Diaphorina citri psyllid: psy7030

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
MIVKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN
cEEEEEEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccHHHHHHHHcccHHHHHHHHHccccccccHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccccccccccccccccccccccccccccEEEcccc
**VKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN
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MIVKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Transient-receptor-potential-like protein A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction. Required for vision in the dark and in dim light. Binds calmodulin. Trp and trpl act together in the light response, although it is unclear whether as heteromultimers or distinct units. Also forms a functional cation channel with trp-gamma. Activated by fatty acids, metabolic stress, inositols and GTP-binding proteins.confidentP48994

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0035997 [CC]rhabdomere microvillus membraneprobableGO:0031528, GO:0035996, GO:0016028, GO:0033583, GO:0044464, GO:0044463, GO:0031253, GO:0005623, GO:0005575, GO:0005902, GO:0071944, GO:0005886, GO:0044425, GO:0016020, GO:0042995, GO:0044459
GO:0050896 [BP]response to stimulusprobableGO:0008150
GO:0005262 [MF]calcium channel activityprobableGO:0022891, GO:0015085, GO:0022892, GO:0005261, GO:0022890, GO:0005215, GO:0005216, GO:0008324, GO:0072509, GO:0015075, GO:0022857, GO:0015267, GO:0003674, GO:0022803, GO:0046873, GO:0022838
GO:0016021 [CC]integral to membraneprobableGO:0005575, GO:0044425, GO:0016020, GO:0031224
GO:0043234 [CC]protein complexprobableGO:0005575, GO:0032991
GO:0050794 [BP]regulation of cellular processprobableGO:0008150, GO:0065007, GO:0050789
GO:0043229 [CC]intracellular organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0043226
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0070588 [BP]calcium ion transmembrane transportprobableGO:0009987, GO:0070838, GO:0006812, GO:0006811, GO:0006810, GO:0044763, GO:0006816, GO:0051179, GO:0008150, GO:0034220, GO:0044765, GO:0030001, GO:0072511, GO:0051234, GO:0055085, GO:0044699
GO:0070679 [MF]inositol 1,4,5 trisphosphate bindingprobableGO:0043168, GO:0043178, GO:0043167, GO:0036094, GO:0003674, GO:0005488

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N11, chain A
Confidence level:very confident
Coverage over the Query: 43-161
View the alignment between query and template
View the model in PyMOL
Template: 4DXW, chain A
Confidence level:probable
Coverage over the Query: 188-236,280-336
View the alignment between query and template
View the model in PyMOL