=0.00062  Score=49.41  Aligned_cols=37  Identities=16%  Similarity=0.311  Sum_probs=31.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...+..+...|+ +|+++++++++.
T Consensus       194 g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~  231 (378)
T 3uko_A          194 GSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKY  231 (378)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            678999997 8999998888778899 899999887755

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.33  E-value=0.0006  Score=49.47  Aligned_cols=37  Identities=22%  Similarity=0.209  Sum_probs=31.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ |++|...+..+...|+ +|++++++++..
T Consensus       183 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  220 (370)
T 4ej6_A          183 GSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKR  220 (370)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            678999997 8999998887778899 888888887654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.32  E-value=0.0017  Score=47.01  Aligned_cols=35  Identities=17%  Similarity=0.231  Sum_probs=30.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |++++|+|+++++|...+..+...|++|+++. +++
T Consensus       165 g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~  199 (371)
T 3gqv_A          165 PVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPH  199 (371)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGG
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHH
Confidence            57899999999999998888888899999886 444

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.32  E-value=0.00082  Score=47.08  Aligned_cols=37  Identities=24%  Similarity=0.267  Sum_probs=33.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|.|+ ||.|++++..|++.|.+|.+++|+.++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka  154 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGL  154 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            578999995 8999999999999999999999998765

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.32  E-value=0.00059  Score=48.86  Aligned_cols=37  Identities=19%  Similarity=0.403  Sum_probs=32.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc--CCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK--GHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...  |++|+++++++++.
T Consensus       171 g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~  209 (344)
T 2h6e_A          171 EPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHR  209 (344)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHH
Confidence            678999999 89999988887788  99999999887654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.31  E-value=0.001  Score=48.35  Aligned_cols=38  Identities=16%  Similarity=0.289  Sum_probs=32.1

Q ss_pred             CcEEEEec-CCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTG-ASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG-~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.| +++++|...+..+...|++|+++++++++.
T Consensus       171 g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~  209 (379)
T 3iup_A          171 GHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA  209 (379)
T ss_dssp             TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            56788986 899999998888778899999999887654

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.30  E-value=0.0011  Score=48.01  Aligned_cols=37  Identities=22%  Similarity=0.378  Sum_probs=31.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...+..+...|+ +|+++++++++.
T Consensus       192 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  229 (373)
T 1p0f_A          192 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF  229 (373)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH
Confidence            678999995 8999998887777898 799999887655

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.29  E-value=0.001  Score=47.94  Aligned_cols=37  Identities=19%  Similarity=0.160  Sum_probs=31.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...++.+...|++|+++++++++.
T Consensus       181 g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~  217 (357)
T 2cf5_A          181 GLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKR  217 (357)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHH
Confidence            678999995 8999999887777899999999887644

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.27  E-value=0.00097  Score=49.11  Aligned_cols=37  Identities=27%  Similarity=0.415  Sum_probs=33.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++++|.|+ |++|..+++.|...|+ +|++++|+.+..
T Consensus       167 g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra  204 (404)
T 1gpj_A          167 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERA  204 (404)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHH
T ss_pred             CCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHH
Confidence            689999997 9999999999999998 999999987643

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.21  E-value=0.0018  Score=47.41  Aligned_cols=37  Identities=24%  Similarity=0.207  Sum_probs=31.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ |++|...+..+...|+ +|+++++++++.
T Consensus       214 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  251 (404)
T 3ip1_A          214 GDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRR  251 (404)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            678999998 8999998887778899 899998887654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.19  E-value=0.00078  Score=48.31  Aligned_cols=37  Identities=27%  Similarity=0.345  Sum_probs=32.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...+..+...|++|+++++++++.
T Consensus       177 g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~  213 (348)
T 3two_A          177 GTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKK  213 (348)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            678999997 8999998888878899999999887755

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.10  E-value=0.0056  Score=42.23  Aligned_cols=33  Identities=18%  Similarity=0.275  Sum_probs=27.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      +++++|.|+ ||+|..+++.|++.|. ++.+++++
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            467889985 7899999999999997 77887765

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.05  E-value=0.0016  Score=48.21  Aligned_cols=36  Identities=17%  Similarity=0.283  Sum_probs=31.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.++|.|. |.+|..+++.|.+.|+.|++++++++..
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v   40 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHI   40 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence            46888885 7799999999999999999999997754

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.05  E-value=0.0012  Score=46.42  Aligned_cols=37  Identities=19%  Similarity=0.247  Sum_probs=33.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +++++|+|+ ||+|++++..|++.|+ +|.+++|+.+..
T Consensus       126 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a  163 (281)
T 3o8q_A          126 GATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKA  163 (281)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHH
Confidence            689999997 6999999999999996 999999997655

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.05  E-value=0.0027  Score=45.86  Aligned_cols=37  Identities=22%  Similarity=0.213  Sum_probs=30.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...++.+...|+ .|+++++++++.
T Consensus       191 g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~  228 (371)
T 1f8f_A          191 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL  228 (371)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH
Confidence            678999995 8999998887777898 699999887654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.05  E-value=0.0015  Score=46.37  Aligned_cols=34  Identities=21%  Similarity=0.431  Sum_probs=30.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      |.+++|+|+++++|...+..+...|++|+++.++
T Consensus       153 g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          153 GDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            6799999999999999999888889999988754

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.04  E-value=0.0024  Score=45.98  Aligned_cols=37  Identities=11%  Similarity=0.109  Sum_probs=31.5

Q ss_pred             C-cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 S-KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~-~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      | .+++|+|+++++|...++.+...|++++++.++...
T Consensus       167 g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          167 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            5 799999999999999888777789999998876543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.99  E-value=0.0049  Score=43.40  Aligned_cols=37  Identities=24%  Similarity=0.228  Sum_probs=32.5

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |++++.|.||.|-+|.++++.|.+.|++|++++|++.
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            3456788898999999999999999999999998765

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.95  E-value=0.0041  Score=45.79  Aligned_cols=37  Identities=30%  Similarity=0.323  Sum_probs=32.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ |.+|+..++.+...|++|++++++....
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~  208 (401)
T 1x13_A          172 PAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVK  208 (401)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            578999995 8899999999999999999999987654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.94  E-value=0.0021  Score=46.22  Aligned_cols=34  Identities=21%  Similarity=0.228  Sum_probs=29.1

Q ss_pred             cEEEEecCCcchHHHH-HHHH-HHcCCe-EEEeecCch
Q psy7029           3 KIIVVTGASVGIGAAI-LRAL-AAKGHQ-VIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~~-a~~l-~~~g~~-v~~~~r~~~   37 (125)
                      ++++|+|+ +++|... +..+ ...|++ |++++++++
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~  210 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDR  210 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcc
Confidence            89999999 9999998 7766 567997 999999876

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.94  E-value=0.0013  Score=45.57  Aligned_cols=35  Identities=31%  Similarity=0.353  Sum_probs=30.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +++|.|+ ||.|++++..|++.|+ +|++++|+.++.
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka  145 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERA  145 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHH
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            6788885 8999999999999998 999999987644

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.83  E-value=0.0028  Score=45.44  Aligned_cols=37  Identities=14%  Similarity=0.231  Sum_probs=30.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...+..+...|+ +|+++++++++.
T Consensus       167 g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~  204 (352)
T 3fpc_A          167 GDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCC  204 (352)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence            678999985 8999998887777898 899999876644

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.81  E-value=0.0054  Score=44.71  Aligned_cols=37  Identities=22%  Similarity=0.153  Sum_probs=30.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++++|.|+ +++|...++.+...|+ .|+++++++++.
T Consensus       186 g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~  223 (398)
T 1kol_A          186 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL  223 (398)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence            678999995 9999998887777898 688888877644

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.75  E-value=0.0057  Score=44.65  Aligned_cols=37  Identities=19%  Similarity=0.176  Sum_probs=31.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...++.+...|+ +|++++++++..
T Consensus       186 g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  223 (398)
T 2dph_A          186 GSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERL  223 (398)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence            678999996 9999998887777899 899999887644

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.73  E-value=0.0022  Score=42.62  Aligned_cols=36  Identities=25%  Similarity=0.409  Sum_probs=32.0

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.|+|++|.+|..+++.|++.|++|++++|+++..
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~   37 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA   37 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            467889999999999999999999999999987654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.72  E-value=0.015  Score=41.44  Aligned_cols=37  Identities=24%  Similarity=0.335  Sum_probs=30.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...+..+... |.+|+++++++++.
T Consensus       172 g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~  209 (345)
T 3jv7_A          172 GSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRL  209 (345)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence            678999997 89999987766666 78999999987655

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.71  E-value=0.0071  Score=43.36  Aligned_cols=36  Identities=22%  Similarity=0.203  Sum_probs=32.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |+.++|.|++.=+|+.+++.|+..|+.|.+++|+..
T Consensus       177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~  212 (320)
T 1edz_A          177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI  212 (320)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE
T ss_pred             CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchH
Confidence            689999998878899999999999999999999844

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.68  E-value=0.023  Score=41.04  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=28.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      +++++|.| .||+|..+++.|+..|. ++.+++++.
T Consensus        34 ~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           34 NTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            46788888 67999999999999997 788888754

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.62  E-value=0.072  Score=37.02  Aligned_cols=38  Identities=21%  Similarity=0.293  Sum_probs=31.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhH
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDF   41 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   41 (125)
                      +++.|.| .|.+|..++..|++.|++|++++++++....
T Consensus         5 ~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~   42 (283)
T 4e12_A            5 TNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDA   42 (283)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence            4666677 4779999999999999999999999876543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.62  E-value=0.025  Score=39.36  Aligned_cols=38  Identities=24%  Similarity=0.334  Sum_probs=33.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++++.|.|++|-+|..+++.|++.|++|++++|+++..
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~   48 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGR   48 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            35788899889999999999999999999999987644

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.61  E-value=0.0029  Score=45.11  Aligned_cols=35  Identities=14%  Similarity=0.060  Sum_probs=30.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.++|.|+ +.+|+.+++.|.++|. |++++++++..
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~  150 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK  150 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh
Confidence            47889995 8899999999999999 99999887644

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.60  E-value=0.0032  Score=44.69  Aligned_cols=37  Identities=30%  Similarity=0.487  Sum_probs=32.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      +++|+|+++++|...++.+...|++|+++++++++.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~  189 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD  189 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            7999999999999999888888999999999876543

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.56  E-value=0.0048  Score=44.38  Aligned_cols=36  Identities=22%  Similarity=0.432  Sum_probs=30.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |.+++|+|+++++|...+..+...|++++++.++.+
T Consensus       168 g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          168 GDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            679999999999999988877778999888876543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.56  E-value=0.012  Score=42.58  Aligned_cols=34  Identities=26%  Similarity=0.405  Sum_probs=28.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      +.+++|.|+ ||+|..+++.|+..|. ++.+++++.
T Consensus       118 ~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~  152 (353)
T 3h5n_A          118 NAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQ  152 (353)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            457888885 7999999999999997 888888763

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.51  E-value=0.0054  Score=43.36  Aligned_cols=37  Identities=35%  Similarity=0.434  Sum_probs=32.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      .++|+|+++++|...++.+...|++|+++++++++.+
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~  185 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHG  185 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            3999999999999998888888999999999877653

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.48  E-value=0.0044  Score=43.66  Aligned_cols=37  Identities=27%  Similarity=0.314  Sum_probs=33.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++.++|.|+ ||.|++++..|.+.|+ +|.+++|+.++.
T Consensus       122 ~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka  159 (282)
T 3fbt_A          122 NNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKT  159 (282)
T ss_dssp             TSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence            688999996 6999999999999998 899999987654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.48  E-value=0.025  Score=41.47  Aligned_cols=37  Identities=22%  Similarity=0.274  Sum_probs=32.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|.|+ |.+|...++.+...|++|++++++....
T Consensus       184 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l  220 (381)
T 3p2y_A          184 PASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVA  220 (381)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            468899996 7899999999999999999999997654

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.44  E-value=0.0056  Score=45.88  Aligned_cols=36  Identities=14%  Similarity=0.329  Sum_probs=30.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.++|.|+ |-+|+.+++.|.++|++|++++++++..
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~   39 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRL   39 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHH
Confidence            45778885 6899999999999999999999987654

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=96.43  E-value=0.0043  Score=44.11  Aligned_cols=31  Identities=26%  Similarity=0.340  Sum_probs=27.3

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC--eEEEeec
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH--QVIGFAR   34 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r   34 (125)
                      +++|||++|++|..++..|+.++.  .+.++++
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di   34 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGR   34 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence            588999999999999999998874  5788887

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.40  E-value=0.018  Score=41.79  Aligned_cols=35  Identities=14%  Similarity=0.256  Sum_probs=30.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +++++|.| ++.+|+.+++.+.+.|++|++++.++.
T Consensus        12 ~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~   46 (377)
T 3orq_A           12 GATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSED   46 (377)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            68899998 567999999999999999999987643

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.37  E-value=0.036  Score=38.20  Aligned_cols=32  Identities=25%  Similarity=0.266  Sum_probs=26.2

Q ss_pred             EEEEecCCcchHHHHHHHHHHc-CCeEEEeecC
Q psy7029           4 IIVVTGASVGIGAAILRALAAK-GHQVIGFARR   35 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~   35 (125)
                      .+.|.|++|.+|+.+++.+.+. ++.++.+...
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~   34 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA   34 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence            5788999999999999998865 8888765543

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.35  E-value=0.04  Score=42.78  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=28.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      +.+++|.| .||+|..+++.|+..|. ++.+++++.
T Consensus       326 ~arVLIVG-aGGLGs~vA~~La~aGVG~ItLvD~D~  360 (615)
T 4gsl_A          326 NTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGT  360 (615)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence            45788888 57999999999999997 888888864

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.33  E-value=0.048  Score=38.76  Aligned_cols=33  Identities=24%  Similarity=0.270  Sum_probs=29.6

Q ss_pred             EEEEecCCcchHHHHHHHHHHcC--CeEEEeecCc
Q psy7029           4 IIVVTGASVGIGAAILRALAAKG--HQVIGFARRA   36 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~   36 (125)
                      ++.|+|++|.+|..++..|+..|  .+|+++++++
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~   36 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH   36 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence            57889999999999999999888  6899999976

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.29  E-value=0.012  Score=42.94  Aligned_cols=37  Identities=19%  Similarity=0.151  Sum_probs=32.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+ |++|+..++.+...|++|+++++++...
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~  208 (384)
T 1l7d_A          172 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK  208 (384)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            678999995 8999999999999999999999987644

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.16  E-value=0.03  Score=43.36  Aligned_cols=33  Identities=21%  Similarity=0.284  Sum_probs=28.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      +.+++|.| .||+|..+++.|+..|. ++.+++.+
T Consensus       327 ~~kVLIVG-aGGLGs~va~~La~aGVG~ItLvD~D  360 (598)
T 3vh1_A          327 NTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNG  360 (598)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            35788888 67999999999999997 78888765

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.04  E-value=0.015  Score=46.38  Aligned_cols=35  Identities=23%  Similarity=0.330  Sum_probs=30.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      |.++||.|++||+|...+......|++|+++.++.
T Consensus       346 G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~  380 (795)
T 3slk_A          346 GESLLVHSAAGGVGMAAIQLARHLGAEVYATASED  380 (795)
T ss_dssp             TCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH
Confidence            67899999999999998887777899999988654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.04  E-value=0.056  Score=37.83  Aligned_cols=35  Identities=17%  Similarity=0.161  Sum_probs=30.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++-|.| .|-+|..+++.|++.|++|++++|+++..
T Consensus        17 ~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~   51 (296)
T 3qha_A           17 KLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAM   51 (296)
T ss_dssp             CEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred             eEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            456666 67899999999999999999999998754

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.02  E-value=0.045  Score=38.02  Aligned_cols=38  Identities=18%  Similarity=0.197  Sum_probs=31.0

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      |.++. |.| .|-+|..+++.|++.|++|++++|+++...
T Consensus         1 M~~I~-iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~   38 (287)
T 3pdu_A            1 MTTYG-FLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCA   38 (287)
T ss_dssp             CCCEE-EEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGH
T ss_pred             CCeEE-EEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHH
Confidence            54444 455 788999999999999999999999987553

>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...

Probab=95.99  E-value=0.048  Score=40.24  Aligned_cols=35  Identities=29%  Similarity=0.306  Sum_probs=30.0

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      |+|+++|+|+ +.++..+++.+.+.|+++++++.+.
T Consensus         1 m~k~ilI~g~-g~~~~~~~~a~~~~G~~vv~v~~~~   35 (449)
T 2w70_A            1 MLDKIVIANR-GEIALRILRACKELGIKTVAVHSSA   35 (449)
T ss_dssp             CCSEEEECCC-HHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred             CCceEEEeCC-cHHHHHHHHHHHHcCCeEEEEeccc
Confidence            7789999996 4789999999999999999887543

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.98  E-value=0.061  Score=38.99  Aligned_cols=34  Identities=18%  Similarity=0.241  Sum_probs=29.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ||+++|.|++ .+|+.+++.+.+.|++|++++.+.
T Consensus        14 ~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~   47 (389)
T 3q2o_A           14 GKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTK   47 (389)
T ss_dssp             TSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCC
Confidence            6899999855 589999999999999999998764

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=95.89  E-value=0.052  Score=39.13  Aligned_cols=34  Identities=21%  Similarity=0.210  Sum_probs=28.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |+++|+|+ +.+|+.+++.+.+.|+++++++.++.
T Consensus         2 ~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~   35 (380)
T 3ax6_A            2 KKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPR   35 (380)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            78899986 46899999999999999999887543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.85  E-value=0.067  Score=39.54  Aligned_cols=37  Identities=22%  Similarity=0.127  Sum_probs=32.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.+++|.|+ |.+|...++.+...|++|++++++....
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l  226 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAK  226 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            457899996 7899999999999999999999987654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.83  E-value=0.07  Score=37.59  Aligned_cols=37  Identities=22%  Similarity=0.186  Sum_probs=30.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      +++-|.| .|-+|..+++.|++.|++|++++|+++...
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~   58 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCD   58 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            4455566 678999999999999999999999987553

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.75  E-value=0.072  Score=36.53  Aligned_cols=35  Identities=17%  Similarity=0.200  Sum_probs=28.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +..+|..||+.|   ..+..|++.|++|+.++.++...
T Consensus        69 ~~~vLD~GCG~G---~~~~~La~~G~~V~gvD~S~~~i  103 (252)
T 2gb4_A           69 GLRVFFPLCGKA---IEMKWFADRGHTVVGVEISEIGI  103 (252)
T ss_dssp             SCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCeEEEeCCCCc---HHHHHHHHCCCeEEEEECCHHHH
Confidence            457899999887   34677888999999999998755

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.66  E-value=0.078  Score=41.40  Aligned_cols=33  Identities=27%  Similarity=0.423  Sum_probs=28.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ..++|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus        18 s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~   51 (640)
T 1y8q_B           18 GRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDT   51 (640)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred             CeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCE
Confidence            46888885 8999999999999997 888888753

>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}

Probab=95.61  E-value=0.18  Score=30.52  Aligned_cols=37  Identities=27%  Similarity=0.362  Sum_probs=30.4

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |.+..++.....-|=..++++.-++|.+|+++..+..
T Consensus         1 msqifvvfssdpeilkeivreikrqgvrvvllysdqd   37 (162)
T 2l82_A            1 MSQIFVVFSSDPEILKEIVREIKRQGVRVVLLYSDQD   37 (162)
T ss_dssp             CCEEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred             CceEEEEecCCHHHHHHHHHHHHhCCeEEEEEecCch
Confidence            5566777777778889999999999999999887654

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.61  E-value=0.023  Score=40.01  Aligned_cols=36  Identities=11%  Similarity=0.101  Sum_probs=31.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...+..+...|++|++++ ++++.
T Consensus       143 g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~  178 (315)
T 3goh_A          143 QREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQ  178 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhH
Confidence            689999999 9999998887777899999999 66544

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.51  E-value=0.065  Score=39.52  Aligned_cols=35  Identities=14%  Similarity=0.128  Sum_probs=29.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +++++|.|+ +-+|+.+++.+.+.|++|++++.++.
T Consensus        35 ~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~   69 (419)
T 4e4t_A           35 GAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPA   69 (419)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCc
Confidence            788999985 46899999999999999999986543

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.50  E-value=0.086  Score=36.92  Aligned_cols=36  Identities=14%  Similarity=0.126  Sum_probs=30.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++.|.| .|-+|..+++.|++.|++|++++|+++..
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   43 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQAC   43 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            3455666 68899999999999999999999987654

>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*

Probab=95.50  E-value=0.11  Score=33.77  Aligned_cols=36  Identities=25%  Similarity=0.339  Sum_probs=30.7

Q ss_pred             cEEEEecCCcchHHH-----HHHHHHHcCCeEEEeecCchh
Q psy7029           3 KIIVVTGASVGIGAA-----ILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         3 ~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |++.|+++.+|.|+.     ++..|+++|.+|.+++-+++.
T Consensus         2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~   42 (206)
T 4dzz_A            2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQM   42 (206)
T ss_dssp             EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence            889999988888876     678888999999999988653

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.48  E-value=0.057  Score=38.57  Aligned_cols=33  Identities=24%  Similarity=0.342  Sum_probs=26.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeec
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFAR   34 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r   34 (125)
                      |++++|+|+++++|...+...... +..|+.+.+
T Consensus       143 g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~  176 (349)
T 4a27_A          143 GMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS  176 (349)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC
Confidence            689999999999999977765555 467887763

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.47  E-value=0.018  Score=40.03  Aligned_cols=37  Identities=35%  Similarity=0.458  Sum_probs=32.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|.|+ |++|+++++.|.+.|++|.+++|+.+..
T Consensus       129 ~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~  165 (275)
T 2hk9_A          129 EKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKA  165 (275)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHH
Confidence            578899995 7999999999999999999999987644

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.46  E-value=0.023  Score=40.00  Aligned_cols=37  Identities=30%  Similarity=0.294  Sum_probs=32.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++++.|.|+ |.+|+.+++.|...|++|++++|+.+..
T Consensus       157 g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~  193 (300)
T 2rir_A          157 GSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL  193 (300)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            688999995 8899999999999999999999987543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.42  E-value=0.079  Score=39.38  Aligned_cols=34  Identities=29%  Similarity=0.277  Sum_probs=30.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      +|.++|.|. ++.|.++|+.|.++|++|.+.++..
T Consensus         9 ~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            9 NKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             TCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            688999997 7889999999999999999999865

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.40  E-value=0.019  Score=38.38  Aligned_cols=36  Identities=17%  Similarity=0.218  Sum_probs=31.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++.|.| .|.+|..+++.|++.|++|++++|+.+..
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~   64 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRT   64 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            4577788 78999999999999999999999987643

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.38  E-value=0.15  Score=36.09  Aligned_cols=36  Identities=19%  Similarity=0.304  Sum_probs=30.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++.|.| .|.+|..+++.|++.|++|++++|+++..
T Consensus        32 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~   67 (320)
T 4dll_A           32 RKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARA   67 (320)
T ss_dssp             SEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence            3555666 68899999999999999999999997754

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.31  E-value=0.03  Score=39.51  Aligned_cols=38  Identities=24%  Similarity=0.227  Sum_probs=33.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ||.++|.|.++-+|+.++..|++.|+.|.++.+....+
T Consensus       160 Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L  197 (285)
T 3p2o_A          160 GKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDL  197 (285)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            78999999999899999999999999999998765433

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=95.29  E-value=0.15  Score=36.49  Aligned_cols=35  Identities=17%  Similarity=0.152  Sum_probs=29.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||+++|.| ++..|..+++.+.+.|+++++++.++.
T Consensus         1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~~~~   35 (363)
T 4ffl_A            1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDKNPQ   35 (363)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            38999999 457899999988889999999987654

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=95.28  E-value=0.13  Score=37.05  Aligned_cols=35  Identities=20%  Similarity=0.322  Sum_probs=29.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      .++++|+|+ +.+|+.+++.+.+.|+++++++..+.
T Consensus        11 ~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~   45 (391)
T 1kjq_A           11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD   45 (391)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCC
Confidence            478899986 46899999999999999999887643

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=95.27  E-value=0.037  Score=49.26  Aligned_cols=38  Identities=21%  Similarity=0.324  Sum_probs=32.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.++||.|++||+|...+......|++|+++.++.++.
T Consensus      1668 Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~ 1705 (2512)
T 2vz8_A         1668 GESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKR 1705 (2512)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhh
Confidence            67999999999999998887777899999998876544

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.27  E-value=0.027  Score=39.47  Aligned_cols=36  Identities=28%  Similarity=0.352  Sum_probs=32.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |+++.|.| .|.+|+.+++.|...|++|++++|+.+.
T Consensus       155 g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~  190 (293)
T 3d4o_A          155 GANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDL  190 (293)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            68999999 5899999999999999999999998754

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.25  E-value=0.21  Score=34.57  Aligned_cols=37  Identities=22%  Similarity=0.262  Sum_probs=31.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      +++.|.| .|.+|..+++.|++.|++|++++|+++...
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~   38 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAE   38 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHH
Confidence            3556667 588999999999999999999999987553

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.24  E-value=0.21  Score=34.66  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=30.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC---eEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH---QVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~   39 (125)
                      +++.|.|+ |-+|.++++.|++.|+   +|++++|+++..
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~   42 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKL   42 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHH
Confidence            45666775 7899999999999998   899999998754

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=95.20  E-value=0.041  Score=39.72  Aligned_cols=38  Identities=16%  Similarity=0.151  Sum_probs=32.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      ++++.|+|++|.+|..++..++..|.  +|++++.+....
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~   47 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGL   47 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhH
Confidence            56788999999999999999999884  899999976543

>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*

Probab=95.14  E-value=0.026  Score=38.21  Aligned_cols=36  Identities=36%  Similarity=0.526  Sum_probs=31.2

Q ss_pred             CCcEEEEecCCcchHHH-----HHHHHHHcCCeEEEeecCc
Q psy7029           1 MSKIIVVTGASVGIGAA-----ILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r~~   36 (125)
                      |+|++.|+++.+|.|+.     ++..|+++|.+|.+++-+.
T Consensus         1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~   41 (260)
T 3q9l_A            1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI   41 (260)
T ss_dssp             -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence            78999999999998876     6788899999999999886

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=95.12  E-value=0.22  Score=36.50  Aligned_cols=35  Identities=23%  Similarity=0.335  Sum_probs=29.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      .++++|+|+ +.+|+.+++.+.+.|++|++++..+.
T Consensus        19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~   53 (433)
T 2dwc_A           19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYAN   53 (433)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC
Confidence            468899986 46899999999999999999987643

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=95.09  E-value=0.11  Score=38.72  Aligned_cols=32  Identities=28%  Similarity=0.456  Sum_probs=27.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      .+++|.| .||+|..+++.|+..|. ++.+++.+
T Consensus        41 ~~VlvvG-~GGlGs~va~~La~aGvg~i~ivD~D   73 (434)
T 1tt5_B           41 CKVLVIG-AGGLGCELLKNLALSGFRQIHVIDMD   73 (434)
T ss_dssp             CCEEEEC-SSTHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            5678888 58999999999999997 78888764

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=95.05  E-value=0.23  Score=35.59  Aligned_cols=35  Identities=20%  Similarity=0.243  Sum_probs=24.8

Q ss_pred             CCcEEEEecC-Ccch---HHHHHHHHHHcCCeEEEeecC
Q psy7029           1 MSKIIVVTGA-SVGI---GAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         1 ~~~~~lItG~-~~gi---G~~~a~~l~~~g~~v~~~~r~   35 (125)
                      |.+.++|+|| |+|-   +.+++++|.++|++|..++..
T Consensus         1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~   39 (365)
T 3s2u_A            1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTP   39 (365)
T ss_dssp             --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence            6666677655 5442   678999999999999877643

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.02  E-value=0.11  Score=36.84  Aligned_cols=37  Identities=22%  Similarity=0.329  Sum_probs=28.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeE-EEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQV-IGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v-~~~~r~~~~~   39 (125)
                      |++++|+|+ +++|...+..+...|+.+ +++++++++.
T Consensus       161 g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~  198 (346)
T 4a2c_A          161 NKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKL  198 (346)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             CCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHH
Confidence            678999986 889999888777889865 5677776544

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.01  E-value=0.034  Score=38.72  Aligned_cols=36  Identities=22%  Similarity=0.261  Sum_probs=30.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++.|.|+ |.+|..++..|++.|++|++++|+++..
T Consensus         4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~   39 (316)
T 2ew2_A            4 MKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHI   39 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence            46777884 8899999999999999999999987644

>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*

Probab=94.99  E-value=0.15  Score=37.65  Aligned_cols=35  Identities=23%  Similarity=0.252  Sum_probs=29.4

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      |.|++||+|+ +.++..+++.+.+.|+++++++...
T Consensus         5 ~~~kiLI~g~-g~~a~~i~~aa~~~G~~~v~v~~~~   39 (446)
T 3ouz_A            5 EIKSILIANR-GEIALRALRTIKEMGKKAICVYSEA   39 (446)
T ss_dssp             CCCEEEECCC-HHHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred             ccceEEEECC-CHHHHHHHHHHHHcCCEEEEEEcCc
Confidence            4689999984 4599999999999999999987543

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=94.96  E-value=0.051  Score=37.91  Aligned_cols=37  Identities=24%  Similarity=0.405  Sum_probs=32.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++.++|.| +||.+++++..|++.|+ +|.+++|+.++.
T Consensus       119 ~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt~~ka  156 (271)
T 1npy_A          119 NAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTG  156 (271)
T ss_dssp             TSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHH
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHH
Confidence            46788998 68999999999999997 899999997654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.94  E-value=0.53  Score=32.03  Aligned_cols=35  Identities=31%  Similarity=0.431  Sum_probs=29.4

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCe-EEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~   39 (125)
                      ++.|.|+ |.+|..+++.|++.|++ |.+++|+++..
T Consensus        12 ~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~   47 (266)
T 3d1l_A           12 PIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESA   47 (266)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHH
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHH
Confidence            5667785 88999999999999998 88899987654

>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}

Probab=94.94  E-value=0.09  Score=35.88  Aligned_cols=35  Identities=11%  Similarity=0.125  Sum_probs=29.0

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      |+..++|.|+ |.-|...|..|++.|++|+++.+..
T Consensus         1 m~~~vvIIG~-G~aGl~aA~~l~~~g~~v~lie~~~   35 (297)
T 3fbs_A            1 MKFDVIIIGG-SYAGLSAALQLGRARKNILLVDAGE   35 (297)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCCCEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            6667888885 4568899999999999999999754

>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2

Probab=94.94  E-value=0.069  Score=39.41  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=29.9

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      |.|+++|+|+ +.++..+++.+.+.|+++++++.+.
T Consensus         1 m~k~ilI~g~-g~~~~~~~~a~~~~G~~vv~v~~~~   35 (451)
T 1ulz_A            1 MVNKVLVANR-GEIAVRIIRACKELGIPTVAIYNEV   35 (451)
T ss_dssp             CCSSEEECCC-HHHHHHHHHHHHHHTCCEEEEECGG
T ss_pred             CCceEEEECC-cHHHHHHHHHHHHcCCeEEEEechh
Confidence            6788999995 5689999999999999999987643

>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*

Probab=94.93  E-value=0.036  Score=37.01  Aligned_cols=37  Identities=24%  Similarity=0.439  Sum_probs=31.7

Q ss_pred             CCcEEEEecCCcchHHH-----HHHHHHHcCCeEEEeecCch
Q psy7029           1 MSKIIVVTGASVGIGAA-----ILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |+|++.|+++.+|.|+.     ++..|+++|.+|.+++-+.+
T Consensus         1 M~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~~   42 (237)
T 1g3q_A            1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLT   42 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence            78999999998888765     77888899999999998764

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=94.91  E-value=0.18  Score=36.08  Aligned_cols=37  Identities=19%  Similarity=0.217  Sum_probs=31.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      .+++.|+|+ |.+|.+++..|+..|.  ++++++++++..
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~   43 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKA   43 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHH
Confidence            357888995 9999999999999986  899999976644

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=94.88  E-value=0.28  Score=34.75  Aligned_cols=37  Identities=22%  Similarity=0.328  Sum_probs=28.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ +++|...+..+... |++|+++++++++.
T Consensus       164 g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~  201 (348)
T 4eez_A          164 GDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKL  201 (348)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHH
T ss_pred             CCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHh
Confidence            678999986 67777767666655 78999999987654

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=94.84  E-value=0.068  Score=37.48  Aligned_cols=38  Identities=13%  Similarity=0.148  Sum_probs=33.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+.++|.|.++-+|+.+++.|++.|+.|.++.+.....
T Consensus       150 Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L  187 (276)
T 3ngx_A          150 ENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDI  187 (276)
T ss_dssp             SCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             CCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccH
Confidence            78999999998899999999999999999998765433

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=94.73  E-value=0.6  Score=31.93  Aligned_cols=35  Identities=34%  Similarity=0.455  Sum_probs=29.9

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.|.| .|.+|.++++.|.+.|++|++++|+++..
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~   36 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTC   36 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            456777 68899999999999999999999987654

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=94.73  E-value=0.43  Score=36.07  Aligned_cols=39  Identities=23%  Similarity=0.349  Sum_probs=32.3

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      |.+++-|.| .|-+|..++..|++.|++|.+.+|+++..+
T Consensus         9 ~~~~IgvIG-lG~MG~~lA~~La~~G~~V~v~dr~~~~~~   47 (497)
T 2p4q_A            9 MSADFGLIG-LAVMGQNLILNAADHGFTVCAYNRTQSKVD   47 (497)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSHHHH
T ss_pred             CCCCEEEEe-eHHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            445566676 678999999999999999999999987653

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=94.69  E-value=0.22  Score=35.69  Aligned_cols=37  Identities=11%  Similarity=0.175  Sum_probs=31.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      ++++.|+|+ |.+|.+++..|+..|.  ++++++++++..
T Consensus         9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~   47 (326)
T 3vku_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKT   47 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHH
Confidence            457888995 8999999999999886  899999976544

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=94.65  E-value=0.15  Score=37.34  Aligned_cols=33  Identities=18%  Similarity=0.206  Sum_probs=28.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      +++++|.|++ -+|+.+++.+.+.|++|++++ +.
T Consensus        24 ~~~I~ilGgG-~lg~~l~~aa~~lG~~v~~~d-~~   56 (403)
T 3k5i_A           24 SRKVGVLGGG-QLGRMLVESANRLNIQVNVLD-AD   56 (403)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEE-CC
Confidence            6889999964 699999999999999999998 53

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=94.61  E-value=0.091  Score=35.67  Aligned_cols=35  Identities=14%  Similarity=0.275  Sum_probs=30.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |+.+||.|+ |-+|...++.|++.|++|+++++...
T Consensus        31 gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~   65 (223)
T 3dfz_A           31 GRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVS   65 (223)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            788999995 57899999999999999999988644

>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1

Probab=94.60  E-value=0.22  Score=39.58  Aligned_cols=33  Identities=27%  Similarity=0.449  Sum_probs=27.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      .+++|.| .||+|..+++.|++.|. ++.+++.+.
T Consensus       412 ~~vlvvG-~GglG~~~~~~L~~~Gvg~i~l~D~d~  445 (805)
T 2nvu_B          412 CKVLVIG-AGGLGCELLKNLALSGFRQIHVIDMDT  445 (805)
T ss_dssp             CCEEEEC-CSSHHHHHHHHHHTTTCCEEEEEECCB
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCe
Confidence            4678887 67899999999999997 888888763

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=94.57  E-value=0.049  Score=41.26  Aligned_cols=37  Identities=16%  Similarity=0.184  Sum_probs=33.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|.|. |.||..+++.+...|++|+++++++...
T Consensus       274 GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~  310 (494)
T 3ce6_A          274 GKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINA  310 (494)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             cCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            789999995 8999999999999999999999987653

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=94.56  E-value=0.43  Score=35.97  Aligned_cols=33  Identities=27%  Similarity=0.331  Sum_probs=28.2

Q ss_pred             EEEEecCCcchHHHHHHHHHHc-CC-eEEEeecCch
Q psy7029           4 IIVVTGASVGIGAAILRALAAK-GH-QVIGFARRAE   37 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~-g~-~v~~~~r~~~   37 (125)
                      ++-|.| .|-+|..+|..|++. |+ +|++++++++
T Consensus        20 kIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           20 KIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             EEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            344455 678999999999999 99 9999999987

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=94.53  E-value=0.63  Score=34.67  Aligned_cols=38  Identities=26%  Similarity=0.198  Sum_probs=30.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++.|.| .|-+|..++..|++.|++|++++++++..
T Consensus         1 M~mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v   38 (450)
T 3gg2_A            1 MSLDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKI   38 (450)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHH
Confidence            434555666 58899999999999999999999997654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	125
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-16
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-16
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-16
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-16
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-15
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-15
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	4e-15
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	5e-15
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	9e-15
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-14
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-14
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-14
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	8e-14
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-13
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-13
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	5e-13
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	8e-13
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	8e-13
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-12
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-12
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-12
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-12
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	3e-12
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-12
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-12
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-12
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	5e-12
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-12
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	5e-12
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	7e-12
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	8e-12
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	9e-12
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-11
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-11
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	5e-11
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	5e-11
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-11
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	6e-11
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-11
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-10
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-10
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-10
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	7e-10
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	8e-10
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-09
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-09
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-09
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-09
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-09
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	8e-09
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-08
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-08
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	5e-08
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-07
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	4e-07
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	5e-07
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	7e-07
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-07
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-06
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-06
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-06
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	5e-06
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	1e-05
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	1e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-05
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-05
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-05
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-05
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	6e-05
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	6e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	7e-05
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	7e-05
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	8e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	9e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	3e-04
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	4e-04
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	5e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	7e-04
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	8e-04
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	0.002
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.003
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.003

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (173), Expect = 2e-16
 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 27/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTGAS GIGAA+ RAL  +G +V+G AR    I+                      
Sbjct: 11  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE---------------------- 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                E+            +   + D++ + +++  F  I ++   +D+ INNAG+    
Sbjct: 49  -----ELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPD 103

Query: 123 PV 124
            +
Sbjct: 104 TL 105

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 69.5 bits (170), Expect = 3e-16
 Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 35/122 (28%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++VTG + GIG AI +A A +G  V     R E  + AE++                 
Sbjct: 6   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI----------------- 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                  +VD+  + E V   +      G +DV++NNA +    
Sbjct: 49  ------------------GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG 90

Query: 123 PV 124
             
Sbjct: 91  SA 92

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 69.7 bits (170), Expect = 4e-16
 Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTG S G+G  I + LA  G  V+  +R  E                         
Sbjct: 6   RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLE------------------------- 40

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A        E    +  + + DV+   EV +  + +  KFG +D ++N AG+N   
Sbjct: 41  ---EASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH 97

Query: 123 PV 124
           P 
Sbjct: 98  PA 99

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 69.1 bits (169), Expect = 5e-16
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 31/122 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ V+TG + GIG AI    A +G  +                                 
Sbjct: 6   KLAVITGGANGIGRAIAERFAVEGADIAIADLVP-------------------------- 39

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A   +A  +     +V ++K DV++  +V      + + FG  D+++NNAG+    
Sbjct: 40  ----APEAEAAIRNLGR-RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI 94

Query: 123 PV 124
           P 
Sbjct: 95  PF 96

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 68.4 bits (167), Expect = 1e-15
 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 26/121 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TG+S GIG A     A +G +V    R AE ++                      
Sbjct: 6   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQ------------------ 47

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                     +A    +  V+S+  DVT DA   E       KFG +D+++NNAG     
Sbjct: 48  --------QILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPD 99

Query: 123 P 123
            
Sbjct: 100 S 100

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 67.7 bits (165), Expect = 3e-15
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 26/122 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TG+S GIG       A +G  V    R +E ++    +                 
Sbjct: 6   KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIIL--------------- 50

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                           + +V+S+  DVT +    +  +    +FG IDV++NNAG     
Sbjct: 51  -----------KSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPD 99

Query: 123 PV 124
             
Sbjct: 100 AF 101

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 4e-15
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 24/122 (19%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTG + GIG AI++ L   G  V+  +R+ E +  A                    
Sbjct: 13  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSA-------------------- 52

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               A+ + A        +V  ++ ++  + EV        + FG I+ ++NN G    +
Sbjct: 53  ----ADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS 108

Query: 123 PV 124
           P 
Sbjct: 109 PA 110

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 66.6 bits (162), Expect = 5e-15
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TGA  GIG  I    A  G  V+     A+  +         VD +   G     
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHV-------VDEIQQLGG---- 60

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             +  + + D+T + E+    D+  +K G +D+++NNAG     
Sbjct: 61  ------------------QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPK 102

Query: 123 PV 124
           P 
Sbjct: 103 PF 104

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 9e-15
 Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 27/121 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA+ GIG A   AL  KG +V       E                         
Sbjct: 4   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLE------------------------- 38

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                +   A+ ++    K   ++ DV    ++ + F  + + FG +D+++NNAGVN   
Sbjct: 39  --AGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK 96

Query: 123 P 123
            
Sbjct: 97  N 97

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 65.1 bits (158), Expect = 2e-14
 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 27/119 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +++++TG   G+G A    LAA+G ++      +E ++ ++                   
Sbjct: 5   RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASK------------------- 45

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                    A+ +  PD +V +   DV+ +A+V         +FG ID   NNAG+   
Sbjct: 46  --------AAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGK 96

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 64.7 bits (157), Expect = 3e-14
 Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 28/123 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K I+VTG + GIG A  RA+AA G  V    R A                          
Sbjct: 10  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAA------------------------- 44

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                E+ + + KE    K  + + DV+    V +    I+   G I  +I NAGV+   
Sbjct: 45  --DAVEVTEKVGKEFGV-KTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVK 101

Query: 123 PVT 125
           P T
Sbjct: 102 PAT 104

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 64.3 bits (156), Expect = 4e-14
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++VTG + GIG AI+   A  G  +   AR    ++         +     KG QV G
Sbjct: 9   KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNEC-------LSKWQKKGFQVTG 61

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEF 121
                                    D +   E  +    +++ F G +D++INN G    
Sbjct: 62  SV----------------------CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS 99

Query: 122 APV 124
            P 
Sbjct: 100 KPT 102

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 63.1 bits (153), Expect = 8e-14
 Identities = 15/114 (13%), Positives = 31/114 (27%), Gaps = 35/114 (30%)

Query: 6   VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           +VT      G      L+  GH V       +  D  E+    +                
Sbjct: 4   IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYP--------------- 48

Query: 66  RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN 119
                               ++    + E  E  + + + +G +DV+++N    
Sbjct: 49  --------------------QLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFA 82

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 61.9 bits (150), Expect = 3e-13
 Identities = 20/122 (16%), Positives = 45/122 (36%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTG + G+G  +++ L                                 +G +V  
Sbjct: 7   KVALVTGGASGVGLEVVKLL-------------------------------LGEGAKVAF 35

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                     +A E  + +   ++ DV+ +A+       +  + G ++V++NNAG+    
Sbjct: 36  SDINEAAGQQLAAELGE-RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPG 94

Query: 123 PV 124
            +
Sbjct: 95  DM 96

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 61.2 bits (148), Expect = 5e-13
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              +VTG S GIG  I+  LA+ G  V   +R  + ++                      
Sbjct: 9   CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDC-------------------- 48

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGH-IDVMINNAGVNEF 121
                         +  +KV +   D++  +E  E  + + N F   +++++NNAG+  +
Sbjct: 49  ---------LTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY 99

Query: 122 APV 124
              
Sbjct: 100 KEA 102

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 61.2 bits (148), Expect = 5e-13
 Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 30/122 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TG ++GIG AI      +G +V+   R +++ +                      
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE---------------------- 44

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                    A        ++   + D + +    + FD     FG +  ++NNAG+    
Sbjct: 45  --------KAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK 96

Query: 123 PV 124
            V
Sbjct: 97  SV 98

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.5 bits (146), Expect = 8e-13
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 32/121 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +V+G + G+GA+ +RA+                                A+G +V+ 
Sbjct: 7   KVALVSGGARGMGASHVRAM-------------------------------VAEGAKVVF 35

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                E   AMA E  D     + +DVT+ A+   A D     FG + V++NNAG+    
Sbjct: 36  GDILDEEGKAMAAELAD-AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG 94

Query: 123 P 123
            
Sbjct: 95  T 95

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 60.8 bits (147), Expect = 8e-13
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 26/121 (21%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TG+S GIG +     A +G QV    R  + ++            +   G     
Sbjct: 5   KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEET-------KQQILKAGV---- 53

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                          P  K++++  DVT+ +   +  +    KFG ID+++NNAG N   
Sbjct: 54  ---------------PAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLAD 98

Query: 123 P 123
            
Sbjct: 99  G 99

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 60.1 bits (145), Expect = 1e-12
 Identities = 22/123 (17%), Positives = 38/123 (30%), Gaps = 29/123 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++   A  GIG    R L  +  +      R E                         
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE------------------------- 40

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKD-AEVVEAFDWINNKFGHIDVMINNAGVNEF 121
                  +  +   NP   +     DVT   AE  +    I ++   +D++IN AG+ + 
Sbjct: 41  ---NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD 97

Query: 122 APV 124
             +
Sbjct: 98  HQI 100

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.0 bits (145), Expect = 2e-12
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 23/123 (18%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++++VTGA  G+G A   A A +G  V+      +                        G
Sbjct: 8   RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGD----------------------FKG 45

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             + +   D + +E    +      +        +      + FG IDV++NNAG+    
Sbjct: 46  VGKGSSAADKVVEEIRR-RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDR 104

Query: 123 PVT 125
             +
Sbjct: 105 SFS 107

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 59.7 bits (143), Expect = 2e-12
 Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 10/122 (8%)

Query: 4   IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGF 63
           + +VTGA+  +G +I   L A+G+ V     R+          A    + A + +  I  
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA-----AEANALSATLNARRPNSAITV 58

Query: 64  ARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP 123
                 +                  VT      E        +G  DV++NNA      P
Sbjct: 59  QADLSNVATA-----PVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTP 113

Query: 124 VT 125
           + 
Sbjct: 114 LL 115

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 59.3 bits (143), Expect = 2e-12
 Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 34/122 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TGA+ GIG A L   A +G +++        +  A                    
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA-------------------- 45

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               AE + A          H + +DV   A V   F       G +D +++ AG+    
Sbjct: 46  ----AEAVGA----------HPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDN 91

Query: 123 PV 124
             
Sbjct: 92  FH 93

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 59.4 bits (143), Expect = 3e-12
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 28/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++V+TG+S G+G ++    A +  +V+   R  E  D A S+    ++ +   G     
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE--DEANSV----LEEIKKVGG---- 57

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                             +  ++K DVT +++V+        +FG +DVMINNAG+    
Sbjct: 58  ------------------EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV 99

Query: 123 P 123
            
Sbjct: 100 S 100

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 59.3 bits (143), Expect = 3e-12
 Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 32/122 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           + +++TG + G+G A++    A+G +V    + AE +           ++    G  V+G
Sbjct: 6   EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLA----------ELETDHGDNVLG 55

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    DV    +  +A      +FG ID +I NAG+ +++
Sbjct: 56  IV----------------------GDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYS 93

Query: 123 PV 124
             
Sbjct: 94  TA 95

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 59.3 bits (143), Expect = 3e-12
 Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 30/121 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ ++TG + GIG    +     G +V+      +             + + +       
Sbjct: 7   KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKV-------CNNIGSPD----- 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                              +  +  DVTKD +V    D    K G +D+M  N GV    
Sbjct: 55  ------------------VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTT 96

Query: 123 P 123
           P
Sbjct: 97  P 97

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 58.6 bits (141), Expect = 4e-12
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ + TGA  GIG  I   L  +G  V+     +                          
Sbjct: 7   KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS------------------------- 41

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
             + AE + A  K+    +  +++ D++K +EVV  FD   + FG +D +++N+G+  + 
Sbjct: 42  --KAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWC 98

Query: 123 PV 124
             
Sbjct: 99  DE 100

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 58.6 bits (141), Expect = 5e-12
 Identities = 28/121 (23%), Positives = 42/121 (34%), Gaps = 32/121 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K I+VTGA+ GIG A L   A +G  ++   R   ++           + VAA   + I 
Sbjct: 6   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA----------EAVAALEAEAIA 55

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    DV+    V   F     +FG +  + + AGV   A
Sbjct: 56  V----------------------VADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSA 93

Query: 123 P 123
            
Sbjct: 94  L 94

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 58.5 bits (141), Expect = 5e-12
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 32/121 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K +++TG + G+GA   R   A G +V+      E                         
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGA---------------------- 43

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                    A A+E  D       +DVT + +      +   +FG +D ++NNAG++   
Sbjct: 44  ---------ATARELGD-AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM 93

Query: 123 P 123
            
Sbjct: 94  F 94

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 58.6 bits (141), Expect = 5e-12
 Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 28/123 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA  GIG  +   L  +G +VI     +                          
Sbjct: 19  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANST------------------------- 53

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
               AE + A  K+N       +K +V    ++V  F+     FG +D++ +N+GV  F 
Sbjct: 54  --ESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFG 110

Query: 123 PVT 125
            V 
Sbjct: 111 HVK 113

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 58.2 bits (140), Expect = 7e-12
 Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 29/122 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           ++ +VTGA+ GIG  I R L  +G +V   AR  E +          +  +   G +  G
Sbjct: 3   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTT-------LKELREAGVEADG 55

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    DV    E+      +  ++G +DV++NNAG     
Sbjct: 56  R----------------------TCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 93

Query: 123 PV 124
             
Sbjct: 94  AT 95

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (139), Expect = 8e-12
 Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 33/121 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K++VVTG   GIGA I+RA    G +V+   +                            
Sbjct: 7   KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR---------------------- 44

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                    A+ +E P      +  DVT++ +V         +FG +D ++NNAG +   
Sbjct: 45  ---------ALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP 93

Query: 123 P 123
            
Sbjct: 94  Q 94

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 57.9 bits (139), Expect = 9e-12
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 27/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ VVTG++ GIG  I  ALAA+G  ++                                
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD-------------------------- 38

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
            A   E + A        KV     D++K   V    D    + G ID+++NNAG+   A
Sbjct: 39  -AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTA 97

Query: 123 PV 124
            +
Sbjct: 98  LI 99

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.9 bits (137), Expect = 2e-11
 Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 37/122 (30%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              +VTGA  GIG   ++AL A G +V+   R    +                       
Sbjct: 6   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV---------------------- 43

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                    ++AKE P   +  + VD+       +A        G +D+++NNA +    
Sbjct: 44  ---------SLAKECP--GIEPVCVDLGDWDATEKALG----GIGPVDLLVNNAALVIMQ 88

Query: 123 PV 124
           P 
Sbjct: 89  PF 90

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 57.2 bits (137), Expect = 2e-11
 Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 33/122 (27%)

Query: 1   MS-KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQ 59
           MS   +VVTGA+ GIG  +++ L    +                                
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIR-----------------------------H 31

Query: 60  VIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGH--IDVMINNAG 117
           +I  AR  E    +       +VH L + VT D  +      +    G   + ++INNAG
Sbjct: 32  IIATARDVEKATELKSIKDS-RVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAG 90

Query: 118 VN 119
           V 
Sbjct: 91  VL 92

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 55.5 bits (133), Expect = 5e-11
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 26/124 (20%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            I+++TGA  GIG AI    A        F                           ++ 
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDF------------------------EPVLVL 37

Query: 63  FARRAEMIDAMAKE--NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
            +R A  ++ ++ E         ++  D++  A+V      I  ++GHID ++NNAGV  
Sbjct: 38  SSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR 97

Query: 121 FAPV 124
           F  +
Sbjct: 98  FGAL 101

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 5e-11
 Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+  +TG   G+G  +   L++ G Q +  +R+ +++                       
Sbjct: 26  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK---------------------- 63

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                   + ++ +  + KVH+++ DV     V      +    GH +++INNA  N  +
Sbjct: 64  -----ATAEQISSQTGN-KVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFIS 117

Query: 123 PV 124
           P 
Sbjct: 118 PT 119

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 6e-11
 Identities = 19/121 (15%), Positives = 43/121 (35%), Gaps = 29/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           +I+++TGA  GIG       A    +++ +      ++   +                  
Sbjct: 8   EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC---------------- 51

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                        +    KVH+  VD +   ++  +   +  + G + +++NNAGV   +
Sbjct: 52  -------------KGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS 98

Query: 123 P 123
            
Sbjct: 99  D 99

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 55.6 bits (133), Expect = 6e-11
 Identities = 33/121 (27%), Positives = 43/121 (35%), Gaps = 29/121 (23%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA  GIG AI   L   G  V              S      +I  A GH    
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVAS------EINQAGGH---- 51

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                ++KVDV+   +V  A +      G  DV++NNAGV    
Sbjct: 52  -------------------AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPST 92

Query: 123 P 123
           P
Sbjct: 93  P 93

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 55.3 bits (132), Expect = 8e-11
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 23/119 (19%)

Query: 6   VVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR 65
           V+TG +  IG +I   L  +G +V+   R +E                           R
Sbjct: 5   VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAA-----------------------QR 41

Query: 66  RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV 124
               ++A    +       L +  +      +  D     FG  DV++NNA      P+
Sbjct: 42  LVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPL 100

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 54.4 bits (130), Expect = 2e-10
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 30/123 (24%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
              +VTG S GIG AI+  LA  G +V   +R  + +D         ++I   KG  V G
Sbjct: 7   TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC-------LEIWREKGLNVEG 59

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEF 121
                                    D+    E  +    + + F G +++++NNAGV   
Sbjct: 60  S----------------------VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH 97

Query: 122 APV 124
              
Sbjct: 98  KEA 100

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 53.6 bits (128), Expect = 3e-10
 Identities = 29/114 (25%), Positives = 40/114 (35%), Gaps = 29/114 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA   IG A    LA +G  +       E ++ A          V  KG     
Sbjct: 6   KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKA-------EASVREKGV---- 54

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
                             +  S   DVT +  V+   D +   FG ID + NNA
Sbjct: 55  ------------------EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNA 90

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 3e-10
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 37/122 (30%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           + ++VTGA  GIG   ++AL A G +V+  +R    +D                      
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD---------------------- 45

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                    ++ +E P   +  + VD+        A        G +D+++NNA V    
Sbjct: 46  ---------SLVRECP--GIEPVCVDLGDWEATERALG----SVGPVDLLVNNAAVALLQ 90

Query: 123 PV 124
           P 
Sbjct: 91  PF 92

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 52.4 bits (125), Expect = 7e-10
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 40/124 (32%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           +S+ ++VTG + GIG AI + LAA GH+V    R +                        
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------------- 45

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
                                +  ++VDVT    V  AF  +    G ++V+++NAG++ 
Sbjct: 46  --------------------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA 85

Query: 121 FAPV 124
            A +
Sbjct: 86  DAFL 89

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 8e-10
 Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 32/125 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + +VTG + GIG AI+R L                                     V+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLF------------------------------SGDVVL 33

Query: 63  FARRAEMIDAMAKE--NPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE 120
            AR      A  ++           ++D+     +    D++  ++G +DV++NNAG+  
Sbjct: 34  TARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAF 93

Query: 121 FAPVT 125
                
Sbjct: 94  KVADP 98

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.9 bits (124), Expect = 1e-09
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 29/113 (25%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K+ +VTGA  GIG  I + LA     VI  +R  +  D         VD + + G++  G
Sbjct: 11  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSV-------VDEIKSFGYESSG 63

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINN 115
           +A                       DV+K  E+ E  + I  +  ++D+++NN
Sbjct: 64  YA----------------------GDVSKKEEISEVINKILTEHKNVDILVNN 94

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 52.1 bits (124), Expect = 1e-09
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 32/120 (26%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K  ++TG++ GIG A   A                                  +G +V  
Sbjct: 6   KTALITGSARGIGRAFAEAY-------------------------------VREGARVAI 34

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                E   A A E       ++ +DVT  A +      + +++G ID+++NNA + + A
Sbjct: 35  ADINLEAARATAAEIGP-AACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLA 93

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.6 bits (120), Expect = 3e-09
 Identities = 26/129 (20%), Positives = 41/129 (31%), Gaps = 36/129 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            + V+TGAS G G A+   LA                               + G  ++ 
Sbjct: 7   AVCVLTGASRGFGRALAPQLARLL----------------------------SPGSVMLV 38

Query: 63  FARRAEMIDAMAKE----NPDWKVHSLKVDVTKDAEVVEAF----DWINNKFGHIDVMIN 114
            AR   M+  + +E     PD KV     D+  +A V        +    +     ++IN
Sbjct: 39  SARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLIN 98

Query: 115 NAGVNEFAP 123
           NA       
Sbjct: 99  NAATLGDVS 107

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 4e-09
 Identities = 23/122 (18%), Positives = 37/122 (30%), Gaps = 28/122 (22%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++VTGAS GIG  +   LA  G  V+  AR  E                         
Sbjct: 15  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKE------------------------- 49

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                + + +   E      H +   +       +         G +D++I N   N   
Sbjct: 50  ---TLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL 106

Query: 123 PV 124
            +
Sbjct: 107 NL 108

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 50.1 bits (119), Expect = 5e-09
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 32/116 (27%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           S ++VVTGAS GIG AI  +L   G +V                              ++
Sbjct: 1   SPVVVVTGASRGIGKAIALSLGKAGCKV------------------------------LV 30

Query: 62  GFARRAEMIDAMAKENPD--WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINN 115
            +AR A+  + ++K+      +  +   DV+K+A+V        + +G IDV++NN
Sbjct: 31  NYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNN 86

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 49.8 bits (117), Expect = 8e-09
 Identities = 23/118 (19%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 3   KIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           K   + G +   G G A+ ++LAA G +++       +  F  SL     D         
Sbjct: 9   KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGS 68

Query: 61  IGFARRAEMIDAM---AKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINN 115
           +   ++   +DA+    ++ P+    + +   + +  V EA + +   FG ID+++++
Sbjct: 69  LMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHS 126

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 47.7 bits (113), Expect = 3e-08
 Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 44/122 (36%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
           K ++V  AS GIG A+   L+ +G +V   AR  E              ++   GH+ + 
Sbjct: 5   KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE--------------LLKRSGHRYV- 49

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA 122
                                    D+ KD +++        K   +D+++ NAG  +  
Sbjct: 50  -----------------------VCDLRKDLDLLFE------KVKEVDILVLNAGGPKAG 80

Query: 123 PV 124
             
Sbjct: 81  FF 82

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 48.0 bits (113), Expect = 3e-08
 Identities = 23/123 (18%), Positives = 38/123 (30%), Gaps = 47/123 (38%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            IIV++G + GIGAA  + L A GHQ++G   R                           
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA------------------------- 36

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAF-DWINNKFGHIDVMINNAGVNEF 121
                                 +  D++      +A  D +      +D ++  AG+   
Sbjct: 37  ---------------------EVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ 75

Query: 122 APV 124
             V
Sbjct: 76  TKV 78

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 47.6 bits (111), Expect = 5e-08
 Identities = 16/120 (13%), Positives = 45/120 (37%), Gaps = 5/120 (4%)

Query: 3   KIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
            I  + G   + G G  I + L+ +  ++I          F ++      D         
Sbjct: 3   DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDK 62

Query: 61  IGFARRAEMIDA---MAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                     DA    A +  +   ++ + ++ ++  + +  + I+ K+G I++++++  
Sbjct: 63  KMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLA 122

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 45.5 bits (107), Expect = 2e-07
 Identities = 20/35 (57%), Positives = 23/35 (65%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE 37
          KI +VTGAS GIG AI   LAA+G +VIG A    
Sbjct: 5  KIALVTGASRGIGRAIAETLAARGAKVIGTATSEN 39

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 4e-07
 Identities = 8/35 (22%), Positives = 14/35 (40%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE 37
           + V+TG + G+G A    L  +G   +       
Sbjct: 6  LVAVITGGASGLGLATAERLVGQGASAVLLDLPNS 40

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 5e-07
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDI 52
          K+I++T A+ GIG A   A A +G +VI        +   E        +
Sbjct: 7  KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV 56

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 44.3 bits (103), Expect = 7e-07
 Identities = 15/53 (28%), Positives = 22/53 (41%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAA 55
          K I V GA+   GA+++R  AA GH V       + +   E      V +   
Sbjct: 4  KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQG 56

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.7 bits (102), Expect = 9e-07
 Identities = 13/108 (12%), Positives = 27/108 (25%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           S  ++V G    +G+AIL      G+ V+     A     +  L     +    +   + 
Sbjct: 2   SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILE 61

Query: 62  GFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHI 109
             A   +                         +  +     +     I
Sbjct: 62  QTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 109

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 43.6 bits (102), Expect = 1e-06
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE 37
          +  +VTG + G+G A   AL A+G++V+    R E
Sbjct: 2  RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE 36

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 1e-06
 Identities = 14/115 (12%), Positives = 32/115 (27%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIG 62
            ++++TG S GIG  +   LA+   Q          +     L+     +    G     
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 63  FARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAG 117
                +     A      +     +       ++   + +        + +N  G
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 43.3 bits (100), Expect = 2e-06
 Identities = 11/44 (25%), Positives = 24/44 (54%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLF 46
           +++VTGA+  + + ++  L   G++V G AR A  +   +  +
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRW 55

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.9 bits (100), Expect = 2e-06
 Identities = 7/54 (12%), Positives = 17/54 (31%)

Query: 2  SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAA 55
          ++ ++V G    +G+  ++A  A+   V            A  +          
Sbjct: 2  ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQ 55

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 42.0 bits (97), Expect = 5e-06
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 3  KIIVVTGASVGIGAAILRAL---AAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGH 58
            I++TG + G+G  +++AL         +    R  E     E L     +I   +  
Sbjct: 3  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEID 61

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 40.9 bits (94), Expect = 1e-05
 Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARR------AEMIDFAESLFAFFVDIVAAK 56
             I++ GA+  IG  + +A    GH      R       +E     ES  A   +IV   
Sbjct: 4   SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS 63

Query: 57  GHQVIGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGH 108
                      + +D +       ++ S    +    EV     +  ++FG+
Sbjct: 64  IDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN 115

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 40.7 bits (94), Expect = 1e-05
 Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 3/110 (2%)

Query: 3   KIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           K I+VTG +  + I   I +A+  +G ++    +  ++    E   A     +  +    
Sbjct: 6   KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVA 65

Query: 61  IGFA-RRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHI 109
              +               D  VHS+        +           F   
Sbjct: 66  EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIA 115

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.4 bits (93), Expect = 2e-05
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 2   SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVI 61
           SKI++VTG +  IG+  +  L   G+  +         + + S +     +     H + 
Sbjct: 1   SKIVLVTGGAGYIGSHTVVELIENGYDCVVA------DNLSNSTYDSVARLEVLTKHHIP 54

Query: 62  GF----ARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVM 112
            +      R  +     +   D  +H   +    ++  +    + NN  G + ++
Sbjct: 55  FYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLL 109

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 40.4 bits (93), Expect = 2e-05
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFA 47
            ++VTG + G+G  I R LA +G   +   +R     D A  L A
Sbjct: 10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVA 55

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (92), Expect = 2e-05
 Identities = 9/41 (21%), Positives = 15/41 (36%)

Query: 1  MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDF 41
            K I + GA+   G   L      G++V    R +  +  
Sbjct: 2  AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS 42

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 40.1 bits (92), Expect = 2e-05
 Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 2/37 (5%)

Query: 3  KIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRAE 37
          K I+V+G      I   I R    +G Q++       
Sbjct: 7  KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRL 43

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 38.7 bits (89), Expect = 6e-05
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 5/80 (6%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM-IDFAESLFAFF----VDIVAAKG 57
          + + + G    +G+AI R L  +G   +    R E+ +  + ++  FF    +D V    
Sbjct: 3  QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAA 62

Query: 58 HQVIGFARRAEMIDAMAKEN 77
           +V G             +N
Sbjct: 63 AKVGGIVANNTYPADFIYQN 82

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 38.7 bits (89), Expect = 6e-05
 Identities = 20/116 (17%), Positives = 34/116 (29%), Gaps = 32/116 (27%)

Query: 3   KIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
           K  +V G +    +G AI   L   G +V    +   +   AE                 
Sbjct: 9   KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE----------------- 51

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA 116
                                    + DVT+D E+   F  +   FG +D +++  
Sbjct: 52  -------------KLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAI 94

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 38.6 bits (89), Expect = 7e-05
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 2  SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA 36
          SK+ ++TG +   G+ +   L  KG++V G  RRA
Sbjct: 1  SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA 35

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 38.5 bits (88), Expect = 7e-05
 Identities = 5/78 (6%), Positives = 17/78 (21%), Gaps = 2/78 (2%)

Query: 3  KIIVVTGAS--VGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
          K  ++ G +    I   I ++   +G  +        +      +          +    
Sbjct: 6  KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVS 65

Query: 61 IGFARRAEMIDAMAKENP 78
               ++           
Sbjct: 66 KEEHFKSLYNSVKKDLGS 83

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 8e-05
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 1  MSKIIVVTGASVGIGAAILRALAAKGHQVIGF 32
          M++ ++VTG +  IG+  +  L   G+  +  
Sbjct: 1  MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVI 32

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 38.2 bits (87), Expect = 9e-05
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARR 35
          +++ G +  IG  I+ A  + GH      R 
Sbjct: 6  VLIVGGTGYIGKRIVNASISLGHPTYVLFRP 36

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 37.9 bits (86), Expect = 1e-04
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID 40
          K + VTG +   G  +   L   G  V G++  A  + 
Sbjct: 9  KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVP 46

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.2 bits (85), Expect = 2e-04
 Identities = 18/112 (16%), Positives = 35/112 (31%)

Query: 1   MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQV 60
             K+ ++TG +  IG+ +L  L     +V+G    A             V        + 
Sbjct: 15  QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKF 74

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVM 112
           I    R       A    D+ +H   +     +          N  G ++++
Sbjct: 75  IQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNML 126

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 2e-04
 Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 2/104 (1%)

Query: 3   KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFA--ESLFAFFVDIVAAKGHQV 60
            + ++TG +   G+ +   L  KG++V G  RR+   +    E L+      +       
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 61  IGFARRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINN 104
            G    +  +  +  E    ++++L            A    + 
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADV 105

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.4 bits (85), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARR 35
          KI ++TG +   G+ +   L  KG++V G  RR
Sbjct: 2  KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR 34

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 36.7 bits (83), Expect = 3e-04
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFF 49
          I++TGA+  +G  I + L  K  +VI    +   I    ++  FF
Sbjct: 4  ILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFF 48

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (82), Expect = 4e-04
 Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 2/85 (2%)

Query: 1  MSKIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMIDFAESLFAFFVDIVAAKGH 58
           +K + + GAS   G  +L+ +  +G   +V    RR    D           +   K  
Sbjct: 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD 72

Query: 59 QVIGFARRAEMIDAMAKENPDWKVH 83
                +  ++              
Sbjct: 73 DYASAFQGHDVGFCCLGTTRGKAGA 97

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 35.8 bits (81), Expect = 5e-04
 Identities = 9/38 (23%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID 40
          ++ ++ G    +G  +   LA  GH+++  +RR E  +
Sbjct: 2  RVALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAE 38

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.8 bits (81), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFARR 35
          +  +VTG +   GA + + L  KG++V G   R
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVAR 33

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.3 bits (80), Expect = 8e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFARR 35
          I +TGA   I + I R L  +GH VI    +
Sbjct: 18 ISITGAGGFIASHIARRLKHEGHYVIASDWK 48

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.0 bits (76), Expect = 0.002
 Identities = 7/29 (24%), Positives = 13/29 (44%)

Query: 5  IVVTGASVGIGAAILRALAAKGHQVIGFA 33
          ++VTGAS   G  + + L     + +   
Sbjct: 6  VLVTGASGRTGQIVYKKLKEGSDKFVAKG 34

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 3  KIIVVTGASVGIGAAILRALAAKGHQVIGFAR 34
          K I++TG +  +G+ +   L   GH+V     
Sbjct: 2  KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 33

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 33.8 bits (75), Expect = 0.003
 Identities = 12/108 (11%), Positives = 25/108 (23%), Gaps = 12/108 (11%)

Query: 5   IVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFA 64
           ++V G     G A    L+ K ++V         +   +        I +          
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRI----- 58

Query: 65  RRAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVM 112
                  +  K      +     D+     + E+F             
Sbjct: 59  -------SRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGE 99

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	125
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.9
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.9
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.89
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.89
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.89
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.88
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.88
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.88
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.88
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.88
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.88
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.88
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.88
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.88
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.88
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.88
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.87
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.87
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.87
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.87
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.87
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.87
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.87
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.86
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.86
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.86
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.86
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.86
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.86
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.86
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.86
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.86
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.86
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.85
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.85
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.85
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.85
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.84
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.84
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.83
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.83
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.82
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.82
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.82
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.82
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.81
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.81
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.8
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.78
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.78
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.75
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.74
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.72
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.72
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.71
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.7
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.68
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.67
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.64
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.63
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.62
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.58
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.58
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.57
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.53
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.51
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.45
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.39
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.34
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.33
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.33
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.32
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.31
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.29
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.27
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.25
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.22
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.2
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.18
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.17
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.13
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.12
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.02
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.02
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.98
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	98.96
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.94
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.89
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	98.87
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.83
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.81
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.73
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.62
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.6
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.38
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.25
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.24
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.16
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.14
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.08
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.04
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.04
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.95
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.95
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.91
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.83
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.8
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.76
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.67
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.66
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.59
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.57
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.56
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.54
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.51
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.48
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.39
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.37
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.36
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.35
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.32
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.3
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.24
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.21
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.17
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.09
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.07
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.07
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.03
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.98
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.89
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.79
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.77
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.73
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.67
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.55
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.53
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.52
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.5
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.38
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.37
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.31
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.28
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.27
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.2
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.16
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.14
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.12
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	96.07
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.02
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.97
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.81
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.8
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.72
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.6
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	95.58
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.57
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.55
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.25
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.23
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.17
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.15
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.1
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	95.09
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.05
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.03
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.95
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.93
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.91
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.8
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.78
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.78
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.75
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	94.61
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.53
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.49
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.49
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.47
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.45
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	94.39
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.37
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.33
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.33
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.21
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.19
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.14
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.12
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.1
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.09
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.07
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.99
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.88
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	93.84
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.77
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	93.7
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	93.69
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.66
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	93.64
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	93.53
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.51
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.45
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.42
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.41
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.38
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	93.35
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	93.28
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	93.22
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.17
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.09
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.99
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.95
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	92.88
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	92.82
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.8
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.72
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.64
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.55
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.55
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	92.48
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	92.47
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.4
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	92.21
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.16
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	91.81
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	91.81
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.74
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	91.73
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	91.69
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.65
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	91.39
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	91.33
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	91.31
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	91.06
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	91.05
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	91.04
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.86
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	90.63
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	90.51
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	90.46
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	90.44
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	90.42
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	90.41
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	90.37
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	90.31
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	90.3
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	90.28
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	90.26
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.17
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	90.11
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	90.09
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	90.07
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.06
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.99
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	89.67
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	89.61
d1knxa2	177	HPr kinase HprK C-terminal domain {Mycoplasma pneu	89.56
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	89.16
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.04
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.8
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	88.79
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.68
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	88.59
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	88.41
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	88.37
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	88.25
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.23
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	88.21
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	88.21
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	88.09
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	88.06
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	87.98
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	87.4
d1ko7a2	169	HPr kinase HprK C-terminal domain {Staphylococcus	87.39
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	87.37
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	87.24
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	87.19
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	87.16
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	87.12
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.95
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	86.88
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	86.69
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	86.67
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	86.53
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	86.49
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	86.4
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	86.22
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	86.21
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	86.16
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	85.93
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	85.87
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	85.78
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	85.72
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.72
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	85.62
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	85.56
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	85.54
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	85.5
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.5
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	85.4
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	85.39
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	85.38
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	85.35
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.18
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	85.0
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.88
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	84.82
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	84.81
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	84.59
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	84.57
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	84.53
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	84.38
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	84.31
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	84.27
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	84.17
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	83.78
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	83.72
d1ihua1	296	Arsenite-translocating ATPase ArsA {Escherichia co	83.47
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	83.12
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	83.07
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	82.91
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	82.79
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	82.67
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	82.65
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	82.5
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	82.36
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	82.12
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	82.05
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	81.75
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	81.55
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	81.33
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	81.14
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	81.03
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	80.7
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	80.69
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	80.64
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	80.61
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	80.55
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	80.47
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	80.47
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	80.12
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	80.04

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.8e-23  Score=143.24  Aligned_cols=96  Identities=30%  Similarity=0.493  Sum_probs=84.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++|+.|+++|++|++++|+.+..                           ++..+++.......+
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l---------------------------~~~~~~l~~~~~~~~   62 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI---------------------------EELAAECKSAGYPGT   62 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH---------------------------HHHHHHHHHTTCSSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH---------------------------HHHHHHHHhcCCCce
Confidence            79999999999999999999999999999999987765                           233355554444458


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.+++||+++++++.++++.+.+++|+||+||||||.....++
T Consensus        63 ~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~  105 (257)
T d1xg5a_          63 LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTL  105 (257)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCT
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCcc
Confidence            9999999999999999999999999999999999999887665

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.90  E-value=3.3e-23  Score=143.41  Aligned_cols=94  Identities=28%  Similarity=0.411  Sum_probs=81.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..+                           +..+++...  +.+
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~---------------------------~~~~~l~~~--g~~   52 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLR---------------------------TTLKELREA--GVE   52 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            799999999999999999999999999999999877652                           222344332  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|+||+||||||+....++
T Consensus        53 ~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~   95 (257)
T d2rhca1          53 ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGAT   95 (257)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCG
T ss_pred             EEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCCh
Confidence            8899999999999999999999999999999999999887765

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=3.6e-23  Score=142.90  Aligned_cols=95  Identities=28%  Similarity=0.487  Sum_probs=81.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+...                           +..+++....+ .+
T Consensus         5 gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~---------------------------~~~~~l~~~~g-~~   56 (251)
T d1vl8a_           5 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEAS---------------------------EAAQKLTEKYG-VE   56 (251)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHHC-CC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHHHhC-Cc
Confidence            899999999999999999999999999999999987652                           22234433333 37


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|+||+||||||+....|+
T Consensus        57 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~   99 (251)
T d1vl8a_          57 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPA   99 (251)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            8899999999999999999999999999999999999877665

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.2e-23  Score=143.29  Aligned_cols=96  Identities=30%  Similarity=0.410  Sum_probs=83.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+...                           +....+.....+.+
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~---------------------------~~~~~l~~~~~~~~   55 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGV---------------------------QCKAALHEQFEPQK   55 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHTTTSCGGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHHhcCCCc
Confidence            899999999999999999999999999999999987652                           22344444444557


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        56 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~~~~   98 (254)
T d2gdza1          56 TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNW   98 (254)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSSH
T ss_pred             EEEEEeecCCHHHHHHHHHHHHHHcCCcCeecccccccccccc
Confidence            8999999999999999999999999999999999999877543

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.89  E-value=6.9e-23  Score=142.00  Aligned_cols=96  Identities=28%  Similarity=0.438  Sum_probs=81.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..+                           +....+.....+.+
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~---------------------------~~~~~~~~~~~~~~   56 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLE---------------------------ASKAAVLETAPDAE   56 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHCTTCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhhCCCCe
Confidence            899999999999999999999999999999999987652                           22233433444557


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC-cCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF-APV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~-~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+... .++
T Consensus        57 ~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~  100 (258)
T d1iy8a_          57 VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPT  100 (258)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCG
T ss_pred             EEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCch
Confidence            8999999999999999999999999999999999998753 443

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.88  E-value=1.2e-22  Score=140.41  Aligned_cols=93  Identities=30%  Similarity=0.432  Sum_probs=80.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |++||||+++|||+++++.|+++|++|++++|+++..+                           +..+++...  +.++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~---------------------------~~~~~i~~~--g~~~   52 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAK---------------------------AVASEINQA--GGHA   52 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCcE
Confidence            78999999999999999999999999999999987652                           222333332  2378


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        53 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~   94 (255)
T d1gega_          53 VAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPI   94 (255)
T ss_dssp             EEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCG
T ss_pred             EEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcH
Confidence            899999999999999999999999999999999999887765

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.88  E-value=7.7e-23  Score=141.77  Aligned_cols=95  Identities=35%  Similarity=0.456  Sum_probs=81.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+...                           +..+++....+ .+
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~---------------------------~~~~~~~~~~g-~~   60 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAV---------------------------EVTEKVGKEFG-VK   60 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHH---------------------------HHHHHHHHHHT-CC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHHHhC-Cc
Confidence            899999999999999999999999999999999987652                           22233333222 37


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        61 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~  103 (260)
T d1h5qa_          61 TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPA  103 (260)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCG
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCH
Confidence            8899999999999999999999999999999999999877664

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.88  E-value=7e-23  Score=141.77  Aligned_cols=91  Identities=29%  Similarity=0.413  Sum_probs=79.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..                               +.+..+.+ .+
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l-------------------------------~~~~~~~~-~~   52 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVREGARVAIADINLEAA-------------------------------RATAAEIG-PA   52 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHH-------------------------------HHHHHHHC-TT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHhC-Cc
Confidence            79999999999999999999999999999999987655                               22222222 26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        53 ~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~   95 (256)
T d1k2wa_          53 ACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPI   95 (256)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             eEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeeccccccccc
Confidence            8889999999999999999999999999999999999887664

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=1.3e-22  Score=139.64  Aligned_cols=92  Identities=32%  Similarity=0.410  Sum_probs=79.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+++..                               +.+..+.. .+
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~-~~   53 (244)
T d1nffa_           6 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG-------------------------------KAMAAELA-DA   53 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHTG-GG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHhh-Cc
Confidence            79999999999999999999999999999999987655                               22222222 26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT  125 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~  125 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....+++
T Consensus        54 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~   97 (244)
T d1nffa_          54 ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIE   97 (244)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTT
T ss_pred             ceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchh
Confidence            78899999999999999999999999999999999999887763

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.88  E-value=1.1e-22  Score=140.72  Aligned_cols=91  Identities=26%  Similarity=0.346  Sum_probs=79.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+..                               +.+.+..+ .+
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------------------------~~~~~~~~-~~   52 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG-------------------------------AATARELG-DA   52 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHTTG-GG
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHhC-Cc
Confidence            89999999999999999999999999999999987655                               22222222 37


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|+++++++.++++++.+++|++|+||||||+....++
T Consensus        53 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~   95 (254)
T d1hdca_          53 ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL   95 (254)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCG
T ss_pred             eEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCcccccccc
Confidence            8899999999999999999999999999999999999887765

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.88  E-value=7.3e-23  Score=141.89  Aligned_cols=96  Identities=30%  Similarity=0.390  Sum_probs=79.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++|++|+++|++|++++|++....                          ++..+.+.... +.+
T Consensus         4 gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~--------------------------~~~~~~~~~~~-g~~   56 (260)
T d1x1ta1           4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI--------------------------EKVRAGLAAQH-GVK   56 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHH--------------------------HHHHHHHHHHH-TSC
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHH--------------------------HHHHHHHHHhc-CCc
Confidence            899999999999999999999999999999999864321                          11112222222 337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        57 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~   99 (260)
T d1x1ta1          57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALI   99 (260)
T ss_dssp             EEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCch
Confidence            8899999999999999999999999999999999999887765

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=2.1e-22  Score=139.37  Aligned_cols=95  Identities=26%  Similarity=0.449  Sum_probs=81.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..+                           +..+++...  +.+
T Consensus        11 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------------------------~~~~~l~~~--g~~   61 (255)
T d1fmca_          11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAAN---------------------------HVVDEIQQL--GGQ   61 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHHc--CCc
Confidence            899999999999999999999999999999999877652                           222334332  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT  125 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~  125 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....+++
T Consensus        62 ~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e  105 (255)
T d1fmca_          62 AFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFD  105 (255)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTT
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCccc
Confidence            88999999999999999999999999999999999998877653

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=1.4e-22  Score=139.19  Aligned_cols=89  Identities=25%  Similarity=0.367  Sum_probs=77.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..                               +++.+..   .
T Consensus         5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l-------------------------------~~~~~~~---~   50 (242)
T d1ulsa_           5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL-------------------------------REAAEAV---G   50 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHTT---T
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHc---C
Confidence            79999999999999999999999999999999987655                               2222222   3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ..++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        51 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~   93 (242)
T d1ulsa_          51 AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFH   93 (242)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCG
T ss_pred             CeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCch
Confidence            5678999999999999999999999999999999999887765

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.5e-22  Score=137.42  Aligned_cols=94  Identities=21%  Similarity=0.355  Sum_probs=81.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++|||||++|||++++++|+++|++|++++|+.+...                           +..+++...  +.+
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~---------------------------~~~~~~~~~--~~~   57 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLE---------------------------ETAAKCKGL--GAK   57 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            899999999999999999999999999999999987662                           222333322  337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.||++|++++.++++++.+++|++|+||||||+..+.++
T Consensus        58 ~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~  100 (244)
T d1yb1a_          58 VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDL  100 (244)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCC
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccc
Confidence            8899999999999999999999999999999999999988765

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.88  E-value=2.4e-22  Score=138.69  Aligned_cols=94  Identities=22%  Similarity=0.427  Sum_probs=80.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..+                           +..+.+.   .+.+
T Consensus         6 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------------------------~~~~~~~---~~~~   55 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGE---------------------------KAAKSVG---TPDQ   55 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHC---CTTT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHhC---CCCc
Confidence            799999999999999999999999999999999876552                           2223332   2237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT  125 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~  125 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....+++
T Consensus        56 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~   99 (251)
T d1zk4a1          56 IQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVE   99 (251)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTT
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchh
Confidence            88999999999999999999999999999999999999887653

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.88  E-value=2.1e-22  Score=138.71  Aligned_cols=92  Identities=27%  Similarity=0.415  Sum_probs=78.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.....                              +...... +.+
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~------------------------------~~~~~~~-g~~   53 (247)
T d2ew8a1           5 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA------------------------------EAAIRNL-GRR   53 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH------------------------------HHHHHHT-TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH------------------------------HHHHHHc-CCc
Confidence            899999999999999999999999999999999865321                              1111122 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        54 ~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~   96 (247)
T d2ew8a1          54 VLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPF   96 (247)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence            8899999999999999999999999999999999999887765

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.87  E-value=3.8e-22  Score=138.47  Aligned_cols=95  Identities=28%  Similarity=0.438  Sum_probs=80.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+...                          ++..+.+...  +.+
T Consensus         7 gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~--------------------------~~~~~~~~~~--g~~   58 (261)
T d1geea_           7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA--------------------------NSVLEEIKKV--GGE   58 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHHT--TCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHH--------------------------HHHHHHHHhc--CCc
Confidence            899999999999999999999999999999999865321                          1222333322  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|+||+||||||+..+.++
T Consensus        59 ~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~  101 (261)
T d1geea_          59 AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS  101 (261)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcch
Confidence            8899999999999999999999999999999999999887664

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=1.9e-22  Score=138.72  Aligned_cols=91  Identities=36%  Similarity=0.531  Sum_probs=78.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+++..+                           +..+.+    + .+
T Consensus         4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~---------------------------~~~~~~----~-~~   51 (243)
T d1q7ba_           4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQ---------------------------AISDYL----G-AN   51 (243)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH---------------------------HHHHHH----G-GG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH---------------------------HHHHHh----C-CC
Confidence            899999999999999999999999999999999877552                           111222    1 25


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ..++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        52 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~   94 (243)
T d1q7ba_          52 GKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLL   94 (243)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCG
T ss_pred             CcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhcccccc
Confidence            7788999999999999999999999999999999999887765

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.87  E-value=5.5e-22  Score=136.88  Aligned_cols=94  Identities=29%  Similarity=0.449  Sum_probs=81.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+..+                           +..+.+...  +.+
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~---------------------------~~~~~l~~~--g~~   60 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD---------------------------SVVDEIKSF--GYE   60 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHH---------------------------HHHHHHHTT--TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            799999999999999999999999999999999877652                           222334322  337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        61 ~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~  103 (251)
T d2c07a1          61 SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLF  103 (251)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCT
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHhcCCceeeeecccccccccc
Confidence            8899999999999999999999999999999999999887665

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.87  E-value=4.7e-22  Score=138.61  Aligned_cols=96  Identities=29%  Similarity=0.408  Sum_probs=81.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc-CCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE-NPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   80 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+.++                           +..+.+... ....
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~---------------------------~~~~~l~~~~~~~~   57 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLE---------------------------ETRQIILKSGVSEK   57 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHTTTCCGG
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhcCCCCC
Confidence            799999999999999999999999999999999987652                           222333322 2234


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||+..+.++
T Consensus        58 ~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~  101 (272)
T d1xkqa_          58 QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAF  101 (272)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTT
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccc
Confidence            78999999999999999999999999999999999999876554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.7e-22  Score=138.61  Aligned_cols=94  Identities=24%  Similarity=0.370  Sum_probs=79.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++++||||+++|||+++|+.|+++ |++|++++|+.+..+                           +..+.+....  .
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~---------------------------~~~~~l~~~~--~   53 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQ---------------------------AAVQQLQAEG--L   53 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHH---------------------------HHHHHHHHTT--C
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHH---------------------------HHHHHHHhcC--C
Confidence            368899999999999999999986 899999999987662                           2334444332  3


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.+++||++|.++++++++++.+++|+||+||||||+....++
T Consensus        54 ~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~   97 (275)
T d1wmaa1          54 SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVAD   97 (275)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTC
T ss_pred             cEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCc
Confidence            67889999999999999999999999999999999999876543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.87  E-value=5.5e-22  Score=136.17  Aligned_cols=91  Identities=26%  Similarity=0.356  Sum_probs=79.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++|+.|+++|++|++++|+.+..                               +.+....+ .+
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------------------------------~~~~~~~~-~~   52 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLL-------------------------------AEAVAALE-AE   52 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHTCC-SS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHcC-Cc
Confidence            89999999999999999999999999999999987655                               23333333 37


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|+++++++.++++++.+++|++|+||||||.....++
T Consensus        53 ~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~   95 (241)
T d2a4ka1          53 AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALS   95 (241)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC-
T ss_pred             eEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccch
Confidence            8899999999999999999999999999999999999887665

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=8.3e-22  Score=138.97  Aligned_cols=96  Identities=25%  Similarity=0.473  Sum_probs=81.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc---CC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE---NP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   78 (125)
                      ||++|||||++|||+++++.|+++|++|++++|+.+...                           +..+++...   ..
T Consensus        12 gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~---------------------------~~~~el~~~~~~~~   64 (297)
T d1yxma1          12 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK---------------------------SAADELQANLPPTK   64 (297)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHTSCTTC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhhhcccc
Confidence            899999999999999999999999999999999987652                           222333222   23


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        65 ~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~  110 (297)
T d1yxma1          65 QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPA  110 (297)
T ss_dssp             CCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             CceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCch
Confidence            4579999999999999999999999999999999999999877654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.86  E-value=7e-22  Score=137.14  Aligned_cols=93  Identities=33%  Similarity=0.443  Sum_probs=76.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc-CCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE-NPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   80 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+..+                           +..+++... ....
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~---------------------------~~~~~l~~~~~~~~   57 (264)
T d1spxa_           5 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLE---------------------------ETRQQILAAGVSEQ   57 (264)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHTTCCGG
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhcCCCcC
Confidence            899999999999999999999999999999999987652                           222333332 2233


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ++.++++|+++++++.++++++.+++|++|+||||||+...
T Consensus        58 ~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~   98 (264)
T d1spxa_          58 NVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIP   98 (264)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC----
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccC
Confidence            68999999999999999999999999999999999998654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.86  E-value=1.1e-21  Score=136.01  Aligned_cols=94  Identities=31%  Similarity=0.444  Sum_probs=79.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..+                           +..+.+...  +.+
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~---------------------------~~~~~~~~~--g~~   55 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALE---------------------------KAEASVREK--GVE   55 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHTT--TSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            899999999999999999999999999999999877552                           222333322  347


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC-cCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF-APV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~-~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+... .++
T Consensus        56 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~   99 (260)
T d1zema1          56 ARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPV   99 (260)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCG
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCcc
Confidence            8899999999999999999999999999999999998754 443

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.86  E-value=1.7e-21  Score=134.90  Aligned_cols=94  Identities=26%  Similarity=0.446  Sum_probs=80.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..+                           +..+++...  +.+
T Consensus         8 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~---------------------------~~~~~~~~~--g~~   58 (259)
T d2ae2a_           8 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN---------------------------DCLTQWRSK--GFK   58 (259)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCC
Confidence            899999999999999999999999999999999877652                           222333332  337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcC-CccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFG-HIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g-~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.++++ ++|+||||||+....++
T Consensus        59 ~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~  102 (259)
T d2ae2a_          59 VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEA  102 (259)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCG
T ss_pred             ceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCcc
Confidence            88899999999999999999999987 79999999999887664

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=1.1e-21  Score=135.11  Aligned_cols=89  Identities=29%  Similarity=0.384  Sum_probs=76.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+++..+                            ..+..       .
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~----------------------------~~~~~-------~   49 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE----------------------------VAEAI-------G   49 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH----------------------------HHHHH-------T
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH----------------------------HHHHc-------C
Confidence            899999999999999999999999999999999865331                            11111       2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPVT  125 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~  125 (125)
                      ..++++|++|++++.++++++.+++|+||+||||||+..+.+++
T Consensus        50 ~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~   93 (248)
T d2d1ya1          50 GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSAL   93 (248)
T ss_dssp             CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTT
T ss_pred             CeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChh
Confidence            34679999999999999999999999999999999999887653

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.86  E-value=1.4e-21  Score=135.85  Aligned_cols=91  Identities=24%  Similarity=0.351  Sum_probs=77.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..+                           +..+++..   ...
T Consensus         6 gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~---------------------------~~~~~l~~---~~~   55 (268)
T d2bgka1           6 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQ---------------------------KVCNNIGS---PDV   55 (268)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHCC---TTT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHhcC---CCc
Confidence            899999999999999999999999999999999877552                           22233322   225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....
T Consensus        56 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~   96 (268)
T d2bgka1          56 ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTT   96 (268)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSS
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCC
Confidence            77889999999999999999999999999999999987654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.86  E-value=8.4e-22  Score=136.12  Aligned_cols=91  Identities=22%  Similarity=0.339  Sum_probs=78.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..                               +++....+ .+
T Consensus         6 gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-------------------------------~~~~~~~~-~~   53 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG-------------------------------QQLAAELG-ER   53 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHH-------------------------------HHHHHHHC-TT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHhC-CC
Confidence            79999999999999999999999999999999987655                               22222222 26


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ..++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        54 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~   96 (253)
T d1hxha_          54 SMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDM   96 (253)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCT
T ss_pred             eEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCc
Confidence            7789999999999999999999999999999999999887665

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.6e-21  Score=134.52  Aligned_cols=87  Identities=32%  Similarity=0.473  Sum_probs=76.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+++..                               +.+.....  .
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-------------------------------~~~~~~~~--~   52 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG-------------------------------RALEQELP--G   52 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHCT--T
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHhcC--C
Confidence            89999999999999999999999999999999987655                               33333333  4


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+...
T Consensus        53 ~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~   92 (250)
T d1ydea1          53 AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPP   92 (250)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             CeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEeccccccc
Confidence            6788999999999999999999999999999999997653

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.86  E-value=2.7e-21  Score=134.84  Aligned_cols=94  Identities=31%  Similarity=0.461  Sum_probs=79.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcC-CCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKEN-PDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   80 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+.+..+                           +..+++.... ...
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~---------------------------~~~~~i~~~~~~~~   56 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE---------------------------ETKQQILKAGVPAE   56 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHTTCCGG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHHcCCCCc
Confidence            899999999999999999999999999999999877652                           2223333322 234


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ++.++++|++|++++.++++++.+++|++|+||||||.....
T Consensus        57 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~   98 (274)
T d1xhla_          57 KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLAD   98 (274)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             ceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeeccccccc
Confidence            688999999999999999999999999999999999987554

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.86  E-value=2.4e-21  Score=132.86  Aligned_cols=93  Identities=29%  Similarity=0.476  Sum_probs=79.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCe-------EEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQ-------VIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK   75 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~-------v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (125)
                      +++||||+++|||+++++.|+++|++       |++++|+.+..+                           +..+++..
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~---------------------------~~~~~~~~   54 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLE---------------------------KISLECRA   54 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHH---------------------------HHHHHHHT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHH---------------------------HHHHHHHh
Confidence            67999999999999999999999997       889999877552                           22233332


Q ss_pred             cCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          76 ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        76 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .  +.++.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        55 ~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~  101 (240)
T d2bd0a1          55 E--GALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGAL  101 (240)
T ss_dssp             T--TCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCG
T ss_pred             c--CCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCcc
Confidence            2  3478899999999999999999999999999999999999988765

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=1.9e-21  Score=134.68  Aligned_cols=94  Identities=28%  Similarity=0.447  Sum_probs=76.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+...                           +..+.+...  +.+
T Consensus         8 gK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~---------------------------~~~~~~~~~--~~~   58 (259)
T d1xq1a_           8 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN---------------------------ECLSKWQKK--GFQ   58 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCc
Confidence            899999999999999999999999999999999987652                           222333332  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhc-CCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|+++++++.++++++.+++ |++|+||||||+....++
T Consensus        59 ~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~  102 (259)
T d1xq1a_          59 VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPT  102 (259)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------
T ss_pred             eEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCch
Confidence            8999999999999999999999998 689999999999887765

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.85  E-value=2.4e-21  Score=135.26  Aligned_cols=89  Identities=25%  Similarity=0.446  Sum_probs=77.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+.+                               +++.... +.+
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l-------------------------------~~~~~~~-~~~   52 (276)
T d1bdba_           5 GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERL-------------------------------AELETDH-GDN   52 (276)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHH-GGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHHc-CCC
Confidence            79999999999999999999999999999999987655                               2222222 236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      +..+.+|+++++++.++++++.+++|++|+||||||+....
T Consensus        53 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~   93 (276)
T d1bdba_          53 VLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYS   93 (276)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTT
T ss_pred             eeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCC
Confidence            88999999999999999999999999999999999987654

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.85  E-value=3.7e-21  Score=133.11  Aligned_cols=95  Identities=26%  Similarity=0.419  Sum_probs=78.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++.+++.+...                          ++..+.+.. . +.+
T Consensus         6 GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~--------------------------~~~~~~~~~-~-g~~   57 (259)
T d1ja9a_           6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAA--------------------------EEVVAELKK-L-GAQ   57 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHH-T-TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHH--------------------------HHHHHHHHH-c-CCC
Confidence            899999999999999999999999999998776654321                          111222322 2 237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++++++|++|++++.++++++.+++|++|+||||||.....++
T Consensus        58 ~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~  100 (259)
T d1ja9a_          58 GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDE  100 (259)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCG
T ss_pred             ceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEecccccccccc
Confidence            8899999999999999999999999999999999999887664

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=1.6e-21  Score=133.59  Aligned_cols=84  Identities=35%  Similarity=0.484  Sum_probs=73.4

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +||++||||+++|||+++++.|+++|++|++++|+.+..                                        .
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------------------------------------~   45 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------------------------K   45 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------------------------------T
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------------------------------------c
Confidence            489999999999999999999999999999999986533                                        1


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .+..+++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        46 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~   89 (237)
T d1uzma1          46 GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFL   89 (237)
T ss_dssp             TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC----
T ss_pred             CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccH
Confidence            45678999999999999999999999999999999999887665

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.85  E-value=6e-21  Score=131.17  Aligned_cols=93  Identities=31%  Similarity=0.429  Sum_probs=76.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc-hhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRA-EMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +++||||+++|||++++++|+++|++|++.+++. +..+                           +..+.+...  +.+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~---------------------------~~~~~~~~~--g~~   52 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE---------------------------EVSKQIEAY--GGQ   52 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---------------------------HHHHHHHHH--TCE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHH---------------------------HHHHHHHHc--CCc
Confidence            6899999999999999999999999999876544 3331                           112223222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|+||||||+....++
T Consensus        53 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~   95 (244)
T d1edoa_          53 AITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLL   95 (244)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCG
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccch
Confidence            8899999999999999999999999999999999999887765

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.84  E-value=9.3e-21  Score=132.89  Aligned_cols=95  Identities=24%  Similarity=0.418  Sum_probs=81.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++|||||++|||+++++.|+++|++|++++|+.....                           +..+++....+ .+
T Consensus        25 gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~---------------------------~~~~~l~~~~g-~~   76 (294)
T d1w6ua_          25 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLK---------------------------ATAEQISSQTG-NK   76 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHHS-SC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH---------------------------HHHHHHHHhcC-Cc
Confidence            799999999999999999999999999999999987552                           22234433332 37


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +..+++|+++++++.++++.+.++++++|+||||||.....++
T Consensus        77 ~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~  119 (294)
T d1w6ua_          77 VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPT  119 (294)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCG
T ss_pred             eEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhcccccc
Confidence            8889999999999999999999999999999999999877654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.84  E-value=1.1e-20  Score=130.59  Aligned_cols=95  Identities=23%  Similarity=0.289  Sum_probs=80.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++|+.|+++|++|++++|+.+...                            ...++.....+.+
T Consensus         5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~----------------------------~~~~~~~~~~~~~   56 (254)
T d1sbya1           5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT----------------------------ALAELKAINPKVN   56 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH----------------------------HHHHHHHHCTTSE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHH----------------------------HHHHHHhhCCCCC
Confidence            899999999999999999999999999999988866441                            1233334445558


Q ss_pred             eeEEEecCC-ChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVT-KDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++ +.+++.++++++.+++|+||+||||||...+..+
T Consensus        57 ~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~  100 (254)
T d1sbya1          57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQI  100 (254)
T ss_dssp             EEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCH
T ss_pred             EEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCCCHHHH
Confidence            999999998 6678999999999999999999999998876543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.83  E-value=3.4e-20  Score=128.26  Aligned_cols=95  Identities=27%  Similarity=0.424  Sum_probs=80.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+++.++                           +..+.+...  +..
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~---------------------------~~~~~~~~~--~~~   56 (258)
T d1ae1a_           6 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELD---------------------------ECLEIWREK--GLN   56 (258)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHHhc--CCC
Confidence            899999999999999999999999999999999987652                           222333332  236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhc-CCccEEEeCcccCCCcCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKF-GHIDVMINNAGVNEFAPVT  125 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~lv~nag~~~~~~~~  125 (125)
                      ++++.+|+++++++.++++++.+++ +.+|+||||||.....+++
T Consensus        57 ~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~  101 (258)
T d1ae1a_          57 VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAK  101 (258)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTT
T ss_pred             ceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccc
Confidence            7889999999999999999999998 5799999999999877653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=1.4e-20  Score=129.11  Aligned_cols=86  Identities=30%  Similarity=0.470  Sum_probs=71.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||++++++|+++|++|++++|+.+..                               +++.....  .
T Consensus         5 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l-------------------------------~~~~~~~~--~   51 (242)
T d1cyda_           5 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL-------------------------------VSLAKECP--G   51 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHST--T
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------HHHHHhcC--C
Confidence            89999999999999999999999999999999987654                               22222332  4


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.+++    +++|++|+||||||+....++
T Consensus        52 ~~~~~~Dv~~~~~v~~~~----~~~g~iDilVnnAg~~~~~~~   90 (242)
T d1cyda_          52 IEPVCVDLGDWDATEKAL----GGIGPVDLLVNNAALVIMQPF   90 (242)
T ss_dssp             CEEEECCTTCHHHHHHHH----TTCCCCSEEEECCCCCCCBCG
T ss_pred             CeEEEEeCCCHHHHHHHH----HHcCCCeEEEECCccccchhH
Confidence            667899999999877665    467999999999999887765

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.82  E-value=4.1e-20  Score=128.54  Aligned_cols=95  Identities=28%  Similarity=0.433  Sum_probs=79.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+...                          ++..+.+...  +.+
T Consensus        18 gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~--------------------------~~~~~~~~~~--g~~   69 (272)
T d1g0oa_          18 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESA--------------------------EEVVAAIKKN--GSD   69 (272)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHHT--TCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHH--------------------------HHHHHHHHhh--CCc
Confidence            899999999999999999999999999999998755321                          1112233222  237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++++|++|++++.++++++.+++|++|++|||+|.....++
T Consensus        70 ~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~  112 (272)
T d1g0oa_          70 AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHV  112 (272)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred             eeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhh
Confidence            8899999999999999999999999999999999999887654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.8e-20  Score=127.75  Aligned_cols=86  Identities=30%  Similarity=0.536  Sum_probs=72.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..                               +.+.....  .
T Consensus         7 GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l-------------------------------~~~~~~~~--~   53 (244)
T d1pr9a_           7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL-------------------------------DSLVRECP--G   53 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHHHHHST--T
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHH-------------------------------HHHHHhcC--C
Confidence            89999999999999999999999999999999987655                               22323332  3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +.++.+|++|++++.+++    +++|++|+||||||+....++
T Consensus        54 ~~~~~~Dv~d~~~v~~~~----~~~g~iDilVnnAg~~~~~~~   92 (244)
T d1pr9a_          54 IEPVCVDLGDWEATERAL----GSVGPVDLLVNNAAVALLQPF   92 (244)
T ss_dssp             CEEEECCTTCHHHHHHHH----TTCCCCCEEEECCCCCCCBCG
T ss_pred             CeEEEEeCCCHHHHHHHH----HHhCCceEEEeccccccccch
Confidence            567899999999977665    467999999999999887765

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.82  E-value=4.9e-20  Score=126.69  Aligned_cols=89  Identities=30%  Similarity=0.412  Sum_probs=74.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      ..|++|||||++|||++++++|+++|+  +|++.+|+.+..                               +++.+.. 
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~-------------------------------~~l~~~~-   49 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA-------------------------------TELKSIK-   49 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC-------------------------------HHHHTCC-
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH-------------------------------HHHHHhh-
Confidence            049999999999999999999999996  688889987655                               3333333 


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCC--ccEEEeCcccCCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGH--IDVMINNAGVNEF  121 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~--id~lv~nag~~~~  121 (125)
                      +.++.++++|++|++++.++++++.+.++.  +|+||||||+...
T Consensus        50 ~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~   94 (250)
T d1yo6a1          50 DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLS   94 (250)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCC
T ss_pred             CCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCC
Confidence            337889999999999999999999998764  9999999998754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.82  E-value=5.7e-20  Score=126.23  Aligned_cols=91  Identities=23%  Similarity=0.360  Sum_probs=74.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHH---HcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALA---AKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~---~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      ||++||||+++|||+++++.|+   ++|++|++++|+.+..+.                            ++++.... 
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~----------------------------~~~~~~~~-   52 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE----------------------------LEDLAKNH-   52 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH----------------------------HHHHHHHC-
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH----------------------------HHHHHhcC-
Confidence            4999999999999999999996   479999999999876521                            12332222 


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHh--hcCCccEEEeCcccCCCc
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINN--KFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~g~id~lv~nag~~~~~  122 (125)
                       .++.++++|++|++++.++++.+.+  +++++|+||||||+....
T Consensus        53 -~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~   97 (248)
T d1snya_          53 -SNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS   97 (248)
T ss_dssp             -TTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCC
T ss_pred             -CcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccC
Confidence             2788999999999999999999854  678999999999987653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=1.4e-19  Score=125.02  Aligned_cols=93  Identities=27%  Similarity=0.317  Sum_probs=78.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH---cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA---KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP   78 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (125)
                      ||++||||+++|||++++++|++   +|++|++++|+.+.+                           ++..+++.....
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l---------------------------~~~~~~l~~~~~   58 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESML---------------------------RQLKEELGAQQP   58 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHH---------------------------HHHHHHHHHHCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHH---------------------------HHHHHHHHhhcC
Confidence            89999999999999999999986   799999999998766                           233345544555


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhh----cCCccEEEeCcccCCC
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNK----FGHIDVMINNAGVNEF  121 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~----~g~id~lv~nag~~~~  121 (125)
                      +.++.+++||+++++++.++++.+.+.    ++.+|++|||||...+
T Consensus        59 ~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~  105 (259)
T d1oaaa_          59 DLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGD  105 (259)
T ss_dssp             TSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCC
T ss_pred             CceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEeccccccc
Confidence            568999999999999999999988763    4678999999998764

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.81  E-value=3.1e-20  Score=131.08  Aligned_cols=100  Identities=22%  Similarity=0.289  Sum_probs=76.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++.+++.+...                      ..+.....+.+...... .
T Consensus         7 gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~----------------------~~~~~~~~~~~~~~~~~-~   63 (302)
T d1gz6a_           7 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKG----------------------VGKGSSAADKVVEEIRR-R   63 (302)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTS----------------------CBCCSHHHHHHHHHHHH-T
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhh----------------------hhhhHHHHHHHHHHHhh-c
Confidence            899999999999999999999999999999988754320                      00111111222111111 2


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      .....+|++|.+++.++++.+.+++|+||+||||||+....++
T Consensus        64 ~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~  106 (302)
T d1gz6a_          64 GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSF  106 (302)
T ss_dssp             TCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCG
T ss_pred             ccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCh
Confidence            3456789999999999999999999999999999999988765

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.80  E-value=2.4e-19  Score=123.47  Aligned_cols=89  Identities=21%  Similarity=0.289  Sum_probs=74.0

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||++||||+++  |||++++++|+++|++|++.+|+++....                            ......... 
T Consensus         8 gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~----------------------------~~~~~~~~~-   58 (256)
T d1ulua_           8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE----------------------------AEKLAEALG-   58 (256)
T ss_dssp             TCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH----------------------------HHHHHHHTT-
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH----------------------------HHHhhhccC-
Confidence            89999999986  99999999999999999999998654311                            122222222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                       ...++++|++|++++.++++.+.+++|++|+||||||+..
T Consensus        59 -~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~   98 (256)
T d1ulua_          59 -GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAP   98 (256)
T ss_dssp             -CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCC
T ss_pred             -cccccccccCCHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence             4667899999999999999999999999999999999865

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.6e-18  Score=120.31  Aligned_cols=95  Identities=23%  Similarity=0.260  Sum_probs=81.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++|||||++|||+++|++|+++|++|++++|+.+.++                           +..++..... +..
T Consensus        14 GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~---------------------------~~~~~~~~~~-~~~   65 (269)
T d1xu9a_          14 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQ---------------------------KVVSHCLELG-AAS   65 (269)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---------------------------HHHHHHHHHT-CSE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---------------------------HHHHHHhhhh-ccc
Confidence            899999999999999999999999999999999987662                           2223333233 337


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +..+.+|+.+.+.+...++.+...+|.+|+++||||.....++
T Consensus        66 ~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~  108 (269)
T d1xu9a_          66 AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNL  108 (269)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCC
T ss_pred             chhhhhhhhhHHHHHHHHHHHHHHhCCcccccccccccccccc
Confidence            8889999999999999999999999999999999999877654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.78  E-value=7.6e-19  Score=122.02  Aligned_cols=96  Identities=23%  Similarity=0.247  Sum_probs=72.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCC----
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENP----   78 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   78 (125)
                      .++||||+++|||+++++.|+++|++|++.+++.+...                          ++..+.+....+    
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~--------------------------~~~~~~l~~~~~~~~~   56 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEA--------------------------NALSATLNARRPNSAI   56 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHHHSTTCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHH--------------------------HHHHHHHHhhcCCceE
Confidence            68999999999999999999999999999888654321                          111122211111    


Q ss_pred             ------------CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          79 ------------DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        79 ------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                                  ...+..+.+|+++++++.++++++.+++|++|+||||||+..+.++
T Consensus        57 ~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~  114 (284)
T d1e7wa_          57 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL  114 (284)
T ss_dssp             EEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCC
T ss_pred             EEEeecccccccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCch
Confidence                        1134456778999999999999999999999999999999887654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.75  E-value=8.2e-18  Score=115.65  Aligned_cols=95  Identities=23%  Similarity=0.293  Sum_probs=73.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .|+||||+++|||+++++.|+++|++|++++|+.+...                          ++..+++...... +.
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~--------------------------~~~~~~~~~~~~~-~~   54 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAA--------------------------QRLVAELNAARAG-SA   54 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH--------------------------HHHHHHHHHHSTT-CE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH--------------------------HHHHHHHHhhcCC-ce
Confidence            48999999999999999999999999999999876431                          1222444443333 56


Q ss_pred             eEEEecCC----ChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          83 HSLKVDVT----KDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        83 ~~~~~Dv~----~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ..+++|+.    .++.+.++++.+.+++|++|+||||||+..+.++
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~  100 (266)
T d1mxha_          55 VLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPL  100 (266)
T ss_dssp             EEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCS
T ss_pred             EEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcc
Confidence            66666554    3567888889999999999999999999876543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.74  E-value=3.4e-19  Score=122.75  Aligned_cols=86  Identities=20%  Similarity=0.251  Sum_probs=70.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      ++||||+++|||+++|+.|+++|++|++++|+.+..++.                            +....       .
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~----------------------------~~~~~-------~   46 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL----------------------------EAFAE-------T   46 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH----------------------------HHHHH-------H
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----------------------------HhhhC-------c
Confidence            799999999999999999999999999999987655211                            11111       1


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC-cCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF-APV  124 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~-~~~  124 (125)
                      +.++|+++++++.++++++.+++|+||+||||||+... .|+
T Consensus        47 ~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~   88 (252)
T d1zmta1          47 YPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPI   88 (252)
T ss_dssp             CTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCG
T ss_pred             EEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCCh
Confidence            24689999999999999999999999999999998653 444

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.72  E-value=1.2e-17  Score=113.83  Aligned_cols=79  Identities=29%  Similarity=0.395  Sum_probs=64.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+.+..                               +..       .
T Consensus         4 gK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l-------------------------------~~~-------~   45 (234)
T d1o5ia_           4 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL-------------------------------KRS-------G   45 (234)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------HHT-------C
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-------------------------------Hhc-------C
Confidence            89999999999999999999999999999999986543                               111       1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ..++.+|+++.      ++.+.+++|++|+||||||+....++
T Consensus        46 ~~~~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~~~~~~   82 (234)
T d1o5ia_          46 HRYVVCDLRKD------LDLLFEKVKEVDILVLNAGGPKAGFF   82 (234)
T ss_dssp             SEEEECCTTTC------HHHHHHHSCCCSEEEECCCCCCCBCG
T ss_pred             CcEEEcchHHH------HHHHHHHhCCCcEEEecccccCCcch
Confidence            23578999864      45566788999999999998877654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.72  E-value=3e-17  Score=113.51  Aligned_cols=90  Identities=13%  Similarity=0.219  Sum_probs=75.0

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||++||||+++  |||+++|+.|+++|++|++++|++...                            +..+++..... 
T Consensus         5 gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~----------------------------~~~~~l~~~~~-   55 (274)
T d2pd4a1           5 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE----------------------------KRVRPIAQELN-   55 (274)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTH----------------------------HHHHHHHHHTT-
T ss_pred             CCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----------------------------HHHHHHHhhCC-
Confidence            89999999764  999999999999999999999985432                            22233333332 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       ...++.+|+++++++.++++++.+++|++|++|||+|+...
T Consensus        56 -~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~   96 (274)
T d2pd4a1          56 -SPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPK   96 (274)
T ss_dssp             -CCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCG
T ss_pred             -ceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccc
Confidence             45678999999999999999999999999999999998765

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.71  E-value=3.6e-17  Score=112.45  Aligned_cols=96  Identities=23%  Similarity=0.301  Sum_probs=76.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      ++++||||+++|||+++++.|+++|+ +|++++|+....+..                        .+..+++...  +.
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~------------------------~~~~~~l~~~--g~   62 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGA------------------------GELVAELEAL--GA   62 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTH------------------------HHHHHHHHHT--TC
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHH------------------------HHHHHHHHhc--cc
Confidence            57999999999999999999999999 688899985433211                        2223444332  34


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      ++.++.||++|++++.++++.+.+. +++|++|||+|+....++
T Consensus        63 ~v~~~~~Dv~d~~~~~~~~~~i~~~-~~i~~vv~~ag~~~~~~~  105 (259)
T d2fr1a1          63 RTTVAACDVTDRESVRELLGGIGDD-VPLSAVFHAAATLDDGTV  105 (259)
T ss_dssp             EEEEEECCTTCHHHHHHHHHTSCTT-SCEEEEEECCCCCCCCCG
T ss_pred             cccccccccchHHHHHHhhcccccc-cccccccccccccccccc
Confidence            8999999999999999999987654 689999999999987764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.6e-17  Score=115.08  Aligned_cols=98  Identities=27%  Similarity=0.418  Sum_probs=71.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|++|||||++|||+++|+.|+++|++++.+.+..........+                     .+..+.+.  ..+.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l---------------------~~~~~~~~--~~~~~   58 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRL---------------------WEAARALA--CPPGS   58 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHH---------------------HHHHHHTT--CCTTS
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHH---------------------HHHHHHHh--ccCCc
Confidence            37899999999999999999999999876665543221100000                     11112221  23447


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +..+.+|++|++++.++++++.+  |++|+||||+|+....++
T Consensus        59 ~~~~~~Dv~~~~~~~~~~~~~~~--g~idilvnnag~~~~~~~   99 (285)
T d1jtva_          59 LETLQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGPL   99 (285)
T ss_dssp             EEEEECCTTCHHHHHHHHHTCTT--SCCSEEEECCCCCCCSCG
T ss_pred             eEEEeccccchHhhhhhhhhccc--cchhhhhhcccccccccc
Confidence            99999999999999999988643  899999999999887654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.2e-16  Score=109.47  Aligned_cols=85  Identities=29%  Similarity=0.423  Sum_probs=68.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++|+++..                               +++.+..   .
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l-------------------------------~~~~~~~---~   51 (245)
T d2ag5a1           6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-------------------------------QELEKYP---G   51 (245)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------------------------------GGGGGST---T
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-------------------------------HHHHhcc---C
Confidence            79999999999999999999999999999999987654                               2332222   4


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAPV  124 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~  124 (125)
                      +....+|+.+.+.+.    .....++++|+||||+|.....++
T Consensus        52 ~~~~~~d~~~~~~~~----~~~~~~~~id~lVn~ag~~~~~~~   90 (245)
T d2ag5a1          52 IQTRVLDVTKKKQID----QFANEVERLDVLFNVAGFVHHGTV   90 (245)
T ss_dssp             EEEEECCTTCHHHHH----HHHHHCSCCSEEEECCCCCCCBCG
T ss_pred             Cceeeeecccccccc----ccccccccceeEEecccccCCCCh
Confidence            567788988776544    445567899999999999888764

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.67  E-value=2.5e-16  Score=108.38  Aligned_cols=89  Identities=19%  Similarity=0.246  Sum_probs=72.6

Q ss_pred             CcEEEEecC--CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGA--SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||++||||+  ++|||+++|+.|+++|++|++++|+....                              .+.+.+..+ 
T Consensus         6 gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~------------------------------~~~~~~~~~-   54 (268)
T d2h7ma1           6 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL------------------------------IQRITDRLP-   54 (268)
T ss_dssp             TCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHH------------------------------HHHHHTTSS-
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHH------------------------------HHHHHHHcC-
Confidence            899999994  57999999999999999999999987643                              133333333 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhh---cCCccEEEeCcccCCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNK---FGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~---~g~id~lv~nag~~~~  121 (125)
                      .+...+++|+++++++..+++.+.+.   ++.+|+++||+|+...
T Consensus        55 ~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~   99 (268)
T d2h7ma1          55 AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQ   99 (268)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCG
T ss_pred             CceeeEeeecccccccccccchhhhccccCCCcceeeecccccCc
Confidence            36778899999999999999998765   4679999999997643

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.64  E-value=2.6e-16  Score=104.03  Aligned_cols=82  Identities=22%  Similarity=0.252  Sum_probs=64.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||+++|||+++|||+++++.|+++|++|++++|+.+.....                           .+.+....   .
T Consensus        23 gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~---------------------------~~~~~~~~---~   72 (191)
T d1luaa1          23 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAA---------------------------ADSVNKRF---K   72 (191)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------------------------HHHHHHHH---T
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHH---------------------------HHHHHhcc---c
Confidence            89999999999999999999999999999999998765221                           12222211   3


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +....+|+++.+++.+++       +++|+||||||+..
T Consensus        73 ~~~~~~d~~~~~~~~~~~-------~~iDilin~Ag~g~  104 (191)
T d1luaa1          73 VNVTAAETADDASRAEAV-------KGAHFVFTAGAIGL  104 (191)
T ss_dssp             CCCEEEECCSHHHHHHHT-------TTCSEEEECCCTTC
T ss_pred             hhhhhhhcccHHHHHHHh-------cCcCeeeecCcccc
Confidence            446789999999887765       47999999999753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.6e-15  Score=103.50  Aligned_cols=89  Identities=24%  Similarity=0.336  Sum_probs=75.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++|||||++|||++++++|+++|++|++++|+.+..+                           +..+++    . ..
T Consensus         5 GKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~---------------------------~~~~~l----~-~~   52 (248)
T d2o23a1           5 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE---------------------------AQAKKL----G-NN   52 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH---------------------------HHHHHH----C-TT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH---------------------------HHHHHh----C-CC
Confidence            899999999999999999999999999999999987552                           112222    2 25


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                      ...+.+|+.+.+.+...++.+...++.+|.+++|+++....
T Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (248)
T d2o23a1          53 CVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVAS   93 (248)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             cccccccccccccccccccccccccccccccccccccccCC
Confidence            67889999999999999999999999999999998877654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=2e-15  Score=103.40  Aligned_cols=91  Identities=20%  Similarity=0.264  Sum_probs=75.2

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||++|||||++  |||+++|+.|+++|++|++.+|++....                            ..++...... 
T Consensus         5 gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~----------------------------~~~~~~~~~~-   55 (258)
T d1qsga_           5 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG----------------------------RVEEFAAQLG-   55 (258)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH----------------------------HHHHHHHHTT-
T ss_pred             CCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH----------------------------HHHHHHhhcC-
Confidence            89999999998  8999999999999999999999865331                            1122222222 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCc
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFA  122 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~  122 (125)
                       +...+.+|+.+..++...++.+...++++|++|||++.....
T Consensus        56 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~   97 (258)
T d1qsga_          56 -SDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGD   97 (258)
T ss_dssp             -CCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGG
T ss_pred             -CcceeecccchHHHHHHHHHHhhhcccccceEEEeecccccc
Confidence             566789999999999999999999999999999999987654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.58  E-value=3.9e-15  Score=101.03  Aligned_cols=80  Identities=15%  Similarity=0.085  Sum_probs=63.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++||||+++|||+++++.|+++|++|++++|+....                                       ....
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~---------------------------------------~~~~   43 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ---------------------------------------ADSN   43 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT---------------------------------------SSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc---------------------------------------cccc
Confidence            4569999999999999999999999999999986422                                       0123


Q ss_pred             eEEEecCCChHHHHHHHHHHHh--hcCCccEEEeCcccCCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINN--KFGHIDVMINNAGVNEF  121 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~--~~g~id~lv~nag~~~~  121 (125)
                      ..+.+|+.+.+......+.+..  ++++||+||||||+...
T Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~   84 (235)
T d1ooea_          44 ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAG   84 (235)
T ss_dssp             EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred             ceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCccccc
Confidence            3456788877777777777666  46899999999998654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.58  E-value=4.7e-15  Score=100.75  Aligned_cols=81  Identities=12%  Similarity=0.095  Sum_probs=66.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||+++|||+++++.|+++|++|++++++....                                       ...
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~---------------------------------------~~~   42 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE---------------------------------------ASA   42 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------------------------------------SSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------------------------------ccc
Confidence            79999999999999999999999999999998865422                                       113


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhc--CCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKF--GHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~--g~id~lv~nag~~~~  121 (125)
                      .....+|..+.++...+.+.+.+.+  +++|+||||||....
T Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~   84 (236)
T d1dhra_          43 SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAG   84 (236)
T ss_dssp             EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred             cceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCccccc
Confidence            4456778888888888888887764  479999999997543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.57  E-value=4.6e-15  Score=103.30  Aligned_cols=104  Identities=21%  Similarity=0.200  Sum_probs=65.7

Q ss_pred             CcEEEEecCCc--chHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASV--GIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ||++||||+++  |||+++++.|+++|++|++.+|+.............      ...         .............
T Consensus         8 gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~------~~~---------~~~~~~~~~~~~~   72 (297)
T d1d7oa_           8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRG------KFD---------QSRVLPDGSLMEI   72 (297)
T ss_dssp             TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTT------TTT---------GGGBCTTSSBCCE
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHh------hhh---------hhhhhhhhhhhhh
Confidence            89999999875  999999999999999999999976533211111100      000         0000000000000


Q ss_pred             ceeeEEE------------------ecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLK------------------VDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~------------------~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++..+.                  +|.++...+.++++.+.+++|+||+||||||...
T Consensus        73 ~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~  131 (297)
T d1d7oa_          73 KKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGP  131 (297)
T ss_dssp             EEEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCT
T ss_pred             hhhhhhhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCccccccccccc
Confidence            0111111                  1235666778999999999999999999999864

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.53  E-value=2.7e-14  Score=97.40  Aligned_cols=74  Identities=30%  Similarity=0.421  Sum_probs=61.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||++++++|+++|++|++++|+...                                           
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------------------------------   37 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------------------------------   37 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------------------------------
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------------------------------
Confidence            3999999999999999999999999999999987531                                           


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhh-cCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNK-FGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~-~g~id~lv~nag~~~~  121 (125)
                         ...|+.+.+.......+...+ .+.+|++|||||+...
T Consensus        38 ---~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~   75 (257)
T d1fjha_          38 ---VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ   75 (257)
T ss_dssp             ---EECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT
T ss_pred             ---HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCc
Confidence               245888888888777666655 4579999999998654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.51  E-value=3.8e-14  Score=100.47  Aligned_cols=103  Identities=16%  Similarity=0.201  Sum_probs=68.5

Q ss_pred             CcEEEEec--CCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTG--ASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG--~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++||||  +++|||+++++.|+++|++|++.+++.................               ........... 
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~-   65 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDN---------------DMIIDKDKKMN-   65 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTG---------------GGEETTTEECC-
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhh---------------HHHHHHHhhhh-
Confidence            68999999  5589999999999999999999998765432111111000000               00000000000 


Q ss_pred             ceeeE--------------------EEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          80 WKVHS--------------------LKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        80 ~~~~~--------------------~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                       ....                    ..+|+++.+++.++++.+.+.+|+||+||||+|....
T Consensus        66 -~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~  126 (329)
T d1uh5a_          66 -ILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE  126 (329)
T ss_dssp             -EEEEEECCTTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTT
T ss_pred             -hhhcccccceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccc
Confidence             1111                    2347788999999999999999999999999997653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=4e-13  Score=88.97  Aligned_cols=78  Identities=22%  Similarity=0.216  Sum_probs=64.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|+++||||+|+||.+++++|+++|++|.++.|++++.+                               .    .....
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~-------------------------------~----~~~~~   47 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-------------------------------S----EGPRP   47 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC-------------------------------S----SSCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcc-------------------------------c----ccccc
Confidence            688999999999999999999999999999999876441                               1    11225


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      +.++.+|++|.+++.++++       ..|++|+++|....
T Consensus        48 ~~~~~gD~~d~~~l~~al~-------~~d~vi~~~g~~~~   80 (205)
T d1hdoa_          48 AHVVVGDVLQAADVDKTVA-------GQDAVIVLLGTRND   80 (205)
T ss_dssp             SEEEESCTTSHHHHHHHHT-------TCSEEEECCCCTTC
T ss_pred             cccccccccchhhHHHHhc-------CCCEEEEEeccCCc
Confidence            6789999999999888876       68999999987543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.39  E-value=1.1e-12  Score=88.32  Aligned_cols=76  Identities=28%  Similarity=0.347  Sum_probs=62.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++||||+++|||+++++.|+++|++|++++|+.+..                                         +
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-----------------------------------------~   39 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-----------------------------------------D   39 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-----------------------------------------S
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-----------------------------------------c
Confidence            58999999999999999999999999999999976422                                         4


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ...+++|+++......+.......... +.+++++++.
T Consensus        40 ~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   76 (241)
T d1uaya_          40 LIYVEGDVTREEDVRRAVARAQEEAPL-FAVVSAAGVG   76 (241)
T ss_dssp             SEEEECCTTCHHHHHHHHHHHHHHSCE-EEEEECCCCC
T ss_pred             ceEeeccccchhhhHHHHHhhhccccc-cchhhhhhcc
Confidence            566889999999999998887776544 4455555544

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=2.7e-12  Score=91.25  Aligned_cols=90  Identities=21%  Similarity=0.259  Sum_probs=63.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|++|||||+|.||..++++|+++|++|++++|.......                      .+.+...+..  .....+
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~----------------------~~~~~~~~~~--~~~~~~   56 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNT----------------------ERVDHIYQDP--HTCNPK   56 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------------------------------CC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccch----------------------hhHHHHHhhh--hhcCCC
Confidence            4899999999999999999999999999999996532200                      0000000111  112236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++++|++|.+++.++++..     .+|+++|+|+...
T Consensus        57 ~~~~~~Dl~d~~~~~~~~~~~-----~~d~v~h~aa~~~   90 (357)
T d1db3a_          57 FHLHYGDLSDTSNLTRILREV-----QPDEVYNLGAMSH   90 (357)
T ss_dssp             EEECCCCSSCHHHHHHHHHHH-----CCSEEEECCCCCT
T ss_pred             eEEEEeecCCHHHHHHHHhcc-----CCCEEEEeecccc
Confidence            888999999999999999874     6899999999865

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.33  E-value=3.7e-12  Score=89.26  Aligned_cols=90  Identities=22%  Similarity=0.207  Sum_probs=64.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |++|||||+|.||.++++.|+++|++|++++|..+....                      .......... .......+
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~----------------------~~~~~~~~~~-~~~~~~~~   58 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNT----------------------QRINHIYIDP-HNVNKALM   58 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC----------------------TTTTTTC---------CCE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccch----------------------hhhhhhhhhh-hhccccce
Confidence            799999999999999999999999999999996432100                      0000000111 11123367


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+..+|+++.+.+.+.++..     ++|+++|+|+...
T Consensus        59 ~~~~~Di~~~~~~~~~~~~~-----~~D~Vih~Aa~~~   91 (339)
T d1n7ha_          59 KLHYADLTDASSLRRWIDVI-----KPDEVYNLAAQSH   91 (339)
T ss_dssp             EEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             EEEEccccCHHHHHHHHhhh-----ccchhhhcccccc
Confidence            88899999999999988863     7999999999754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.33  E-value=3.8e-12  Score=89.69  Aligned_cols=84  Identities=23%  Similarity=0.260  Sum_probs=63.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      .+|||||+|.||..++++|+++|++|++++|......                           ......... ...++.
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~---------------------------~~~~~~~~~-~~~~~~   53 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR---------------------------SVLPVIERL-GGKHPT   53 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCT---------------------------THHHHHHHH-HTSCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcch---------------------------hhHHHHHhh-cCCCCE
Confidence            3999999999999999999999999999987443210                           001111111 122678


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++++|++|.+.+.++++.     .++|+|||+|+...
T Consensus        54 ~~~~Dl~d~~~l~~~~~~-----~~~d~ViHlAa~~~   85 (338)
T d1udca_          54 FVEGDIRNEALMTEILHD-----HAIDTVIHFAGLKA   85 (338)
T ss_dssp             EEECCTTCHHHHHHHHHH-----TTCSEEEECCSCCC
T ss_pred             EEEeecCCHHHHHHHHhc-----cCCCEEEECCCccc
Confidence            899999999999999886     36999999999754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.32  E-value=1.2e-11  Score=88.48  Aligned_cols=102  Identities=13%  Similarity=0.023  Sum_probs=66.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |+++||||++|.||.+++++|++.|++|+++++......         ....  ...................... +.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~   68 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLF---------DHQL--GLESLTPIASIHDRISRWKALT-GKS   68 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHH---------HHHH--TCCCSSCCCCHHHHHHHHHHHH-CCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccc---------cccc--cccccccccchHHHHHHHHhhc-CCC
Confidence            688999999999999999999999999999975321110         0000  0000011111122222222221 226


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|.+.+.++++..     ++|+|+|.|+...
T Consensus        69 i~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~  102 (393)
T d1i24a_          69 IELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRS  102 (393)
T ss_dssp             CEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             cEEEEccCCCHHHHHHHHHhh-----cchheeccccccc
Confidence            889999999999999999864     7999999998754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.31  E-value=5.3e-12  Score=89.14  Aligned_cols=86  Identities=21%  Similarity=0.273  Sum_probs=64.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|++|||||+|.||..++++|+++|++|+++++........                        ........    ...
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~------------------------~~~~~~~~----~~~   52 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDS------------------------VARLEVLT----KHH   52 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHH------------------------HHHHHHHH----TSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhH------------------------HHhHHhhc----ccC
Confidence            38899999999999999999999999999998643321000                        00011111    126


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|.+.+..+++.     -++|++||+|+...
T Consensus        53 v~~~~~Dl~d~~~l~~~~~~-----~~~d~VihlAa~~~   86 (347)
T d1z45a2          53 IPFYEVDLCDRKGLEKVFKE-----YKIDSVIHFAGLKA   86 (347)
T ss_dssp             CCEEECCTTCHHHHHHHHHH-----SCCCEEEECCSCCC
T ss_pred             CeEEEeecCCHHHHHHHHhc-----cCCCEEEEcccccc
Confidence            77889999999999998875     37999999999764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.29  E-value=1.1e-11  Score=87.26  Aligned_cols=84  Identities=17%  Similarity=0.177  Sum_probs=66.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|++|||||+|.||..+++.|+++|++|++++|+.....                           ...+..   .....
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~---------------------------~~~~~~---~~~~~   57 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVP---------------------------SLFETA---RVADG   57 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSS---------------------------CHHHHT---TTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccH---------------------------HHHhhh---hcccC
Confidence            789999999999999999999999999999999865431                           111111   11125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|++.+.++++..     .+|+++|.|+...
T Consensus        58 i~~~~~Dl~d~~~l~~~~~~~-----~~~~v~~~aa~~~   91 (356)
T d1rkxa_          58 MQSEIGDIRDQNKLLESIREF-----QPEIVFHMAAQPL   91 (356)
T ss_dssp             SEEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             CeEEEeeccChHhhhhhhhhc-----hhhhhhhhhcccc
Confidence            788999999999999988863     7899999998754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.27  E-value=1.6e-11  Score=85.53  Aligned_cols=83  Identities=13%  Similarity=0.133  Sum_probs=63.6

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      .+|||||+|.||.+++++|+++|++|+++++-.....                          ...+..+..   ..++.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~--------------------------~~~~~~~~~---~~~~~   52 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--------------------------TDNLHWLSS---LGNFE   52 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--------------------------HHHHHHHHT---TCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc--------------------------hhHHHHhhc---cCCcE
Confidence            5899999999999999999999999999876332110                          111122222   12678


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.+|++|.+.+.++++..     ++|++||+|+...
T Consensus        53 ~i~~Di~~~~~l~~~~~~~-----~~d~Vih~aa~~~   84 (338)
T d1orra_          53 FVHGDIRNKNDVTRLITKY-----MPDSCFHLAGQVA   84 (338)
T ss_dssp             EEECCTTCHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             EEEcccCCHHHHHHHHHhc-----CCceEEeeccccc
Confidence            8999999999999998864     6899999998765

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=3.9e-11  Score=84.47  Aligned_cols=93  Identities=16%  Similarity=0.160  Sum_probs=65.9

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      |.|++|||||+|.||.+++++|+++|+.|++++|......                  .   ........+..... ...
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~------------------~---~~~~~~~~~~~~~~-~~~   58 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFR------------------G---GGSLPESLRRVQEL-TGR   58 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCB------------------C---SSSSBHHHHHHHHH-HTC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc------------------c---cccchHHHHHHHHh-cCC
Confidence            7889999999999999999999999999999976322110                  0   00000111111111 123


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ++.++.+|++|.+.+.+++..     ..+++++|.|+...
T Consensus        59 ~~~~~~~Dl~d~~~l~~~~~~-----~~~~~i~h~Aa~~~   93 (346)
T d1ek6a_          59 SVEFEEMDILDQGALQRLFKK-----YSFMAVIHFAGLKA   93 (346)
T ss_dssp             CCEEEECCTTCHHHHHHHHHH-----CCEEEEEECCSCCC
T ss_pred             CcEEEEeeccccccccccccc-----cccccccccccccC
Confidence            678999999999999998876     46888999999764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.22  E-value=2.1e-11  Score=80.73  Aligned_cols=76  Identities=21%  Similarity=0.277  Sum_probs=59.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe--EEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ--VIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      ++++|||||+|+||+++++.|+++|+.  |+.+.|+++..                               ..+    . 
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~-------------------------------~~~----~-   46 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-------------------------------EKI----G-   46 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH-------------------------------HHT----T-
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH-------------------------------Hhc----c-
Confidence            389999999999999999999999975  55566665432                               111    1 


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..+..+.+|+.+.+.+.++++       .+|.+||+++...
T Consensus        47 ~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~a~~~~   80 (252)
T d2q46a1          47 GEADVFIGDITDADSINPAFQ-------GIDALVILTSAVP   80 (252)
T ss_dssp             CCTTEEECCTTSHHHHHHHHT-------TCSEEEECCCCCC
T ss_pred             CCcEEEEeeeccccccccccc-------cceeeEEEEeecc
Confidence            156788999999999888776       6899999998765

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.20  E-value=5.5e-11  Score=82.62  Aligned_cols=84  Identities=19%  Similarity=0.111  Sum_probs=64.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |++||||++|.||+.++++|+++|++|++++|......                          .   ..+.......++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--------------------------~---~~l~~~~~~~~~   51 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--------------------------R---WRLRELGIEGDI   51 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--------------------------C---HHHHHTTCGGGE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--------------------------H---HHHHHhcccCCc
Confidence            68999999999999999999999999999999754220                          0   112112222368


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|.+.+.+.+...     ..++++++++...
T Consensus        52 ~~~~~Dl~d~~~~~~~~~~~-----~~~~~~~~a~~~~   84 (321)
T d1rpna_          52 QYEDGDMADACSVQRAVIKA-----QPQEVYNLAAQSF   84 (321)
T ss_dssp             EEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             EEEEccccChHHhhhhhccc-----ccccccccccccc
Confidence            89999999999999888874     5778888876543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.18  E-value=7.3e-11  Score=83.97  Aligned_cols=83  Identities=16%  Similarity=0.249  Sum_probs=60.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEE-eecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIG-FARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .+|||||+|.||.++++.|++.|+.+++ +++.....                             ....+.......++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~-----------------------------~~~~~~~~~~~~~~   52 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-----------------------------NLESLSDISESNRY   52 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-----------------------------CGGGGTTTTTCTTE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc-----------------------------cHHHHHhhhhcCCc
Confidence            4799999999999999999999997544 54432111                             00111112223368


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|.+.+.++++..     ++|.+||+|+...
T Consensus        53 ~~~~~Dl~d~~~l~~~~~~~-----~~d~VihlAa~~~   85 (361)
T d1kewa_          53 NFEHADICDSAEITRIFEQY-----QPDAVMHLAAESH   85 (361)
T ss_dssp             EEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             EEEEccCCCHHHHHHHHHhC-----CCCEEEECccccc
Confidence            89999999999999988863     7999999999754

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=9.5e-11  Score=82.22  Aligned_cols=90  Identities=17%  Similarity=0.204  Sum_probs=62.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |+||||||+|.||.+++++|+++|++|++++|..+....                      ...+....... ......+
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~----------------------~~~~~~~~~~~-~~~~~~~   58 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT----------------------GRIEHLYKNPQ-AHIEGNM   58 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC----------------------TTTGGGC----------CE
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccch----------------------hhHHHHhhchh-hhccCCc
Confidence            556999999999999999999999999999996542200                      00000001111 1112368


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|++|++.+.++++..     .++.+++.++...
T Consensus        59 ~~~~~Dl~d~~~~~~~~~~~-----~~~~v~~~~a~~~   91 (347)
T d1t2aa_          59 KLHYGDLTDSTCLVKIINEV-----KPTEIYNLGAQSH   91 (347)
T ss_dssp             EEEECCTTCHHHHHHHHHHH-----CCSEEEECCSCCC
T ss_pred             EEEEeecCCchhhHHHHhhc-----ccceeeeeeeccc
Confidence            89999999999999999874     6788888887654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.13  E-value=5.1e-11  Score=83.98  Aligned_cols=86  Identities=21%  Similarity=0.222  Sum_probs=62.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ||++||||++|.||..++++|+++|++|+++.|+.+.....                           .+..........
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~---------------------------~~~~~~~~~~~~   63 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL---------------------------QKRWDAKYPGRF   63 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---------------------------HHHHHHHSTTTE
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHH---------------------------HHhhhccccccc
Confidence            79999999999999999999999999999999986543111                           011111122224


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ...+..|++|.+.+.+++.       .+|.++|+++....
T Consensus        64 ~~~~~~Dl~~~~~~~~~~~-------~~~~v~~~a~~~~~   96 (342)
T d1y1pa1          64 ETAVVEDMLKQGAYDEVIK-------GAAGVAHIASVVSF   96 (342)
T ss_dssp             EEEECSCTTSTTTTTTTTT-------TCSEEEECCCCCSC
T ss_pred             cEEEeccccchhhhhhhcc-------cchhhhhhcccccc
Confidence            4556789999987766654       68999999887653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.12  E-value=2e-10  Score=80.58  Aligned_cols=77  Identities=17%  Similarity=0.216  Sum_probs=59.2

Q ss_pred             EEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      ++|||||+|.||..++++|+++| +.|+++++.....                               ..+.   ...++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~-------------------------------~~~~---~~~~~   47 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-------------------------------SRFL---NHPHF   47 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG-------------------------------GGGT---TCTTE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcch-------------------------------hhhc---cCCCe
Confidence            48999999999999999999998 5899988764432                               1111   12368


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .++.+|+++.+.+.+.+..      .+|+++|+|+...
T Consensus        48 ~~i~~Di~~~~~~~~~~~~------~~d~Vih~a~~~~   79 (342)
T d2blla1          48 HFVEGDISIHSEWIEYHVK------KCDVVLPLVAIAT   79 (342)
T ss_dssp             EEEECCTTTCSHHHHHHHH------HCSEEEECBCCCC
T ss_pred             EEEECccCChHHHHHHHHh------CCCcccccccccc
Confidence            8999999998776654432      5999999999865

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.02  E-value=4.9e-10  Score=78.80  Aligned_cols=84  Identities=17%  Similarity=0.084  Sum_probs=59.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      +|.+|||||+|.||..++++|++.|+.|.+++++....                        ....   ..+. .....+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~------------------------~~~~---~~~~-~~~~~~   53 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY------------------------AGNK---ANLE-AILGDR   53 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT------------------------TCCG---GGTG-GGCSSS
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCc------------------------cccH---HHHH-HhhcCC
Confidence            37899999999999999999999998766655532110                        0000   1111 112237


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|++|.+.+..+++       ..+.++|.|+...
T Consensus        54 i~~~~~Di~d~~~~~~~~~-------~~~~v~~~a~~~~   85 (346)
T d1oc2a_          54 VELVVGDIADAELVDKLAA-------KADAIVHYAAESH   85 (346)
T ss_dssp             EEEEECCTTCHHHHHHHHT-------TCSEEEECCSCCC
T ss_pred             eEEEEccCCCHHHHHHHHh-------hhhhhhhhhhccc
Confidence            8899999999999888765       5888999988764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.02  E-value=2.5e-09  Score=76.07  Aligned_cols=96  Identities=18%  Similarity=0.175  Sum_probs=62.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHH-cCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh------
Q psy7029           3 KIIVVTGASVGIGAAILRALAA-KGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK------   75 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------   75 (125)
                      +.+|||||+|.||..++++|++ .|++|+++++-.....                  ..............+..      
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~   64 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHG------------------KSDHVETRENVARKLQQSDGPKP   64 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTT------------------CCTTSCCHHHHHHHHHHSCSSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccc------------------cchhhhhhhhHHHHhhhhccccc
Confidence            4789999999999999999986 5899999875211100                  00000000111111111      


Q ss_pred             cCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          76 ENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        76 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ......+.++.+|++|.+.+.++++.    ..++|+++|.|+...
T Consensus        65 ~~~~~~~~~~~~Di~d~~~l~~~~~~----~~~~d~ViH~Aa~~~  105 (383)
T d1gy8a_          65 PWADRYAALEVGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLA  105 (383)
T ss_dssp             TTTTCCCEEEESCTTCHHHHHHHHHH----SCCCCEEEECCCCCC
T ss_pred             cccccceEEEECcccCHHHhhhhhhc----cceeehhhccccccc
Confidence            11223577889999999998888864    357899999999765

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.98  E-value=1.1e-09  Score=77.41  Aligned_cols=78  Identities=22%  Similarity=0.151  Sum_probs=59.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .+.+|||||+|.||.+++++|+++|++|+++++.....                               ..  ...  ..
T Consensus        15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~-------------------------------~~--~~~--~~   59 (363)
T d2c5aa1          15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-------------------------------MT--EDM--FC   59 (363)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-------------------------------SC--GGG--TC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc-------------------------------hh--hhc--cc
Confidence            45699999999999999999999999999998754321                               00  000  13


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      ..+..+|+.+.+.+.++++       .+|.++|.|+....
T Consensus        60 ~~~~~~D~~~~~~~~~~~~-------~~d~Vih~a~~~~~   92 (363)
T d2c5aa1          60 DEFHLVDLRVMENCLKVTE-------GVDHVFNLAADMGG   92 (363)
T ss_dssp             SEEEECCTTSHHHHHHHHT-------TCSEEEECCCCCCC
T ss_pred             CcEEEeechhHHHHHHHhh-------cCCeEeeccccccc
Confidence            3567789999988777665       68999999987664

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=98.96  E-value=9.7e-10  Score=75.30  Aligned_cols=83  Identities=17%  Similarity=0.297  Sum_probs=59.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++|||||+|.||++++++|+++|++|+++.|+.......                       .......+.    ...+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~----~~~v   56 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNID-----------------------KVQMLLYFK----QLGA   56 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHH-----------------------HHHHHHHHH----TTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchh-----------------------HHHHHhhhc----cCCc
Confidence            4689999999999999999999999999999976532100                       001111111    1256


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ..+++|+.|.+.+.+.++       ..+.++++++..
T Consensus        57 ~~v~~d~~d~~~~~~~~~-------~~~~~~~~~~~~   86 (312)
T d1qyda_          57 KLIEASLDDHQRLVDALK-------QVDVVISALAGG   86 (312)
T ss_dssp             EEECCCSSCHHHHHHHHT-------TCSEEEECCCCS
T ss_pred             EEEEeecccchhhhhhcc-------Ccchhhhhhhhc
Confidence            788999999998887776       577777777654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3e-10  Score=76.13  Aligned_cols=76  Identities=28%  Similarity=0.315  Sum_probs=55.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPD   79 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (125)
                      +|++|||||+|.+|.+++++|+++|.  +|+++.|++....                              .. .    .
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~------------------------------~~-~----~   58 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD------------------------------EE-A----Y   58 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC------------------------------SG-G----G
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc------------------------------cc-c----c
Confidence            68899999999999999999999995  8999999765331                              00 0    0


Q ss_pred             ceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          80 WKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        80 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      ..+....+|+.+.+.+...+       ..+|.++|++|..
T Consensus        59 ~~i~~~~~D~~~~~~~~~~~-------~~~d~vi~~~~~~   91 (232)
T d2bkaa1          59 KNVNQEVVDFEKLDDYASAF-------QGHDVGFCCLGTT   91 (232)
T ss_dssp             GGCEEEECCGGGGGGGGGGG-------SSCSEEEECCCCC
T ss_pred             ceeeeeeecccccccccccc-------ccccccccccccc
Confidence            13455567777766544433       3689999998864

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.94  E-value=2.1e-09  Score=73.02  Aligned_cols=85  Identities=22%  Similarity=0.341  Sum_probs=60.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |++|||||+|.||++++++|+++|++|+++.|+.........                      ......+..    ..+
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~----------------------~~~~~~~~~----~~~   57 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEK----------------------AQLLESFKA----SGA   57 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHH----------------------HHHHHHHHT----TTC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhH----------------------HHHHHhhcc----CCc
Confidence            689999999999999999999999999999997654311100                      011112211    145


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ..+.+|+.+...+.+.++       ..+.++++++...
T Consensus        58 ~~~~~d~~~~~~~~~~~~-------~~~~vi~~~~~~~   88 (307)
T d1qyca_          58 NIVHGSIDDHASLVEAVK-------NVDVVISTVGSLQ   88 (307)
T ss_dssp             EEECCCTTCHHHHHHHHH-------TCSEEEECCCGGG
T ss_pred             EEEEeecccchhhhhhhh-------hceeeeecccccc
Confidence            677889999998887776       5778888776543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.89  E-value=1.2e-09  Score=74.42  Aligned_cols=65  Identities=23%  Similarity=0.320  Sum_probs=51.7

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      .+|||||+|.||.++++.|.++|.. +.+++...                                              
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~----------------------------------------------   34 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNL-IALDVHSK----------------------------------------------   34 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCS----------------------------------------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCc----------------------------------------------
Confidence            4899999999999999999998864 44444321                                              


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+..|++|.+.+.++++..     ++|+|||+||+..
T Consensus        35 ~~~~Dl~~~~~~~~~i~~~-----~~D~Vih~Aa~~~   66 (298)
T d1n2sa_          35 EFCGDFSNPKGVAETVRKL-----RPDVIVNAAAHTA   66 (298)
T ss_dssp             SSCCCTTCHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             cccCcCCCHHHHHHHHHHc-----CCCEEEEeccccc
Confidence            0246999999999988864     6899999999764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=98.87  E-value=3.6e-09  Score=71.73  Aligned_cols=62  Identities=29%  Similarity=0.339  Sum_probs=53.6

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVH   83 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (125)
                      .+|||||+|.||..++++|.++|++|+.++|+.                                               
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------------------------------   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------------------------------   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------------------------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------------------------------
Confidence            489999999999999999999999999887631                                               


Q ss_pred             EEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          84 SLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        84 ~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                         +|++|.+++.++++..     ++|+++|+|+...
T Consensus        36 ---~D~~d~~~~~~~l~~~-----~~d~vih~a~~~~   64 (281)
T d1vl0a_          36 ---LDITNVLAVNKFFNEK-----KPNVVINCAAHTA   64 (281)
T ss_dssp             ---CCTTCHHHHHHHHHHH-----CCSEEEECCCCCC
T ss_pred             ---ccCCCHHHHHHHHHHc-----CCCEEEeeccccc
Confidence               3889999998888764     6899999998764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.83  E-value=1.1e-08  Score=71.79  Aligned_cols=37  Identities=35%  Similarity=0.421  Sum_probs=34.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      .|+++||||+|.||.+++++|+++|++|+++.|+..+
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            4899999999999999999999999999999998654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.81  E-value=1e-08  Score=71.74  Aligned_cols=88  Identities=17%  Similarity=0.249  Sum_probs=59.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      .|++||||++|.||.+++++|.+.|++|++++|........                        ......+........
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~------------------------~~~~~~~~~~~~~~~   71 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRN------------------------LDEVRSLVSEKQWSN   71 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHH------------------------HHHHHHHSCHHHHTT
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhh------------------------HHHHHHhhhhcccCC
Confidence            47999999999999999999999999999998743211000                        000011111111125


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++.+|+.|...+.....       ..+.++|.++...
T Consensus        72 ~~~~~~d~~d~~~~~~~~~-------~~~~v~~~~a~~~  103 (341)
T d1sb8a_          72 FKFIQGDIRNLDDCNNACA-------GVDYVLHQAALGS  103 (341)
T ss_dssp             EEEEECCTTSHHHHHHHHT-------TCSEEEECCSCCC
T ss_pred             eeEEeeccccccccccccc-------ccccccccccccc
Confidence            7788999999987665544       6788888877543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.8e-08  Score=68.91  Aligned_cols=34  Identities=26%  Similarity=0.337  Sum_probs=31.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      |.+|||||+|.||..++++|+++|++|++++|..
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~   35 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF   35 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCC
Confidence            7899999999999999999999999999998743

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.62  E-value=5.5e-08  Score=66.97  Aligned_cols=64  Identities=20%  Similarity=0.281  Sum_probs=52.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      |.+||||++|.||.+++++|+++|+.++++.+..                                              
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------------------------------   36 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------------------------------   36 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------------------------------
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------------------------------
Confidence            6899999999999999999999999888765421                                              


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                         .+|+.+.+.+.++++.     ..+|.++|+|+...
T Consensus        37 ---~~~~~~~~~~~~~~~~-----~~~d~v~~~a~~~~   66 (315)
T d1e6ua_          37 ---ELNLLDSRAVHDFFAS-----ERIDQVYLAAAKVG   66 (315)
T ss_dssp             ---TCCTTCHHHHHHHHHH-----HCCSEEEECCCCCC
T ss_pred             ---hccccCHHHHHHHHhh-----cCCCEEEEcchhcc
Confidence               1488889888888764     26899999887654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.60  E-value=4.6e-08  Score=67.85  Aligned_cols=81  Identities=16%  Similarity=0.177  Sum_probs=55.2

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeec------CchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcC
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFAR------RAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKEN   77 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (125)
                      .+||||++|.||..+++.|+++|+.|..+.|      .....                          ..   ..+....
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~--------------------------~~---~~~~~~~   52 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAG--------------------------NR---ANLAPVD   52 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTC--------------------------CG---GGGGGGT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccc--------------------------cH---hHhhhhh
Confidence            4799999999999999999999986554432      21110                          00   1111112


Q ss_pred             CCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          78 PDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        78 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      ...++.++..|+.+.........       ..|.++|.|+...
T Consensus        53 ~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vi~~a~~~~   88 (322)
T d1r6da_          53 ADPRLRFVHGDIRDAGLLARELR-------GVDAIVHFAAESH   88 (322)
T ss_dssp             TCTTEEEEECCTTCHHHHHHHTT-------TCCEEEECCSCCC
T ss_pred             cCCCeEEEEeccccchhhhcccc-------ccceEEeeccccc
Confidence            23368899999999987665433       7899999998754

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.38  E-value=1.3e-07  Score=61.90  Aligned_cols=35  Identities=29%  Similarity=0.403  Sum_probs=29.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~   36 (125)
                      -|+++||||+|.||++++++|+++|+  +|++..|+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~   38 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA   38 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence            37899999999999999999999997  566666653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.25  E-value=1.1e-06  Score=55.85  Aligned_cols=38  Identities=24%  Similarity=0.428  Sum_probs=32.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhH
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDF   41 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   41 (125)
                      |++ |+||+|++|+++|+.|++.|++|++.+|++++...
T Consensus         2 ki~-vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~   39 (212)
T d1jaya_           2 RVA-LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA   39 (212)
T ss_dssp             EEE-EETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH
T ss_pred             EEE-EEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            555 55777899999999999999999999999876543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.24  E-value=2.5e-06  Score=54.60  Aligned_cols=38  Identities=26%  Similarity=0.417  Sum_probs=33.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.....|++|+.+.+++++.
T Consensus        30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~   67 (182)
T d1v3va2          30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI   67 (182)
T ss_dssp             SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH
Confidence            78999999999999998888888899999999887644

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=8.2e-06  Score=51.72  Aligned_cols=38  Identities=32%  Similarity=0.405  Sum_probs=33.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|+|+++++|...++.....|++|+++.+++++.
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~   66 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ   66 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEEeccccccccccccccccCccccccccccccc
Confidence            67999999999999998888878899999999876543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.14  E-value=1.4e-05  Score=50.12  Aligned_cols=37  Identities=22%  Similarity=0.226  Sum_probs=33.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +|.++|.|+ |.+|+.+++.|+++|++|++++|+.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a   38 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESA   38 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHH
Confidence            588999886 8999999999999999999999998765

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.08  E-value=1e-05  Score=51.47  Aligned_cols=38  Identities=16%  Similarity=0.221  Sum_probs=33.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.++||+|+++++|...+..+...|++++++.+++++.
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~   63 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR   63 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccccc
Confidence            67999999999999999988888899999998876543

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.04  E-value=1.8e-05  Score=50.61  Aligned_cols=83  Identities=25%  Similarity=0.326  Sum_probs=58.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +|.++|.|+ ||.+++++..|.+.|. ++++++|+.+..+....                        ..+.+....   
T Consensus        18 ~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~------------------------l~~~~~~~~---   69 (182)
T d1vi2a1          18 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALA------------------------FAQRVNENT---   69 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH------------------------HHHHHHHHS---
T ss_pred             CCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHH------------------------HHHHHHhhc---
Confidence            689999996 6999999999999997 78888998765532111                        112232222   


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                      .......|+.+.+.+.....       ..|++||+..+.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~-------~~diiIN~Tp~G  101 (182)
T d1vi2a1          70 DCVVTVTDLADQQAFAEALA-------SADILTNGTKVG  101 (182)
T ss_dssp             SCEEEEEETTCHHHHHHHHH-------TCSEEEECSSTT
T ss_pred             CcceEeeecccccchhhhhc-------ccceeccccCCc
Confidence            22345678888888776655       689999997654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.04  E-value=1.1e-05  Score=51.12  Aligned_cols=38  Identities=21%  Similarity=0.265  Sum_probs=34.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.....|++|+++++++++.
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~   66 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA   66 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH
Confidence            68999999999999998888778899999999998765

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=3.6e-06  Score=56.84  Aligned_cols=30  Identities=37%  Similarity=0.552  Sum_probs=27.1

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeec
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFAR   34 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r   34 (125)
                      +|||||+|.||..++++|+++|+ .|+++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~   32 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN   32 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC
Confidence            79999999999999999999996 6888764

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.95  E-value=1.7e-05  Score=48.04  Aligned_cols=35  Identities=20%  Similarity=0.481  Sum_probs=31.2

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .++|.|+ |.+|+.+++.|.+.|+.|++++++++..
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~   36 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC   36 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhh
Confidence            5788886 8999999999999999999999987754

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.91  E-value=6.8e-05  Score=46.96  Aligned_cols=37  Identities=27%  Similarity=0.299  Sum_probs=32.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|+| +|++|...+..+...|++|+++++++.+.
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~   63 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRL   63 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHH
Confidence            67899997 67999999988888899999999987755

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=2.8e-05  Score=43.09  Aligned_cols=38  Identities=37%  Similarity=0.459  Sum_probs=33.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++++|+|+++|+|......+...|++|+++.+++++.
T Consensus        32 ~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~   69 (77)
T d1o8ca2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (77)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            56899999999999998887777899999999988765

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.80  E-value=7.2e-05  Score=47.18  Aligned_cols=38  Identities=26%  Similarity=0.405  Sum_probs=33.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|+|+++++|...++.....|++|+++.+++++.
T Consensus        28 g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~   65 (171)
T d1iz0a2          28 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL   65 (171)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS
T ss_pred             CCEEEEEeccccchhhhhhhhccccccccccccccccc
Confidence            67999999999999998887778899999999887654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.76  E-value=6.1e-05  Score=47.21  Aligned_cols=37  Identities=27%  Similarity=0.415  Sum_probs=32.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++.++|.|+ |++|..+++.|...|+ ++.++.|+.+..
T Consensus        24 ~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka   61 (159)
T d1gpja2          24 DKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERA   61 (159)
T ss_dssp             TCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHH
Confidence            578999997 9999999999999998 688999987654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.67  E-value=4.3e-05  Score=48.73  Aligned_cols=38  Identities=29%  Similarity=0.373  Sum_probs=33.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.++||+|++||+|....+.....|++|+.+.+++++.
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~   69 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH   69 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH
Confidence            57899999999999998877777899999999987755

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.66  E-value=0.00031  Score=44.39  Aligned_cols=37  Identities=24%  Similarity=0.267  Sum_probs=31.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|+|+ |++|...+..+...|+ +|++++++++..
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~   66 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL   66 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH
T ss_pred             CCEEEEECC-Cccchhheecccccccccccccccccccc
Confidence            678999996 7999998888888898 799999987755

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.59  E-value=8.7e-05  Score=44.69  Aligned_cols=36  Identities=28%  Similarity=0.457  Sum_probs=31.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.++|.|+ |-+|+.+++.|.+.|+.|++++.+++..
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~   36 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV   36 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHH
Confidence            45778875 7889999999999999999999987654

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.57  E-value=0.00017  Score=46.11  Aligned_cols=39  Identities=15%  Similarity=0.164  Sum_probs=30.6

Q ss_pred             CcEEEE-ecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           2 SKIIVV-TGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         2 ~~~~lI-tG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      |+.++| +|+++++|...++.....|++|+++.++.+..+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~   68 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD   68 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccc
Confidence            454555 789999999988777777999999988776543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.56  E-value=0.00023  Score=44.46  Aligned_cols=38  Identities=29%  Similarity=0.493  Sum_probs=32.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      +.+++|.|+++++|...+..+...|+ .|+++++++.+.
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~   66 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV   66 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchhhH
Confidence            67899999999999999998888885 888888887644

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=0.00025  Score=46.69  Aligned_cols=79  Identities=24%  Similarity=0.298  Sum_probs=52.8

Q ss_pred             CcEEEEecC----------------CcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccc
Q psy7029           2 SKIIVVTGA----------------SVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFAR   65 (125)
Q Consensus         2 ~~~~lItG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (125)
                      |+.+|||+|                ||-.|.++|+++.++|++|.++.-.....                          
T Consensus         6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~--------------------------   59 (223)
T d1u7za_           6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--------------------------   59 (223)
T ss_dssp             TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--------------------------
T ss_pred             CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC--------------------------
Confidence            678888864                35699999999999999999987644311                          


Q ss_pred             hHhHHHHHhhcCCCceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCCcC
Q psy7029          66 RAEMIDAMAKENPDWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEFAP  123 (125)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~  123 (125)
                                 .+. .+..+  .+...+++..   .+.+.+...|++|.+|++..+.|
T Consensus        60 -----------~p~-~~~~~--~~~t~~~m~~---~~~~~~~~~D~~i~aAAvsDf~~  100 (223)
T d1u7za_          60 -----------TPP-FVKRV--DVMTALEMEA---AVNASVQQQNIFIGCAAVADYRA  100 (223)
T ss_dssp             -----------CCT-TEEEE--ECCSHHHHHH---HHHHHGGGCSEEEECCBCCSEEE
T ss_pred             -----------ccc-ccccc--eehhhHHHHH---HHHhhhccceeEeeeechhhhhh
Confidence                       111 22222  3444454444   44444557899999999988743

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=0.0011  Score=41.38  Aligned_cols=37  Identities=30%  Similarity=0.287  Sum_probs=31.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ |++|...+..+...|+ +|+++++++.+.
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl   64 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL   64 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHH
Confidence            678899986 8999999988888898 799999987655

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.00016  Score=45.57  Aligned_cols=37  Identities=19%  Similarity=0.156  Sum_probs=33.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ||.++|.| +||.+++++..|.+.|.++.++.|+.++.
T Consensus        18 ~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka   54 (170)
T d1nyta1          18 GLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRA   54 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHH
Confidence            68999999 57889999999999999999999998755

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.39  E-value=0.00026  Score=44.31  Aligned_cols=37  Identities=22%  Similarity=0.196  Sum_probs=31.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ |++|...+..+...|++|+++++++++.
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~   64 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR   64 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH
T ss_pred             CCEEEEECC-CCcchhHHHHhhhccccccccccchhHH
Confidence            678999986 8999998887777899999999988755

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.37  E-value=0.0015  Score=39.89  Aligned_cols=38  Identities=24%  Similarity=0.269  Sum_probs=33.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .+++.|.|+.|-+|.++++.|.+.|++|.+.+|+....
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            46888999999999999999999999999999987643

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.36  E-value=0.00058  Score=42.98  Aligned_cols=37  Identities=14%  Similarity=0.218  Sum_probs=32.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +|.++|.| +||.+++++..|.+.+.++.++.|+.+..
T Consensus        18 ~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a   54 (171)
T d1p77a1          18 NQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKT   54 (171)
T ss_dssp             TCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHH
Confidence            67889988 57889999999998888999999998755

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.35  E-value=0.00028  Score=44.56  Aligned_cols=37  Identities=22%  Similarity=0.387  Sum_probs=30.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...+..+...|+ +|+++++++.+.
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~   65 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICV   65 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHH
T ss_pred             CCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhH
Confidence            678899986 8999998888888897 799999887654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.0006  Score=42.50  Aligned_cols=37  Identities=24%  Similarity=0.343  Sum_probs=31.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ |++|...+..+...|+++++++++.++.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~   67 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR   67 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH
Confidence            678999986 8899998877777899999999877644

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=0.00043  Score=44.04  Aligned_cols=36  Identities=19%  Similarity=0.181  Sum_probs=27.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEE-eecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIG-FARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~-~~r~~~   37 (125)
                      ++++||+||+||+|...++.....|+++++ +..+++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e   67 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQE   67 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHH
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHH
Confidence            378999999999999988876668986555 455544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.24  E-value=0.00025  Score=44.66  Aligned_cols=39  Identities=28%  Similarity=0.453  Sum_probs=33.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      +.++||+|+++|+|...++.....|++|+.+.+++++.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~   62 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD   62 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHH
Confidence            457999999999999988766667999999999987653

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00038  Score=44.17  Aligned_cols=37  Identities=38%  Similarity=0.467  Sum_probs=32.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .++||+|++||+|...++.....|++|+++.+++++.
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~   69 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH
Confidence            4899999999999998877777899999999988765

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.17  E-value=0.0022  Score=39.60  Aligned_cols=37  Identities=16%  Similarity=0.302  Sum_probs=31.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...+..+...|++|+++++++.+.
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~   64 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL   64 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHH
Confidence            678999886 8999998887777899999999987655

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.00075  Score=41.38  Aligned_cols=34  Identities=18%  Similarity=0.221  Sum_probs=29.4

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +++|.|. +.+|+.+++.|.+.|..++++..+++.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~   38 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPED   38 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchh
Confidence            5778885 689999999999999999999988753

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.07  E-value=0.0044  Score=38.15  Aligned_cols=35  Identities=40%  Similarity=0.526  Sum_probs=29.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+.+| | .|-+|.++++.|.+.|++|++++|+++..
T Consensus         2 kI~iI-G-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~   36 (165)
T d2f1ka2           2 KIGVV-G-LGLIGASLAGDLRRRGHYLIGVSRQQSTC   36 (165)
T ss_dssp             EEEEE-C-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             EEEEE-e-ecHHHHHHHHHHHHCCCEEEEEECCchHH
Confidence            55554 5 58899999999999999999999987644

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.07  E-value=0.00098  Score=41.71  Aligned_cols=37  Identities=22%  Similarity=0.396  Sum_probs=31.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +|+|...+..+...|+ +|+++++++.+.
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~   66 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKF   66 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHH
Confidence            679999998 6799999999998885 899999887755

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.03  E-value=0.00056  Score=42.84  Aligned_cols=37  Identities=22%  Similarity=0.395  Sum_probs=31.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      ++.++|.|+ ||.+++++..|.+.|+ ++.++.|+.+..
T Consensus        17 ~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka   54 (167)
T d1npya1          17 NAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTG   54 (167)
T ss_dssp             TSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHH
Confidence            467889985 8999999999999997 799999987654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.98  E-value=0.0017  Score=40.66  Aligned_cols=37  Identities=22%  Similarity=0.232  Sum_probs=28.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEE-EeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVI-GFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~-~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...+..+...|++++ ++++++.+.
T Consensus        29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~   66 (174)
T d1f8fa2          29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL   66 (174)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred             CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHH
Confidence            678999987 8999999988877888554 556665544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.95  E-value=0.0021  Score=40.38  Aligned_cols=37  Identities=22%  Similarity=0.424  Sum_probs=32.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +|+|...+..+...|+ +|+++++++++.
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl   67 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF   67 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHH
Confidence            678999985 8999999999998985 899999998866

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.89  E-value=0.0021  Score=39.96  Aligned_cols=37  Identities=22%  Similarity=0.420  Sum_probs=29.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +|+|...+..+...|+ .|+++++++.+.
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~   66 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF   66 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH
Confidence            678999997 5899998888888896 566677766554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.79  E-value=0.0022  Score=39.30  Aligned_cols=35  Identities=34%  Similarity=0.503  Sum_probs=29.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.|.|+ |.+|..++..|++.|++|.+++|+....
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            4566676 9999999999999999999999987643

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.77  E-value=0.0022  Score=40.20  Aligned_cols=37  Identities=22%  Similarity=0.378  Sum_probs=31.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +|+|...+..+...|+ +|+++++++++.
T Consensus        28 G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl   65 (174)
T d1p0fa2          28 GSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF   65 (174)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHH
Confidence            678999985 8999999998888886 788899988765

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.73  E-value=0.028  Score=35.57  Aligned_cols=44  Identities=25%  Similarity=0.339  Sum_probs=35.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHH
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLF   46 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~   46 (125)
                      =|++-|.|+ |-+|..+|..|+..|+.|++++++++..+......
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i   47 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI   47 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence            467788886 67999999999999999999999988665443333

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.67  E-value=0.0076  Score=37.69  Aligned_cols=37  Identities=16%  Similarity=0.210  Sum_probs=30.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.| .+++|...+..+...|+ .|+++++++++.
T Consensus        29 G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~   66 (174)
T d1e3ia2          29 GSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKF   66 (174)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             CCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHH
Confidence            67899997 59999999998888898 677888887654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.55  E-value=0.016  Score=35.35  Aligned_cols=37  Identities=19%  Similarity=0.319  Sum_probs=31.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ |++|...+..+...|++|+++++++.+.
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~   64 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL   64 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHh
Confidence            678899875 8899998888888899999999887755

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.53  E-value=0.011  Score=36.33  Aligned_cols=36  Identities=22%  Similarity=0.284  Sum_probs=29.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      |+.+| | .|-+|..+|+.|++.|++|++++|+++..+
T Consensus         2 kIgiI-G-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~   37 (161)
T d1vpda2           2 KVGFI-G-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIA   37 (161)
T ss_dssp             EEEEE-C-CSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEEE-e-hhHHHHHHHHHHHHCCCeEEEEeCCcchhH
Confidence            55554 4 688999999999999999999999977543

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.52  E-value=0.0015  Score=36.75  Aligned_cols=35  Identities=20%  Similarity=0.188  Sum_probs=30.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||+++|.|. +.-|+++++.|.++|++|++.+.+..
T Consensus         5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            688999996 55699999999999999999998654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.50  E-value=0.027  Score=34.91  Aligned_cols=33  Identities=18%  Similarity=0.386  Sum_probs=28.4

Q ss_pred             EEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           6 VVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         6 lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      =+.| -|-+|..+++.|++.|++|++++|+++..
T Consensus         6 g~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~   38 (176)
T d2pgda2           6 ALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKV   38 (176)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHH
T ss_pred             EEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            3455 57899999999999999999999998765

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.38  E-value=0.0052  Score=35.62  Aligned_cols=35  Identities=14%  Similarity=0.096  Sum_probs=30.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||.++|.|+ |-+|..-++.|++.|++|++++....
T Consensus        12 ~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1          12 DRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            789999995 55999999999999999999987654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.37  E-value=0.012  Score=37.45  Aligned_cols=37  Identities=22%  Similarity=0.153  Sum_probs=29.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...+..+...|+ +|+++++++.+.
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl   63 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL   63 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhh
Confidence            678999986 7999887777666776 788888887654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.31  E-value=0.014  Score=36.05  Aligned_cols=37  Identities=19%  Similarity=0.363  Sum_probs=28.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +++|...+..+...|+ .|+++++++.+.
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~   70 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL   70 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHH
Confidence            678999885 9999998888877786 667777776544

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.28  E-value=0.032  Score=34.12  Aligned_cols=37  Identities=22%  Similarity=0.240  Sum_probs=30.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.|+.+ .| .|-+|.++|+.|++.|++|.+.+|+.+..
T Consensus         1 M~kIg~-IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~   37 (162)
T d3cuma2           1 MKQIAF-IG-LGHMGAPMATNLLKAGYLLNVFDLVQSAV   37 (162)
T ss_dssp             CCEEEE-EC-CSTTHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CCEEEE-EE-EHHHHHHHHHHHHHCCCeEEEEECchhhh
Confidence            545444 44 78899999999999999999999987654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.27  E-value=0.036  Score=34.77  Aligned_cols=111  Identities=17%  Similarity=0.090  Sum_probs=58.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhc--CC--
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKE--NP--   78 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--   78 (125)
                      |++-|.|+ |-+|..+|..|+..|++|++++++++...................+...  ..........+...  ..  
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~   81 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMT--PAKMAEVLNGIRPTLSYGDF   81 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSC--HHHHHHHHHHEEEESSSTTG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccc--hhhhhhhhceeecccccccc
Confidence            45666775 7799999999999999999999998765433332222222111111110  00111111111100  00  


Q ss_pred             CceeeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCc
Q psy7029          79 DWKVHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNA  116 (125)
Q Consensus        79 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~na  116 (125)
                      ...-..+.+-..+.+.-.++++++.+....=-++..|.
T Consensus        82 ~~adlViEav~E~l~~K~~lf~~l~~~~~~~~IiaSnT  119 (186)
T d1wdka3          82 GNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNT  119 (186)
T ss_dssp             GGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred             cccceeeeeecchHHHHHHHHHHHHhhcCCCeeEEecc
Confidence            11123456666777777778887766543333444443

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.20  E-value=0.039  Score=34.08  Aligned_cols=35  Identities=29%  Similarity=0.284  Sum_probs=29.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+.+|  |.|-+|..+++.|++.|++|.+.+|++++.
T Consensus         3 kIGvI--GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           3 DVGVV--GLGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             SEEEE--CCSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             EEEEE--eehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            55555  578899999999999999999999987754

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.16  E-value=0.02  Score=35.22  Aligned_cols=37  Identities=16%  Similarity=0.247  Sum_probs=28.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |.+++|.|+ +|+|...+..+...|. .|+++++++++.
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl   66 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF   66 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHH
Confidence            678999985 6677777777777765 788898887755

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.14  E-value=0.053  Score=33.04  Aligned_cols=36  Identities=19%  Similarity=0.438  Sum_probs=29.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      |.+.|.| .|-+|.++++.|.+.|+  +|++++++.+..
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~   39 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI   39 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHH
Confidence            6678887 58899999999999986  788888886644

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.12  E-value=0.0041  Score=36.83  Aligned_cols=34  Identities=24%  Similarity=0.313  Sum_probs=25.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+++|.| .+.+|+.+++.|.  +..++++..++...
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~   34 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVR   34 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHH
Confidence            5678888 5778999999984  55677777776543

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=96.07  E-value=0.0039  Score=40.08  Aligned_cols=35  Identities=26%  Similarity=0.476  Sum_probs=31.2

Q ss_pred             CCcEEEEecCCcchHHH-----HHHHHHHcCCeEEEeecC
Q psy7029           1 MSKIIVVTGASVGIGAA-----ILRALAAKGHQVIGFARR   35 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r~   35 (125)
                      |+|++.|+++-||.|+.     ++..|++.|.+|.+++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            89999999999988876     778889999999999865

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.02  E-value=0.013  Score=35.65  Aligned_cols=34  Identities=24%  Similarity=0.245  Sum_probs=28.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC--eEEEeecCch
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH--QVIGFARRAE   37 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~   37 (125)
                      ++.|+||+|.+|.+++..|+.++.  ++++++.+..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~   37 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT   37 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc
Confidence            467899999999999999998885  7888887653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.97  E-value=0.0034  Score=38.26  Aligned_cols=33  Identities=21%  Similarity=0.275  Sum_probs=29.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      ||.+||.|| |.+|..-++.|++.|++|++++..
T Consensus        13 gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          13 DKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             TCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            799999997 559999999999999999999764

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.81  E-value=0.0072  Score=37.41  Aligned_cols=36  Identities=33%  Similarity=0.348  Sum_probs=31.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++-|.|+ |.+|.+++..|+++|++|.+++|+++..
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~   37 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRI   37 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            67778885 7899999999999999999999987654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.80  E-value=0.027  Score=35.20  Aligned_cols=35  Identities=23%  Similarity=0.234  Sum_probs=31.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ||.++|.|.+.=+|+.++..|+++|+.|..+....
T Consensus        29 GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~   63 (171)
T d1edza1          29 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN   63 (171)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence            79999999999999999999999999998776543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.72  E-value=0.0066  Score=39.43  Aligned_cols=34  Identities=29%  Similarity=0.273  Sum_probs=28.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      +|+++|.|+ |--|...|.+|++.|++|.++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588899985 4558899999999999999998764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.60  E-value=0.012  Score=36.59  Aligned_cols=38  Identities=29%  Similarity=0.306  Sum_probs=31.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhH
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDF   41 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   41 (125)
                      +|.++|.| +||.+++++..|.+.| ++.++.|+.+..+.
T Consensus        18 ~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~   55 (177)
T d1nvta1          18 DKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEA   55 (177)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHH
T ss_pred             CCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHH
Confidence            68899998 5678999999997777 99999999876643

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=95.58  E-value=0.056  Score=32.66  Aligned_cols=36  Identities=17%  Similarity=0.280  Sum_probs=29.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~   39 (125)
                      +++.|.|+ |.+|..++..|+.+|  .+++++++++...
T Consensus         6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~   43 (146)
T d1ez4a1           6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRT   43 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence            46777785 889999999999988  4899999987643

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.57  E-value=0.0098  Score=37.04  Aligned_cols=35  Identities=29%  Similarity=0.284  Sum_probs=32.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||+++|.| .+-+|+.+|+.|...|++|+++..++-
T Consensus        24 Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~   58 (163)
T d1li4a1          24 GKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPI   58 (163)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCEEEEec-cccccHHHHHHHHhCCCeeEeeecccc
Confidence            89999999 568999999999999999999999874

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.55  E-value=0.0056  Score=39.43  Aligned_cols=37  Identities=19%  Similarity=0.293  Sum_probs=31.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+++.|.| -|.+|..+++.|.+.|++|++.+.+....
T Consensus        27 gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~   63 (201)
T d1c1da1          27 GLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERV   63 (201)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHH
Confidence            78888887 66799999999999999999998876543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.25  E-value=0.028  Score=32.76  Aligned_cols=35  Identities=26%  Similarity=0.227  Sum_probs=30.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +.++|.| +|.+|..+|..|++.|.+|.++.+.+..
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~l   67 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAMF   67 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEeccccc
Confidence            5667777 7789999999999999999999998654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.23  E-value=0.018  Score=33.72  Aligned_cols=36  Identities=28%  Similarity=0.224  Sum_probs=30.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +|.++|.| +|.+|..+|..|++.|.+|.++.+.+..
T Consensus        30 ~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          30 VNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCcc
Confidence            45677776 7799999999999999999999887654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.17  E-value=0.02  Score=33.55  Aligned_cols=37  Identities=14%  Similarity=0.234  Sum_probs=31.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.++|.| +|.+|..+|..|+++|.+|.++.+.+..+
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~l   66 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRLM   66 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccccc
Confidence            46777777 78999999999999999999999987644

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.15  E-value=0.051  Score=36.66  Aligned_cols=26  Identities=27%  Similarity=0.174  Sum_probs=22.8

Q ss_pred             cchHHHHHHHHHHcCCeEEEeecCch
Q psy7029          12 VGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus        12 ~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |-.|.++|++|..+|+.|+++.+..+
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            45899999999999999999987644

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.10  E-value=0.016  Score=37.04  Aligned_cols=33  Identities=42%  Similarity=0.359  Sum_probs=28.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      .|.++|.| +|-.|.++|..|+++|++|.++.|.
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            35688888 5678999999999999999999885

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=95.09  E-value=0.0097  Score=37.55  Aligned_cols=32  Identities=31%  Similarity=0.516  Sum_probs=28.1

Q ss_pred             cEEEEecCCcchHHH-----HHHHHHHcCCeEEEeec
Q psy7029           3 KIIVVTGASVGIGAA-----ILRALAAKGHQVIGFAR   34 (125)
Q Consensus         3 ~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r   34 (125)
                      |..+|||.+.|.|+.     +++.|+++|++|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            789999988898887     78999999999999874

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.05  E-value=0.017  Score=37.71  Aligned_cols=31  Identities=32%  Similarity=0.298  Sum_probs=27.3

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.| +|-.|.++|.+|+++|.+|+++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            77777 67789999999999999999999864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.03  E-value=0.14  Score=30.08  Aligned_cols=74  Identities=12%  Similarity=0.179  Sum_probs=50.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEe-ecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGF-ARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .+.|.|++|-.|+.+++.+.++++.++.. +++....                                     ..... 
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~-------------------------------------~~~~D-   43 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE-------------------------------------LDSPD-   43 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE-------------------------------------CSCCS-
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH-------------------------------------hccCC-
Confidence            47889999999999999888889877653 3322110                                     11112 


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                        +..|++.++.+.+.++...+.  ++-+++-..|+.
T Consensus        44 --VvIDFS~p~~~~~~l~~~~~~--~~p~ViGTTG~~   76 (128)
T d1vm6a3          44 --VVIDFSSPEALPKTVDLCKKY--RAGLVLGTTALK   76 (128)
T ss_dssp             --EEEECSCGGGHHHHHHHHHHH--TCEEEECCCSCC
T ss_pred             --EEEEecCHHHHHHHHHHHHhc--CCCEEEEcCCCC
Confidence              456999999988888887665  345566555543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.95  E-value=0.17  Score=30.12  Aligned_cols=77  Identities=19%  Similarity=0.359  Sum_probs=47.2

Q ss_pred             EEEEecCCcchHHHHHHHHHHc-CCeEEE-eecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           4 IIVVTGASVGIGAAILRALAAK-GHQVIG-FARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~-g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      ++.|.|++|-+|+.+++...+. ++.++. +++... .                               ..+.....  .
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~-------------------------------~~~~~~~~--D   46 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-L-------------------------------SLLTDGNT--E   46 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-T-------------------------------HHHHTTTC--S
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-h-------------------------------hhhccccC--C
Confidence            4678999999999999987765 566554 333221 1                               11111111  1


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVN  119 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~  119 (125)
                         +..|++.++.+...++...+.  ++-.++=..|+.
T Consensus        47 ---vvIDFS~p~~~~~~~~~~~~~--~~~~ViGTTG~~   79 (135)
T d1yl7a1          47 ---VVIDFTHPDVVMGNLEFLIDN--GIHAVVGTTGFT   79 (135)
T ss_dssp             ---EEEECCCTTTHHHHHHHHHHT--TCEEEECCCCCC
T ss_pred             ---EEEEcccHHHHHHHHHHHHhc--CCCEEEeccccc
Confidence               456888888888888877654  455565554443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.93  E-value=0.018  Score=36.63  Aligned_cols=34  Identities=29%  Similarity=0.435  Sum_probs=29.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |+++|  |.|.+|..+|..|++.|++|++++.+...
T Consensus         2 kI~Vi--GlG~vGl~~a~~la~~g~~V~g~D~n~~~   35 (202)
T d1mv8a2           2 RISIF--GLGYVGAVCAGCLSARGHEVIGVDVSSTK   35 (202)
T ss_dssp             EEEEE--CCSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             EEEEE--CCCHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            66665  58899999999999999999999988654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.91  E-value=0.016  Score=35.94  Aligned_cols=35  Identities=20%  Similarity=0.171  Sum_probs=29.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~   37 (125)
                      +|.++|.| +|-.|...|..|++.|+ .|.++.++..
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            46788888 56779999999999998 5999998765

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.80  E-value=0.027  Score=32.48  Aligned_cols=36  Identities=31%  Similarity=0.305  Sum_probs=31.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      .+.++|.| +|.+|..+|..|.+.|.+|.++.|.+.-
T Consensus        22 p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          22 PKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCeEEEEC-CCccceeeeeeecccccEEEEEEeccee
Confidence            36778887 6789999999999999999999988763

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.78  E-value=0.023  Score=35.71  Aligned_cols=35  Identities=37%  Similarity=0.431  Sum_probs=30.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      .|.++|.| +|--|.+.|..|+++|++|.++.+++.
T Consensus        43 ~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          43 KKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCc
Confidence            57888888 566799999999999999999999764

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.78  E-value=0.16  Score=29.09  Aligned_cols=34  Identities=24%  Similarity=0.332  Sum_probs=27.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      .++.|.| +|=+|+-++....+.|+++++++.++.
T Consensus        12 ~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~   45 (111)
T d1kjqa2          12 TRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYAD   45 (111)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred             CEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            3577787 556899999988889999999998754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.75  E-value=0.026  Score=33.06  Aligned_cols=35  Identities=20%  Similarity=0.206  Sum_probs=30.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |.++|.| +|.+|..+|..|++.|.+|.++.|++..
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecccc
Confidence            5778888 5579999999999999999999998654

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.61  E-value=0.019  Score=36.63  Aligned_cols=35  Identities=29%  Similarity=0.319  Sum_probs=30.2

Q ss_pred             cEEEEecCCcchHHH-----HHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAA-----ILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |++.|+++-||.|+.     +|..|+++|.+|.+++-+..
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~   41 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT   41 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            899999998888876     67889999999999987654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.53  E-value=0.034  Score=32.00  Aligned_cols=36  Identities=28%  Similarity=0.257  Sum_probs=30.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      .+.++|.| ++.+|..+|..|.+.|.+|.++.+.+.-
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            35677776 7789999999999999999999997654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.49  E-value=0.034  Score=32.10  Aligned_cols=36  Identities=17%  Similarity=0.167  Sum_probs=30.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.++|.| +|.+|..+|..|.+.|.+|.++.|.+...
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~l   57 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAPL   57 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecchhh
Confidence            5677777 67899999999999999999999987543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.49  E-value=0.036  Score=32.19  Aligned_cols=36  Identities=19%  Similarity=0.155  Sum_probs=31.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      .+.++|.| +|-||..+|..|++.|.+|.++.+..+.
T Consensus        22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            36778888 7799999999999999999999988764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.47  E-value=0.04  Score=33.22  Aligned_cols=37  Identities=19%  Similarity=0.218  Sum_probs=29.7

Q ss_pred             CcEEEEe-cCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVT-GASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lIt-G~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      ++.++|. .+++.+|..+|..|+++|++|.++.+.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            3455554 356789999999999999999999987653

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.45  E-value=0.038  Score=33.93  Aligned_cols=36  Identities=14%  Similarity=0.209  Sum_probs=31.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      |..+|..||+.|   ..+..|+++|++|+.++.++....
T Consensus        21 ~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~   56 (201)
T d1pjza_          21 GARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVE   56 (201)
T ss_dssp             TCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHH
T ss_pred             CCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHH
Confidence            678999999888   577799999999999999987653

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.39  E-value=0.03  Score=33.83  Aligned_cols=34  Identities=9%  Similarity=0.143  Sum_probs=28.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |+.+|  |.|-+|..+++.|+++|++|++.+++.+.
T Consensus         2 kIgiI--G~G~mG~~ia~~l~~~g~~v~~~~~~~~~   35 (152)
T d1i36a2           2 RVGFI--GFGEVAQTLASRLRSRGVEVVTSLEGRSP   35 (152)
T ss_dssp             EEEEE--SCSHHHHHHHHHHHHTTCEEEECCTTCCH
T ss_pred             EEEEE--cHHHHHHHHHHHHHHCCCeEEEEcCchhH
Confidence            66666  46899999999999999999999887654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.37  E-value=0.24  Score=29.54  Aligned_cols=35  Identities=26%  Similarity=0.288  Sum_probs=30.4

Q ss_pred             cEEEEecCC---cchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGAS---VGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~---~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |.+.|.|++   +..|..+++.|.+.|++|+.+.....
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~   57 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE   57 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccc
Confidence            678899987   47999999999999999999987644

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.33  E-value=0.027  Score=37.06  Aligned_cols=34  Identities=32%  Similarity=0.371  Sum_probs=28.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |.++|.|+ |--|.+.|.+|+++|++|.++.++..
T Consensus        31 kkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          31 KHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            67888884 45589999999999999999988653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.33  E-value=0.038  Score=32.22  Aligned_cols=35  Identities=17%  Similarity=0.206  Sum_probs=30.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      |.++|.| +|-+|..+|..|.+.|.+|.++.+.+..
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEEecccc
Confidence            5677887 6789999999999999999999987654

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.21  E-value=0.19  Score=27.65  Aligned_cols=32  Identities=28%  Similarity=0.324  Sum_probs=24.6

Q ss_pred             EEEecCCcchHH-HHHHHHHHcCCeEEEeecCch
Q psy7029           5 IVVTGASVGIGA-AILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~-~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +-+.| -+|+|. ++|+.|.++|+.|...++...
T Consensus         4 ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~   36 (89)
T d1j6ua1           4 IHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEET   36 (89)
T ss_dssp             EEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             EEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence            33444 667777 578999999999999998754

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.19  E-value=0.05  Score=34.92  Aligned_cols=35  Identities=17%  Similarity=0.209  Sum_probs=30.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +..+|..||+.|   ..+..|++.|++|+.++-++...
T Consensus        46 ~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai   80 (229)
T d2bzga1          46 GLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGI   80 (229)
T ss_dssp             SCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHH
Confidence            568999999988   56888999999999999998654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.14  E-value=0.018  Score=36.44  Aligned_cols=37  Identities=27%  Similarity=0.275  Sum_probs=30.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.+.|.| +|..|.+++..|++.|++|.+++|+++..
T Consensus         7 m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~   43 (189)
T d1n1ea2           7 LNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEV   43 (189)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHH
T ss_pred             eceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHH
Confidence            35677888 45689999999999999999999987644

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.12  E-value=0.036  Score=35.65  Aligned_cols=34  Identities=24%  Similarity=0.222  Sum_probs=28.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++++|.| +|--|..+|..|+++|++|+++.++.+
T Consensus         5 ~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           5 DRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            5678888 455688889999999999999998654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.10  E-value=0.041  Score=31.88  Aligned_cols=35  Identities=26%  Similarity=0.302  Sum_probs=30.0

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +.++|.| +|.+|..+|..|++.|.+|.++.|.+..
T Consensus        23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhccccceeeehhccc
Confidence            5677777 6789999999999999999999997653

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.09  E-value=0.051  Score=31.29  Aligned_cols=36  Identities=17%  Similarity=0.247  Sum_probs=31.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      ++.++|.| +|-+|..+|..|++.|.+|.++.|.+..
T Consensus        22 ~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          22 GSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccchh
Confidence            46778777 7789999999999999999999998653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.07  E-value=0.037  Score=32.30  Aligned_cols=37  Identities=24%  Similarity=0.268  Sum_probs=31.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .+.++|.| ++-+|..+|..|.+.|.+|.++.|++...
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~l   61 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEIV   61 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence            35677777 77899999999999999999999987643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.99  E-value=0.034  Score=34.72  Aligned_cols=32  Identities=16%  Similarity=0.310  Sum_probs=26.9

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++|.| +|--|...|.+|+++|.+|.++.++..
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            47777 556689999999999999999999753

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.059  Score=33.57  Aligned_cols=38  Identities=21%  Similarity=0.218  Sum_probs=34.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ||.++|.|.+.=+|+.++..|+++|+.|..+.......
T Consensus        39 Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          39 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             cceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            89999999999999999999999999999988866543

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=93.84  E-value=0.028  Score=36.91  Aligned_cols=34  Identities=21%  Similarity=0.409  Sum_probs=28.7

Q ss_pred             cEEEEecCCcchHHH-----HHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAA-----ILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |++.|+| -||.|+.     ++..|++.|++|.+++-+++
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            7788888 7788876     67799999999999999865

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.77  E-value=0.063  Score=32.30  Aligned_cols=35  Identities=23%  Similarity=0.264  Sum_probs=28.3

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC-CeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG-HQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~   39 (125)
                      |..+ .| .|-+|.++++.|++.| +++++.+|+++..
T Consensus         2 kI~f-IG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~   37 (152)
T d1yqga2           2 NVYF-LG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKR   37 (152)
T ss_dssp             EEEE-EC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHH
T ss_pred             EEEE-Ec-CcHHHHHHHHHHHHCCCCcEEEEeCChhHH
Confidence            5444 45 5889999999999887 8999999997654

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.70  E-value=0.29  Score=28.83  Aligned_cols=38  Identities=32%  Similarity=0.380  Sum_probs=29.3

Q ss_pred             CcEEEEecCCc-c---------hHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASV-G---------IGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~-g---------iG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      -|++||.|++. .         .+.+.++.|.+.|++++++..++...
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TV   54 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATI   54 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCG
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhh
Confidence            36889988753 2         34557888999999999999988754

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.69  E-value=0.36  Score=28.87  Aligned_cols=34  Identities=24%  Similarity=0.308  Sum_probs=29.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC--eEEEeecCch
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH--QVIGFARRAE   37 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~   37 (125)
                      ++.|+|++|.+|..++..|+.++.  +++++++++.
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            477899999999999999999984  8999998753

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.66  E-value=0.49  Score=30.35  Aligned_cols=32  Identities=22%  Similarity=0.310  Sum_probs=27.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      .+++|.| .||+|..++..|++.|. ++.+++.+
T Consensus        31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            5788898 77899999999999998 88888765

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=93.64  E-value=0.059  Score=32.24  Aligned_cols=35  Identities=29%  Similarity=0.295  Sum_probs=28.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~   39 (125)
                      |+++ +|+ |.+|.+++..|+.++  .++++++.++...
T Consensus         2 KI~I-IGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~   38 (142)
T d1guza1           2 KITV-IGA-GNVGATTAFRLAEKQLARELVLLDVVEGIP   38 (142)
T ss_dssp             EEEE-ECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHH
T ss_pred             EEEE-ECc-CHHHHHHHHHHHhCCCCceEEEeccccccc
Confidence            5444 585 899999999999987  4899999987654

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=93.53  E-value=0.2  Score=31.01  Aligned_cols=35  Identities=23%  Similarity=0.280  Sum_probs=28.3

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +++|.|+ +=.|++-++...+.|+.|.+++.+.+.+
T Consensus        34 ~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l   68 (168)
T d1pjca1          34 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL   68 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             EEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHH
Confidence            5777774 4568888888889999999999987755

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.51  E-value=0.1  Score=30.32  Aligned_cols=33  Identities=21%  Similarity=0.166  Sum_probs=28.5

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      +.++|.| +|-||..+|..|.+.|.+|.++.|+.
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEech
Confidence            4567777 67899999999999999999998864

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.45  E-value=0.072  Score=31.44  Aligned_cols=37  Identities=19%  Similarity=0.208  Sum_probs=31.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.++|.| +|.+|..+|..|.+.|.+|.++.+.+...
T Consensus        35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~l   71 (133)
T d1q1ra2          35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARVL   71 (133)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccccc
Confidence            46778887 77899999999999999999999986643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.42  E-value=0.062  Score=34.47  Aligned_cols=35  Identities=20%  Similarity=0.212  Sum_probs=29.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      .|.++|.|+ |-.|...|..|+++|++|.++.++..
T Consensus        49 ~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          49 KDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            578899984 55689999999999999999998764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.41  E-value=0.06  Score=32.34  Aligned_cols=35  Identities=17%  Similarity=0.199  Sum_probs=28.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~   37 (125)
                      ||.++|.| +|-.|..+|..|.+.+.  +|+++.+.+.
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~~   38 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNTD   38 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCCc
Confidence            78999999 55679999999999874  7888877653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.38  E-value=0.074  Score=32.98  Aligned_cols=37  Identities=24%  Similarity=0.130  Sum_probs=33.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      ||.++|.|.+.-+|+.++..|.++|+.|..+......
T Consensus        37 GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~   73 (166)
T d1b0aa1          37 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN   73 (166)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC
T ss_pred             cceEEEEeccccccHHHHHHHHHhhccccccccccch
Confidence            8999999999999999999999999999888776543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=93.35  E-value=0.048  Score=35.59  Aligned_cols=31  Identities=23%  Similarity=0.278  Sum_probs=26.4

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.| +|-.|.++|.+|+++|.+|+++.+..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            56676 66789999999999999999998853

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=93.28  E-value=0.049  Score=35.72  Aligned_cols=36  Identities=17%  Similarity=0.146  Sum_probs=30.0

Q ss_pred             CcEEEEecCCcchHHHH-----HHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAI-----LRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~-----a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++.++|+.|-||.|+.+     |..|+++|.+|.+++-+++
T Consensus        19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            56677777799999884     7999999999999998865

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.22  E-value=0.24  Score=29.80  Aligned_cols=23  Identities=39%  Similarity=0.446  Sum_probs=20.9

Q ss_pred             EEEEecCCcchHHHHHHHHHHcC
Q psy7029           4 IIVVTGASVGIGAAILRALAAKG   26 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g   26 (125)
                      ++.|+||+|.+|..++..|+..+
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~   28 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGE   28 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcc
Confidence            68889999999999999999865

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.17  E-value=0.25  Score=32.99  Aligned_cols=33  Identities=24%  Similarity=0.430  Sum_probs=26.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~   37 (125)
                      |+++|-.||+.|+   ++..+++.|+ +|++++.++.
T Consensus        36 ~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~   69 (311)
T d2fyta1          36 DKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI   69 (311)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH
T ss_pred             cCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH
Confidence            6899999999885   5666778886 7999988764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.09  E-value=0.089  Score=32.87  Aligned_cols=35  Identities=37%  Similarity=0.508  Sum_probs=31.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||++.|.| .|.||+.+++.+...|++|+.++|+..
T Consensus        42 gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          42 GEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             TCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CceEEEec-cccccccceeeeecccccccccccccc
Confidence            78899998 566999999999999999999999764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.18  Score=35.62  Aligned_cols=33  Identities=30%  Similarity=0.462  Sum_probs=27.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ..++|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            35788885 7899999999999998 888888753

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.95  E-value=0.071  Score=35.98  Aligned_cols=35  Identities=49%  Similarity=0.503  Sum_probs=29.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      .|.++|.|| |--|..+|..|++.|++|.++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            478888884 55688999999999999999988764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=92.88  E-value=0.082  Score=33.55  Aligned_cols=36  Identities=19%  Similarity=0.348  Sum_probs=31.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      ||++.|.| .|.||+.+++.|...|++|++.++....
T Consensus        43 gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          43 DQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CCeEEEec-ccccchhHHHhHhhhcccccccCccccc
Confidence            68888998 7899999999999999999999887543

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.82  E-value=0.46  Score=27.65  Aligned_cols=38  Identities=21%  Similarity=0.148  Sum_probs=29.3

Q ss_pred             CcEEEEecCCc----------chHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASV----------GIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~----------giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .|.+||.|++.          -.+.+.++.|.+.|++++++..+++..
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTV   51 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETV   51 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSS
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhh
Confidence            36788988753          234467889999999999999988754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.80  E-value=0.083  Score=33.51  Aligned_cols=35  Identities=20%  Similarity=0.339  Sum_probs=30.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||++.|.| .|.||+.+++.|...|++|++.++...
T Consensus        45 ~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          45 QQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ceeeeeee-cccccccccccccccceeeeccCCccc
Confidence            67888888 778999999999999999999998654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.72  E-value=0.07  Score=32.20  Aligned_cols=35  Identities=23%  Similarity=0.265  Sum_probs=29.1

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |..+|  |.|-+|.++++.|.+.|+++++.+|+.+..
T Consensus         2 kIg~I--G~G~mG~al~~~l~~~~~~i~v~~r~~~~~   36 (152)
T d2ahra2           2 KIGII--GVGKMASAIIKGLKQTPHELIISGSSLERS   36 (152)
T ss_dssp             EEEEE--CCSHHHHHHHHHHTTSSCEEEEECSSHHHH
T ss_pred             EEEEE--eccHHHHHHHHHHHhCCCeEEEEcChHHhH
Confidence            55554  477899999999999999999999987654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.64  E-value=0.089  Score=32.50  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=31.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||+++|.| -+-+|+.+|++|...|++|+++..++-
T Consensus        23 Gk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          23 GKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             TSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             CCEEEEec-ccccchhHHHHHHhCCCEEEEEecCch
Confidence            89999998 567999999999999999999999874

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.55  E-value=0.066  Score=35.05  Aligned_cols=36  Identities=19%  Similarity=0.276  Sum_probs=29.7

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |.-.++|.||+ -.|..+|..|++.|.+|.++.+.+.
T Consensus         1 mk~~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           1 MKTQVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             CBCSEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CCCCEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            42258888865 7799999999999999999999764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.55  E-value=0.1  Score=30.53  Aligned_cols=36  Identities=11%  Similarity=0.109  Sum_probs=30.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      .+.++|.| +|-||..+|..|.+.|.+|.++.+.+.-
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            35778887 7789999999999999999999987653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.48  E-value=0.11  Score=31.37  Aligned_cols=37  Identities=24%  Similarity=0.287  Sum_probs=30.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      ++++.|.|+ |.+|..++..|+.++.  ++++++++++..
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~   44 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKA   44 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccc
Confidence            457788896 8899999999999875  799999987653

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.47  E-value=0.075  Score=35.04  Aligned_cols=31  Identities=19%  Similarity=0.396  Sum_probs=26.0

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ++|.| +|-+|.++|.+|+++|. +|.++.++.
T Consensus         4 ViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            66777 56889999999999997 699998864

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.40  E-value=0.068  Score=34.28  Aligned_cols=32  Identities=22%  Similarity=0.326  Sum_probs=25.8

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++|.|+ |--|...|.+|+++|++|.++.+++.
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            566674 55688999999999999999988643

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.16  E-value=0.11  Score=32.76  Aligned_cols=35  Identities=17%  Similarity=0.202  Sum_probs=31.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||++.|.| .|.||+.+++.+...|++|+..++...
T Consensus        49 gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          49 GETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             CceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            68888887 788999999999999999999998754

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=91.81  E-value=1.1  Score=29.56  Aligned_cols=79  Identities=14%  Similarity=0.224  Sum_probs=46.1

Q ss_pred             EEEEecCCcc-hHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVG-IGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      +++-.|+++| |+.+++ +  ...++|++++.++......                           .+.........++
T Consensus       113 ~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A---------------------------~~Na~~~~~~~~~  162 (271)
T d1nv8a_         113 TVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIA---------------------------RKNAERHGVSDRF  162 (271)
T ss_dssp             EEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHH---------------------------HHHHHHTTCTTSE
T ss_pred             EEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHH---------------------------HHHHHHcCCCcee
Confidence            4554566665 444443 2  3467899999998755211                           1222222222256


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .....|+.+.         .....+++|++|.|.-+...
T Consensus       163 ~i~~~~~~~~---------~~~~~~~fDlIVsNPPYI~~  192 (271)
T d1nv8a_         163 FVRKGEFLEP---------FKEKFASIEMILSNPPYVKS  192 (271)
T ss_dssp             EEEESSTTGG---------GGGGTTTCCEEEECCCCBCG
T ss_pred             EEeecccccc---------cccccCcccEEEEcccccCc
Confidence            6677777643         23345789999999887754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=91.81  E-value=0.73  Score=28.72  Aligned_cols=35  Identities=20%  Similarity=0.149  Sum_probs=28.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .++|.| .+-.|.+-++.....|+.|.+++.+....
T Consensus        31 ~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~   65 (183)
T d1l7da1          31 RVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATK   65 (183)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHH
Confidence            567777 44568888888888999999999988765

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.74  E-value=0.14  Score=31.72  Aligned_cols=32  Identities=19%  Similarity=0.373  Sum_probs=26.4

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      +.|.| +|..|.++|..|++.|++|.+.+|..+
T Consensus         3 I~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           3 VSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            34556 578899999999999999999998644

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=91.73  E-value=0.15  Score=31.68  Aligned_cols=33  Identities=24%  Similarity=0.172  Sum_probs=25.4

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC-------eEEEeecCc
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH-------QVIGFARRA   36 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~-------~v~~~~r~~   36 (125)
                      .+.||||+|.+|.+++..|++...       .+.+++...
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~   65 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSER   65 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcc
Confidence            588999999999999999987532       455555544

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.69  E-value=0.13  Score=30.61  Aligned_cols=35  Identities=23%  Similarity=0.256  Sum_probs=27.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      |+++ .|+ |.+|..++..++.++.  ++++++.+++..
T Consensus         2 KI~I-IGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~   38 (140)
T d1a5za1           2 KIGI-VGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRA   38 (140)
T ss_dssp             EEEE-ECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             EEEE-ECc-CHHHHHHHHHHHhCCCCCEEEEEecccccc
Confidence            5555 485 7899999999998874  899999887644

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.65  E-value=0.56  Score=25.93  Aligned_cols=35  Identities=26%  Similarity=0.266  Sum_probs=26.4

Q ss_pred             CcEEEEecCCcchHH-HHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGA-AILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~-~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      .|.+.+.| -+|+|. ++|+.|.++|+.|...++...
T Consensus         8 ~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~   43 (96)
T d1p3da1           8 VQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADG   43 (96)
T ss_dssp             CCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCS
T ss_pred             CCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCC
Confidence            46677777 445564 459999999999999998754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.39  E-value=0.61  Score=28.68  Aligned_cols=35  Identities=20%  Similarity=0.203  Sum_probs=27.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      ..+|=.||+.|   ..+..|+++|++|++++.++...+
T Consensus        32 grvLDiGcG~G---~~~~~la~~g~~v~gvD~s~~~l~   66 (198)
T d2i6ga1          32 GRTLDLGCGNG---RNSLYLAANGYDVTAWDKNPASMA   66 (198)
T ss_dssp             CEEEEETCTTS---HHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CcEEEECCCCC---HHHHHHHHHhhhhccccCcHHHHH
Confidence            36777888766   356788999999999999987654

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=91.33  E-value=0.11  Score=34.45  Aligned_cols=33  Identities=33%  Similarity=0.433  Sum_probs=22.4

Q ss_pred             cEEEE-ecCCcch---HHHHHHHHHHcCCeEEEeecC
Q psy7029           3 KIIVV-TGASVGI---GAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         3 ~~~lI-tG~~~gi---G~~~a~~l~~~g~~v~~~~r~   35 (125)
                      |+++| |||+||-   ..+++++|.++|++|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            34455 4444443   557999999999999877643

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=91.31  E-value=0.52  Score=28.36  Aligned_cols=37  Identities=19%  Similarity=0.153  Sum_probs=29.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      .+++.|.|+ |.+|..++..|+..+. ++++++.++...
T Consensus         7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            356777896 8899999998888884 899999887644

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.06  E-value=0.17  Score=31.49  Aligned_cols=36  Identities=25%  Similarity=0.314  Sum_probs=30.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   38 (125)
                      +|++.|.| .+.||+.+++.+...|++|+..++...+
T Consensus        44 ~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          44 GKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             ceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            67777777 7899999999999999999999987543

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.05  E-value=0.11  Score=34.27  Aligned_cols=34  Identities=26%  Similarity=0.427  Sum_probs=28.3

Q ss_pred             cEEEEecCCcchHHH-----HHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAA-----ILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |++.|.| =||.|+.     ++..|++.|.+|.+++-+++
T Consensus         3 r~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           3 RQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             cEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            7777787 6787776     68889999999999998875

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.04  E-value=0.42  Score=30.33  Aligned_cols=87  Identities=13%  Similarity=0.104  Sum_probs=49.7

Q ss_pred             cEEEEecCCcchHHH-HH---HHHHHc-----CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHH
Q psy7029           3 KIIVVTGASVGIGAA-IL---RALAAK-----GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAM   73 (125)
Q Consensus         3 ~~~lItG~~~giG~~-~a---~~l~~~-----g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (125)
                      -+.+|.||+|-+.+- +.   -.|...     +..++.++|++-..+.   +..    ...   ............++..
T Consensus        21 ~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~---fr~----~~~---~~~~~~~~~~~~~~~f   90 (203)
T d1qkia1          21 HIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVAD---IRK----QSE---PFFKATPEEKLKLEDF   90 (203)
T ss_dssp             EEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHH---HHH----HHS---CCTTCCGGGHHHHHHH
T ss_pred             cEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHH---HHH----HHH---HHHhhchhhHHHHHHH
Confidence            367899999988765 11   222333     4689999998643311   111    111   1111111222333343


Q ss_pred             hhcCCCceeeEEEecCCChHHHHHHHHHHHh
Q psy7029          74 AKENPDWKVHSLKVDVTKDAEVVEAFDWINN  104 (125)
Q Consensus        74 ~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  104 (125)
                      ..     ++.++.+|+.++++..++-+.+.+
T Consensus        91 ~~-----~~~Y~~~d~~~~~~~~~L~~~l~~  116 (203)
T d1qkia1          91 FA-----RNSYVAGQYDDAASYQRLNSHMNA  116 (203)
T ss_dssp             HT-----TEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             HH-----hhccccCcCCChhhHHHHHHHHHH
Confidence            32     678889999999998888776654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.86  E-value=0.18  Score=32.65  Aligned_cols=33  Identities=24%  Similarity=0.275  Sum_probs=26.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      +.++|.|+ |--|+..|.+|++.|++|.++..+.
T Consensus         6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            45778884 4558899999999999999997654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=90.63  E-value=0.33  Score=30.60  Aligned_cols=35  Identities=20%  Similarity=0.317  Sum_probs=25.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |+++|=.||++|+   ++..++..|+ +|+.++.++...
T Consensus        49 Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~   84 (197)
T d1ne2a_          49 GRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAI   84 (197)
T ss_dssp             TSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHH
T ss_pred             CCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHH
Confidence            7888889998872   3345666775 699999887644

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.51  E-value=0.87  Score=28.66  Aligned_cols=38  Identities=13%  Similarity=0.258  Sum_probs=26.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.++|-.|+++|--....-++......|+.++.+++..
T Consensus        76 g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~  113 (213)
T d1dl5a1          76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKIC  113 (213)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHH
T ss_pred             cceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhH
Confidence            56888899888755554444444556899999987755

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.46  E-value=0.88  Score=27.14  Aligned_cols=23  Identities=26%  Similarity=0.378  Sum_probs=20.4

Q ss_pred             EEEEecCCcchHHHHHHHHHHcC
Q psy7029           4 IIVVTGASVGIGAAILRALAAKG   26 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g   26 (125)
                      ++.|+||+|.+|.+++..|++.+
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHHHH
Confidence            67889999999999999998764

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.44  E-value=0.49  Score=34.28  Aligned_cols=32  Identities=19%  Similarity=0.251  Sum_probs=26.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecC
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARR   35 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~   35 (125)
                      ..++|.|+ +|+|..+++.|+..|. ++.+++.+
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            46788885 7899999999999997 78887765

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=90.42  E-value=0.72  Score=28.76  Aligned_cols=35  Identities=14%  Similarity=0.283  Sum_probs=27.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.+|=.||+.|   ..+..|++.|++|++++.++...
T Consensus        16 ~~rVLDiGcG~G---~~~~~l~~~~~~v~gvD~s~~~i   50 (231)
T d1vl5a_          16 NEEVLDVATGGG---HVANAFAPFVKKVVAFDLTEDIL   50 (231)
T ss_dssp             CCEEEEETCTTC---HHHHHHGGGSSEEEEEESCHHHH
T ss_pred             cCEEEEecccCc---HHHHHHHHhCCEEEEEECCHHHH
Confidence            457788898888   34567888999999999987654

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=90.41  E-value=0.16  Score=33.42  Aligned_cols=31  Identities=29%  Similarity=0.401  Sum_probs=26.1

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.| ++..|...|..|+++|.+|+++.+..
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            56777 66778999999999999999998754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.37  E-value=0.16  Score=31.65  Aligned_cols=34  Identities=24%  Similarity=0.167  Sum_probs=27.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+++| | .|-+|..+|..|+ .|++|++++-++...
T Consensus         2 kI~Vi-G-lG~vGl~~a~~~a-~g~~V~g~Din~~~v   35 (196)
T d1dlja2           2 KIAVA-G-SGYVGLSLGVLLS-LQNEVTIVDILPSKV   35 (196)
T ss_dssp             EEEEE-C-CSHHHHHHHHHHT-TTSEEEEECSCHHHH
T ss_pred             EEEEE-C-CChhHHHHHHHHH-CCCcEEEEECCHHHH
Confidence            66666 5 7899999998775 699999999887643

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=90.31  E-value=0.72  Score=27.40  Aligned_cols=33  Identities=24%  Similarity=0.205  Sum_probs=27.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC--eEEEeecCc
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH--QVIGFARRA   36 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~   36 (125)
                      ++-|+|++|.+|.+++..++.++.  ++++++...
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~   36 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPD   36 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGG
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCC
Confidence            467899999999999999999875  788888643

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.30  E-value=0.81  Score=30.50  Aligned_cols=33  Identities=27%  Similarity=0.440  Sum_probs=25.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~   37 (125)
                      |+++|-.||+.|+   ++..+++.|+ +|++++.++.
T Consensus        34 ~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~   67 (316)
T d1oria_          34 DKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI   67 (316)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT
T ss_pred             cCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH
Confidence            7889999998884   4566778886 6999987753

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=90.28  E-value=0.23  Score=29.79  Aligned_cols=36  Identities=22%  Similarity=0.328  Sum_probs=29.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      |++.|+|+ |.+|..++..|+.+|.  ++++++.++...
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~   39 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKV   39 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence            56778895 8899999999999874  899999887643

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=90.26  E-value=1.1  Score=29.20  Aligned_cols=36  Identities=14%  Similarity=0.270  Sum_probs=28.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      |+++|=.||++|+   ++..+++.|++|+.++.++....
T Consensus       121 g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~  156 (254)
T d2nxca1         121 GDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLP  156 (254)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHH
T ss_pred             cCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHH
Confidence            6788889999885   33456778999999999988663

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.17  E-value=0.32  Score=30.52  Aligned_cols=78  Identities=23%  Similarity=0.291  Sum_probs=46.8

Q ss_pred             EecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeEEE
Q psy7029           7 VTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLK   86 (125)
Q Consensus         7 ItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (125)
                      +|-|+||....+.+.+ . +.+|++++++++.....                            +.....+. .++.++.
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a----------------------------~~~l~~~~-~r~~~~~   78 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIA----------------------------EEKLKEFS-DRVSLFK   78 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHH----------------------------HHHTGGGT-TTEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHH----------------------------HHhhcccc-ccccchh
Confidence            3566777777777765 3 46999999998765211                            11112222 2677888


Q ss_pred             ecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          87 VDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        87 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+..+...   .+...  ..+.+|+++..-|++.
T Consensus        79 ~~f~~~~~---~~~~~--~~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          79 VSYREADF---LLKTL--GIEKVDGILMDLGVST  107 (192)
T ss_dssp             CCGGGHHH---HHHHT--TCSCEEEEEEECSCCH
T ss_pred             HHHhhHHH---HHHHc--CCCCcceeeeccchhH
Confidence            76665433   22221  1357888888777753

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.09  E-value=0.19  Score=33.03  Aligned_cols=31  Identities=29%  Similarity=0.352  Sum_probs=25.3

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.|+ |--|.+.|..|+++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            466774 4558899999999999999998754

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.07  E-value=0.49  Score=29.98  Aligned_cols=35  Identities=23%  Similarity=0.384  Sum_probs=28.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .+++|=.||+.|   ..+..|++.|++|++++.++...
T Consensus        42 ~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi   76 (251)
T d1wzna1          42 VRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEML   76 (251)
T ss_dssp             CCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEeCCCCC---ccchhhcccceEEEEEeeccccc
Confidence            356888899887   45667889999999999997655

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.06  E-value=0.2  Score=33.34  Aligned_cols=34  Identities=21%  Similarity=0.235  Sum_probs=27.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      .-++|.| +|--|..+|+.|++.|.+|.++.++..
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            4577888 456688999999999999999988654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.99  E-value=0.2  Score=31.07  Aligned_cols=31  Identities=16%  Similarity=0.289  Sum_probs=24.6

Q ss_pred             EEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      ++|.| +|--|.+.|..|+++|+ +|.++.++.
T Consensus         3 V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           3 VIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             EEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            56777 44558899999999997 699998764

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.67  E-value=1.3  Score=26.92  Aligned_cols=35  Identities=26%  Similarity=0.410  Sum_probs=25.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.++|=.||+.|   .++..|++.+.+|+.++.++...
T Consensus        34 g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l   68 (186)
T d1l3ia_          34 NDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAI   68 (186)
T ss_dssp             TCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHH
T ss_pred             CCEEEEEECCeE---cccccccccceEEEEecCCHHHH
Confidence            455666788776   34456677788999999998755

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=89.61  E-value=0.22  Score=31.97  Aligned_cols=32  Identities=22%  Similarity=0.257  Sum_probs=26.3

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++|.| +|.-|...|..|+++|.+|+++.+++.
T Consensus         7 ViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            67777 455678889999999999999998764

>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=89.56  E-value=0.18  Score=31.41  Aligned_cols=32  Identities=28%  Similarity=0.389  Sum_probs=24.8

Q ss_pred             CcEEEEecCCcchHHH-HHHHHHHcCCeEEEeec
Q psy7029           2 SKIIVVTGASVGIGAA-ILRALAAKGHQVIGFAR   34 (125)
Q Consensus         2 ~~~~lItG~~~giG~~-~a~~l~~~g~~v~~~~r   34 (125)
                      |+-++|+| .+|.|++ ++.+|.++|+.++.-++
T Consensus        15 g~gvli~G-~sG~GKS~lal~l~~~G~~lvaDD~   47 (177)
T d1knxa2          15 GVGVLLTG-RSGIGKSECALDLINKNHLFVGDDA   47 (177)
T ss_dssp             TEEEEEEE-SSSSSHHHHHHHHHTTTCEEEEEEE
T ss_pred             CEEEEEEc-CCCCCHHHHHHHHHHcCCceecCCe
Confidence            56677787 6677886 88999999998776554

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=89.16  E-value=0.33  Score=31.47  Aligned_cols=37  Identities=14%  Similarity=0.236  Sum_probs=31.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |++++|-| .|-+|..+++.|.+.|++|++++.+....
T Consensus        39 g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~   75 (230)
T d1leha1          39 GLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAV   75 (230)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHH
Confidence            67777777 77899999999999999999998876543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.04  E-value=0.25  Score=31.29  Aligned_cols=36  Identities=19%  Similarity=0.219  Sum_probs=27.9

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |.-=++|.|+ +--|...|..|++.|++|+++.+...
T Consensus         1 M~yDViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           1 MHYDVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CcCCEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3334677774 45688899999999999999998754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.80  E-value=0.35  Score=30.06  Aligned_cols=35  Identities=23%  Similarity=0.148  Sum_probs=30.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++++.|.| .|.||+.+++.|...|++|+..++...
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d2naca1          44 AMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRL   78 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred             ccceeecc-ccccchhhhhhhhccCceEEEEeeccc
Confidence            56777777 778999999999999999999998643

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=88.79  E-value=0.24  Score=32.97  Aligned_cols=31  Identities=29%  Similarity=0.414  Sum_probs=25.8

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.| ++.-|...|..|+++|++|+++.+.+
T Consensus        26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEEC-SSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            46666 56678999999999999999998754

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.68  E-value=0.32  Score=32.50  Aligned_cols=35  Identities=34%  Similarity=0.421  Sum_probs=26.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC--CeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG--HQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g--~~v~~~~r~~~   37 (125)
                      .|.++|.||+ --|..+|..|+++|  .+|+++.|+..
T Consensus         4 ~KrVaIIGaG-~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAIIGAG-PSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCeEEEECcC-HHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            4778888854 34667888888876  58999998754

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.59  E-value=0.43  Score=28.57  Aligned_cols=35  Identities=9%  Similarity=0.154  Sum_probs=25.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcC----CeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKG----HQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g----~~v~~~~r~~   36 (125)
                      ||.+-|.||||-.|+.+.+.|+++.    ..+.+..++.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            2566778999999999999887653    3566665543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=88.41  E-value=0.37  Score=30.14  Aligned_cols=35  Identities=17%  Similarity=0.182  Sum_probs=30.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |+++.|.| .|.||+.+++.+...|++++..++...
T Consensus        47 g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          47 NKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence            67888888 788999999999999999999988654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.37  E-value=1.1  Score=28.33  Aligned_cols=79  Identities=24%  Similarity=0.294  Sum_probs=48.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCce
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWK   81 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (125)
                      |..+|-.|+++|--.++.-.|.  |.+|+.+.+++......                           .+.+. ..+-.+
T Consensus        79 g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a---------------------------~~~l~-~~g~~n  128 (215)
T d1jg1a_          79 GMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFA---------------------------KRNLE-RAGVKN  128 (215)
T ss_dssp             TCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHH---------------------------HHHHH-HTTCCS
T ss_pred             cceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHH---------------------------HHHHH-HcCCce
Confidence            5678889998887777666665  46799999887644211                           12222 122236


Q ss_pred             eeEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          82 VHSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        82 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      +.++..|..+.          ....++.|.++.++++..
T Consensus       129 v~~~~gd~~~g----------~~~~~pfD~Iiv~~a~~~  157 (215)
T d1jg1a_         129 VHVILGDGSKG----------FPPKAPYDVIIVTAGAPK  157 (215)
T ss_dssp             EEEEESCGGGC----------CGGGCCEEEEEECSBBSS
T ss_pred             eEEEECccccC----------CcccCcceeEEeeccccc
Confidence            77777776531          112357888887777653

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.25  E-value=0.71  Score=27.48  Aligned_cols=33  Identities=24%  Similarity=0.314  Sum_probs=26.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHc-C--CeEEEeecCc
Q psy7029           4 IIVVTGASVGIGAAILRALAAK-G--HQVIGFARRA   36 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~-g--~~v~~~~r~~   36 (125)
                      ++.|+|++|.+|.+++..|+.+ +  .++.+++..+
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~   37 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP   37 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc
Confidence            4568999999999999988654 4  5899998754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.23  E-value=0.3  Score=29.37  Aligned_cols=33  Identities=18%  Similarity=0.094  Sum_probs=25.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      ++.++|.| +|.+|..++..|.+.|.++.++.+.
T Consensus         3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEec
Confidence            35677777 7789999999999999876555443

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.21  E-value=0.43  Score=29.61  Aligned_cols=35  Identities=17%  Similarity=0.115  Sum_probs=30.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++++.|.| .|.||+.+++.+...|++|+..++...
T Consensus        44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          44 GKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence            56778886 789999999999999999999998654

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=88.21  E-value=0.15  Score=31.09  Aligned_cols=33  Identities=18%  Similarity=0.126  Sum_probs=25.2

Q ss_pred             CCcEEEEecCCcchHHHHHHHHHHcCCeEEEeec
Q psy7029           1 MSKIIVVTGASVGIGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         1 ~~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r   34 (125)
                      |...++|.| +|.+|..+|..|.+.|.++.++.+
T Consensus         2 m~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           2 LKAPVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CCSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            555678888 678899999999999976555444

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=88.09  E-value=0.45  Score=28.22  Aligned_cols=36  Identities=25%  Similarity=0.198  Sum_probs=28.8

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |++-|.|+ |.+|.+++..|+.++. ++++++.+++..
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~   38 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVP   38 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccc
Confidence            45666785 8899999999998875 899999877643

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=88.06  E-value=0.29  Score=32.98  Aligned_cols=29  Identities=24%  Similarity=0.116  Sum_probs=24.4

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeec
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r   34 (125)
                      |+|.| +|.-|..+|.+|++.|.+|+++.+
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence            56666 555688999999999999999987

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.98  E-value=1.9  Score=26.72  Aligned_cols=35  Identities=23%  Similarity=0.304  Sum_probs=24.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      |+++|=.||+.|   .++..++.+|+ +|++++.++...
T Consensus        47 g~~vLDlg~GtG---~l~i~a~~~g~~~v~~vdi~~~~~   82 (201)
T d1wy7a1          47 GKVVADLGAGTG---VLSYGALLLGAKEVICVEVDKEAV   82 (201)
T ss_dssp             TCEEEEETCTTC---HHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             CCEEEECcCcch---HHHHHHHHcCCCEEEEEcCcHHHH
Confidence            567777888766   23334556775 899999987654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=87.40  E-value=0.6  Score=28.38  Aligned_cols=37  Identities=16%  Similarity=0.173  Sum_probs=30.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      .+++-|.|+ |.+|..++..|+.+|.  ++++++++++..
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            356777885 8899999999999986  899999986544

>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Staphylococcus xylosus [TaxId: 1288]

Probab=87.39  E-value=0.26  Score=30.39  Aligned_cols=30  Identities=27%  Similarity=0.503  Sum_probs=23.2

Q ss_pred             CcEEEEecCCcchHHH-HHHHHHHcCCeEEEe
Q psy7029           2 SKIIVVTGASVGIGAA-ILRALAAKGHQVIGF   32 (125)
Q Consensus         2 ~~~~lItG~~~giG~~-~a~~l~~~g~~v~~~   32 (125)
                      |+-++|+| -+|.|++ ++.+|.++|+.++.-
T Consensus        15 g~gvli~G-~sg~GKS~la~~l~~~g~~li~D   45 (169)
T d1ko7a2          15 GVGVLITG-DSGIGKSETALELIKRGHRLVAD   45 (169)
T ss_dssp             TEEEEEEE-STTSSHHHHHHHHHHTTCEEEES
T ss_pred             CEEEEEEe-CCCCCHHHHHHHHHHcCCeEEeC
Confidence            56788888 5677886 888999999876553

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=87.37  E-value=0.51  Score=30.03  Aligned_cols=36  Identities=14%  Similarity=0.084  Sum_probs=29.4

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      ++.+|=.||+.|.   ++..|++.|.+|++++.++....
T Consensus        38 ~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~   73 (246)
T d1y8ca_          38 FDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLS   73 (246)
T ss_dssp             TTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHH
T ss_pred             CCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhh
Confidence            4678889998884   67788999999999999987653

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.24  E-value=0.5  Score=28.07  Aligned_cols=35  Identities=11%  Similarity=0.060  Sum_probs=27.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      |+.+ .|+ |.+|.+++..|+.++.  ++++++.+++..
T Consensus         2 KI~I-IGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~   38 (142)
T d1ojua1           2 KLGF-VGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLA   38 (142)
T ss_dssp             EEEE-ECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHH
T ss_pred             EEEE-ECc-CHHHHHHHHHHHhcCcCceEEEEecccchh
Confidence            5554 585 8899999999998874  799999887654

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=87.19  E-value=0.36  Score=32.22  Aligned_cols=29  Identities=31%  Similarity=0.508  Sum_probs=24.2

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeec
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r   34 (125)
                      ++|.|++ .-|..+|.+|++.|.+|+++.+
T Consensus         7 viIVGsG-~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGSG-PIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECcC-HHHHHHHHHHhhCCCeEEEEec
Confidence            5777744 4489999999999999999976

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=87.16  E-value=1.9  Score=25.80  Aligned_cols=32  Identities=19%  Similarity=0.390  Sum_probs=25.9

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc--CCeEEEeec
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK--GHQVIGFAR   34 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r   34 (125)
                      |.+.|.|+||.||.+...-+.+.  .++|+.+.-
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            88999999999999998877765  467766543

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.12  E-value=0.34  Score=32.18  Aligned_cols=31  Identities=23%  Similarity=0.248  Sum_probs=25.8

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.| ++..|...|..++++|.+|+++.+..
T Consensus        22 VvVIG-aG~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          22 VLVVG-AGSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            56666 66778999999999999999998753

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.95  E-value=0.38  Score=29.97  Aligned_cols=32  Identities=19%  Similarity=0.237  Sum_probs=26.1

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++|.|+ +.-|...|..+++.|.+|+++.+...
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence            567775 45599999999999999999987643

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.88  E-value=1.6  Score=24.72  Aligned_cols=35  Identities=31%  Similarity=0.491  Sum_probs=29.4

Q ss_pred             cEEEEecCC---cchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           3 KIIVVTGAS---VGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~---~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      |.+.|.|++   +-.|..+.+.|.+.|++|+.+..+.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~   39 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYD   39 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccc
Confidence            678899987   45899999999999999999876543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=86.69  E-value=0.48  Score=30.80  Aligned_cols=32  Identities=22%  Similarity=0.295  Sum_probs=27.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r   34 (125)
                      |++++|-| .|-+|..+++.|.+.|++|+.++-
T Consensus        31 g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          31 GKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            67888776 788999999999999999987664

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=86.67  E-value=0.49  Score=28.06  Aligned_cols=34  Identities=18%  Similarity=0.174  Sum_probs=26.2

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEM   38 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~   38 (125)
                      ++.|.|+ |.+|..++..++.++.  ++++++++++.
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            4556686 9999999999999875  79999988764

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.53  E-value=1.8  Score=25.75  Aligned_cols=29  Identities=14%  Similarity=0.252  Sum_probs=24.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEE
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVI   30 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~   30 (125)
                      |+.+.|.+.++|.|.-.+..+.+.|.++-
T Consensus         3 G~rvaiit~sGG~~~l~aD~~~~~Gl~l~   31 (163)
T d2csua3           3 GNKVAIMTNAGGPGVLTADELDKRGLKLA   31 (163)
T ss_dssp             SSEEEEEESCHHHHHHHHHHHHTTTCEEC
T ss_pred             CCeEEEEECChHHHHHHHHHHHHcCCccC
Confidence            67777778899999999999999997764

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=86.49  E-value=1.3  Score=27.82  Aligned_cols=35  Identities=23%  Similarity=0.331  Sum_probs=28.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+++|=.||+.|   .++..|++.+.+|+.++.+....
T Consensus        17 ~~rILDiGcGtG---~~~~~la~~~~~v~gvD~S~~~l   51 (234)
T d1xxla_          17 EHRVLDIGAGAG---HTALAFSPYVQECIGVDATKEMV   51 (234)
T ss_dssp             TCEEEEESCTTS---HHHHHHGGGSSEEEEEESCHHHH
T ss_pred             CCEEEEeCCcCc---HHHHHHHHhCCeEEEEeCChhhh
Confidence            567888999888   55667788899999999987755

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=86.40  E-value=1.9  Score=28.39  Aligned_cols=77  Identities=16%  Similarity=0.181  Sum_probs=46.4

Q ss_pred             EEEEecCCcc-hHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCcee
Q psy7029           4 IIVVTGASVG-IGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKV   82 (125)
Q Consensus         4 ~~lItG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (125)
                      .++=.|+++| |+.+++..+  ...+|++++.++.......                           +... .++-.++
T Consensus       111 ~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~---------------------------~Na~-~~~~~~v  160 (274)
T d2b3ta1         111 RILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQ---------------------------RNAQ-HLAIKNI  160 (274)
T ss_dssp             EEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHH---------------------------HHHH-HHTCCSE
T ss_pred             ceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHH---------------------------HHHH-HhCcccc
Confidence            3444666554 666666543  3469999999877552111                           1111 1122258


Q ss_pred             eEEEecCCChHHHHHHHHHHHhhcCCccEEEeCcccCCC
Q psy7029          83 HSLKVDVTKDAEVVEAFDWINNKFGHIDVMINNAGVNEF  121 (125)
Q Consensus        83 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nag~~~~  121 (125)
                      .+++.|+.+.-           ...++|++|.|.-+...
T Consensus       161 ~~~~~d~~~~~-----------~~~~fDlIvsNPPYi~~  188 (274)
T d2b3ta1         161 HILQSDWFSAL-----------AGQQFAMIVSNPPYIDE  188 (274)
T ss_dssp             EEECCSTTGGG-----------TTCCEEEEEECCCCBCT
T ss_pred             eeeeccccccc-----------CCCceeEEEecchhhhh
Confidence            88899886542           12479999999887654

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.22  E-value=0.38  Score=30.20  Aligned_cols=31  Identities=19%  Similarity=0.318  Sum_probs=25.4

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.|++.+ |...|.++++.|.+|.++.+.+
T Consensus         6 viVIG~Gpa-Gl~aA~~aa~~G~kV~viE~~~   36 (235)
T d1h6va1           6 LIIIGGGSG-GLAAAKEAAKFDKKVMVLDFVT   36 (235)
T ss_dssp             EEEECCSHH-HHHHHHHHGGGCCCEEEECCCC
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEeccC
Confidence            567775544 8999999999999999998643

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=86.21  E-value=1.6  Score=26.00  Aligned_cols=36  Identities=25%  Similarity=0.285  Sum_probs=28.2

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   39 (125)
                      .++-|.|+ |.+|..++..|+.++. +++++++++...
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            35667785 8999999988887774 899999877644

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=86.16  E-value=1.9  Score=27.47  Aligned_cols=35  Identities=14%  Similarity=0.222  Sum_probs=25.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |.++|-.|+++|--   +..|++.+.+|+.+..++...
T Consensus        71 g~~VLdIG~GsGy~---ta~La~l~~~V~aiE~~~~~~  105 (224)
T d1vbfa_          71 GQKVLEIGTGIGYY---TALIAEIVDKVVSVEINEKMY  105 (224)
T ss_dssp             TCEEEEECCTTSHH---HHHHHHHSSEEEEEESCHHHH
T ss_pred             cceEEEecCCCCHH---HHHHHHHhcccccccccHHHH
Confidence            56788899888843   334666678999999887654

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.93  E-value=2.1  Score=26.15  Aligned_cols=34  Identities=24%  Similarity=0.296  Sum_probs=27.4

Q ss_pred             cEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           3 KIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .++|=.||+.|.   ++..|++.|++|++++.+....
T Consensus        39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i   72 (226)
T d1ve3a1          39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMI   72 (226)
T ss_dssp             CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHH
T ss_pred             CEEEEECCCcch---hhhhHhhhhcccccccccccch
Confidence            357889998884   6678888999999999987655

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=85.87  E-value=0.74  Score=28.91  Aligned_cols=35  Identities=14%  Similarity=0.138  Sum_probs=27.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      ++.+|=.||+.|   .+++.|++.|++|++++.++...
T Consensus        21 ~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i   55 (225)
T d2p7ia1          21 PGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAI   55 (225)
T ss_dssp             SSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHH
T ss_pred             CCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHh
Confidence            456777888877   55778899999999999987654

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.78  E-value=0.44  Score=33.31  Aligned_cols=31  Identities=23%  Similarity=0.359  Sum_probs=24.7

Q ss_pred             cEEEEecC------CcchH---HHHHHHHHHcCCeEEEee
Q psy7029           3 KIIVVTGA------SVGIG---AAILRALAAKGHQVIGFA   33 (125)
Q Consensus         3 ~~~lItG~------~~giG---~~~a~~l~~~g~~v~~~~   33 (125)
                      |++.||.-      +||+|   .++++.|+++|++|.++.
T Consensus         2 ~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_           2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             EEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            77788753      57877   667899999999998875

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=85.72  E-value=1.3  Score=27.35  Aligned_cols=73  Identities=15%  Similarity=0.235  Sum_probs=41.2

Q ss_pred             CCcchHHHHHHHHHHcCCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCceeeEEEecC
Q psy7029          10 ASVGIGAAILRALAAKGHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDWKVHSLKVDV   89 (125)
Q Consensus        10 ~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   89 (125)
                      ||-|-|-+ .+.+++++.+|++++|++....                               ...... ..++.++..+.
T Consensus        25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~-------------------------------~a~~~~-~~~~~~~~~~f   71 (182)
T d1wg8a2          25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVA-------------------------------RAKGLH-LPGLTVVQGNF   71 (182)
T ss_dssp             TTCTTSHH-HHHHHHTTCEEEEEESCHHHHH-------------------------------HHHHTC-CTTEEEEESCG
T ss_pred             eCCCCcHH-HHHHhcccCcEEEEhhhhhHHH-------------------------------HHhhcc-ccceeEeehHH
Confidence            34343434 3555666779999999986541                               111111 22577777766


Q ss_pred             CChHHHHHHHHHHHhhcCCccEEEeCcccCC
Q psy7029          90 TKDAEVVEAFDWINNKFGHIDVMINNAGVNE  120 (125)
Q Consensus        90 ~~~~~v~~~~~~~~~~~g~id~lv~nag~~~  120 (125)
                      .+.+.   .+...  ..+.+|+++..-|++.
T Consensus        72 ~~~~~---~l~~~--~~~~vdgIl~DLGvSs   97 (182)
T d1wg8a2          72 RHLKR---HLAAL--GVERVDGILADLGVSS   97 (182)
T ss_dssp             GGHHH---HHHHT--TCSCEEEEEEECSCCH
T ss_pred             HHHHH---HHHHc--CCCccCEEEEEccCCH
Confidence            65333   33322  1357888887777654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.72  E-value=0.53  Score=30.87  Aligned_cols=32  Identities=16%  Similarity=0.274  Sum_probs=27.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeec
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r   34 (125)
                      |++++|.| .|-+|+.+++.|.+.|++|+.+.-
T Consensus        36 g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          36 GKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            68888888 677999999999999999987753

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.62  E-value=0.093  Score=33.07  Aligned_cols=25  Identities=28%  Similarity=0.339  Sum_probs=20.1

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeE
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQV   29 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v   29 (125)
                      .++|.| +|-+|.++|..|+++|++|
T Consensus         2 kV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           2 RVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             EEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            366676 6678999999999999754

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=85.56  E-value=0.78  Score=27.24  Aligned_cols=35  Identities=23%  Similarity=0.297  Sum_probs=28.4

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      ++.|.|+ |.+|.+++..|+.++.  ++++++.++...
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~   39 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERV   39 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence            3556686 8899999999999885  899999887643

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=85.54  E-value=0.53  Score=29.15  Aligned_cols=31  Identities=16%  Similarity=0.175  Sum_probs=25.9

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.|+ |..|...|.++++.|.+|.++.+..
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            467774 6679999999999999999998753

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=85.50  E-value=1.9  Score=24.20  Aligned_cols=36  Identities=14%  Similarity=0.206  Sum_probs=29.0

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||++||.=...-+...+...|-+.|+.|+....+..
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~   36 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGR   36 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHH
Confidence            788999988888888888888888999876655543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.50  E-value=0.64  Score=31.17  Aligned_cols=33  Identities=21%  Similarity=0.312  Sum_probs=27.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      |++++|-| .|-+|..+++.|.+.|++|+.++-+
T Consensus        36 gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          36 DKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            57888777 6789999999999999999987643

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=85.40  E-value=0.47  Score=31.95  Aligned_cols=29  Identities=21%  Similarity=0.051  Sum_probs=24.0

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeec
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r   34 (125)
                      ++|.|+ |--|..+|.+|++.|.+|+++.+
T Consensus        10 vIVVGs-G~aG~v~A~rLaeaG~~VlvLEa   38 (370)
T d3coxa1          10 ALVIGS-GYGGAVAALRLTQAGIPTQIVEM   38 (370)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeC
Confidence            567774 45688999999999999999986

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.39  E-value=2.6  Score=28.00  Aligned_cols=32  Identities=31%  Similarity=0.479  Sum_probs=24.9

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~   36 (125)
                      |+++|-.||+.|+   ++..+++.|+ +|++++.++
T Consensus        39 ~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~   71 (328)
T d1g6q1_          39 DKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS   71 (328)
T ss_dssp             TCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST
T ss_pred             cCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH
Confidence            6889999998883   4556778886 788888764

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=85.38  E-value=0.5  Score=31.40  Aligned_cols=32  Identities=16%  Similarity=0.105  Sum_probs=24.8

Q ss_pred             cEEEEecCCcch---HHHHHHHHHHcCCeEEEeec
Q psy7029           3 KIIVVTGASVGI---GAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         3 ~~~lItG~~~gi---G~~~a~~l~~~g~~v~~~~r   34 (125)
                      |+++.++||+|-   =.+++++|+++|++|.++..
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            777778877653   23489999999999998874

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.35  E-value=2.8  Score=27.70  Aligned_cols=83  Identities=16%  Similarity=0.196  Sum_probs=44.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc-C-CeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK-G-HQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.+||.|++.|   .+++++++. + .++.++..++.-.......+.....  ...+.+..-.-.+.  .+.+... ...
T Consensus        82 k~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~--~~~~~r~~i~~~Da--~~~l~~~-~~~  153 (290)
T d1xj5a_          82 KKVLVIGGGDG---GVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAI--GYEDPRVNLVIGDG--VAFLKNA-AEG  153 (290)
T ss_dssp             CEEEEETCSSS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHG--GGGSTTEEEEESCH--HHHHHTS-CTT
T ss_pred             cceEEecCCch---HHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhc--cccCCCcEEEEccH--HHHHhhc-ccc
Confidence            67999998887   567777776 3 3788888887755444444333222  12222222111111  1222221 122


Q ss_pred             eeeEEEecCCChH
Q psy7029          81 KVHSLKVDVTKDA   93 (125)
Q Consensus        81 ~~~~~~~Dv~~~~   93 (125)
                      +.-.+..|+.|+.
T Consensus       154 ~yDvIi~D~~dp~  166 (290)
T d1xj5a_         154 SYDAVIVDSSDPI  166 (290)
T ss_dssp             CEEEEEECCCCTT
T ss_pred             CccEEEEcCCCCC
Confidence            5667777888763

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.18  E-value=0.55  Score=29.02  Aligned_cols=31  Identities=19%  Similarity=0.213  Sum_probs=25.8

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.|+ +..|...|..+++.|.+|+++.+..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            567775 4569999999999999999998754

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=85.00  E-value=0.56  Score=28.92  Aligned_cols=31  Identities=23%  Similarity=0.128  Sum_probs=25.5

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.|+ |..|...|..+++.|.+|.++.+..
T Consensus         6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            567775 4459999999999999999998754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.88  E-value=1  Score=26.85  Aligned_cols=35  Identities=14%  Similarity=0.097  Sum_probs=26.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCe-EEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQ-VIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~-v~~~~r~~~   37 (125)
                      ++.++|.| +|-.|...|..+.+.|++ |.++.|...
T Consensus        45 ~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~~   80 (153)
T d1gtea3          45 RGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKGF   80 (153)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred             CCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence            45677776 566788999999999984 777777653

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=84.82  E-value=0.55  Score=30.16  Aligned_cols=31  Identities=26%  Similarity=0.374  Sum_probs=25.5

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.|++.+ |+..|.++++.|.+|.++.+..
T Consensus         4 viVIG~G~a-G~~aA~~aa~~G~~V~liE~~~   34 (259)
T d1onfa1           4 LIVIGGGSG-GMAAARRAARHNAKVALVEKSR   34 (259)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEecCC
Confidence            467775544 9999999999999999998753

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.81  E-value=0.74  Score=29.11  Aligned_cols=33  Identities=27%  Similarity=0.204  Sum_probs=25.5

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC-eEEEeecCch
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH-QVIGFARRAE   37 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~   37 (125)
                      .++|.|| |--|..+|..|.+.|. .|.++.+++.
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            4677774 4558888999999996 8889888754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.59  E-value=0.6  Score=31.04  Aligned_cols=33  Identities=24%  Similarity=0.176  Sum_probs=26.3

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      -++|.|| |--|..++..|.+.|.+++++.+..+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            3677774 45578888999999999999988754

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=84.57  E-value=0.54  Score=31.07  Aligned_cols=31  Identities=23%  Similarity=0.114  Sum_probs=25.5

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.| +|.-|...|.+++++|.+|+++....
T Consensus         8 VvVIG-~G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIG-GGLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEecCC
Confidence            56777 56678889999999999999997753

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.53  E-value=0.78  Score=27.80  Aligned_cols=35  Identities=20%  Similarity=0.257  Sum_probs=28.6

Q ss_pred             EEEEecCCcchHHHHHHHHHHcCC--eEEEeecCchhh
Q psy7029           4 IIVVTGASVGIGAAILRALAAKGH--QVIGFARRAEMI   39 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~   39 (125)
                      ++.|.|+ |.+|..++..|+.+|.  ++++++++++..
T Consensus        21 KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a   57 (159)
T d2ldxa1          21 KITVVGV-GDVGMACAISILLKGLADELALVDADTDKL   57 (159)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhh
Confidence            4666785 8899999999999875  799999887543

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.38  E-value=2.4  Score=24.43  Aligned_cols=35  Identities=29%  Similarity=0.325  Sum_probs=28.4

Q ss_pred             cEEEEecCC---cchHHHHHHHHHHcC-CeEEEeecCch
Q psy7029           3 KIIVVTGAS---VGIGAAILRALAAKG-HQVIGFARRAE   37 (125)
Q Consensus         3 ~~~lItG~~---~giG~~~a~~l~~~g-~~v~~~~r~~~   37 (125)
                      |++.|.|++   +..|..+.+.|.+.| .+|+.+.....
T Consensus         9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~   47 (129)
T d2csua1           9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEE   47 (129)
T ss_dssp             SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCS
T ss_pred             CeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcc
Confidence            688899998   678999999987765 58999887654

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.31  E-value=0.58  Score=28.86  Aligned_cols=31  Identities=19%  Similarity=0.097  Sum_probs=24.8

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.|+ |.-|...|.++++.|.+|.++.+..
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~~   36 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKYK   36 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence            466675 4458899999999999999998643

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=84.27  E-value=0.59  Score=31.13  Aligned_cols=32  Identities=28%  Similarity=0.353  Sum_probs=25.4

Q ss_pred             cEEEEecCCcc---hHHHHHHHHHHcCCeEEEeec
Q psy7029           3 KIIVVTGASVG---IGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         3 ~~~lItG~~~g---iG~~~a~~l~~~g~~v~~~~r   34 (125)
                      |+.+++++++|   --.+++++|.++|++|..+..
T Consensus         2 rIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~   36 (401)
T d1rrva_           2 RVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP   36 (401)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             eEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            78888888765   234688999999999998864

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=84.17  E-value=1.4  Score=27.54  Aligned_cols=38  Identities=18%  Similarity=0.280  Sum_probs=27.1

Q ss_pred             CcEEEEecCCcc-hHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVG-IGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      +.++|=.||+.| +...+++.+...+++|+.++.++...
T Consensus        40 ~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml   78 (225)
T d1im8a_          40 DSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMV   78 (225)
T ss_dssp             TCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHH
T ss_pred             CCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHH
Confidence            457788899777 34445554445688999999998755

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.78  E-value=0.75  Score=28.12  Aligned_cols=30  Identities=17%  Similarity=0.196  Sum_probs=24.6

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc-CCeEEEe
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK-GHQVIGF   32 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~-g~~v~~~   32 (125)
                      ..+-|.|++|-.|..+.+.|.++ .+++..+
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            56778999999999999999987 5566544

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=83.72  E-value=2.9  Score=26.88  Aligned_cols=35  Identities=20%  Similarity=0.085  Sum_probs=25.6

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~   39 (125)
                      +.++|=.||+.|   .++..|+++ |++|++++.++...
T Consensus        68 ~~~vLDiGcG~G---~~~~~la~~~~~~v~gvD~s~~~i  103 (282)
T d2o57a1          68 QAKGLDLGAGYG---GAARFLVRKFGVSIDCLNIAPVQN  103 (282)
T ss_dssp             TCEEEEETCTTS---HHHHHHHHHHCCEEEEEESCHHHH
T ss_pred             CCEEEEeCCCCc---HHHhhhhccCCcEEEEEeccchhh
Confidence            457777888777   345566665 88999999887654

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=83.47  E-value=0.81  Score=29.57  Aligned_cols=35  Identities=23%  Similarity=0.374  Sum_probs=26.1

Q ss_pred             CcEEEEecCCcchHHH-----HHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAA-----ILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~-----~a~~l~~~g~~v~~~~r~~~   37 (125)
                      -+.++++| -||.|+.     +|..|+++|.+|.+++-+++
T Consensus         8 p~~i~~sG-KGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~   47 (296)
T d1ihua1           8 PPYLFFTG-KGGVGKTSISCATAIRLAEQGKRVLLVSTDPA   47 (296)
T ss_dssp             CSEEEEEC-STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CeEEEEEC-CCcChHHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            35555555 6666665     78999999999999987743

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.12  E-value=3.2  Score=29.81  Aligned_cols=73  Identities=23%  Similarity=0.217  Sum_probs=45.6

Q ss_pred             cEEEEecCC-cchHHHHHHHHHHc-CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhhcCCCc
Q psy7029           3 KIIVVTGAS-VGIGAAILRALAAK-GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAKENPDW   80 (125)
Q Consensus         3 ~~~lItG~~-~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (125)
                      +.+.|.||| |.-|.+.++.+... +.+|+++.....-.                           +-+-..+.. ..+.
T Consensus       151 ~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS---------------------------~iQ~~Qmtt-~~~~  202 (511)
T d1kl7a_         151 KQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRIS---------------------------PIQEEQMTT-VPDE  202 (511)
T ss_dssp             CCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSC---------------------------HHHHHHHHH-CCCT
T ss_pred             ceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCc---------------------------hHHHHHHhh-cCCc
Confidence            455666665 55999999999854 67888887754311                           011122222 2223


Q ss_pred             eeeEEEecCCChHHHHHHHHHHHh
Q psy7029          81 KVHSLKVDVTKDAEVVEAFDWINN  104 (125)
Q Consensus        81 ~~~~~~~Dv~~~~~v~~~~~~~~~  104 (125)
                      .++.+.+| .+.++..++++++..
T Consensus       203 Nv~~i~v~-G~fDDcq~~vk~~f~  225 (511)
T d1kl7a_         203 NVQTLSVT-GTFDNCQDIVKAIFG  225 (511)
T ss_dssp             TEEEEEES-SCHHHHHHHHHHHHH
T ss_pred             eEEEEEec-cChHHHHHHHHHHHh
Confidence            67777776 578888888888764

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=83.07  E-value=0.62  Score=28.32  Aligned_cols=34  Identities=12%  Similarity=0.060  Sum_probs=27.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++-++|.|++ -.|...|..+++.|.+|+++.+..
T Consensus         5 ~~dVvIIGGG-paGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGSG-PAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEECCS-HHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCcEEEECCC-HHHHHHHHHHHHcCCceEEEEeec
Confidence            3567888854 478899999999999999998654

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=82.91  E-value=0.73  Score=29.84  Aligned_cols=32  Identities=22%  Similarity=0.252  Sum_probs=26.1

Q ss_pred             EEEecCCcchHHHHHHHHHHc-CCeEEEeecCch
Q psy7029           5 IVVTGASVGIGAAILRALAAK-GHQVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~   37 (125)
                      ++|.|+ |--|...|.+|+++ |.+|.++.+.+.
T Consensus        36 ViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1          36 VVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             EEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             EEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            677885 55688899999875 999999998754

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=82.79  E-value=0.8  Score=27.39  Aligned_cols=30  Identities=30%  Similarity=0.257  Sum_probs=24.5

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      ++|.| +|-.|...|..+++.|.+++++.+.
T Consensus         4 ViIIG-gGpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           4 VLIVG-SGPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEC-CSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCeEEEEEEe
Confidence            46666 5567888999999999999999864

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=82.67  E-value=0.77  Score=30.34  Aligned_cols=32  Identities=22%  Similarity=0.174  Sum_probs=24.3

Q ss_pred             cEEEEecCCcc---hHHHHHHHHHHcCCeEEEeec
Q psy7029           3 KIIVVTGASVG---IGAAILRALAAKGHQVIGFAR   34 (125)
Q Consensus         3 ~~~lItG~~~g---iG~~~a~~l~~~g~~v~~~~r   34 (125)
                      |+.+.+++++|   =-.+++++|+++|++|+.++.
T Consensus         2 kil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~   36 (401)
T d1iira_           2 RVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP   36 (401)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence            76666666654   345689999999999988874

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=82.65  E-value=1.2  Score=24.92  Aligned_cols=36  Identities=22%  Similarity=0.121  Sum_probs=27.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH---cCCeEEEeecCchh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA---KGHQVIGFARRAEM   38 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~---~g~~v~~~~r~~~~   38 (125)
                      .+.++|.| +|.+|..+|..|.+   .|.+|.++.|.+..
T Consensus        18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~i   56 (117)
T d1feca2          18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDMI   56 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred             CCeEEEEC-CChHHHHHHHHhHhhcccccccceecccccc
Confidence            36778888 67889998876654   48899999987653

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=82.50  E-value=0.61  Score=25.99  Aligned_cols=35  Identities=14%  Similarity=0.200  Sum_probs=27.1

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ||.++|.|++ --|..++..|++.+.+++...|+..
T Consensus        32 gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          32 GESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             TCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            7889999965 4477889999988888777776544

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=82.36  E-value=0.95  Score=25.51  Aligned_cols=37  Identities=19%  Similarity=0.161  Sum_probs=27.3

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH---cCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA---KGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~---~g~~v~~~~r~~~~~   39 (125)
                      .+.++|.| +|.+|..+|..|.+   .+.+|.++.+.+..+
T Consensus        20 p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL   59 (117)
T d1aoga2          20 PRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGEMIL   59 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSSSSS
T ss_pred             CCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccchhh
Confidence            36778888 48899999966654   456799998876543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=82.12  E-value=3.3  Score=24.27  Aligned_cols=28  Identities=18%  Similarity=0.114  Sum_probs=21.5

Q ss_pred             CcchHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029          11 SVGIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus        11 ~~giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      .|-+|..+++.|++.|+.+ ..+|+.++.
T Consensus         8 lG~MG~~ma~~L~~~g~~~-~~~~~~~~~   35 (156)
T d2cvza2           8 LGAMGYPMAGHLARRFPTL-VWNRTFEKA   35 (156)
T ss_dssp             CSTTHHHHHHHHHTTSCEE-EECSSTHHH
T ss_pred             HHHHHHHHHHHHHhCCCEE-EEeCCHHHH
Confidence            5789999999999988765 566765543

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=82.05  E-value=4  Score=25.26  Aligned_cols=83  Identities=18%  Similarity=0.119  Sum_probs=42.7

Q ss_pred             EEEecCCcchHHHH----HHHHHHc-----CCeEEEeecCchhhhHHHHHHHHHHHHHhhcCCccccccchHhHHHHHhh
Q psy7029           5 IVVTGASVGIGAAI----LRALAAK-----GHQVIGFARRAEMIDFAESLFAFFVDIVAAKGHQVIGFARRAEMIDAMAK   75 (125)
Q Consensus         5 ~lItG~~~giG~~~----a~~l~~~-----g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (125)
                      .+|.||+|-+.+.-    .-.|...     ...++.++|+.-..+.   ..............       .+...+....
T Consensus         8 lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~---f~~~v~~~l~~~~~-------~~~~~~~~~~   77 (195)
T d1h9aa1           8 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDE---FKQLVRDSIKDFTD-------DQAQAEAFIE   77 (195)
T ss_dssp             EEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHH---HHHHHHHHHGGGCS-------CHHHHHHHHT
T ss_pred             EEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHH---HHHHHHHHHhhccc-------hHhhHHHHhh
Confidence            45789999887751    1222233     3579999997654322   11111111111111       1222333322


Q ss_pred             cCCCceeeEEEecCCChHHHHHHHHHH
Q psy7029          76 ENPDWKVHSLKVDVTKDAEVVEAFDWI  102 (125)
Q Consensus        76 ~~~~~~~~~~~~Dv~~~~~v~~~~~~~  102 (125)
                           ++.+.+.|+.++++..++.+.+
T Consensus        78 -----~~~y~~~~~~~~~~~~~l~~~l   99 (195)
T d1h9aa1          78 -----HFSYRAHDVTDAASYAVLKEAI   99 (195)
T ss_dssp             -----TEEEEECCTTCTTTHHHHHHHH
T ss_pred             -----ccceeeEeeccHhhHHHHHHHH
Confidence                 5778888888776655554444

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.75  E-value=0.91  Score=27.69  Aligned_cols=34  Identities=9%  Similarity=0.034  Sum_probs=26.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      .+.++|.|++ -.|...|..+++.|.+++++.+..
T Consensus         5 ~~~VvIIGgG-paGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           5 NTRLCIVGSG-PAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEEECCS-HHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             cceEEEECCC-HHHHHHHHHHHHcCCcEEEEEeec
Confidence            3567778854 478889999999999999997643

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.55  E-value=2.5  Score=27.80  Aligned_cols=35  Identities=14%  Similarity=0.207  Sum_probs=26.2

Q ss_pred             CcEEEEecCCcchHHHHHHHHHH-cCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAA-KGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~   39 (125)
                      |..+|=.||+.|   .++.++++ .|++|+.+..++...
T Consensus        63 G~~VLDiGCG~G---~~a~~~a~~~g~~v~git~s~~Q~   98 (285)
T d1kpga_          63 GMTLLDVGCGWG---ATMMRAVEKYDVNVVGLTLSKNQA   98 (285)
T ss_dssp             TCEEEEETCTTS---HHHHHHHHHHCCEEEEEESCHHHH
T ss_pred             CCEEEEecCcch---HHHHHHHhcCCcceEEEeccHHHH
Confidence            667888998877   44555553 489999999998765

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=81.33  E-value=1.1  Score=27.99  Aligned_cols=32  Identities=28%  Similarity=0.188  Sum_probs=26.0

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCch
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~   37 (125)
                      ++|.|+ +.-|++.|.++++.|.+|.++.+...
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~~   40 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYKT   40 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            466774 55699999999999999999987653

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=81.14  E-value=3.2  Score=26.21  Aligned_cols=36  Identities=17%  Similarity=0.186  Sum_probs=26.7

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCC-eEEEeecCchhhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGH-QVIGFARRAEMID   40 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~   40 (125)
                      ++++|=.||+.|   .....|++.|+ +|++++.++....
T Consensus        25 ~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~   61 (252)
T d1ri5a_          25 GDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSIN   61 (252)
T ss_dssp             TCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHH
T ss_pred             cCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHH
Confidence            567888898876   23556777775 7999999987653

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=81.03  E-value=3.4  Score=24.79  Aligned_cols=28  Identities=25%  Similarity=0.363  Sum_probs=22.8

Q ss_pred             EEEEecCCcchHHHHHHHHHHc-CCeEEE
Q psy7029           4 IIVVTGASVGIGAAILRALAAK-GHQVIG   31 (125)
Q Consensus         4 ~~lItG~~~giG~~~a~~l~~~-g~~v~~   31 (125)
                      .+.|.|++|-+|+.+++...+. ++.++.
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~   34 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGA   34 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEE
Confidence            5788999999999999988876 555543

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.70  E-value=2.2  Score=27.69  Aligned_cols=36  Identities=14%  Similarity=0.206  Sum_probs=28.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      ++.+|=.||+.|   .++..|+++|++|+.++.++..+.
T Consensus        57 ~~~vLD~GcG~G---~~~~~la~~g~~v~gvD~S~~ml~   92 (292)
T d1xvaa_          57 CHRVLDVACGTG---VDSIMLVEEGFSVTSVDASDKMLK   92 (292)
T ss_dssp             CCEEEESSCTTS---HHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCEEEEecCCCc---HHHHHHHHcCCeeeeccCchHHHH
Confidence            457888999887   356778889999999999987553

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=80.69  E-value=0.84  Score=29.98  Aligned_cols=32  Identities=19%  Similarity=0.282  Sum_probs=24.9

Q ss_pred             EEEecCCcchHHHHHHHHH-----HcCCeEEEeecCch
Q psy7029           5 IVVTGASVGIGAAILRALA-----AKGHQVIGFARRAE   37 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~-----~~g~~v~~~~r~~~   37 (125)
                      ++|.| +|-.|..+|..|+     +.|++|+++.|.+.
T Consensus        10 V~IvG-aG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1          10 VLIVG-AGPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            56777 5567888888886     46999999998754

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=80.64  E-value=1  Score=27.87  Aligned_cols=30  Identities=10%  Similarity=0.055  Sum_probs=25.7

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      ++|.| +|-.|...|..+++.|.+|.++.+.
T Consensus         8 lvVIG-~GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           8 LLIIG-GGPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCcEEEEecC
Confidence            56777 5568999999999999999999875

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.61  E-value=1.2  Score=27.38  Aligned_cols=31  Identities=23%  Similarity=0.163  Sum_probs=25.6

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecCc
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARRA   36 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~   36 (125)
                      ++|.|+ |-.|...|.++++.|.+|.++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            466674 5689999999999999999998753

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=80.55  E-value=0.84  Score=30.86  Aligned_cols=30  Identities=23%  Similarity=0.355  Sum_probs=24.1

Q ss_pred             EEEecCCcchHHHHHHHHHHcCCeEEEeecC
Q psy7029           5 IVVTGASVGIGAAILRALAAKGHQVIGFARR   35 (125)
Q Consensus         5 ~lItG~~~giG~~~a~~l~~~g~~v~~~~r~   35 (125)
                      ++|.|++ .-|..+|.+|++.|.+|+++-+-
T Consensus         5 ~IIVGsG-~aG~v~A~rLae~g~~VlvLEaG   34 (360)
T d1kdga1           5 YIIVGAG-PGGIIAADRLSEAGKKVLLLERG   34 (360)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECcC-HHHHHHHHHHhhCCCeEEEEEcc
Confidence            5777754 44788999999999999998764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=80.47  E-value=6  Score=26.21  Aligned_cols=34  Identities=18%  Similarity=0.131  Sum_probs=21.8

Q ss_pred             CcEEEEecCCc-chHHHHHHHHHHcCCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASV-GIGAAILRALAAKGHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~-giG~~~a~~l~~~g~~v~~~~r~~~~~   39 (125)
                      |+.+|=.++.. +++.+    +++.+.+|+.++.++...
T Consensus       146 g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al  180 (318)
T d1wxxa2         146 GERALDVFSYAGGFALH----LALGFREVVAVDSSAEAL  180 (318)
T ss_dssp             EEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHH
T ss_pred             CCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHH
Confidence            45566556544 44333    455677999999998765

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=80.47  E-value=4.8  Score=25.14  Aligned_cols=35  Identities=20%  Similarity=0.241  Sum_probs=25.5

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHc-CCeEEEeecCchhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAK-GHQVIGFARRAEMI   39 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~   39 (125)
                      |+.+|=.||+.|   .++..|+++ |++|+.++.++...
T Consensus        34 g~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~   69 (245)
T d1nkva_          34 GTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFT   69 (245)
T ss_dssp             TCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHH
T ss_pred             CCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchh
Confidence            566777888777   345566654 78999999987655

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.12  E-value=1.6  Score=27.35  Aligned_cols=38  Identities=16%  Similarity=0.285  Sum_probs=25.8

Q ss_pred             CcEEEEecCCcchHHHHHHHHHHcCCeEEEeecCchhhh
Q psy7029           2 SKIIVVTGASVGIGAAILRALAAKGHQVIGFARRAEMID   40 (125)
Q Consensus         2 ~~~~lItG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   40 (125)
                      |.++|=.||+.|.-......+...| +|++++.++....
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~   94 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFE   94 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHH
T ss_pred             CCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHH
Confidence            5678889998885444333344445 8999999987553

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=80.04  E-value=1.1  Score=26.97  Aligned_cols=32  Identities=28%  Similarity=0.419  Sum_probs=25.7

Q ss_pred             cEEEEecCCcchHHHHHHHHHHc--CCeEEEeec
Q psy7029           3 KIIVVTGASVGIGAAILRALAAK--GHQVIGFAR   34 (125)
Q Consensus         3 ~~~lItG~~~giG~~~a~~l~~~--g~~v~~~~r   34 (125)
                      |.+.|.|+||.||.+...-+.+.  .++|+++.-
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa   36 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA   36 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe
Confidence            88999999999999988877664  577776543