Psyllid ID: psy7030

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
Protein Sequence
MIVKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN
Secondary Structure (PSIPRED)
cEEEEEEEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccHHHHHHHHcccHHHHHHHHHccccccccHHHHHccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccccccccccccccccccccccccccccEEEcccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEEEEcccccccccEcccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHcccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHccccccccccccccccccHHEEEEEcc
Coil and Loop (DISEMBL)
MIVKAQFNFWFQVGveiegpgivhtqpfdmpnlptpltleEKKYLLSVERGDTATVRKCIKRAYrnhhidincvdplgrSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVhkegepylsrkppkscqnTAYRILLLLVSQRADVILLEYlgvtdnhitgqqrglapSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANesskflgrehwnafdpQLIAEGLFAGANVFSALKLVHLFSinphlgplqisLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTElerkdcystmsstgalnpsedpnweehDAACSKWRSFN
Flexible Loop (DISEMBL)
MIVKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLlsvergdtatVRKCIKRayrnhhidincvdplGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKegepylsrkppksCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGalnpsedpnweEHDAACSKWRSFN
Low Complexity Region (SEG)
MIVKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSefveavellleyeeivHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN
Disordered region (IsUnstruct)
**VKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKEGEPYL******SCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYS******************************
Disordered Region (DISOPRED)
*****************************************KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN
Disordered Region (DISEMBL)
MIVKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN
Disordered Region (DISPRO)
MIVKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIV*KEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTG*LNPSEDPNWEEHDAACSKWRSFN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MIVKAQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	377	2.2.26 [Sep-21-2011]
P48994	1124	Transient-receptor-potent	yes	N/A	0.570	0.191	0.583	7e-72
Q9VJJ7	1128	Transient receptor potent	no	N/A	0.599	0.200	0.456	1e-57
P19334	1275	Transient receptor potent	no	N/A	0.503	0.149	0.479	6e-45
P79100	979	Short transient receptor	yes	N/A	0.413	0.159	0.466	3e-38
O35119	977	Short transient receptor	yes	N/A	0.413	0.159	0.466	3e-38
Q9UBN4	977	Short transient receptor	yes	N/A	0.413	0.159	0.466	3e-38
Q9QUQ5	974	Short transient receptor	yes	N/A	0.413	0.160	0.466	3e-38
Q9UL62	973	Short transient receptor	no	N/A	0.461	0.178	0.416	3e-37
O62852	974	Short transient receptor	no	N/A	0.461	0.178	0.416	3e-37
Q9QX29	975	Short transient receptor	no	N/A	0.461	0.178	0.416	3e-37

>sp|P48994|TRPL_DROME Transient-receptor-potential-like protein OS=Drosophila melanogaster GN=trpl PE=1 SV=2

 Score =  271 bits (692), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 133/228 (58%), Positives = 159/228 (69%), Gaps = 13/228 (5%)

Query: 154 LLLLVSQRADVILLEYLGVT--DNHITGQ---QRGLAPSYLEYLVLLYVAGYIWEETCEV 208
           +L+LVSQRAD   +   G T     +  Q   QRG  PS LE +V++YV G++WEE  E+
Sbjct: 390 ILILVSQRADDDFVRIFGTTRMKKELAEQELRQRGQTPSKLELIVVMYVIGFVWEEVQEI 449

Query: 209 WKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFD 268
           +  G+  YL++MWNFIDF RN LYV V  LRA AY+QQ  EI  +    ++ RE W+ FD
Sbjct: 450 FAVGMKSYLRNMWNFIDFLRNSLYVSVMCLRAFAYIQQATEIARDPQMAYIPREKWHDFD 509

Query: 269 PQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFAC 328
           PQLIAEGLFA ANVFSALKLVHLFSINPHLGPLQISLGRM+IDIVKFFFIYTLVL +FAC
Sbjct: 510 PQLIAEGLFAAANVFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFAC 569

Query: 329 GLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSF 376
           GLNQLLWYF  LE+  CY        + P  + +W  H  +C KWR F
Sbjct: 570 GLNQLLWYFAALEKSKCY--------VLPGGEADWGSHGDSCMKWRRF 609

A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction. Required for vision in the dark and in dim light. Binds calmodulin. Trp and trpl act together in the light response, although it is unclear whether as heteromultimers or distinct units. Also forms a functional cation channel with trp-gamma. Activated by fatty acids, metabolic stress, inositols and GTP-binding proteins.
Drosophila melanogaster (taxid: 7227)

>sp|Q9VJJ7|TRPG_DROME Transient receptor potential-gamma protein OS=Drosophila melanogaster GN=trpgamma PE=1 SV=2

 Score =  224 bits (570), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 111/243 (45%), Positives = 156/243 (64%), Gaps = 17/243 (6%)

Query: 146 CQNTAY---RILLLLVSQRADVILLEYLGVTDNHITGQ------QRGLAPSYLEYLVLLY 196
           C + +Y     LL+L SQR +  +  +     + +         +RG  P+++E+L+L +
Sbjct: 358 CHSASYFTFLFLLMLASQRIETFIGGWFFADSSGMLNTMEELPTKRGAKPTFIEWLILAW 417

Query: 197 VAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESS 256
           V+G IW E  ++W  GL  YL DMWN IDF  N LYV    LR +++ Q Q E+  N  +
Sbjct: 418 VSGLIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLYVATVALRVVSFFQVQKEMIYNSHA 477

Query: 257 KFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFF 316
             L RE W+A+DP LI+EGLF+ AN+FS+LKLV++FS+NPHLGPLQ+SL RM++DI+KFF
Sbjct: 478 TDLPRERWDAWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFF 537

Query: 317 FIYTLVLLSFACGLNQLLWYFTELERKDC--YSTMSSTGALNPSEDPNWEEHDAACSKWR 374
           F+Y LVL +F  GLNQLLWY+ +LE+K C   S MS+   +N + DPN      AC  WR
Sbjct: 538 FLYVLVLFAFGSGLNQLLWYYADLEKKRCPEVSPMSALLNMNGTNDPN------ACIVWR 591

Query: 375 SFN 377
            F+
Sbjct: 592 RFS 594

A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction (By similarity). Forms a regulated cation channel when heteromultimerized with trpl.

Drosophila melanogaster (taxid: 7227)

>sp|P19334|TRP_DROME Transient receptor potential protein OS=Drosophila melanogaster GN=trp PE=1 SV=3

 Score =  181 bits (460), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 95/198 (47%), Positives = 132/198 (66%), Gaps = 8/198 (4%)

Query: 180 QQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLR 239
            +RG  P  +E  ++ Y+   I+EE   ++ DGL+ Y+ D+WN +D+  N+ YV   + R
Sbjct: 414 HERGSLPGPIELAIITYIMALIFEELKSLYSDGLFEYIMDLWNIVDYISNMFYVTWILCR 473

Query: 240 AMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLG 299
           A A+V    ++       +  REHW+ FDP L++EG FA   VFS LKLVH+FSINPHLG
Sbjct: 474 ATAWVIVHRDLWFRGIDPYFPREHWHPFDPMLLSEGAFAAGMVFSYLKLVHIFSINPHLG 533

Query: 300 PLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSE 359
           PLQ+SLGRMIIDI+KFFFIYTLVL +F CGLNQLLWY+ ELE+  CY        L+P +
Sbjct: 534 PLQVSLGRMIIDIIKFFFIYTLVLFAFGCGLNQLLWYYAELEKNKCYH-------LHP-D 585

Query: 360 DPNWEEHDAACSKWRSFN 377
             ++++ + AC+ WR F+
Sbjct: 586 VADFDDQEKACTIWRRFS 603

A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction. Ca(2+) influx may then feed back and inhibit PLC, thereby facilitating phosphatidylinositol 4,5 bisphosphate (PIP2) recycling. Trp and trpl act together in the light response, though it is unclear whether as heteromultimers or as distinct units, and are activated by fatty acids and metabolic stress. Also required for olfactory adaptation and may be involved in olfactory system development.

Drosophila melanogaster (taxid: 7227)

>sp|P79100|TRPC4_BOVIN Short transient receptor potential channel 4 OS=Bos taurus GN=TRPC4 PE=2 SV=2

 Score =  159 bits (403), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 110/165 (66%), Gaps = 9/165 (5%)

Query: 181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
           ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct: 394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query: 241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
           +A+V+  A            RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct: 454 VAFVKYSA---------LNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query: 301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
           LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct: 505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC 549

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion. Acts as a cell-cell contact-dependent endothelial calcium entry channel.

Bos taurus (taxid: 9913)

>sp|O35119|TRPC4_RAT Short transient receptor potential channel 4 OS=Rattus norvegicus GN=Trpc4 PE=1 SV=2

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 110/165 (66%), Gaps = 9/165 (5%)

Query: 181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
           ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct: 394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query: 241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
           +A+V+  A            RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct: 454 VAFVKYSA---------LNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query: 301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
           LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct: 505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC 549

Thought to form non-selective a receptor-activated calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Acts as a cell-cell contact-dependent endothelial calcium entry channel. Has also been shown to be calcium-selective (By similarity). May also be activated by intracellular calcium store depletion.

Rattus norvegicus (taxid: 10116)

>sp|Q9UBN4|TRPC4_HUMAN Short transient receptor potential channel 4 OS=Homo sapiens GN=TRPC4 PE=1 SV=1

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 110/165 (66%), Gaps = 9/165 (5%)

Query: 181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
           ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct: 394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query: 241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
           +A+V+  A            RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct: 454 VAFVKYSA---------LNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query: 301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
           LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct: 505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLTC 549

Form a receptor-activated non-selective calcium permeant cation channel. Acts as a cell-cell contact-dependent endothelial calcium entry channel. Probably operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Mediates cation entry, with an enhanced permeability to barium over calcium. May also be activated by intracellular calcium store depletion.

Homo sapiens (taxid: 9606)

>sp|Q9QUQ5|TRPC4_MOUSE Short transient receptor potential channel 4 OS=Mus musculus GN=Trpc4 PE=1 SV=1

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/165 (46%), Positives = 110/165 (66%), Gaps = 9/165 (5%)

Query: 181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
           ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct: 394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query: 241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
           +A+V+  A            RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct: 454 VAFVKYSA---------LNPRESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query: 301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
           LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct: 505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC 549

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Acts as a cell-cell contact-dependent endothelial calcium entry channel. Has also been shown to be calcium-selective (By similarity). May also be activated by intracellular calcium store depletion. Trpc4 deficient mice lack a store-operated calcium entry in endothelial cells.

Mus musculus (taxid: 10090)

>sp|Q9UL62|TRPC5_HUMAN Short transient receptor potential channel 5 OS=Homo sapiens GN=TRPC5 PE=1 SV=1

 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 117/192 (60%), Gaps = 18/192 (9%)

Query: 146 CQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEET 205
           C   +Y   L ++     ++  +++  TD H+    +G  P+ +E+++L +V G+IW E 
Sbjct: 369 CHTASYLTFLFML-----LLASQHIVRTDLHV----QGPPPTVVEWMILPWVLGFIWGEI 419

Query: 206 CEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWN 265
            E+W  G   Y+ D WN +DF  N LY+    L+ +AYV+               RE W 
Sbjct: 420 KEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGS---------RPREEWE 470

Query: 266 AFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLS 325
            + P LIAE LFA +N+ S+L+L+ LF+ N HLGPLQISLGRM++DI+KF FIY LVLL+
Sbjct: 471 MWHPTLIAEALFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLA 530

Query: 326 FACGLNQLLWYF 337
           FA GLNQL +Y+
Sbjct: 531 FANGLNQLYFYY 542

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective (By similarity). May also be activated by intracellular calcium store depletion.

Homo sapiens (taxid: 9606)

>sp|O62852|TRPC5_RABIT Short transient receptor potential channel 5 OS=Oryctolagus cuniculus GN=TRPC5 PE=2 SV=1

 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 117/192 (60%), Gaps = 18/192 (9%)

Query: 146 CQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEET 205
           C   +Y   L ++     ++  +++  TD H+    +G  P+ +E+++L +V G+IW E 
Sbjct: 369 CHTASYLTFLFML-----LLASQHIVRTDLHV----QGPPPTVVEWMILPWVLGFIWGEI 419

Query: 206 CEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWN 265
            E+W  G   Y+ D WN +DF  N LY+    L+ +AYV+               RE W 
Sbjct: 420 KEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGS---------RPREEWE 470

Query: 266 AFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLS 325
            + P LIAE LFA +N+ S+L+L+ LF+ N HLGPLQISLGRM++DI+KF FIY LVLL+
Sbjct: 471 MWHPTLIAEALFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLA 530

Query: 326 FACGLNQLLWYF 337
           FA GLNQL +Y+
Sbjct: 531 FANGLNQLYFYY 542

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q9QX29|TRPC5_MOUSE Short transient receptor potential channel 5 OS=Mus musculus GN=Trpc5 PE=1 SV=2

 Score =  155 bits (393), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 117/192 (60%), Gaps = 18/192 (9%)

Query: 146 CQNTAYRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEET 205
           C   +Y   L ++     ++  +++  TD H+    +G  P+ +E+++L +V G+IW E 
Sbjct: 369 CHTASYLTFLFML-----LLASQHIVRTDLHV----QGPPPTVVEWMILPWVLGFIWGEI 419

Query: 206 CEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWN 265
            E+W  G   Y+ D WN +DF  N LY+    L+ +AYV+               RE W 
Sbjct: 420 KEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGS---------RPREEWE 470

Query: 266 AFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLS 325
            + P LIAE LFA +N+ S+L+L+ LF+ N HLGPLQISLGRM++DI+KF FIY LVLL+
Sbjct: 471 MWHPTLIAEALFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLA 530

Query: 326 FACGLNQLLWYF 337
           FA GLNQL +Y+
Sbjct: 531 FANGLNQLYFYY 542

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
307199979	1243	Transient-receptor-potential-like protei	0.570	0.172	0.620	8e-78
322793221	1134	hypothetical protein SINV_04889 [Solenop	0.570	0.189	0.624	6e-77
332016436	1193	Transient-receptor-potential-like protei	0.570	0.180	0.611	9e-76
357607161	1019	calmodulin-binding protein trpl [Danaus	0.557	0.206	0.604	4e-75
350413466	1091	PREDICTED: transient-receptor-potential-	0.570	0.197	0.589	5e-75
158284739	1081	AGAP010630-PA [Anopheles gambiae str. PE	0.559	0.195	0.598	1e-74
405977232	827	Transient receptor potential-gamma prote	0.814	0.371	0.424	3e-74
307180174	782	Transient-receptor-potential-like protei	0.570	0.274	0.606	4e-74
380014963	1085	PREDICTED: transient-receptor-potential-	0.567	0.197	0.595	9e-74
328782400	933	PREDICTED: LOW QUALITY PROTEIN: transien	0.567	0.229	0.591	1e-73

>gi|307199979|gb|EFN80329.1| Transient-receptor-potential-like protein [Harpegnathos saltator]

 Score =  296 bits (759), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 142/229 (62%), Positives = 173/229 (75%), Gaps = 14/229 (6%)

Query: 154 LLLLVSQRADVILLEYLGVTDNHIT-----GQQRGLAPSYLEYLVLLYVAGYIWEETCEV 208
           +L+LVSQRA+V ++  LG  +          +QRG AP+ LE +V+LYV G+IWEE  EV
Sbjct: 444 VLMLVSQRAEVEIVRLLGTQEMKRNLEAYLARQRGAAPTPLEGIVVLYVTGFIWEEIREV 503

Query: 209 WKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFD 268
           + DGL  YL+DMWNFIDFTRN+LY+   +LR  AY+QQ++EI +N S+  + RE+W  FD
Sbjct: 504 YVDGLKAYLRDMWNFIDFTRNMLYLATGLLRLAAYLQQRSEIRSNPSAALIPRENWGDFD 563

Query: 269 PQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFAC 328
           PQLIAEGLFA ANVFSALKLVHLFSINPHLGPLQISLGRM+IDIVKFFFIY+LVL +FAC
Sbjct: 564 PQLIAEGLFAAANVFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYSLVLFAFAC 623

Query: 329 GLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN 377
           GLNQLLWYF ELER+ CYS MS         DP+W+    AC +WR F+
Sbjct: 624 GLNQLLWYFAELERRKCYSGMS---------DPSWDAGSDACLRWRRFS 663

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322793221|gb|EFZ16878.1| hypothetical protein SINV_04889 [Solenopsis invicta]

 Score =  293 bits (751), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 143/229 (62%), Positives = 172/229 (75%), Gaps = 14/229 (6%)

Query: 154 LLLLVSQRADVILLEYLGVTD-----NHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEV 208
           +L+LVSQRA+V ++  LG  +          +QRG  PS LE +V+LYV G++WEET E 
Sbjct: 375 VLMLVSQRAEVKIIRLLGSQEMKRNLETYLDRQRGAVPSPLEGIVVLYVFGFLWEETREA 434

Query: 209 WKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFD 268
           + DGL  YL+DMWNFIDFTRN LY+   +LR  AY+QQ+AEIE N S+  + RE+W+ FD
Sbjct: 435 YVDGLRSYLRDMWNFIDFTRNTLYLATGILRLAAYLQQRAEIEMNPSAALIPRENWSDFD 494

Query: 269 PQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFAC 328
           PQLIAEGLFA ANVFSALKLVHLFSINPHLGPLQISLGRM+IDIVKFFFIYTLVL +FAC
Sbjct: 495 PQLIAEGLFAAANVFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFAC 554

Query: 329 GLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN 377
           GLNQLLWYF ELER+ CY+ MS         DP+W+    AC +WR F+
Sbjct: 555 GLNQLLWYFAELERQKCYNGMS---------DPSWDAGSDACLRWRRFS 594

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332016436|gb|EGI57349.1| Transient-receptor-potential-like protein [Acromyrmex echinatior]

 Score =  290 bits (742), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 140/229 (61%), Positives = 172/229 (75%), Gaps = 14/229 (6%)

Query: 154 LLLLVSQRADVILLEYLGVTDNHIT-----GQQRGLAPSYLEYLVLLYVAGYIWEETCEV 208
           +L+LVSQRA+V ++  LG  +          +QRG AP+ LE +V+LYV G+IWEET EV
Sbjct: 387 VLMLVSQRAEVEIVRLLGSQEMKRNLEAYLARQRGAAPTPLEGIVVLYVFGFIWEETREV 446

Query: 209 WKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFD 268
           + +GL  YL+DMWNFIDFTRN LY+   +LR  AY+QQ+AEI  + S+  + RE+W+ FD
Sbjct: 447 YINGLKSYLRDMWNFIDFTRNTLYMATGILRLAAYLQQRAEIRMDPSAALISRENWSDFD 506

Query: 269 PQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFAC 328
           PQLIAEGLFA ANVFSALK+VHLFSINPHLGPLQISLGRM+IDIVKFFFIYTLVL +FAC
Sbjct: 507 PQLIAEGLFAAANVFSALKIVHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFAC 566

Query: 329 GLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN 377
           GLNQLLWYF ELER+ CY  +S         DP+W+    AC +WR F+
Sbjct: 567 GLNQLLWYFAELERQKCYRGIS---------DPSWDAGSDACLRWRRFS 606

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357607161|gb|EHJ65372.1| calmodulin-binding protein trpl [Danaus plexippus]

 Score =  288 bits (736), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 136/225 (60%), Positives = 170/225 (75%), Gaps = 15/225 (6%)

Query: 158 VSQRADVILLEYLGVT------DNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKD 211
           VSQR DV L++  G        D  +T +QRG  P+YLE +VL+YV G+IW+ET E++ +
Sbjct: 383 VSQRVDVQLIQTFGPDWMVKDLDQELT-KQRGNGPTYLELVVLIYVVGFIWQETHEIYIE 441

Query: 212 GLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQL 271
           G+  YL++MWNFIDFTRN LYV V +LR  AY+QQ AEI+ +  ++F+ RE W+AFDPQL
Sbjct: 442 GIRSYLRNMWNFIDFTRNTLYVAVAILRLAAYIQQTAEIKKDPQTRFIPREQWDAFDPQL 501

Query: 272 IAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLN 331
           IAEGLFA AN+FSALKLVHLFSINPHLGPLQISLGRM+IDIVKFFFIY+LVL +FACGLN
Sbjct: 502 IAEGLFAAANIFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYSLVLFAFACGLN 561

Query: 332 QLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSF 376
           QLLWYF +LE++ CY        + P   P+W+    +C KWRSF
Sbjct: 562 QLLWYFADLEKRKCY--------VLPGGLPDWDHAGDSCMKWRSF 598

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350413466|ref|XP_003490000.1| PREDICTED: transient-receptor-potential-like protein-like [Bombus impatiens]

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 135/229 (58%), Positives = 169/229 (73%), Gaps = 14/229 (6%)

Query: 154 LLLLVSQRADVILLEYLGVTDNHIT-----GQQRGLAPSYLEYLVLLYVAGYIWEETCEV 208
           +L+LVSQRA+V +++  G             +QRG APS+LE +V+LYV G+IW+E  E 
Sbjct: 383 ILMLVSQRAEVEIVKIFGSEKAKRDIEMELARQRGAAPSFLEGVVVLYVLGFIWQEMREA 442

Query: 209 WKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFD 268
           + DGL  YL+DMWNFIDFT+N LY+   +LR  AY+QQ+AEI  N  +  + RE W+ FD
Sbjct: 443 YVDGLKAYLRDMWNFIDFTKNFLYIATVVLRTAAYLQQRAEINQNPMAALVPRETWSDFD 502

Query: 269 PQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFAC 328
           PQLIAEGLFA AN+FSALKL+HLFSINPHLGPLQISLGRM+IDIVKFFFIYTLVL +FAC
Sbjct: 503 PQLIAEGLFAAANIFSALKLIHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFAC 562

Query: 329 GLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN 377
           GLNQLLWYFTELER+ CY  ++         DP+W+    +C +WR F+
Sbjct: 563 GLNQLLWYFTELERRKCYDNIA---------DPSWDPTSESCLRWRRFS 602

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158284739|ref|XP_307827.4| AGAP010630-PA [Anopheles gambiae str. PEST] gi|157020898|gb|EAA03611.5| AGAP010630-PA [Anopheles gambiae str. PEST]

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 134/224 (59%), Positives = 167/224 (74%), Gaps = 13/224 (5%)

Query: 158 VSQRADVILLEYLGVTDNHIT-----GQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDG 212
           VSQRA+V ++   G             +QRG  P+YLE LV++YV G+IWEET E++K+G
Sbjct: 367 VSQRAEVQVVLLFGTESMKRALQEELARQRGNGPTYLECLVVIYVMGFIWEETQEIFKEG 426

Query: 213 LYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLI 272
           +  YL++MWNFIDF+RN LY  V +LR +AY+QQ ++I A+ S+ ++ REHW+ FDPQLI
Sbjct: 427 IRSYLRNMWNFIDFSRNFLYCCVALLRVVAYIQQTSQISADPSTAYIAREHWDDFDPQLI 486

Query: 273 AEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQ 332
           AEGLFA AN+FSALKLVHLFSINPHLGPLQISLGRM+IDIVKFFFIY+LVL +FACGLNQ
Sbjct: 487 AEGLFAAANIFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYSLVLFAFACGLNQ 546

Query: 333 LLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSF 376
           LLWYF +LE+  CYS     G L     P+W+    AC KWR F
Sbjct: 547 LLWYFADLEKSKCYSL---KGGL-----PDWDNQGDACMKWRRF 582

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405977232|gb|EKC41691.1| Transient receptor potential-gamma protein [Crassostrea gigas]

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 161/379 (42%), Positives = 221/379 (58%), Gaps = 72/379 (18%)

Query: 37  LTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTEL 96
           LT +EK+YLL+VERGD  + R+ +    +   +++NCVDPLGRSAL +AIE EN+EM E+
Sbjct: 74  LTNDEKQYLLAVERGDVPSTRQYLSMGVQTG-LNVNCVDPLGRSALLIAIENENIEMIEV 132

Query: 97  LIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHK------------------------ 132
           L+   VE  D+LL AIN E VEAVEL+L + E+  K                        
Sbjct: 133 LLNYNVEVGDSLLHAINEENVEAVELILNH-EVATKGEESRRHERFVSHPNCQQLLASLW 191

Query: 133 -EGEPYLSRK-------------------------PPKS--------------CQNTAY- 151
            EG P   R                           PKS              C + +Y 
Sbjct: 192 YEGLPGFRRHNIVSRLLITFMIGFTFPLLSLFYLIAPKSRFGKLIRKPFIKFICHSASYI 251

Query: 152 --RILLLLVSQRADVI---LLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETC 206
              +LL+LVSQR ++    L + +    + I  +QRG   + +E+++L YVAG IW E  
Sbjct: 252 TFLVLLILVSQRVEIPIPGLWDKVATDLDKIQLEQRGAPATMVEWMILAYVAGLIWAEIK 311

Query: 207 EVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNA 266
           ++W +G + Y+ DMWN +DF  N LY+  F LR +AY+Q Q EI+ N++S  L R+ WNA
Sbjct: 312 QLWDEGAHDYVHDMWNILDFVTNSLYIATFTLRLIAYLQVQKEIQENKASAQLERKDWNA 371

Query: 267 FDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSF 326
           +DP LIAE LFA AN+FS+LKL+++F++NPHLGPLQISLGRMI+DI+KF  +Y LVL SF
Sbjct: 372 YDPNLIAESLFAAANIFSSLKLIYIFTVNPHLGPLQISLGRMILDIMKFAVLYGLVLFSF 431

Query: 327 ACGLNQLLWYFTELERKDC 345
           ACGLN L WY+  L  ++C
Sbjct: 432 ACGLNHLYWYYATLREREC 450

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|307180174|gb|EFN68207.1| Transient-receptor-potential-like protein [Camponotus floridanus]

 Score =  285 bits (728), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 139/229 (60%), Positives = 169/229 (73%), Gaps = 14/229 (6%)

Query: 154 LLLLVSQRADVILLEYLGVTD-----NHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEV 208
           +L+LVSQRA+V ++  LG  +          +QRG AP+ LE +V+LYV G++WEE  EV
Sbjct: 115 ILMLVSQRAEVEIVRLLGTQEMKRNLEAYLARQRGAAPTPLEGIVVLYVFGFVWEEIREV 174

Query: 209 WKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFD 268
           + DGL  YL+DMWNFIDFTRN+LY+   +LR  AY+QQ+ EI  + S+  + RE+W  FD
Sbjct: 175 YIDGLKSYLRDMWNFIDFTRNMLYLATGVLRLAAYLQQRTEIGIDPSAALIPRENWGDFD 234

Query: 269 PQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFAC 328
           PQLIAEGLFA ANVFSALKLVHLFSINPHLGPLQISLGRM+IDIVKFFFIYTLVL +FAC
Sbjct: 235 PQLIAEGLFAAANVFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFAC 294

Query: 329 GLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN 377
           GLNQLLWYF ELE+  CYS M          DP+W+    AC +WR F+
Sbjct: 295 GLNQLLWYFAELEKNKCYSGML---------DPSWDAGSDACLRWRRFS 334

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014963|ref|XP_003691482.1| PREDICTED: transient-receptor-potential-like protein-like [Apis florea]

 Score =  283 bits (724), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 137/230 (59%), Positives = 169/230 (73%), Gaps = 16/230 (6%)

Query: 154 LLLLVSQRADVILLEYLGVTDNHITG------QQRGLAPSYLEYLVLLYVAGYIWEETCE 207
           +L+LVSQRA+V ++   G +D  I        +QRG APS LE +V+LYV G+IW+E  E
Sbjct: 388 ILMLVSQRAEVEIVRLFG-SDETIRNMDIELTKQRGAAPSLLECIVVLYVIGFIWQEMRE 446

Query: 208 VWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAF 267
            + DGL  YL+DMWNFIDFTRN LY+   +LR +AY+QQ+AEI  N S+  + RE+W+ F
Sbjct: 447 AYIDGLKAYLRDMWNFIDFTRNFLYIATAILRLVAYLQQKAEIRDNPSAALIPRENWSDF 506

Query: 268 DPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFA 327
           DPQLIAEGLFA AN+ SALKL+HLFSINPHLGPLQISLGRM+IDIVKFFFIYTLVL +FA
Sbjct: 507 DPQLIAEGLFAAANINSALKLIHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFA 566

Query: 328 CGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN 377
           CGLNQLLWYF ELER+ CY   +         DP+W+     C +WR F+
Sbjct: 567 CGLNQLLWYFAELERQKCYVDFA---------DPSWDPASDNCLRWRRFS 607

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782400|ref|XP_003250136.1| PREDICTED: LOW QUALITY PROTEIN: transient-receptor-potential-like protein [Apis mellifera]

 Score =  283 bits (723), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 136/230 (59%), Positives = 170/230 (73%), Gaps = 16/230 (6%)

Query: 154 LLLLVSQRADVILLEYLGVTDNHITG------QQRGLAPSYLEYLVLLYVAGYIWEETCE 207
           +L+LVSQRA++ ++   G +D  I        +QRG APS LE++V+LYV G+IW+E  E
Sbjct: 386 ILMLVSQRAEIEIVRLFG-SDETIKNMDIELTKQRGAAPSLLEFIVILYVIGFIWQEMRE 444

Query: 208 VWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAF 267
            + DGL  YL+DMWNFIDFTRN LY+   +LR +AY+QQ+AEI  N S+  + RE+W+ F
Sbjct: 445 AYIDGLKGYLRDMWNFIDFTRNFLYIATAILRLVAYLQQKAEIRDNPSAALIPRENWSDF 504

Query: 268 DPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFA 327
           DPQLIAEGLFA AN+ SALKL+HLFSINPHLGPLQISLGRM+IDIVKFFFIYTLVL +FA
Sbjct: 505 DPQLIAEGLFAAANINSALKLIHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFA 564

Query: 328 CGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSFN 377
           CGLNQLLWYF ELER+ CY   +         DP+W+     C +WR F+
Sbjct: 565 CGLNQLLWYFAELERQKCYVDFA---------DPSWDPASDNCLRWRRFS 605

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
FB|FBgn0005614	1124	trpl "trp-like" [Drosophila me	0.578	0.193	0.575	1.6e-95
FB|FBgn0032593	1128	trpgamma "trpgamma" [Drosophil	0.599	0.200	0.456	2.2e-74
WB|WBGene00006615	886	trp-2 [Caenorhabditis elegans	0.511	0.217	0.484	1.3e-64
ZFIN|ZDB-GENE-040812-1	1045	trpc5a "transient receptor pot	0.405	0.146	0.496	2.2e-53
UNIPROTKB|Q91ZM0	893	Trpc4 "Short transient recepto	0.413	0.174	0.472	2.9e-53
MGI|MGI:109525	974	Trpc4 "transient receptor pote	0.413	0.160	0.472	4.3e-53
UNIPROTKB|F1Q223	977	TRPC4 "Uncharacterized protein	0.413	0.159	0.472	4.4e-53
UNIPROTKB|F1RS35	977	TRPC4 "Uncharacterized protein	0.413	0.159	0.472	4.4e-53
RGD|621276	977	Trpc4 "transient receptor pote	0.413	0.159	0.472	4.4e-53
UNIPROTKB|P79100	979	TRPC4 "Short transient recepto	0.413	0.159	0.472	4.4e-53

FB|FBgn0005614 trpl "trp-like" [Drosophila melanogaster (taxid:7227)]

 Score = 669 (240.6 bits), Expect = 1.6e-95, Sum P(2) = 1.6e-95
 Identities = 133/231 (57%), Positives = 160/231 (69%)

Query:   151 YRILLLLVSQRADVILLEYLGVT--DNHITGQ---QRGLAPSYLEYLVLLYVAGYIWEET 205
             +  +L+LVSQRAD   +   G T     +  Q   QRG  PS LE +V++YV G++WEE 
Sbjct:   387 FLFILILVSQRADDDFVRIFGTTRMKKELAEQELRQRGQTPSKLELIVVMYVIGFVWEEV 446

Query:   206 CEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWN 265
              E++  G+  YL++MWNFIDF RN LYV V  LRA AY+QQ  EI  +    ++ RE W+
Sbjct:   447 QEIFAVGMKSYLRNMWNFIDFLRNSLYVSVMCLRAFAYIQQATEIARDPQMAYIPREKWH 506

Query:   266 AFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLS 325
              FDPQLIAEGLFA ANVFSALKLVHLFSINPHLGPLQISLGRM+IDIVKFFFIYTLVL +
Sbjct:   507 DFDPQLIAEGLFAAANVFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFA 566

Query:   326 FACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACSKWRSF 376
             FACGLNQLLWYF  LE+  CY        + P  + +W  H  +C KWR F
Sbjct:   567 FACGLNQLLWYFAALEKSKCY--------VLPGGEADWGSHGDSCMKWRRF 609

GO:0005516 "calmodulin binding" evidence=ISS;NAS;IDA;TAS

GO:0005886 "plasma membrane" evidence=ISS;IDA;TAS

GO:0008086 "light-activated voltage-gated calcium channel activity" evidence=NAS;IMP

GO:0007603 "phototransduction, visible light" evidence=IMP

GO:0035997 "rhabdomere microvillus membrane" evidence=IDA

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0016028 "rhabdomere" evidence=IDA;NAS;TAS

GO:0009416 "response to light stimulus" evidence=TAS

GO:0019722 "calcium-mediated signaling" evidence=IMP;TAS

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0005262 "calcium channel activity" evidence=IGI;ISS;IDA

GO:0006816 "calcium ion transport" evidence=ISS;IDA

GO:0070588 "calcium ion transmembrane transport" evidence=IGI

GO:0071454 "cellular response to anoxia" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0016027 "inaD signaling complex" evidence=IPI

GO:0005261 "cation channel activity" evidence=TAS

GO:0015279 "store-operated calcium channel activity" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0007589 "body fluid secretion" evidence=IMP

GO:0007605 "sensory perception of sound" evidence=IMP

FB|FBgn0032593 trpgamma "trpgamma" [Drosophila melanogaster (taxid:7227)]

 Score = 556 (200.8 bits), Expect = 2.2e-74, Sum P(2) = 2.2e-74
 Identities = 111/243 (45%), Positives = 156/243 (64%)

Query:   146 CQNTAY---RILLLLVSQRADVILLEYLGVTDNHITGQ------QRGLAPSYLEYLVLLY 196
             C + +Y     LL+L SQR +  +  +     + +         +RG  P+++E+L+L +
Sbjct:   358 CHSASYFTFLFLLMLASQRIETFIGGWFFADSSGMLNTMEELPTKRGAKPTFIEWLILAW 417

Query:   197 VAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESS 256
             V+G IW E  ++W  GL  YL DMWN IDF  N LYV    LR +++ Q Q E+  N  +
Sbjct:   418 VSGLIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLYVATVALRVVSFFQVQKEMIYNSHA 477

Query:   257 KFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFF 316
               L RE W+A+DP LI+EGLF+ AN+FS+LKLV++FS+NPHLGPLQ+SL RM++DI+KFF
Sbjct:   478 TDLPRERWDAWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFF 537

Query:   317 FIYTLVLLSFACGLNQLLWYFTELERKDC--YSTMSSTGALNPSEDPNWEEHDAACSKWR 374
             F+Y LVL +F  GLNQLLWY+ +LE+K C   S MS+   +N + DPN      AC  WR
Sbjct:   538 FLYVLVLFAFGSGLNQLLWYYADLEKKRCPEVSPMSALLNMNGTNDPN------ACIVWR 591

Query:   375 SFN 377
              F+
Sbjct:   592 RFS 594

GO:0005262 "calcium channel activity" evidence=ISS

GO:0050908 "detection of light stimulus involved in visual perception" evidence=ISS

GO:0006816 "calcium ion transport" evidence=ISS

GO:0016028 "rhabdomere" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005261 "cation channel activity" evidence=IDA;NAS

GO:0006812 "cation transport" evidence=NAS

GO:0009416 "response to light stimulus" evidence=TAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

WB|WBGene00006615 trp-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 507 (183.5 bits), Expect = 1.3e-64, Sum P(2) = 1.3e-64
 Identities = 96/198 (48%), Positives = 139/198 (70%)

Query:   151 YRILLLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWK 210
             + ILL++ SQR +VI  + +  TD+    + RG  P+ +E  + L+V G IW E  ++W+
Sbjct:   381 FLILLIMASQRMNVI--DNILRTDDVDRKETRGPPPTIIECAIFLWVLGLIWVEIKQLWE 438

Query:   211 DGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQ-QQAEIEANES--SKFLGREHWNAF 267
              GLY Y +++WN +DF  N LY+    LR +AYVQ +Q  + AN    ++ L R  W+A+
Sbjct:   439 CGLYNYCRNLWNILDFITNSLYLCTTALRVVAYVQVEQEALRANSVHIARHLPRRDWDAW 498

Query:   268 DPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFA 327
             DP L++E  FA AN+FS+LKLVH+F+++PHLGPL+ISLGRM+IDIVKFF +Y LVL +FA
Sbjct:   499 DPTLLSECFFATANIFSSLKLVHIFTVSPHLGPLKISLGRMVIDIVKFFMVYALVLFAFA 558

Query:   328 CGLNQLLWYFTELERKDC 345
             CGLNQLLWY+  + + +C
Sbjct:   559 CGLNQLLWYYASMRQNEC 576

GO:0005262 "calcium channel activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

ZFIN|ZDB-GENE-040812-1 trpc5a "transient receptor potential cation channel, subfamily C, member 5a" [Danio rerio (taxid:7955)]

 Score = 395 (144.1 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
 Identities = 81/163 (49%), Positives = 109/163 (66%)

Query:   182 RGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAM 241
             +G  P+ +E+++L +V G+IW E  E+W  G   Y+ D WN +DF  N LY+    L+ +
Sbjct:   399 QGPPPTVVEWMILPWVLGFIWAEIKEMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIV 458

Query:   242 AYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPL 301
             AYV+         SS+   RE W  + P LIAE LFA AN+FS+L+L+ LF+ N HLGPL
Sbjct:   459 AYVKYN-------SSR--PREEWEMWHPTLIAEALFAIANIFSSLRLISLFTANSHLGPL 509

Query:   302 QISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKD 344
             QISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E E  D
Sbjct:   510 QISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYY-ETEAAD 551

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|Q91ZM0 Trpc4 "Short transient receptor potential channel 4" [Rattus norvegicus (taxid:10116)]

 Score = 396 (144.5 bits), Expect = 2.9e-53, Sum P(2) = 2.9e-53
 Identities = 78/165 (47%), Positives = 111/165 (67%)

Query:   181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
             ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct:   394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query:   241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
             +A+V+  A    N       RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct:   454 VAFVKYSA---LNP------RESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query:   301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
             LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct:   505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC 549

GO:0005262 "calcium channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:109525 Trpc4 "transient receptor potential cation channel, subfamily C, member 4" [Mus musculus (taxid:10090)]

 Score = 396 (144.5 bits), Expect = 4.3e-53, Sum P(2) = 4.3e-53
 Identities = 78/165 (47%), Positives = 111/165 (67%)

Query:   181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
             ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct:   394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query:   241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
             +A+V+  A    N       RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct:   454 VAFVKYSA---LNP------RESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query:   301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
             LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct:   505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC 549

GO:0005216 "ion channel activity" evidence=IEA

GO:0005262 "calcium channel activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0005901 "caveola" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=ISO

GO:0008013 "beta-catenin binding" evidence=ISO

GO:0009986 "cell surface" evidence=ISO

GO:0014051 "gamma-aminobutyric acid secretion" evidence=IMP

GO:0015279 "store-operated calcium channel activity" evidence=ISO;IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=ISO

GO:0030863 "cortical cytoskeleton" evidence=ISO

GO:0034704 "calcium channel complex" evidence=ISO

GO:0043234 "protein complex" evidence=IPI

GO:0045121 "membrane raft" evidence=IDA

GO:0045296 "cadherin binding" evidence=ISO

GO:0051924 "regulation of calcium ion transport" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

GO:0070509 "calcium ion import" evidence=ISO

GO:0070588 "calcium ion transmembrane transport" evidence=IMP

GO:0070679 "inositol 1,4,5 trisphosphate binding" evidence=IDA

UNIPROTKB|F1Q223 TRPC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 396 (144.5 bits), Expect = 4.4e-53, Sum P(2) = 4.4e-53
 Identities = 78/165 (47%), Positives = 111/165 (67%)

Query:   181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
             ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct:   394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query:   241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
             +A+V+  A    N       RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct:   454 VAFVKYSA---LNP------RESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query:   301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
             LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct:   505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC 549

GO:0016021 "integral to membrane" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

UNIPROTKB|F1RS35 TRPC4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 396 (144.5 bits), Expect = 4.4e-53, Sum P(2) = 4.4e-53
 Identities = 78/165 (47%), Positives = 111/165 (67%)

Query:   181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
             ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct:   394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query:   241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
             +A+V+  A    N       RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct:   454 VAFVKYSA---LNP------RESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query:   301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
             LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct:   505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC 549

GO:0070679 "inositol 1,4,5 trisphosphate binding" evidence=IEA

GO:0070509 "calcium ion import" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0034704 "calcium channel complex" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0015279 "store-operated calcium channel activity" evidence=IEA

GO:0014051 "gamma-aminobutyric acid secretion" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005901 "caveola" evidence=IEA

RGD|621276 Trpc4 "transient receptor potential cation channel, subfamily C, member 4" [Rattus norvegicus (taxid:10116)]

 Score = 396 (144.5 bits), Expect = 4.4e-53, Sum P(2) = 4.4e-53
 Identities = 78/165 (47%), Positives = 111/165 (67%)

Query:   181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
             ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct:   394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query:   241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
             +A+V+  A    N       RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct:   454 VAFVKYSA---LNP------RESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query:   301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
             LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct:   505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC 549

GO:0005262 "calcium channel activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0005901 "caveola" evidence=IEA;ISO

GO:0005911 "cell-cell junction" evidence=IEA;ISO

GO:0006816 "calcium ion transport" evidence=IDA

GO:0008013 "beta-catenin binding" evidence=IEA;ISO

GO:0009986 "cell surface" evidence=IEA;ISO

GO:0014051 "gamma-aminobutyric acid secretion" evidence=IEA;ISO

GO:0015279 "store-operated calcium channel activity" evidence=IEA;ISO

GO:0016323 "basolateral plasma membrane" evidence=IEA;ISO

GO:0030863 "cortical cytoskeleton" evidence=IEA;ISO

GO:0034704 "calcium channel complex" evidence=IEA;ISO

GO:0043234 "protein complex" evidence=ISO

GO:0045121 "membrane raft" evidence=ISO

GO:0045296 "cadherin binding" evidence=IEA;ISO

GO:0051924 "regulation of calcium ion transport" evidence=IMP

GO:0070509 "calcium ion import" evidence=IEA;ISO

GO:0070588 "calcium ion transmembrane transport" evidence=ISO

GO:0070679 "inositol 1,4,5 trisphosphate binding" evidence=IEA;ISO

UNIPROTKB|P79100 TRPC4 "Short transient receptor potential channel 4" [Bos taurus (taxid:9913)]

 Score = 396 (144.5 bits), Expect = 4.4e-53, Sum P(2) = 4.4e-53
 Identities = 78/165 (47%), Positives = 111/165 (67%)

Query:   181 QRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA 240
             ++G  P+ +E+++L +V G+IW E  ++W  GL  Y+ D WN +DF  N LY+    L+ 
Sbjct:   394 RQGPPPTIVEWMILPWVLGFIWGEIKQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKI 453

Query:   241 MAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGP 300
             +A+V+  A    N       RE W+ + P L+AE LFA AN+FS+L+L+ LF+ N HLGP
Sbjct:   454 VAFVKYSA---LNP------RESWDMWHPTLVAEALFAIANIFSSLRLISLFTANSHLGP 504

Query:   301 LQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDC 345
             LQISLGRM++DI+KF FIY LVLL+FA GLNQL +Y+ E +   C
Sbjct:   505 LQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYEETKGLSC 549

GO:0070679 "inositol 1,4,5 trisphosphate binding" evidence=IEA

GO:0070509 "calcium ion import" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0034704 "calcium channel complex" evidence=IEA

GO:0030863 "cortical cytoskeleton" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0015279 "store-operated calcium channel activity" evidence=IEA

GO:0014051 "gamma-aminobutyric acid secretion" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0008013 "beta-catenin binding" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005901 "caveola" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P48994	TRPL_DROME	No assigned EC number	0.5833	0.5702	0.1912	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	377
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	5e-47
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	4e-16
pfam00520	194	pfam00520, Ion_trans, Ion transport protein	8e-13
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-05
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-05
pfam08016	423	pfam08016, PKD_channel, Polycystin cation channel	2e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	7e-04
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	8e-04
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	0.004

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score =  170 bits (432), Expect = 5e-47
 Identities = 96/326 (29%), Positives = 138/326 (42%), Gaps = 52/326 (15%)

Query: 35  TPLTLEEKKYLLSVERGDTA---TVRKCIKRAYRNHH---IDINCVDPLGR--SALTL-A 85
           TPL L  K+  + + R   A     +K +             +  +D   R  S L L  
Sbjct: 259 TPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLLSLYWLEELDGWRRKQSVLELIV 318

Query: 86  IEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKS 145
           +    L+  EL  +  + P   L Q     F+                            
Sbjct: 319 VFVIGLKFPELSDMYLIAPLSRLGQFKWKPFI------------------------KFIF 354

Query: 146 CQNTAYRIL--LLLVSQRADVILLEYLGVTDNHITGQQRGLAPSYLEYLVLLYVAGYIWE 203
              +    L  ++  S          L V          GL  + LE L++ +V G    
Sbjct: 355 HSASYLYFLYLIIFTSVAYYRPTRTDLRV---------TGLQQTPLEMLIVTWVDGLRLG 405

Query: 204 ETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREH 263
           E   +W  G++ Y+  +WN +DF  N  Y+  F+ R  A +         ++   L REH
Sbjct: 406 EEKLIWLGGIFEYIHQLWNILDFGMNSFYLATFLDRPFAILF------VTQAFLVL-REH 458

Query: 264 WNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMII-DIVKFFFIYTLV 322
           W  FDP LI E LFA A V S L L+++F  N HLGPLQI +GRMI+ DI++F FIY +V
Sbjct: 459 WLRFDPTLIEEALFAFALVLSWLNLLYIFRGNQHLGPLQIMIGRMILGDILRFLFIYAVV 518

Query: 323 LLSFACGLNQLLWYFTELERKDCYST 348
           L  FACGLNQL  Y+ EL+  +C + 
Sbjct: 519 LFGFACGLNQLYQYYDELKLNECSNP 544

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 79.7 bits (197), Expect = 4e-16
 Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 19/151 (12%)

Query: 30  MPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSAL-TLAIEG 88
           +P   +PL+ EEK +L + ERGD A+V + ++   +   ++INC D LGRSAL   AIE 
Sbjct: 7   VPAEESPLSDEEKAFLPAAERGDLASVYRDLEEPKK---LNINCPDRLGRSALFVAAIEN 63

Query: 89  ENLEMTELLIVMGVEPK--DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSC 146
           ENLE+TELL+ +       D LL AI+ E+V+AVE +L +     ++  P        + 
Sbjct: 64  ENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTS 123

Query: 147 QNTA-------------YRILLLLVSQRADV 164
           + T              Y I+ LL+ + A V
Sbjct: 124 EFTPGITALHLAAHRQNYEIVKLLLERGASV 154

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein

 Score = 66.2 bits (162), Expect = 8e-13
 Identities = 28/148 (18%), Positives = 47/148 (31%), Gaps = 30/148 (20%)

Query: 191 YLVLLYVAGYIWEETCEVWKDGL-YRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAE 249
            L  ++   +  E   +    G   +Y +  WN +DF   L  ++  +L  +        
Sbjct: 1   ILDYVFTVIFTLEMLLKFIALGFKRKYFRSPWNILDFLVVLPSLVSLILFLLG------- 53

Query: 250 IEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMI 309
                                    GL     +   L+L+ L    P L  L  SLGR +
Sbjct: 54  ----------------------EDSGLLRVLRLLRLLRLLRLLRRFPGLRTLLQSLGRSL 91

Query: 310 IDIVKFFFIYTLVLLSFACGLNQLLWYF 337
             ++    +  L+L  FA    QL    
Sbjct: 92  KSLLNLLLLLLLLLFIFAIIGVQLFGGE 119

This family contains Sodium, Potassium, Calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not the Pfam family due to it lacking the first four helices. Length = 194

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 19/99 (19%)

Query: 35  TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMT 94
           TPL        L+   G    V+  ++     +  D+N  D  GR+ L LA +  +LE+ 
Sbjct: 9   TPL-------HLAASNGHLEVVKLLLE-----NGADVNAKDNDGRTPLHLAAKNGHLEIV 56

Query: 95  ELLIVMGVEPKD-------ALLQAINSEFVEAVELLLEY 126
           +LL+  G +           L  A  +  ++ V+LLL++
Sbjct: 57  KLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKH 95

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 40.7 bits (96), Expect = 7e-05
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 14/89 (15%)

Query: 46  LSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK 105
           L+ + G+   V+  +         D+N  D    +AL LA    NLE+ +LL+  G +  
Sbjct: 3   LAAKNGNLELVKLLL-----EKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGADVN 55

Query: 106 D-------ALLQAINSEFVEAVELLLEYE 127
                   AL  A  +  +E V+LLLE+ 
Sbjct: 56  AKDKDGNTALHLAARNGNLEIVKLLLEHG 84

Length = 91

>gnl|CDD|219699 pfam08016, PKD_channel, Polycystin cation channel

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 29/145 (20%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 188 YLEYLVLL-YVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQ 246
            L  ++ L +V  ++  E  ++ ++G  RYL+ +WN +D     L V+V +L        
Sbjct: 209 LLCEIIFLVFVLYFVVAEITKIRREG-PRYLRSVWNLLDLAIVALSVVVIVLHIYRDFLA 267

Query: 247 QAEIEANESSKFLGREHWNAFDP---QLIAEGLFAGANVF-SALKLVHLFSINPHLGPLQ 302
               +  E+S       +  FD          +     +F + LKL  +   N  +    
Sbjct: 268 TQLWKQVEASP----VDFTDFDRVARLDQLYRIILAFLLFLTWLKLFKVLRFNRTMSLFT 323

Query: 303 ISLGRMIIDIVKFFFIYTLVLLSFA 327
            +L R + +++ F  ++ ++ L++A
Sbjct: 324 KTLSRALKELLGFAVMFVILFLAYA 348

This family contains the cation channel region of PKD1 and PKD2 proteins. Length = 423

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 48 VERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLI 98
             G    V+  ++       +DIN  D  G +AL +A E  NLE+ +LL+
Sbjct: 9  AISGRLELVKYLLE-----KGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 46  LSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP 104
           L+   G+   V+  ++     H  D+N  D  G +AL LA    NLE+ +LL+  G + 
Sbjct: 34  LAARNGNLEIVKLLLE-----HGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADI 87

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 35.7 bits (83), Expect = 0.004
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 12/91 (13%)

Query: 82  LTLAIEGENLEMTELLIVMGVEP-----KDALLQAINSEFVEAVELLLEYE---EIVHKE 133
           L LA +  NLE+ +LL+  G +        AL  A  +  +E V+LLLE+        K+
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDKD 60

Query: 134 GEPYLSRKPPKSCQNTAYRILLLLVSQRADV 164
           G   L      + +N    I+ LL+   AD+
Sbjct: 61  GNTALH----LAARNGNLEIVKLLLEHGADI 87

Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	377
KOG3609|consensus	822		100.0
TIGR00870	743	trp transient-receptor-potential calcium channel p	100.0
KOG0510|consensus	929		99.97
KOG3676|consensus	782		99.95
KOG3614|consensus	1381		99.87
KOG4412|consensus	226		99.79
KOG4412|consensus	226		99.77
PHA02791	284	ankyrin-like protein; Provisional	99.76
KOG0509|consensus	600		99.7
PHA02743	166	Viral ankyrin protein; Provisional	99.69
KOG0512|consensus	228		99.69
PHA02875	413	ankyrin repeat protein; Provisional	99.67
PHA02791	284	ankyrin-like protein; Provisional	99.66
PHA02884	300	ankyrin repeat protein; Provisional	99.66
PLN03223	1634	Polycystin cation channel protein; Provisional	99.66
PHA02741	169	hypothetical protein; Provisional	99.66
PHA02875	413	ankyrin repeat protein; Provisional	99.65
PF08016	425	PKD_channel: Polycystin cation channel; InterPro:	99.64
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.63
PHA02878	477	ankyrin repeat protein; Provisional	99.62
PHA02878	477	ankyrin repeat protein; Provisional	99.62
KOG0508|consensus	615		99.62
KOG0508|consensus	615		99.62
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.61
PHA02859	209	ankyrin repeat protein; Provisional	99.61
PHA02874	434	ankyrin repeat protein; Provisional	99.6
PHA02946	446	ankyin-like protein; Provisional	99.6
PHA03100	480	ankyrin repeat protein; Provisional	99.58
PHA02859	209	ankyrin repeat protein; Provisional	99.58
PHA02874	434	ankyrin repeat protein; Provisional	99.58
KOG0509|consensus	600		99.57
PHA02917	661	ankyrin-like protein; Provisional	99.57
PHA03100	480	ankyrin repeat protein; Provisional	99.56
KOG4214|consensus	117		99.55
PHA02736	154	Viral ankyrin protein; Provisional	99.54
PHA03095	471	ankyrin-like protein; Provisional	99.54
PHA02946	446	ankyin-like protein; Provisional	99.54
KOG3599|consensus	798		99.53
PHA02795	437	ankyrin-like protein; Provisional	99.52
PHA02795	437	ankyrin-like protein; Provisional	99.52
KOG0510|consensus	929		99.51
PHA03095	471	ankyrin-like protein; Provisional	99.51
PHA02989	494	ankyrin repeat protein; Provisional	99.5
PHA02798	489	ankyrin-like protein; Provisional	99.5
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.5
PHA02989	494	ankyrin repeat protein; Provisional	99.49
PHA02798	489	ankyrin-like protein; Provisional	99.49
PHA02876	682	ankyrin repeat protein; Provisional	99.48
KOG0195|consensus	448		99.47
PHA02876	682	ankyrin repeat protein; Provisional	99.47
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.47
KOG0502|consensus	296		99.44
KOG0502|consensus	296		99.43
PHA02743	166	Viral ankyrin protein; Provisional	99.42
PHA02730	672	ankyrin-like protein; Provisional	99.4
KOG0195|consensus	448		99.4
PHA02917	661	ankyrin-like protein; Provisional	99.4
KOG1710|consensus	396		99.39
KOG0505|consensus	527		99.39
PHA02792	631	ankyrin-like protein; Provisional	99.39
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.39
PHA02792	631	ankyrin-like protein; Provisional	99.38
KOG4177|consensus	1143		99.38
PHA02730	672	ankyrin-like protein; Provisional	99.37
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.36
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.35
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.35
PHA02736	154	Viral ankyrin protein; Provisional	99.34
KOG0512|consensus	228		99.34
PHA02884	300	ankyrin repeat protein; Provisional	99.32
KOG4177|consensus	1143		99.31
PHA02741	169	hypothetical protein; Provisional	99.28
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.27
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.23
KOG0514|consensus	452		99.21
KOG0507|consensus	854		99.18
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.15
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.15
KOG0514|consensus	452		99.14
KOG0507|consensus	854		99.14
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.12
KOG3676|consensus	782		99.06
KOG0505|consensus	527		99.05
KOG0515|consensus	752		99.03
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.02
PF00520	200	Ion_trans: Ion transport protein calcium channel s	98.98
KOG4214|consensus	117		98.95
KOG4369|consensus	2131		98.92
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	98.79
PF13606	30	Ank_3: Ankyrin repeat	98.71
KOG1710|consensus	396		98.71
KOG0515|consensus	752		98.7
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	98.69
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	98.66
KOG0705|consensus	749		98.62
KOG0506|consensus	622		98.6
KOG0818|consensus	669		98.53
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.45
KOG4369|consensus	2131		98.39
KOG0783|consensus	1267		98.33
KOG0511|consensus	516		98.25
KOG0782|consensus	1004		98.21
PF13606	30	Ank_3: Ankyrin repeat	98.07
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.02
KOG2384|consensus	223		97.98
KOG0522|consensus	560		97.94
KOG0818|consensus	669		97.49
KOG0521|consensus	785		97.45
KOG0521|consensus	785		97.42
KOG0506|consensus	622		97.38
KOG0511|consensus	516		97.3
KOG0782|consensus	1004		97.17
KOG0783|consensus	1267		97.09
KOG0705|consensus	749		97.02
KOG2301|consensus	1592		96.98
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.94
KOG0522|consensus	560		96.9
KOG3609|consensus	822		96.87
KOG0520|consensus	975		96.54
KOG2384|consensus	223		95.98
KOG0520|consensus	975		95.74
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.38
KOG2505|consensus	591		94.86
KOG3733|consensus	566		93.18
KOG2302|consensus	1956		92.96
KOG2301|consensus	1592		92.9
KOG3713|consensus	477		92.33
KOG1545|consensus	507		90.04
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	89.99
KOG2302|consensus	1956		88.61
KOG2505|consensus	591		87.84
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	84.86
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	82.03
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	81.72
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	80.15

>KOG3609|consensus

Probab=100.00  E-value=1.9e-46  Score=381.35  Aligned_cols=340  Identities=38%  Similarity=0.619  Sum_probs=257.1

Q ss_pred             CCCCCCCC-CCCCCCHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy7030          25 TQPFDMPN-LPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVE  103 (377)
Q Consensus        25 ~~~~~~~~-~~~~l~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~  103 (377)
                      ..+..+.. -...++++|++++.|+++||...|++.|+.... ...|+||.|.-|+++|++|+.+.|.|+.++|++++.+
T Consensus         9 r~~~~~~~~~~~~l~~~e~~fL~a~E~gd~~~V~k~l~~~~~-~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~   87 (822)
T KOG3609|consen    9 RLKLSAIKEVDADLNEGEKGFLLAHENGDVPLVAKALEYKAV-SKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSE   87 (822)
T ss_pred             cccchhhcccccccchhhHHHHHHHHcCChHHHHHHHHhccc-cccchhccChHhhhceecccccccHHHHHHHhcCccc
Confidence            34444444 446789999999999999999999999998543 4589999999999999999999999999999998765


Q ss_pred             cC-------------------------------------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCC----
Q psy7030         104 PK-------------------------------------------DALLQAINSEFVEAVELLLEYEEIVHKEGEP----  136 (377)
Q Consensus       104 i~-------------------------------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~----  136 (377)
                      .+                                           ||+.+||..++.||+++|++.|+++.+..+-    
T Consensus        88 ~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~~~C~C  167 (822)
T KOG3609|consen   88 EGDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHDIRCEC  167 (822)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCcccccCc
Confidence            54                                           5555555555555555555555554321100    


Q ss_pred             ------CCCCCCccccccChHHHH-----Hhhh-----------------------------------------------
Q psy7030         137 ------YLSRKPPKSCQNTAYRIL-----LLLV-----------------------------------------------  158 (377)
Q Consensus       137 ------~~~t~lh~ac~~n~~~~l-----~~L~-----------------------------------------------  158 (377)
                            ...+-+|--..-|.|+++     +.|+                                               
T Consensus       168 ~~C~~~~~~dslhS~srin~yraLaSpa~i~LsS~DPiltAf~LS~eL~~La~~E~Efk~dY~~Ls~qcq~F~v~LLdq~  247 (822)
T KOG3609|consen  168 KTCKRETVTDSLHSLSRVNIYRALASPALIWLSSDDPILTAFALSWDLQQLASDELEFKEDYRDLSMQCQRFAVDLLDQA  247 (822)
T ss_pred             hHhhhccccCCcchHHHHHHHHHhhcHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                  000111221111333333     1111                                               


Q ss_pred             --hhhHHHHH-----------------H---------h---------------hcc-------------------cc---
Q psy7030         159 --SQRADVIL-----------------L---------E---------------YLG-------------------VT---  173 (377)
Q Consensus       159 --s~~~~~~l-----------------l---------~---------------y~~-------------------~p---  173 (377)
                        |.|++.++                 |         +               |.+                   +|   
T Consensus       248 r~s~Ele~iLn~~~~~~~~~~~~sl~RLklAIkyeqK~FVahpNcQq~L~siWy~g~R~~~~~~K~~~~~~~~~~~P~~~  327 (822)
T KOG3609|consen  248 RTSDELEMILNNRNNCPERMTRISLPRLKLAIKYEQKEFVAHPNCQQLLKSVWYSGWRRKGIKPKFDAWRFLRLCFPMPS  327 (822)
T ss_pred             cchHHHHHHHcCCCCCcccccccccHHHHHHHHHhhhheecCccHHHHHHHHHhhhhhhcchHHHHHHHHHHHHHhHHHH
Confidence              33444443                 0         0               110                   01   


Q ss_pred             --------------------------ccee-e----------------ecccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy7030         174 --------------------------DNHI-T----------------GQQRGLAPSYLEYLVLLYVAGYIWEETCEVWK  210 (377)
Q Consensus       174 --------------------------~~fi-F----------------~~~~~~~~~~~e~~~~~~~~~~~~~Ei~~~~~  210 (377)
                                                .+|+ |                ...++++|++.||+++.|++|++|+|++++|.
T Consensus       328 l~yllap~S~~G~~~r~PfmKFi~H~~Sy~~FL~LL~l~s~~~~~~~~~~~~g~~p~~vE~li~~wV~G~iw~E~k~lw~  407 (822)
T KOG3609|consen  328 LVYLLAPMSRKGTTMRKPFMKFIAHITSYLVFLILLILASLIGFYFAWTDSRGVTPQALEILIYLWVMGLIWEEIKELWR  407 (822)
T ss_pred             HHHHhCCCCcccchhhchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence                                      1111 1                23678999999999999999999999999999


Q ss_pred             cCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCChHHHHHHHHHHHHHHHHHHHHH
Q psy7030         211 DGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVH  290 (377)
Q Consensus       211 ~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~l~a~~~~l~~lrll~  290 (377)
                      .|.+.|++++||++|.+++.+|++++.+|.++++.....   +  +.+..|.+|.+.||++++++++|++.+|+++|+++
T Consensus       408 ~G~~~y~~~~Wn~lDf~m~siyl~s~~lr~~a~~~~~~~---~--~~~~~R~~W~~~dp~ll~E~lfAiA~V~S~lrl~~  482 (822)
T KOG3609|consen  408 VGRDGYLAFWWNWLDFAMISIYLASFILRAVAWGKREAF---D--PSSVDRMHWPSFDPSLLAEGLFAIANVLSFLKLFY  482 (822)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---c--ccccchhhCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999998765432   1  25689999999999999999999999999999999


Q ss_pred             hHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCCCCCcccCCcc
Q psy7030         291 LFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAAC  370 (377)
Q Consensus       291 ~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (377)
                      +++.|+.+||++++++||++|+++|++||.+|++||++|+++||+||.+.+++.|.-.++-+.-       .|++.-+.+
T Consensus       483 i~t~n~~lGPlqISlGrmv~Di~kF~~I~~lvl~aF~iGl~qLy~yy~~~~~~~~~~~~~~~~~-------~fsti~eS~  555 (822)
T KOG3609|consen  483 IFTMNPSLGPLQISLGRMVGDIYKFLFIFVLVLVAFSIGLNQLYDYYLNRKTMKIDQDYTKTTD-------SFSTIGESS  555 (822)
T ss_pred             HhhccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccchHhhhhcchhhcccccccccccc-------ccccHHHHH
Confidence            9999999999999999999999999999999999999999999999999998888333222211       455544444


Q ss_pred             e--ecccCC
Q psy7030         371 S--KWRSFN  377 (377)
Q Consensus       371 ~--~~~~~~  377 (377)
                      -  +|.|||
T Consensus       556 ~tLFWsiFg  564 (822)
T KOG3609|consen  556 KTLFWSIFG  564 (822)
T ss_pred             HHHHHHHHh
Confidence            4  787775

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=100.00  E-value=1.2e-39  Score=348.04  Aligned_cols=307  Identities=39%  Similarity=0.589  Sum_probs=243.9

Q ss_pred             CCCCCCCHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHH-HHHHcCCHHHHHHHHhCCCC-------
Q psy7030          32 NLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALT-LAIEGENLEMTELLIVMGVE-------  103 (377)
Q Consensus        32 ~~~~~l~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh-~A~~~g~~~iv~~Ll~~ga~-------  103 (377)
                      ..++++++.|++|+.||++||.+.++.+|+++   .+.|+|+.|..|+|||| .|+.+++.+++++|+++|+.       
T Consensus         9 ~~~~~~~~~~~~~l~A~~~g~~~~v~~lL~~~---~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~   85 (743)
T TIGR00870         9 AEESPLSDEEKAFLPAAERGDLASVYRDLEEP---KKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGDTL   85 (743)
T ss_pred             ccCCCCCHHHHHHHHHHHcCCHHHHHHHhccc---cccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHH
Confidence            34467899999999999999999999999863   38899999999999999 89999999999999888730       


Q ss_pred             ------------------------------------------cChHHHHHHhcCCHHHHHHHHhcCCccCCCC-------
Q psy7030         104 ------------------------------------------PKDALLQAINSEFVEAVELLLEYEEIVHKEG-------  134 (377)
Q Consensus       104 ------------------------------------------i~tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~-------  134 (377)
                                                                ..||||+|+..|+.+++++|+++|++++...       
T Consensus        86 Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~  165 (743)
T TIGR00870        86 LHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVK  165 (743)
T ss_pred             HHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhc
Confidence                                                      0189999999999999999999999887421       


Q ss_pred             ------CCCCCCCCccccccChHHHHHhhhhhhH----------------------------------------------
Q psy7030         135 ------EPYLSRKPPKSCQNTAYRILLLLVSQRA----------------------------------------------  162 (377)
Q Consensus       135 ------~~~~~t~lh~ac~~n~~~~l~~L~s~~~----------------------------------------------  162 (377)
                            ...|.+|||.|+..++.+.+.+|.++++                                              
T Consensus       166 ~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~  245 (743)
T TIGR00870       166 SQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRD  245 (743)
T ss_pred             CCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCC
Confidence                  1246677766655544444422221110                                              


Q ss_pred             ---------------------------HHHHHh----------------------hcc----------------------
Q psy7030         163 ---------------------------DVILLE----------------------YLG----------------------  171 (377)
Q Consensus       163 ---------------------------~~~ll~----------------------y~~----------------------  171 (377)
                                                 ...+|+                      |..                      
T Consensus       246 ~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~  325 (743)
T TIGR00870       246 SKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLLSLYWLEELDGWRRKQSVLELIVVFVIGLK  325 (743)
T ss_pred             hHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchHhHhhhccccCCcccccccHHHHHHHHHHhhc
Confidence                                       000010                      000                      


Q ss_pred             cc--------------------------------cceee-------e-c--------ccCCCchHHHHHHHHHHHHHHHH
Q psy7030         172 VT--------------------------------DNHIT-------G-Q--------QRGLAPSYLEYLVLLYVAGYIWE  203 (377)
Q Consensus       172 ~p--------------------------------~~fiF-------~-~--------~~~~~~~~~e~~~~~~~~~~~~~  203 (377)
                      .|                                ++|++       . .        ..+.+|++.|++++.|+.+++++
T Consensus       326 ~p~~~~~~~~~P~~~l~~~kw~pf~kf~~~~~~~~~fl~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  405 (743)
T TIGR00870       326 FPELSDMYLIAPLSRLGQFKWKPFIKFIFHSASYLYFLYLIIFTSVAYYRPTRTDLRVTGLQQTPLEMLIVTWVDGLRLG  405 (743)
T ss_pred             ChHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCCCcchhhHHHHHHHHHHH
Confidence            01                                11111       0 0        12347899999999999999999


Q ss_pred             HHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCChHHHHHHHHHHHHHH
Q psy7030         204 ETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVF  283 (377)
Q Consensus       204 Ei~~~~~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~l~a~~~~l  283 (377)
                      |+++++.+|.+.|+++.||++|.+++.++++++++|..........       ....+..|...++..+++.++|+++++
T Consensus       406 e~~~~~~~g~~~y~~~~wn~~d~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~a~~~~l  478 (743)
T TIGR00870       406 EEKLIWLGGIFEYIHQLWNILDFGMNSFYLATFLDRPFAILFVTQA-------FLVLREHWLRFDPTLIEEALFAFALVL  478 (743)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhhh-------hhhhhhhhcccCchhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999998775432211       234577888889999999999999999


Q ss_pred             HHHHHHHhHccCCCCchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccc
Q psy7030         284 SALKLVHLFSINPHLGPLQISLGRMII-DIVKFFFIYTLVLLSFACGLNQLLWYFTELERKDCYST  348 (377)
Q Consensus       284 ~~lrll~~~~~~~~~Gp~~~mi~~m~~-dl~~F~~i~~vv~~aFava~~~L~~~y~~~~~~~~~~~  348 (377)
                      +|+|+++|+++++.+||+++|++||++ |+++|+++|++|++|||+|++.+|++|.+...+.|++.
T Consensus       479 ~~~rll~~~~~~~~lGp~~i~l~~mi~~dl~~F~~i~~v~l~aF~~~~~~l~~~~~~~~~~~~~~~  544 (743)
T TIGR00870       479 SWLNLLYIFRGNQHLGPLQIMIGRMILGDILRFLFIYAVVLFGFACGLNQLYQYYDELKLNECSNP  544 (743)
T ss_pred             HHHHHHHHHhhchhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence            999999999999999999999999998 99999999999999999999999999988777777554

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0510|consensus

Probab=99.97  E-value=1.5e-30  Score=263.23  Aligned_cols=266  Identities=16%  Similarity=0.159  Sum_probs=205.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCc--------ChHHHHHHh
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIV-MGVEP--------KDALLQAIN  113 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~-~ga~i--------~tpLh~A~~  113 (377)
                      .++.||++|+.+.+..||..     |+++|.+++++.||||.||..|+.++++-|++ .|...        .||||.|++
T Consensus       276 pLH~a~r~G~~~svd~Ll~~-----Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~  350 (929)
T KOG0510|consen  276 PLHYAARQGGPESVDNLLGF-----GASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAK  350 (929)
T ss_pred             hHHHHHHcCChhHHHHHHHc-----CCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhh
Confidence            47779999999999999987     89999999999999999999999999988888 44322        189999999


Q ss_pred             cCCHHHHHHHHhcCCccCC--CCCCCCCCCCccccccChHHHHHhhhhhhHHHHH-------------------------
Q psy7030         114 SEFVEAVELLLEYEEIVHK--EGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL-------------------------  166 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~--~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l-------------------------  166 (377)
                      .||.+++++|++.|+..+.  +.|.+|.|+||.|+..|+..++..|.++|+++-.                         
T Consensus       351 ~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~~~~~~~p~~~~~~~  430 (929)
T KOG0510|consen  351 SGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDTRPDRCLPVFVHRSP  430 (929)
T ss_pred             cCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccccccccccHHHhhCC
Confidence            9999999999999988874  2368889999999888888888766666655511                         


Q ss_pred             ------------------------------------------------------Hhhcccc-------------------
Q psy7030         167 ------------------------------------------------------LEYLGVT-------------------  173 (377)
Q Consensus       167 ------------------------------------------------------l~y~~~p-------------------  173 (377)
                                                                            +|..++|                   
T Consensus       431 ~n~c~~~~~i~~~pe~~e~vlD~c~l~~~e~~~~~~~~Q~~~~~~~~~mv~~~~~eLL~HPL~ssfL~mKW~~~g~~~~~  510 (929)
T KOG0510|consen  431 FNKCPTTELIEPLPECFEIVLDFCILKSQERKDSPTPLQDEAAPILNIMVDKEQIELLEHPLSSSFLFMKWNRYGKYFHL  510 (929)
T ss_pred             CCCcchhhhhccchHHHHHHHHHHHHHHhhccCCCChhhhhhhhHHHHHhhhhHHHHhcChhHHHHHHHHHHHhhHHHHH
Confidence                                                                  1122333                   


Q ss_pred             ----cceee----------------e-------------------cccCCCchHHHHHHHHHHHHHHHHHHHHHHHcCcc
Q psy7030         174 ----DNHIT----------------G-------------------QQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLY  214 (377)
Q Consensus       174 ----~~fiF----------------~-------------------~~~~~~~~~~e~~~~~~~~~~~~~Ei~~~~~~g~~  214 (377)
                          ++++|                .                   ...+.+..+|-++++..++....+|+.|++.++. 
T Consensus       511 ~nL~~Y~lFlv~lT~Yv~~~~~~~~~n~~~~~~~~~~s~~se~lr~~~t~~i~~~~ili~~~i~~~~~~E~iQifqqk~-  589 (929)
T KOG0510|consen  511 NNLLIYSLFLVSLTIYVLLIKAGMAFNSSGTEIISKTSDHSEILRNNNTMLIAFCMILIFTSIILGILRECIQIFQQKR-  589 (929)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccccccccceeehhccchhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence                11122                0                   0112233567777777888889999999999997 


Q ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCChHHHHHHHHHHHHHHHHHHHHHhHcc
Q psy7030         215 RYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSI  294 (377)
Q Consensus       215 ~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~l~a~~~~l~~lrll~~~~~  294 (377)
                      +||.++-|++||+.+.+.+   +...-.+.                      .+.......+.|++++|.|++++.+++.
T Consensus       590 ~Y~~~i~Nimew~iyts~l---i~v~~~~~----------------------~~~~~~Q~~laa~aV~l~W~nllLmi~~  644 (929)
T KOG0510|consen  590 HYFMDIENIMEWFIYTSAL---ITVYPLFF----------------------EITAHLQWVLAAFAVLLGWMNLLLMIGR  644 (929)
T ss_pred             HHHhhhHHHHHHHHHhhhh---heeehhhh----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            9999999999998866543   22221111                      0112233459999999999999999999


Q ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q psy7030         295 NPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTE  339 (377)
Q Consensus       295 ~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~~y~~  339 (377)
                      .+.+|.+++|+-++.+.++|++.+|.++++||+.+||+|++...+
T Consensus       645 ~p~~gIfvvM~~~I~ktflk~f~vfs~lliaF~lsFYVll~~~~e  689 (929)
T KOG0510|consen  645 FPVFGIFVVMLEVILKTFLKSFMVFSILLIAFGLSFYVLLNKSSE  689 (929)
T ss_pred             CCccceehHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeecCCCC
Confidence            999999999999999999999999999999999999999985544

>KOG3676|consensus

Probab=99.95  E-value=1.7e-26  Score=234.91  Aligned_cols=268  Identities=19%  Similarity=0.216  Sum_probs=201.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccc--------cCC---------------CCCcHHHHHHHcCCHHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINC--------VDP---------------LGRSALTLAIEGENLEMTELL   97 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~--------~D~---------------~G~TpLh~A~~~g~~~iv~~L   97 (377)
                      ++.||.|+.+.|.+.|+.||+.     |||||+        +|.               .|..||-.||.-++.|++++|
T Consensus       185 qSaLHiAIv~~~~~~V~lLl~~-----gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlL  259 (782)
T KOG3676|consen  185 QSALHIAIVNRDAELVRLLLAA-----GADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLL  259 (782)
T ss_pred             cchHHHHHHhccHHHHHHHHHc-----CCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHH
Confidence            4558899999999999999998     999882        222               367799999999999999999


Q ss_pred             HhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCc--cCCCCCCCCCCCCccccccChHHHHHhhh----------
Q psy7030          98 IVMGVEPK-------DALLQAINSEFVEAVELLLEYEEI--VHKEGEPYLSRKPPKSCQNTAYRILLLLV----------  158 (377)
Q Consensus        98 l~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~--~~~~~~~~~~t~lh~ac~~n~~~~l~~L~----------  158 (377)
                      +++|||++       |.||..+.....+|-++++++|++  ... .+..|-|||-.||+.+..++...+.          
T Consensus       260 l~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v-~N~qgLTPLtLAaklGk~emf~~ile~~k~~~W~Y  338 (782)
T KOG3676|consen  260 LAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV-RNNQGLTPLTLAAKLGKKEMFQHILERRKFTDWAY  338 (782)
T ss_pred             HhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc-cccCCCChHHHHHHhhhHHHHHHHHHhhcccceee
Confidence            99999986       999999999999999999999998  332 3477899999998887777652111          


Q ss_pred             ------------------------------hhhHHHHH-------Hh-----------hccccc---cee-e--------
Q psy7030         159 ------------------------------SQRADVIL-------LE-----------YLGVTD---NHI-T--------  178 (377)
Q Consensus       159 ------------------------------s~~~~~~l-------l~-----------y~~~p~---~fi-F--------  178 (377)
                                                    +++...++       |+           |.++..   ++| |        
T Consensus       339 GpvtsslYpL~~iDT~~n~~SvLeivvyg~~~eHl~Ll~~~i~~LL~~KW~~f~k~~f~~~~~~~~~y~i~ft~~~y~RP  418 (782)
T KOG3676|consen  339 GPVTSSLYPLNSIDTIGNENSVLEIVVYGIKNEHLELLDGPIEELLEDKWKAFGKKQFFMSLLIYLLYMICFTLAFYYRP  418 (782)
T ss_pred             cccccccccchhcccccchhhhhhhhhcCCcHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence                                          11111111       11           111111   111 1        


Q ss_pred             ------------ecccCCCchHHHHHHHHHHHHHHHHHHHHHHHcCccccccc-----cchHHHHHHHHHHHHHHHHHHH
Q psy7030         179 ------------GQQRGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKD-----MWNFIDFTRNLLYVLVFMLRAM  241 (377)
Q Consensus       179 ------------~~~~~~~~~~~e~~~~~~~~~~~~~Ei~~~~~~g~~~y~~~-----~WN~ld~~~l~l~~~~~~lr~~  241 (377)
                                  ....+..+...|.+.++|.+.+...|+..++.+|+..|+++     +++++-+...++.++..++++.
T Consensus       419 ~~~~~~~~~~~~~~~~~~~r~~~e~~~l~~~~~~~~~~~~~if~~~~~~~~~~~~~~~~~~v~~~~~~~l~l~~~~~~i~  498 (782)
T KOG3676|consen  419 ALEQAKLLDEAYINDYDELRLAGETLTLLGGILFLFCELPDIFLQGLPAYNGQLIDGPLFHVLGFLQAVLVLVSPVLRLG  498 (782)
T ss_pred             ccccccchhhccccCchhhhhhhhHHHhhhhHhhhhhhhHhHHhcccHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHH
Confidence                        01122245778899999999999999999999998777665     3444444444444444444443


Q ss_pred             HHHHHHHHHHhhcccccccccccccCChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHH-HHHHHHHHHHH
Q psy7030         242 AYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMI-IDIVKFFFIYT  320 (377)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~-~dl~~F~~i~~  320 (377)
                      ...                           ....+++++..++|..+|+|+|.++.+||+++||.+|+ +|++||++||+
T Consensus       499 ~~~---------------------------~~~~~lvfAl~lgW~~~Lyf~Rgfq~~Gpf~~MIykmI~~DL~RF~~IY~  551 (782)
T KOG3676|consen  499 AIK---------------------------WELALLVFALVLGWKNLLYFTRGFQLTGPFVIMIYKMIFGDLFRFLLIYL  551 (782)
T ss_pred             HHH---------------------------HHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHH
Confidence            321                           12359999999999999999999999999999999998 99999999999


Q ss_pred             HHHHHHHHHHHhhhccccccc
Q psy7030         321 LVLLSFACGLNQLLWYFTELE  341 (377)
Q Consensus       321 vv~~aFava~~~L~~~y~~~~  341 (377)
                      ||++|||+|||.+|..++..+
T Consensus       552 Vfl~GFsqAfy~if~~~~~~~  572 (782)
T KOG3676|consen  552 VFLVGFSQAFYSIFQTCDRDS  572 (782)
T ss_pred             HHHHHHHHHHHHHHcCCCccc
Confidence            999999999999999987765

>KOG3614|consensus

Probab=99.87  E-value=1e-22  Score=215.78  Aligned_cols=154  Identities=24%  Similarity=0.453  Sum_probs=140.9

Q ss_pred             ecccCCCchHHHHHHHHHHHHHHHHHHHHHH-------HcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7030         179 GQQRGLAPSYLEYLVLLYVAGYIWEETCEVW-------KDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIE  251 (377)
Q Consensus       179 ~~~~~~~~~~~e~~~~~~~~~~~~~Ei~~~~-------~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~  251 (377)
                      +.+..+.|+++||+++.|++.+.++|+||++       .++.+-||.++||.+|++++.+|++++++|+...        
T Consensus       814 Lv~~~~~Ps~~Ew~~~~~iftl~~E~vRq~~~se~~~l~~kv~v~f~d~wN~~d~~ai~~F~vG~~~Rl~~~--------  885 (1381)
T KOG3614|consen  814 LVDFQPSPSMWEWILFAWIFTLFLEEVRQIFISESGLLPQKVRVYFADFWNLIDLLAILLFLVGPVLRLLPI--------  885 (1381)
T ss_pred             eeccCCCCCccchhHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhhheeEecCc--------
Confidence            6788889999999999999999999999997       4556789999999999999999999999998551        


Q ss_pred             hhcccccccccccccCChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7030         252 ANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLN  331 (377)
Q Consensus       252 ~~~~~~~~~~~~w~~~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~  331 (377)
                                      +....+|+++|+.++++++|++.|+.+|+.+||+++|++||++|++.|+++++|+++|||||. 
T Consensus       886 ----------------~~~~~GRvIl~~d~i~~t~rLl~~f~V~~~lGPyI~mv~kMm~dmf~flfllaV~LlsfGVar-  948 (1381)
T KOG3614|consen  886 ----------------DSIYSGRVILCFDFILFTLRLLHYFTVSKQLGPYIVMVKKMMKDMFFFLFLLAVVLLSFGVAR-  948 (1381)
T ss_pred             ----------------cceecceeeeeehHHHHHHHHhhheeeccccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh-
Confidence                            112346789999999999999999999999999999999999999999999999999999999 


Q ss_pred             hhhccccccccccccccccCCCCCCCCCCCCCcccCCcce--ecccCC
Q psy7030         332 QLLWYFTELERKDCYSTMSSTGALNPSEDPNWEEHDAACS--KWRSFN  377 (377)
Q Consensus       332 ~L~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  377 (377)
                                          ++++.|+|.+.|.....+..  |||+||
T Consensus       949 --------------------QaIl~P~e~~~w~l~R~i~y~PYlmifG  976 (1381)
T KOG3614|consen  949 --------------------QAILRPDEPRHWWLFRNIFYWPYLMLFG  976 (1381)
T ss_pred             --------------------hhhcCCCCCchHHHHHHHHHHHHHHHhc
Confidence                                88889999999999999888  999987

>KOG4412|consensus

Probab=99.79  E-value=1.6e-19  Score=154.68  Aligned_cols=113  Identities=18%  Similarity=0.191  Sum_probs=53.4

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCcC-------hHHHHHHhcC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVM-GVEPK-------DALLQAINSE  115 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~-ga~i~-------tpLh~A~~~g  115 (377)
                      ++.||.-|+.+++..||+.    .+..+|.+|..||||||+||..|+.++|+.|+.+ |+|+|       ||||||+.+|
T Consensus        42 LHwa~S~g~~eiv~fLlsq----~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~  117 (226)
T KOG4412|consen   42 LHWACSFGHVEIVYFLLSQ----PNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKG  117 (226)
T ss_pred             eeeeeecCchhHHHHHHhc----CCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCC
Confidence            3335555555555555432    2444444444455555555555555555544444 44443       4455555444


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhh
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                      ..|++++|+++|+.++.++ ..|.||||-|+.-++.+.+..|.+.+
T Consensus       118 r~eIaqlLle~ga~i~~kD-~~~qtplHRAAavGklkvie~Li~~~  162 (226)
T KOG4412|consen  118 RLEIAQLLLEKGALIRIKD-KQGQTPLHRAAAVGKLKVIEYLISQG  162 (226)
T ss_pred             hhhHHHHHHhcCCCCcccc-cccCchhHHHHhccchhhHHHHHhcC
Confidence            4455444444444444332 44444444444444444444444333

>KOG4412|consensus

Probab=99.77  E-value=1.6e-19  Score=154.69  Aligned_cols=118  Identities=19%  Similarity=0.278  Sum_probs=108.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      ++|+-||..|+.++|+.|+.+    .|+|+|.++.+|+|+||+|+.+|..+++++|+++|+.++       ||||.|+..
T Consensus        74 tPlhia~s~g~~evVk~Ll~r----~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAav  149 (226)
T KOG4412|consen   74 TPLHIAASNGNDEVVKELLNR----SGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAV  149 (226)
T ss_pred             chhhhhhhcCcHHHHHHHhcC----CCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhc
Confidence            458999999999999999998    499999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      |..+++++|++.|+.+|.. |++|+||||.|-.++..++..+|.+++++.
T Consensus       150 Gklkvie~Li~~~a~~n~q-Dk~G~TpL~~al~e~~~d~a~lLV~~gAd~  198 (226)
T KOG4412|consen  150 GKLKVIEYLISQGAPLNTQ-DKYGFTPLHHALAEGHPDVAVLLVRAGADT  198 (226)
T ss_pred             cchhhHHHHHhcCCCCCcc-cccCccHHHHHHhccCchHHHHHHHhccce
Confidence            9999999999999999865 499999999994446788888888888764

>PHA02791 ankyrin-like protein; Provisional

Probab=99.76  E-value=2.4e-18  Score=163.19  Aligned_cols=119  Identities=17%  Similarity=0.132  Sum_probs=95.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A~  112 (377)
                      ++.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++        ||||+|+
T Consensus        62 ~TpLh~Aa~~g~~eiV~lLL~~-----Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa  136 (284)
T PHA02791         62 EFPLHQAATLEDTKIVKILLFS-----GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAV  136 (284)
T ss_pred             CCHHHHHHHCCCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHH
Confidence            4567789999999999999886     89999999999999999999999999999999888763        7888888


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      ..|+.+++++|++++++...  ...|.||||+||..++.+++..|.++|++...
T Consensus       137 ~~g~~eivk~LL~~~~~~~d--~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~  188 (284)
T PHA02791        137 MLNDVSIVSYFLSEIPSTFD--LAILLSCIHITIKNGHVDMMILLLDYMTSTNT  188 (284)
T ss_pred             HcCCHHHHHHHHhcCCcccc--cccCccHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence            88888888888887654421  13477888888888888888777767665444

>KOG0509|consensus

Probab=99.70  E-value=2.6e-17  Score=164.57  Aligned_cols=120  Identities=20%  Similarity=0.206  Sum_probs=109.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHHHh
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQAIN  113 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A~~  113 (377)
                      ..++.|++.|+.+.|+.+++.    .|.++|..|.+|-|+||+|+.+|+.+++++|+++|+++|        ||||+|++
T Consensus        46 ~~~v~A~q~G~l~~v~~lve~----~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar  121 (600)
T KOG0509|consen   46 DDIVKATQYGELETVKELVES----EGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAAR  121 (600)
T ss_pred             hhhhhHhhcchHHHHHHHHhh----cCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHH
Confidence            347899999999999999996    399999999999999999999999999999999999998        99999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      +|+..+|++|+++|||++.++ ..|.+++|.||..++.-.+..+.+++++..+
T Consensus       122 ~G~~~vv~lLlqhGAdpt~~D-~~G~~~lHla~~~~~~~~vayll~~~~d~d~  173 (600)
T KOG0509|consen  122 NGHISVVDLLLQHGADPTLKD-KQGLTPLHLAAQFGHTALVAYLLSKGADIDL  173 (600)
T ss_pred             cCcHHHHHHHHHcCCCCceec-CCCCcHHHHHHHhCchHHHHHHHHhcccCCC
Confidence            999999999999999999764 8999999999999988888766666655554

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.69  E-value=6.4e-17  Score=141.92  Aligned_cols=119  Identities=16%  Similarity=0.091  Sum_probs=101.3

Q ss_pred             hHHHHHHHHHcCCHHHHH----HHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHH---HHHHHhCCCCcC-------
Q psy7030          40 EEKKYLLSVERGDTATVR----KCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEM---TELLIVMGVEPK-------  105 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~----~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~i---v~~Ll~~ga~i~-------  105 (377)
                      ....++.||+.|+.+.++    .|++.     |.++|.+|..|+||||+|+..|+.+.   +++|+++|++++       
T Consensus        20 ~~~~l~~a~~~g~~~~l~~~~~~l~~~-----g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g   94 (166)
T PHA02743         20 EQNTFLRICRTGNIYELMEVAPFISGD-----GHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTG   94 (166)
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHHHhhc-----chhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCC
Confidence            345788999999995444    45554     89999999999999999999998654   899999998775       


Q ss_pred             -hHHHHHHhcCCHHHHHHHHh-cCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         106 -DALLQAINSEFVEAVELLLE-YEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       106 -tpLh~A~~~g~~eiv~~Ll~-~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                       ||||+|+..|+.+++++|++ .|++++..+ ..|.||||+|+..++.+++..|.++++++
T Consensus        95 ~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d-~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~  154 (166)
T PHA02743         95 NTLLHIAASTKNYELAEWLCRQLGVNLGAIN-YQHETAYHIAYKMRDRRMMEILRANGAVC  154 (166)
T ss_pred             CcHHHHHHHhCCHHHHHHHHhccCCCccCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence             99999999999999999995 899998754 79999999999999999997777776543

>KOG0512|consensus

Probab=99.69  E-value=1.3e-16  Score=136.11  Aligned_cols=109  Identities=17%  Similarity=0.143  Sum_probs=97.4

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      ++.++.|+++|....|+.||+.    +.-.+|++|.+|.||||-|+.+||.+|++.|+..|++++       ||||.||.
T Consensus        64 ~rl~lwaae~nrl~eV~~lL~e----~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAck  139 (228)
T KOG0512|consen   64 IRLLLWAAEKNRLTEVQRLLSE----KANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACK  139 (228)
T ss_pred             HHHHHHHHhhccHHHHHHHHHh----ccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhc
Confidence            5568899999999999999998    245579999999999999999999999999999999886       99999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccCh-HHHH
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTA-YRIL  154 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~-~~~l  154 (377)
                      .++.+++..||++|+|+|... +..+||||.||..++ +..+
T Consensus       140 WnN~~va~~LLqhgaDVnA~t-~g~ltpLhlaa~~rn~r~t~  180 (228)
T KOG0512|consen  140 WNNFEVAGRLLQHGADVNAQT-KGLLTPLHLAAGNRNSRDTL  180 (228)
T ss_pred             ccchhHHHHHHhccCcccccc-cccchhhHHhhcccchHHHH
Confidence            999999999999999999764 667899999998754 4444

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.67  E-value=2e-16  Score=158.00  Aligned_cols=118  Identities=19%  Similarity=0.120  Sum_probs=66.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.++++.|+++|++++       ||||+|+..|
T Consensus       105 pL~~A~~~~~~~iv~~Ll~~-----gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g  179 (413)
T PHA02875        105 PLHLATILKKLDIMKLLIAR-----GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKG  179 (413)
T ss_pred             HHHHHHHhCCHHHHHHHHhC-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Confidence            44555555555555555554     56666556566666666666666666666666555543       5666666666


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHH
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVI  165 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~  165 (377)
                      +.+++++|+++|++++..+...+.|++|+|+..++.+++..|.++|++..
T Consensus       180 ~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n  229 (413)
T PHA02875        180 DIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCN  229 (413)
T ss_pred             CHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcc
Confidence            66666666666665554433333455555666566665555555555443

>PHA02791 ankyrin-like protein; Provisional

Probab=99.66  E-value=4.1e-16  Score=147.98  Aligned_cols=113  Identities=14%  Similarity=0.134  Sum_probs=100.9

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.|+.|++.|+.++++.|++.     |+++|.+|  |+||||+|+..|+.+++++|+++|++++       ||||+|+.
T Consensus        31 ~TpLh~Aa~~g~~eiv~~Ll~~-----ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~  103 (284)
T PHA02791         31 HSALYYAIADNNVRLVCTLLNA-----GALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVD  103 (284)
T ss_pred             CcHHHHHHHcCCHHHHHHHHHC-----cCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            4567889999999999999997     99998765  7899999999999999999999999876       99999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCC-CCCCccccccChHHHHHhhhhhh
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYL-SRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~-~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                      .|+.+++++|+++|++++..+ ..| .||||.|+..++.+++..|.+++
T Consensus       104 ~g~~eivk~Ll~~gadin~~~-~~g~~TpL~~Aa~~g~~eivk~LL~~~  151 (284)
T PHA02791        104 SGNMQTVKLFVKKNWRLMFYG-KTGWKTSFYHAVMLNDVSIVSYFLSEI  151 (284)
T ss_pred             cCCHHHHHHHHHCCCCcCccC-CCCCcHHHHHHHHcCCHHHHHHHHhcC
Confidence            999999999999999998765 455 58999999999999997666553

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.66  E-value=4.7e-16  Score=148.00  Aligned_cols=106  Identities=16%  Similarity=0.151  Sum_probs=95.3

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCccccc----CCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHH
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCV----DPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQ  110 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~----D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~  110 (377)
                      .++.|++.|+.++++.||+.     |+|+|.+    |..|.||||+|+..|+.+++++|+++|++++        ||||.
T Consensus        36 lL~~A~~~~~~eivk~LL~~-----GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~  110 (300)
T PHA02884         36 ILYSSIKFHYTDIIDAILKL-----GADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYI  110 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHC-----CCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHH
Confidence            46678899999999999997     9999987    4689999999999999999999999999886        99999


Q ss_pred             HHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHH
Q psy7030         111 AINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l  154 (377)
                      |+..|+.+++++|+++|++++..+ ..|.||+|.|+..++.++.
T Consensus       111 Aa~~~~~eivklLL~~GAdin~kd-~~G~TpL~~A~~~~~~~~~  153 (300)
T PHA02884        111 SVLHGCLKCLEILLSYGADINIQT-NDMVTPIELALMICNNFLA  153 (300)
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHhCChhHH
Confidence            999999999999999999999754 7899999999876544443

>PLN03223 Polycystin cation channel protein; Provisional

Probab=99.66  E-value=1.1e-15  Score=162.68  Aligned_cols=150  Identities=19%  Similarity=0.224  Sum_probs=114.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHcC-----ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHhh
Q psy7030         187 SYLEYLVLLYVAGYIWEETCEVWKDG-----LYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAE--------IEAN  253 (377)
Q Consensus       187 ~~~e~~~~~~~~~~~~~Ei~~~~~~g-----~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~--------~~~~  253 (377)
                      -.+|+++++++++++++|+++++++|     .++||+++|||+|++.++|.++++++++.........        ++.+
T Consensus      1176 LacEIIFVLFILYfIyrEIkEI~k~KK~RG~~laYFKSfWNwLEIl~IlLS~AAIvLYFvf~~~~astf~~dIrynIYK~ 1255 (1634)
T PLN03223       1176 FAMEILLAIGAVYSVYEEAMDFGSSKKTRGSYLAYFLSGWNYVDFASIGLHLATIMMWFVFSWSYARAFEPDIHYDIYKN 1255 (1634)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcchhhhhhhhh
Confidence            47999999999999999999998654     4699999999999999999999999987543221111        1111


Q ss_pred             cc--cccc---cccccccC-----------ChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHH
Q psy7030         254 ES--SKFL---GREHWNAF-----------DPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFF  317 (377)
Q Consensus       254 ~~--~~~~---~~~~w~~~-----------~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~  317 (377)
                      ..  ..+.   ....++..           +.......+.++.+++.|+|+++++++||+++.+..+++++++|+..|++
T Consensus      1256 ls~sa~fl~Lq~pg~l~d~nd~F~sf~~La~~~q~Y~aL~GIlIFLsiLKfLRLLRFNPrL~vLt~TLrrAapDLa~F~I 1335 (1634)
T PLN03223       1256 LSASANFTALRIPNELPEMNDMFLEMKNLVDYFQWYMTLSGINIILLLGRILKLMDFQPRLGVITRTLWLAGADLMHFFV 1335 (1634)
T ss_pred             hhhhcchhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence            00  0000   00001100           11222334778899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhcc
Q psy7030         318 IYTLVLLSFACGLNQLLWY  336 (377)
Q Consensus       318 i~~vv~~aFava~~~L~~~  336 (377)
                      +|++++++|++.-+.+|+.
T Consensus      1336 IF~IVF~AFAqLG~LLFGt 1354 (1634)
T PLN03223       1336 IFGMVFVGYAFIGHVIFGN 1354 (1634)
T ss_pred             HHHHHHHHHHHHHHHHhcc
Confidence            9999999999888888874

>PHA02741 hypothetical protein; Provisional

Probab=99.66  E-value=7.1e-16  Score=135.62  Aligned_cols=121  Identities=17%  Similarity=0.105  Sum_probs=103.1

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhh-ccCCCCcccccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCcC--------h
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRA-YRNHHIDINCVDPLGRSALTLAIEGEN----LEMTELLIVMGVEPK--------D  106 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~-~~~~g~dvn~~D~~G~TpLh~A~~~g~----~~iv~~Ll~~ga~i~--------t  106 (377)
                      .++.|+.|++.|+.++++.|+... ...+|+++|.+|..|+||||+|+..|+    .+++++|+++|++++        |
T Consensus        21 g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~T  100 (169)
T PHA02741         21 GENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDT  100 (169)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCC
Confidence            345788899999999999986531 112478999999999999999999999    589999999998765        9


Q ss_pred             HHHHHHhcCCHHHHHHHHh-cCCccCCCCCCCCCCCCccccccChHHHHHhhhhhh
Q psy7030         107 ALLQAINSEFVEAVELLLE-YEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       107 pLh~A~~~g~~eiv~~Ll~-~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                      |||+|+..++.+++++|++ .|++++.. +..|+||||.|+..++.+++..|.+.+
T Consensus       101 pLh~A~~~~~~~iv~~Ll~~~g~~~~~~-n~~g~tpL~~A~~~~~~~iv~~L~~~~  155 (169)
T PHA02741        101 ALHLAAHRRDHDLAEWLCCQPGIDLHFC-NADNKSPFELAIDNEDVAMMQILREIV  155 (169)
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCcC-CCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence            9999999999999999997 58988865 478999999999999999886666443

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.65  E-value=5.5e-16  Score=154.86  Aligned_cols=116  Identities=22%  Similarity=0.157  Sum_probs=73.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      ..++.|++.|+.++++.|++.     |+|+|.++.+|.||||+|+..|+.+++++|+++|++++       ||||.|+..
T Consensus         4 ~~L~~A~~~g~~~iv~~Ll~~-----g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~   78 (413)
T PHA02875          4 VALCDAILFGELDIARRLLDI-----GINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEE   78 (413)
T ss_pred             hHHHHHHHhCCHHHHHHHHHC-----CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHC
Confidence            456667777777777777775     77777777777777777777777777777777776543       566666666


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      |+.++++.|+++|++.+...+..|.||||.||..++.+++..|.++|+
T Consensus        79 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~ga  126 (413)
T PHA02875         79 GDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGA  126 (413)
T ss_pred             CCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCC
Confidence            666666666665555443333445556666555555555544443333

>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys

Probab=99.64  E-value=3.7e-15  Score=149.74  Aligned_cols=149  Identities=23%  Similarity=0.371  Sum_probs=122.4

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcccccccc
Q psy7030         185 APSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEA---NESSKFLGR  261 (377)
Q Consensus       185 ~~~~~e~~~~~~~~~~~~~Ei~~~~~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~---~~~~~~~~~  261 (377)
                      ....+|+++++.+++++++|++++++.| ++|+++.||++|++.+++.++++++++.+.......+..   ++. .+.+.
T Consensus       209 ~~~~~~i~f~~~~l~~~~~ei~~i~~~g-~~y~~~~WN~~e~~ii~ls~~~i~~~~~~~~~~~~~~~~~~~~~~-~fv~f  286 (425)
T PF08016_consen  209 FVLLCEILFVLFVLYFLYREIKKIRREG-RAYFKSFWNWLELLIILLSLAVIVLYFYRMILASEALKQYRENPR-SFVDF  286 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc-ccCCH
Confidence            3356799999999999999999999999 599999999999999999999999998876655443322   111 11111


Q ss_pred             cccccCChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q psy7030         262 EHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYF  337 (377)
Q Consensus       262 ~~w~~~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~~y  337 (377)
                      .+  ........+.+.|+.+++.|+|++++++++|+++.+..+++++.+|+..|+++++++++|||.+.+.+|+++
T Consensus       287 ~~--~a~~~~~~~~l~a~~vfl~~lrll~~l~f~~~~~~~~~tl~~a~~~l~~f~~~~~i~~~~fa~~g~l~fG~~  360 (425)
T PF08016_consen  287 QE--LAQWDQLYRYLLAFLVFLLWLRLLKLLRFNRRLSLLSRTLRRAAKDLLGFFVIFLIIFLAFAQAGYLLFGSY  360 (425)
T ss_pred             HH--HHHHHHHHHHHHHHHHHHHHHHHhhheeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            00  001234566799999999999999999999999999999999999999999999999999999999999864

Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.63  E-value=8.3e-16  Score=166.21  Aligned_cols=119  Identities=21%  Similarity=0.218  Sum_probs=99.5

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAI  112 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~  112 (377)
                      ....++.||..|+.+.++.|++.     |+|+|.+|.+|+||||+|+.+|+.+++++|+++|++++       ||||.|+
T Consensus       525 ~~~~L~~Aa~~g~~~~l~~Ll~~-----G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~  599 (823)
T PLN03192        525 MASNLLTVASTGNAALLEELLKA-----KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAI  599 (823)
T ss_pred             chhHHHHHHHcCCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHH
Confidence            34678889999999999999987     99999999999999999999999999999999999886       7777554


Q ss_pred             -------------------------------hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhh
Q psy7030         113 -------------------------------NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       113 -------------------------------~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                                                     ..|+.++++.|+++|+++|..+ ..|+||||.|+..++.+++..|.++|
T Consensus       600 ~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~G  678 (823)
T PLN03192        600 SAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSED-HQGATALQVAMAEDHVDMVRLLIMNG  678 (823)
T ss_pred             HhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHCCcHHHHHHHHHcC
Confidence                                           5555566666777888887653 78899999999999999887777676


Q ss_pred             HHH
Q psy7030         162 ADV  164 (377)
Q Consensus       162 ~~~  164 (377)
                      ++.
T Consensus       679 Adv  681 (823)
T PLN03192        679 ADV  681 (823)
T ss_pred             CCC
Confidence            653

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.62  E-value=9.8e-16  Score=156.10  Aligned_cols=119  Identities=19%  Similarity=0.148  Sum_probs=98.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.++++.|+++|++++       ||||+|+.
T Consensus       169 ~tpLh~A~~~~~~~iv~~Ll~~-----gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~  243 (477)
T PHA02878        169 NTALHYATENKDQRLTELLLSY-----GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVG  243 (477)
T ss_pred             CCHHHHHHhCCCHHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            4567789999999999999987     89999999999999999999999999999999998886       89999987


Q ss_pred             c-CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         114 S-EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       114 ~-g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      . ++.+++++|+++|++++..++..|.||||.|+  ++.+.+..|.++|++.+.
T Consensus       244 ~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~--~~~~~v~~Ll~~gadin~  295 (477)
T PHA02878        244 YCKDYDILKLLLEHGVDVNAKSYILGLTALHSSI--KSERKLKLLLEYGADINS  295 (477)
T ss_pred             hcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHHc--cCHHHHHHHHHCCCCCCC
Confidence            5 68899999999999998776567899999984  456667677767766554

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.62  E-value=1.3e-15  Score=155.22  Aligned_cols=117  Identities=21%  Similarity=0.199  Sum_probs=87.9

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHH------------------------------
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLE------------------------------   92 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~------------------------------   92 (377)
                      +|+.||+.|+.++++.|++.     |+|+|.+|..|+||||+||..|+.+                              
T Consensus        40 PLh~A~~~g~~e~vk~Ll~~-----gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~  114 (477)
T PHA02878         40 PLHQAVEARNLDVVKSLLTR-----GHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNV  114 (477)
T ss_pred             hHHHHHHcCCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCH
Confidence            47789999999999999987     8899999999999999988776543                              


Q ss_pred             ----------------------------------HHHHHHhCCCCcC--------hHHHHHHhcCCHHHHHHHHhcCCcc
Q psy7030          93 ----------------------------------MTELLIVMGVEPK--------DALLQAINSEFVEAVELLLEYEEIV  130 (377)
Q Consensus        93 ----------------------------------iv~~Ll~~ga~i~--------tpLh~A~~~g~~eiv~~Ll~~~~~~  130 (377)
                                                        ++++|+++|++++        ||||+|+..|+.+++++|+++|+++
T Consensus       115 ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~  194 (477)
T PHA02878        115 EIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV  194 (477)
T ss_pred             HHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC
Confidence                                              5555556666653        7888888888888888888888777


Q ss_pred             CCCCCCCCCCCCccccccChHHHHHhhhhhhHHHH
Q psy7030         131 HKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVI  165 (377)
Q Consensus       131 ~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~  165 (377)
                      +..+ ..|.||||.|+..++.+++..|..+|++..
T Consensus       195 n~~d-~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in  228 (477)
T PHA02878        195 NIPD-KTNNSPLHHAVKHYNKPIVHILLENGASTD  228 (477)
T ss_pred             CCcC-CCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            7543 667788888777777777766665554443

>KOG0508|consensus

Probab=99.62  E-value=4.9e-16  Score=150.18  Aligned_cols=109  Identities=17%  Similarity=0.159  Sum_probs=57.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +++..||-.||.++|+.|++.     |+|++..|+.|+|.||+||.+||.+|+++|++.|+|+|       ||||.|+..
T Consensus       119 tPLraACfDG~leivKyLvE~-----gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEs  193 (615)
T KOG0508|consen  119 TPLRAACFDGHLEIVKYLVEH-----GADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAES  193 (615)
T ss_pred             ccHHHHHhcchhHHHHHHHHc-----CCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhc
Confidence            445555555555555555543     55555555555555555555555555555555555554       555555555


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLL  157 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L  157 (377)
                      |+.|++++|+++|+.+..+  .+|.|||-.|+..+..+++..|
T Consensus       194 G~vdivq~Ll~~ga~i~~d--~~GmtPL~~Aa~tG~~~iVe~L  234 (615)
T KOG0508|consen  194 GSVDIVQLLLKHGAKIDVD--GHGMTPLLLAAVTGHTDIVERL  234 (615)
T ss_pred             ccHHHHHHHHhCCceeeec--CCCCchHHHHhhhcchHHHHHH
Confidence            5555555555555555443  3355555555555555555333

>KOG0508|consensus

Probab=99.62  E-value=6.8e-16  Score=149.18  Aligned_cols=115  Identities=19%  Similarity=0.246  Sum_probs=106.5

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      +-.|+..||.++|+.|+++     |+++|.......|||.-||-.||.+++++|+++|+|++       |+||+|+.+||
T Consensus        88 LWaAsaAGHl~vVk~L~~~-----ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh  162 (615)
T KOG0508|consen   88 LWAASAAGHLEVVKLLLRR-----GASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGH  162 (615)
T ss_pred             hhHHhccCcHHHHHHHHHh-----cCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCc
Confidence            5568899999999999998     99999888888899999999999999999999999996       99999999999


Q ss_pred             HHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         117 VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      .+++++|++.|+|+|++. ..|+|+||.++++++.+++..|.++++..
T Consensus       163 ~~I~qyLle~gADvn~ks-~kGNTALH~caEsG~vdivq~Ll~~ga~i  209 (615)
T KOG0508|consen  163 VDIAQYLLEQGADVNAKS-YKGNTALHDCAESGSVDIVQLLLKHGAKI  209 (615)
T ss_pred             hHHHHHHHHhCCCcchhc-ccCchHHHhhhhcccHHHHHHHHhCCcee
Confidence            999999999999999875 88999999999999999998888766543

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.61  E-value=3.9e-15  Score=116.33  Aligned_cols=81  Identities=31%  Similarity=0.405  Sum_probs=74.9

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      |+.||+.|+.++++.|++.     +.+++.    |+||||+|+.+|+.+++++|+++|++++       ||||+|+..|+
T Consensus         1 L~~A~~~~~~~~~~~ll~~-----~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   71 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEK-----GADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGN   71 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHT-----TSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTH
T ss_pred             CHHHHHcCCHHHHHHHHHC-----cCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCC
Confidence            5789999999999999997     888876    9999999999999999999999999886       99999999999


Q ss_pred             HHHHHHHHhcCCccCCC
Q psy7030         117 VEAVELLLEYEEIVHKE  133 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~~~  133 (377)
                      .+++++|+++|++++.+
T Consensus        72 ~~~~~~Ll~~g~~~~~~   88 (89)
T PF12796_consen   72 LEIVKLLLEHGADVNIR   88 (89)
T ss_dssp             HHHHHHHHHTTT-TTSS
T ss_pred             HHHHHHHHHcCCCCCCc
Confidence            99999999999998754

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.61  E-value=2.7e-15  Score=136.53  Aligned_cols=118  Identities=16%  Similarity=0.119  Sum_probs=85.1

Q ss_pred             HHHHHHHHHcC--CHHHHHHHHHhhccCCCCcccccC-CCCCcHHHHHHHc---CCHHHHHHHHhCCCCcC-------hH
Q psy7030          41 EKKYLLSVERG--DTATVRKCIKRAYRNHHIDINCVD-PLGRSALTLAIEG---ENLEMTELLIVMGVEPK-------DA  107 (377)
Q Consensus        41 e~~ll~Aa~~g--~~~~v~~LL~~~~~~~g~dvn~~D-~~G~TpLh~A~~~---g~~~iv~~Ll~~ga~i~-------tp  107 (377)
                      ++.++.|+..+  +.++++.||+.     |+|+|.+| ..|+||||+|+..   ++.+++++|+++|++++       ||
T Consensus        52 ~TpLh~a~~~~~~~~eiv~~Ll~~-----gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~Tp  126 (209)
T PHA02859         52 ETPIFSCLEKDKVNVEILKFLIEN-----GADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNL  126 (209)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHC-----CCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCH
Confidence            34556677644  77888888876     88888876 4788888887653   46788888888888776       88


Q ss_pred             HHHHHh--cCCHHHHHHHHhcCCccCCCCCCCCCCCCcc-ccccChHHHHHhhhhhhHHH
Q psy7030         108 LLQAIN--SEFVEAVELLLEYEEIVHKEGEPYLSRKPPK-SCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       108 Lh~A~~--~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~-ac~~n~~~~l~~L~s~~~~~  164 (377)
                      ||.|+.  .++.+++++|+++|++++..+ ..|.||+|. ++..++.+++..|.++|++.
T Consensus       127 Lh~a~~~~~~~~~iv~~Li~~gadin~~d-~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi  185 (209)
T PHA02859        127 LHMYMCNFNVRINVIKLLIDSGVSFLNKD-FDNNNILYSYILFHSDKKIFDFLTSLGIDI  185 (209)
T ss_pred             HHHHHHhccCCHHHHHHHHHcCCCccccc-CCCCcHHHHHHHhcCCHHHHHHHHHcCCCC
Confidence            888775  357888888888888887653 678888885 34456677776666666543

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.60  E-value=4.1e-15  Score=149.75  Aligned_cols=118  Identities=25%  Similarity=0.272  Sum_probs=102.3

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc----------------
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP----------------  104 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i----------------  104 (377)
                      .+.++.|++.|+.++++.|++.     |+|+|..+..|.||||.|+..|+.+++++|+++|+++                
T Consensus        36 ~tpL~~A~~~g~~~iv~~Ll~~-----Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~l  110 (434)
T PHA02874         36 TTPLIDAIRSGDAKIVELFIKH-----GADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTI  110 (434)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHH
Confidence            4567889999999999999987     9999999999999999999999999999999887642                


Q ss_pred             -------C-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         105 -------K-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       105 -------~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                             +       ||||+|+..|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.++|.+.
T Consensus       111 l~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d-~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~  183 (434)
T PHA02874        111 LDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIED-DNGCYPIHIAIKHNFFDIIKLLLEKGAYA  183 (434)
T ss_pred             HHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcC-CCCCCHHHHHHHCCcHHHHHHHHHCCCCC
Confidence                   1       89999999999999999999999998654 78999999999999999887777665543

>PHA02946 ankyin-like protein; Provisional

Probab=99.60  E-value=3.7e-15  Score=150.44  Aligned_cols=109  Identities=18%  Similarity=0.278  Sum_probs=88.7

Q ss_pred             HcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC--CHHH
Q psy7030          49 ERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE--FVEA  119 (377)
Q Consensus        49 ~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g--~~ei  119 (377)
                      ..++.++++.||+.     |+|+|.+|.+|+||||+|++.|+.+++++|+++|++++       ||||+|+..+  ..++
T Consensus        48 ~~~~~~iv~~Ll~~-----Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~  122 (446)
T PHA02946         48 KGLDERFVEELLHR-----GYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIER  122 (446)
T ss_pred             cCCCHHHHHHHHHC-----cCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHH
Confidence            45577889999987     99999999999999999999999999999999998886       8999988765  4788


Q ss_pred             HHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         120 VELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       120 v~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      +++|+++|++++...+..|.|||| ||..++.+.+..|.++|++
T Consensus       123 v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad  165 (446)
T PHA02946        123 INLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFE  165 (446)
T ss_pred             HHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccc
Confidence            999999999988655578888887 5566777777666655544

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.58  E-value=3.6e-15  Score=151.67  Aligned_cols=120  Identities=23%  Similarity=0.271  Sum_probs=83.0

Q ss_pred             HHHHHHHHHcC--CHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------------
Q psy7030          41 EKKYLLSVERG--DTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------------  105 (377)
Q Consensus        41 e~~ll~Aa~~g--~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------------  105 (377)
                      ++.++.|+..|  +.++++.|++.     |+|+|.+|..|.||||+|+..|+.+++++|+++|++++             
T Consensus       142 ~t~L~~A~~~~~~~~~iv~~Ll~~-----g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~  216 (480)
T PHA03100        142 ENLLHLYLESNKIDLKILKLLIDK-----GVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFE  216 (480)
T ss_pred             CcHHHHHHHcCCChHHHHHHHHHC-----CCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHH
Confidence            34566677777  67777777765     77777777777777777777777777777777776653             


Q ss_pred             hHHHHHHhcCC--HHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         106 DALLQAINSEF--VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       106 tpLh~A~~~g~--~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      ||||.|+..|+  .+++++|+++|++++..+ ..|.||||.||..++.+++..|.++|++...
T Consensus       217 t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d-~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~  278 (480)
T PHA03100        217 TPLHIAACYNEITLEVVNYLLSYGVPINIKD-VYGFTPLHYAVYNNNPEFVKYLLDLGANPNL  278 (480)
T ss_pred             hHHHHHHHhCcCcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence            67777777777  777777777777776543 6677777777777777777666656654433

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.58  E-value=5.6e-15  Score=134.44  Aligned_cols=115  Identities=20%  Similarity=0.234  Sum_probs=99.0

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCcC--------hHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGE--NLEMTELLIVMGVEPK--------DALLQ  110 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g--~~~iv~~Ll~~ga~i~--------tpLh~  110 (377)
                      .+.++.|++.|+.+.|+.|++.        +|.+|..|.||||+|+.++  +.+++++|+++|++++        ||||+
T Consensus        22 ~~pL~~A~~~~~~~~vk~Li~~--------~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~   93 (209)
T PHA02859         22 CNPLFYYVEKDDIEGVKKWIKF--------VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHH   93 (209)
T ss_pred             CcHHHHHHHhCcHHHHHHHHHh--------hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHH
Confidence            4568889999999999999974        4668899999999999865  8999999999999885        99999


Q ss_pred             HHhc---CCHHHHHHHHhcCCccCCCCCCCCCCCCcccccc--ChHHHHHhhhhhhHHH
Q psy7030         111 AINS---EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQN--TAYRILLLLVSQRADV  164 (377)
Q Consensus       111 A~~~---g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~--n~~~~l~~L~s~~~~~  164 (377)
                      |+..   ++.+++++|+++|++++..+ ..|.||||.|+..  ++.+++..|.++|++.
T Consensus        94 a~~~~~~~~~eiv~~Ll~~gadin~~d-~~G~TpLh~a~~~~~~~~~iv~~Li~~gadi  151 (209)
T PHA02859         94 YLSFNKNVEPEILKILIDSGSSITEED-EDGKNLLHMYMCNFNVRINVIKLLIDSGVSF  151 (209)
T ss_pred             HHHhCccccHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence            8864   47999999999999999764 8999999998753  5788888888777664

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.58  E-value=1e-14  Score=146.82  Aligned_cols=104  Identities=14%  Similarity=0.191  Sum_probs=93.5

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+.
T Consensus       125 ~T~Lh~A~~~~~~~~v~~Ll~~-----gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~  199 (434)
T PHA02874        125 KTFLHYAIKKGDLESIKMLFEY-----GADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAE  199 (434)
T ss_pred             ccHHHHHHHCCCHHHHHHHHhC-----CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            4578889999999999999997     99999999999999999999999999999999998875       99999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccCh
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTA  150 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~  150 (377)
                      .|+.+++++|+++|++++... ..|.||||.|+..+.
T Consensus       200 ~g~~~iv~~Ll~~g~~i~~~~-~~g~TpL~~A~~~~~  235 (434)
T PHA02874        200 YGDYACIKLLIDHGNHIMNKC-KNGFTPLHNAIIHNR  235 (434)
T ss_pred             cCCHHHHHHHHhCCCCCcCCC-CCCCCHHHHHHHCCh
Confidence            999999999999999887543 567888888777553

>KOG0509|consensus

Probab=99.57  E-value=2.1e-15  Score=150.97  Aligned_cols=107  Identities=16%  Similarity=0.143  Sum_probs=82.7

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVD-PLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D-~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      ..++.||.+++.++++.|+++     |+|+|..+ .-|.||||+|+++||..+|++|+++|||++       +|+|.|++
T Consensus        80 tlLHWAAiNNrl~v~r~li~~-----gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~  154 (600)
T KOG0509|consen   80 TLLHWAAINNRLDVARYLISH-----GADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQ  154 (600)
T ss_pred             cceeHHHHcCcHHHHHHHHHc-----CCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHH
Confidence            447778888888998888887     88888877 678888888888888888888888888886       77777777


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHH
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l  154 (377)
                      .|+.-.+-+|+.++++++..+ +.|.||||+|+.++.-..+
T Consensus       155 ~~~~~~vayll~~~~d~d~~D-~~grTpLmwAaykg~~~~v  194 (600)
T KOG0509|consen  155 FGHTALVAYLLSKGADIDLRD-NNGRTPLMWAAYKGFALFV  194 (600)
T ss_pred             hCchHHHHHHHHhcccCCCcC-CCCCCHHHHHHHhcccHHH
Confidence            777777777777777776543 6666666666665444433

>PHA02917 ankyrin-like protein; Provisional

Probab=99.57  E-value=7.3e-15  Score=154.41  Aligned_cols=115  Identities=15%  Similarity=0.069  Sum_probs=99.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHH--HHcCCHHHHHHHHhCCCCcC---------------
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLA--IEGENLEMTELLIVMGVEPK---------------  105 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A--~~~g~~~iv~~Ll~~ga~i~---------------  105 (377)
                      ..+.|+.+|+.++++.||+.     |+|+|.+|.+|+||||.|  +.+|+.+++++|+++|++++               
T Consensus       106 ~~~~a~~~~~~e~vk~Ll~~-----Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~  180 (661)
T PHA02917        106 FSYMKSKNVDVDLIKVLVEH-----GFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDY  180 (661)
T ss_pred             HHHHHhhcCCHHHHHHHHHc-----CCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccc
Confidence            34568899999999999997     999999999999999964  45789999999999999873               


Q ss_pred             ------hHHHHHHh-----------cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChH--HHHHhhhhhhHHH
Q psy7030         106 ------DALLQAIN-----------SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAY--RILLLLVSQRADV  164 (377)
Q Consensus       106 ------tpLh~A~~-----------~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~--~~l~~L~s~~~~~  164 (377)
                            ||||+|+.           .++.+++++|+++|+++|..+ ..|.||||+|+..++.  +++..|. +|++.
T Consensus       181 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d-~~G~TpLh~A~~~g~~~~eivk~Li-~g~d~  256 (661)
T PHA02917        181 QPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSID-KNYCTALQYYIKSSHIDIDIVKLLM-KGIDN  256 (661)
T ss_pred             cccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCC-CCCCcHHHHHHHcCCCcHHHHHHHH-hCCcc
Confidence                  99999986           568999999999999999764 8999999999998875  6776665 35543

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.56  E-value=8.8e-15  Score=148.80  Aligned_cols=110  Identities=15%  Similarity=0.186  Sum_probs=67.2

Q ss_pred             HHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHH--HcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC--
Q psy7030          47 SVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAI--EGENLEMTELLIVMGVEPK-------DALLQAINSE--  115 (377)
Q Consensus        47 Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~--~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g--  115 (377)
                      |+..|+.++++.|++.     |+++|.+|..|.||||+|+  ..|+.+++++|+++|++++       ||||+|+..|  
T Consensus        80 a~~~~~~~iv~~Ll~~-----ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~  154 (480)
T PHA03100         80 YNLTDVKEIVKLLLEY-----GANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKI  154 (480)
T ss_pred             HHhhchHHHHHHHHHC-----CCCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCC
Confidence            6666666666666665     6666666666666666666  6666666666666666553       6666666666  


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      +.+++++|+++|++++..+ ..|.||||.|+..++.+++..|.++|+
T Consensus       155 ~~~iv~~Ll~~g~din~~d-~~g~tpL~~A~~~~~~~iv~~Ll~~ga  200 (480)
T PHA03100        155 DLKILKLLIDKGVDINAKN-RYGYTPLHIAVEKGNIDVIKFLLDNGA  200 (480)
T ss_pred             hHHHHHHHHHCCCCccccc-CCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence            6666666666666665443 356666666666666666655554443

>KOG4214|consensus

Probab=99.55  E-value=1.1e-14  Score=111.91  Aligned_cols=94  Identities=22%  Similarity=0.305  Sum_probs=84.4

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      ..+..++++|..+.|+....+     |.|+|..- .||+|||+|+..|+.++.++|+..|++++       |||..|+..
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~-----g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwE   77 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNE-----GLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWE   77 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHc-----cccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHH
Confidence            567889999999999999987     99999765 89999999999999999999999999997       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCC
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKP  142 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~l  142 (377)
                      ||.++|++|++.|++..... +.|.+.+
T Consensus        78 GH~~cVklLL~~GAdrt~~~-PdG~~~~  104 (117)
T KOG4214|consen   78 GHRDCVKLLLQNGADRTIHA-PDGTALI  104 (117)
T ss_pred             hhHHHHHHHHHcCcccceeC-CCchhHH
Confidence            99999999999999886543 6665443

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.54  E-value=6.2e-15  Score=127.39  Aligned_cols=120  Identities=12%  Similarity=0.102  Sum_probs=94.3

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhc--cCCCCcccccCCCCCcHHHHHHHcCCH---HHHHHHHhCCCCcC--------hH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAY--RNHHIDINCVDPLGRSALTLAIEGENL---EMTELLIVMGVEPK--------DA  107 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~--~~~g~dvn~~D~~G~TpLh~A~~~g~~---~iv~~Ll~~ga~i~--------tp  107 (377)
                      ++.|+.||+.|+..  +.+.....  ...+..++.+|.+|+||||+|+..|+.   +++++|+++|++++        ||
T Consensus        18 ~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~   95 (154)
T PHA02736         18 ENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTP   95 (154)
T ss_pred             CCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcH
Confidence            45688899999843  23222210  001223456799999999999999987   46889999998875        99


Q ss_pred             HHHHHhcCCHHHHHHHHh-cCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         108 LLQAINSEFVEAVELLLE-YEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       108 Lh~A~~~g~~eiv~~Ll~-~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      ||+|+..|+.+++++|++ .|++++.. +..|.||||+|+..++.+++..|.+++++
T Consensus        96 Lh~A~~~~~~~i~~~Ll~~~g~d~n~~-~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~  151 (154)
T PHA02736         96 LHIAVYTQNYELATWLCNQPGVNMEIL-NYAFKTPYYVACERHDAKMMNILRAKGAQ  151 (154)
T ss_pred             HHHHHHhCCHHHHHHHHhCCCCCCccc-cCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            999999999999999998 48888865 38999999999999999999777766654

>PHA03095 ankyrin-like protein; Provisional

Probab=99.54  E-value=1.7e-14  Score=146.34  Aligned_cols=113  Identities=19%  Similarity=0.240  Sum_probs=80.4

Q ss_pred             HHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcC---CHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          45 LLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGE---NLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        45 l~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g---~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++..++.++++.|++.     |+|+|.+|..|+||||+|+..+   +.++++.|+++|++++       ||||+|+..
T Consensus        19 ~~~~~~~~~~~v~~Ll~~-----ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~   93 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAA-----GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYN   93 (471)
T ss_pred             HHcCCCCCHHHHHHHHHc-----CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence            456677777777777776     7777777777777777777777   7777777777777775       777777777


Q ss_pred             C-CHHHHHHHHhcCCccCCCCCCCCCCCCcccc--ccChHHHHHhhhhhhHH
Q psy7030         115 E-FVEAVELLLEYEEIVHKEGEPYLSRKPPKSC--QNTAYRILLLLVSQRAD  163 (377)
Q Consensus       115 g-~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac--~~n~~~~l~~L~s~~~~  163 (377)
                      | +.+++++|+++|++++..+ ..|.||||.||  ..++.+++..|.++|++
T Consensus        94 ~~~~~iv~lLl~~ga~in~~~-~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad  144 (471)
T PHA03095         94 ATTLDVIKLLIKAGADVNAKD-KVGRTPLHVYLSGFNINPKVIRLLLRKGAD  144 (471)
T ss_pred             CCcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHhhCCcCCHHHHHHHHHcCCC
Confidence            7 4777777777777777643 56777777777  33456666555544443

>PHA02946 ankyin-like protein; Provisional

Probab=99.54  E-value=1.5e-14  Score=146.02  Aligned_cols=118  Identities=10%  Similarity=0.083  Sum_probs=92.4

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCC--HHHHHHHHhCCCCcC--------hHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN--LEMTELLIVMGVEPK--------DALLQ  110 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~--~~iv~~Ll~~ga~i~--------tpLh~  110 (377)
                      .+.|+.||+.|+.++++.||+.     |+|+|.+|++|+||||+|+..++  .+++++|+++|++++        |||| 
T Consensus        73 ~TpLh~Aa~~g~~eiv~lLL~~-----GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-  146 (446)
T PHA02946         73 NYPLHIASKINNNRIVAMLLTH-----GADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-  146 (446)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHC-----cCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-
Confidence            4568889999999999999997     99999999999999999988764  789999999998875        7886 


Q ss_pred             HHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccCh--HHHHHhhhhhhHHHH
Q psy7030         111 AINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTA--YRILLLLVSQRADVI  165 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~--~~~l~~L~s~~~~~~  165 (377)
                      |+..|+.+++++|+++|++++..+ ..|+||||.|+..++  .+.+..|.++|++..
T Consensus       147 aa~~~~~~vv~~Ll~~gad~~~~d-~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin  202 (446)
T PHA02946        147 ACTDPSERVFKKIMSIGFEARIVD-KFGKNHIHRHLMSDNPKASTISWMMKLGISPS  202 (446)
T ss_pred             HHHCCChHHHHHHHhccccccccC-CCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCc
Confidence            666678888888888888777543 667777777655433  345555555554443

>KOG3599|consensus

Probab=99.53  E-value=6.3e-14  Score=148.00  Aligned_cols=174  Identities=21%  Similarity=0.319  Sum_probs=139.9

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhcc--c
Q psy7030         183 GLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIE----ANES--S  256 (377)
Q Consensus       183 ~~~~~~~e~~~~~~~~~~~~~Ei~~~~~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~----~~~~--~  256 (377)
                      ....-.+|++++++++++++.|+.++++++.+.|+++.||++|+.++.+.++++++.+.+..-..+.+.    +++.  .
T Consensus       462 ~~~~~l~~vvf~l~~~yf~~~e~~~i~~~~~~~y~~s~wN~ld~~i~~ls~~~~~~~~~r~~l~~~~l~~~~~~~~~~f~  541 (798)
T KOG3599|consen  462 SSLIMLCEVVFLLFVLYFAVAEGLKIWIHRLGRYVRSKWNWLDLAIVLLSVVLLVLMITRTGLADGVLTGFERASPRTFI  541 (798)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence            345567889999999999999999999888889999999999999999999999888877532222221    2222  1


Q ss_pred             ccccccccccCChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy7030         257 KFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWY  336 (377)
Q Consensus       257 ~~~~~~~w~~~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~~  336 (377)
                      ++....+|+     ..++.+.|+.+++.|+|+.+++++|++++.+..||.++.+|++.|.++++|+++||+...+.+|+.
T Consensus       542 ~F~~~a~~~-----~~~~~l~a~lvfl~tiK~~k~l~f~~t~~~~s~TL~ra~~~I~gf~l~~~I~~~aya~l~~llfG~  616 (798)
T KOG3599|consen  542 DFTEVAQWN-----IAARNLLAFLVFLTTIKLWKVLRFNKTMSQFSSTLSRAWKEIVGFALMFLILFFAYAQLGYLLFGN  616 (798)
T ss_pred             CHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            223333343     467889999999999999999999999999999999999999999999999999999999999996


Q ss_pred             ----ccccccccccccccCCCCCCCCCCC
Q psy7030         337 ----FTELERKDCYSTMSSTGALNPSEDP  361 (377)
Q Consensus       337 ----y~~~~~~~~~~~~~~~~~~~~~~~~  361 (377)
                          |.+..++.-+......|.++|++.-
T Consensus       617 ~v~~f~~f~~s~~t~~~~~~G~~~~~~i~  645 (798)
T KOG3599|consen  617 QVSDFRTFVASIVTLLRYILGDFCPAEIF  645 (798)
T ss_pred             ccCChHHHHHHHHHHHHHHhccCCccccc
Confidence                6666665555555566667776653

>PHA02795 ankyrin-like protein; Provisional

Probab=99.52  E-value=3.1e-14  Score=141.08  Aligned_cols=71  Identities=20%  Similarity=0.067  Sum_probs=37.5

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccC
Q psy7030          78 GRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNT  149 (377)
Q Consensus        78 G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n  149 (377)
                      |.||+|.|+++++.+++++|+++|++++       ||||+|+..|+.+++++|+++|++++..+ ..|.||||.|+..|
T Consensus       188 ~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d-~~G~TpLh~Aa~~g  265 (437)
T PHA02795        188 QYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVM-SNGYTCLDVAVDRG  265 (437)
T ss_pred             ccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHcC
Confidence            3344444444444444444444444443       56666666666666666666666655443 45566666665554

>PHA02795 ankyrin-like protein; Provisional

Probab=99.52  E-value=3e-14  Score=141.19  Aligned_cols=119  Identities=12%  Similarity=0.056  Sum_probs=105.1

Q ss_pred             hHHHHHHHHH--cCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC------------
Q psy7030          40 EEKKYLLSVE--RGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK------------  105 (377)
Q Consensus        40 ~e~~ll~Aa~--~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~------------  105 (377)
                      ....|+.|+.  .|+.++++.||+.     |+|+|.++  +.||||.|+.+|+.+++++|+++|++..            
T Consensus       116 ~~~~L~~~~~n~~n~~eiV~~LI~~-----GADIn~~~--~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~  188 (437)
T PHA02795        116 VQDLLLYYLSNAYVEIDIVDFMVDH-----GAVIYKIE--CLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQ  188 (437)
T ss_pred             ccHHHHHHHHhcCCCHHHHHHHHHC-----CCCCCCCC--CCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhc
Confidence            3556777888  8999999999997     99999854  5899999999999999999999997431            


Q ss_pred             -hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         106 -DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       106 -tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                       ||+|.|+..++.|++++|+++|+++|..+ ..|.||||+|+..|+.+++..|.++|++...
T Consensus       189 ~t~l~~a~~~~~~eIve~LIs~GADIN~kD-~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~  249 (437)
T PHA02795        189 YTRGFLVDEPTVLEIYKLCIPYIEDINQLD-AGGRTLLYRAIYAGYIDLVSWLLENGANVNA  249 (437)
T ss_pred             cchhHHHHhcCHHHHHHHHHhCcCCcCcCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence             68889999999999999999999999764 8999999999999999999888888877655

>KOG0510|consensus

Probab=99.51  E-value=4.4e-14  Score=144.39  Aligned_cols=123  Identities=21%  Similarity=0.223  Sum_probs=104.9

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCc------------ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC---
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHID------------INCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK---  105 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~d------------vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~---  105 (377)
                      .++++.|++.||.++++.+|+...  ++++            +|..|.+|.||||+||+.|+.+.++.|+..|++++   
T Consensus       226 ~~pLhlAve~g~~e~lk~~L~n~~--~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn  303 (929)
T KOG0510|consen  226 ATPLHLAVEGGDIEMLKMCLQNGK--KIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKN  303 (929)
T ss_pred             CcchhhhhhcCCHHHHHHHHhCcc--ccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccC
Confidence            345777999999999999999621  1111            34678999999999999999999999999999997   


Q ss_pred             ----hHHHHHHhcCCHHHHHHHHh-cCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHH
Q psy7030         106 ----DALLQAINSEFVEAVELLLE-YEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVI  165 (377)
Q Consensus       106 ----tpLh~A~~~g~~eiv~~Ll~-~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~  165 (377)
                          ||||.|+..|+.++++-||+ .|-.....+|..|.||||.|+.+|.++++.+|...|+...
T Consensus       304 ~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~  368 (929)
T KOG0510|consen  304 KDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFL  368 (929)
T ss_pred             CCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhh
Confidence                99999999999999999999 5555555667899999999999999999988887777665

>PHA03095 ankyrin-like protein; Provisional

Probab=99.51  E-value=4.2e-14  Score=143.39  Aligned_cols=117  Identities=21%  Similarity=0.206  Sum_probs=101.3

Q ss_pred             HHHHHHHHHcC---CHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCcC-------hHHH
Q psy7030          41 EKKYLLSVERG---DTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGE-NLEMTELLIVMGVEPK-------DALL  109 (377)
Q Consensus        41 e~~ll~Aa~~g---~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g-~~~iv~~Ll~~ga~i~-------tpLh  109 (377)
                      .+.++.|+..|   +.++++.|++.     |+|+|.+|..|+||||+|+..| +.+++++|+++|++++       ||||
T Consensus        48 ~t~Lh~a~~~~~~~~~~iv~~Ll~~-----Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh  122 (471)
T PHA03095         48 KTPLHLYLHYSSEKVKDIVRLLLEA-----GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLH  122 (471)
T ss_pred             CCHHHHHHHhcCCChHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence            34577799988   99999999997     9999999999999999999999 5999999999999886       9999


Q ss_pred             HHH--hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccC--hHHHHHhhhhhhHH
Q psy7030         110 QAI--NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNT--AYRILLLLVSQRAD  163 (377)
Q Consensus       110 ~A~--~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n--~~~~l~~L~s~~~~  163 (377)
                      +|+  ..++.+++++|+++|++++..+ ..|.||||.++..+  +.+.+..|.++|.+
T Consensus       123 ~a~~~~~~~~~iv~~Ll~~gad~~~~d-~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~  179 (471)
T PHA03095        123 VYLSGFNINPKVIRLLLRKGADVNALD-LYGMTPLAVLLKSRNANVELLRLLIDAGAD  179 (471)
T ss_pred             HHhhCCcCCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHcCCCCHHHHHHHHHcCCC
Confidence            999  5678999999999999998754 78999999987764  56777666655544

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.50  E-value=4.7e-14  Score=144.42  Aligned_cols=106  Identities=18%  Similarity=0.198  Sum_probs=61.7

Q ss_pred             cCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCc-C-------hHHHHHHhc--CC
Q psy7030          50 RGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEG---ENLEMTELLIVMGVEP-K-------DALLQAINS--EF  116 (377)
Q Consensus        50 ~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~---g~~~iv~~Ll~~ga~i-~-------tpLh~A~~~--g~  116 (377)
                      .|+.++++.||+.     |+|+|.+|..|+||||.|+.+   |+.+++++|+++|+++ +       ||||+|+..  ++
T Consensus        85 ~~~~~iv~~Ll~~-----Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~  159 (494)
T PHA02989         85 NKIKKIVKLLLKF-----GADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVK  159 (494)
T ss_pred             hhHHHHHHHHHHC-----CCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCC
Confidence            4556666666665     666666666666666655543   4566666666666666 2       666666543  45


Q ss_pred             HHHHHHHHhcCCccCCCCCCCCCCCCcccccc----ChHHHHHhhhhh
Q psy7030         117 VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQN----TAYRILLLLVSQ  160 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~----n~~~~l~~L~s~  160 (377)
                      .+++++|+++|++++...+..|.||+|.|+..    ++.+++..|.++
T Consensus       160 ~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~  207 (494)
T PHA02989        160 KDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK  207 (494)
T ss_pred             HHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhC
Confidence            66666666666666553345566666655433    245555444433

>PHA02798 ankyrin-like protein; Provisional

Probab=99.50  E-value=3.8e-14  Score=144.93  Aligned_cols=111  Identities=16%  Similarity=0.153  Sum_probs=74.0

Q ss_pred             HcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHc-----CCHHHHHHHHhCCCCcC-------hHHHHHHhcC-
Q psy7030          49 ERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEG-----ENLEMTELLIVMGVEPK-------DALLQAINSE-  115 (377)
Q Consensus        49 ~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~-----g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g-  115 (377)
                      ..++.++++.|++.     |+|+|.+|..|.||||.|+.+     ++.+++++|+++|++++       ||||+|+..+ 
T Consensus        47 ~~~~~~iv~~Ll~~-----Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~  121 (489)
T PHA02798         47 DSPSTDIVKLFINL-----GANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGY  121 (489)
T ss_pred             CCCCHHHHHHHHHC-----CCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCC
Confidence            34466777777765     777777777777777776654     55677777777777665       7777777654 


Q ss_pred             --CHHHHHHHHhcCCccCCCCCCCCCCCCccccccCh---HHHHHhhhhhhHHHH
Q psy7030         116 --FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTA---YRILLLLVSQRADVI  165 (377)
Q Consensus       116 --~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~---~~~l~~L~s~~~~~~  165 (377)
                        +.+++++|+++|++++..+ ..|.||||.|+..++   .+.+..|.++|++..
T Consensus       122 ~~~~~iv~~Ll~~Gadvn~~d-~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin  175 (489)
T PHA02798        122 INNLEILLFMIENGADTTLLD-KDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDIN  175 (489)
T ss_pred             cChHHHHHHHHHcCCCccccC-CCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcc
Confidence              5677777777777776543 667777777766655   666655555555543

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.50  E-value=5.1e-14  Score=148.23  Aligned_cols=118  Identities=12%  Similarity=0.019  Sum_probs=90.4

Q ss_pred             HHHHHHH--cCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCC--HHHHHHHHhCCCCcC-------hHHHHH
Q psy7030          43 KYLLSVE--RGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN--LEMTELLIVMGVEPK-------DALLQA  111 (377)
Q Consensus        43 ~ll~Aa~--~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~--~~iv~~Ll~~ga~i~-------tpLh~A  111 (377)
                      .++.|+.  .|+.++++.|++.     |+|+|.+|..|+||||+|++.|+  .+++++|+++|++++       ||||.|
T Consensus       180 pLH~A~~n~~~~~eIVklLLe~-----GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~A  254 (764)
T PHA02716        180 ILHAYLGNMYVDIDILEWLCNN-----GVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTY  254 (764)
T ss_pred             HHHHHHHhccCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence            4454543  4678888888886     89999999999999999998885  488999999998886       888865


Q ss_pred             -------------------------------------HhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccc--cChHH
Q psy7030         112 -------------------------------------INSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQ--NTAYR  152 (377)
Q Consensus       112 -------------------------------------~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~--~n~~~  152 (377)
                                                           +..|+.++++.|+++|++++.++ ..|+||||.|+.  .++.+
T Consensus       255 i~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD-~~G~TPLH~Aaa~~~~~~e  333 (764)
T PHA02716        255 IINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKD-SAGRTCLHQYILRHNISTD  333 (764)
T ss_pred             HHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccC-CCCCCHHHHHHHHhCCCch
Confidence                                                 34577888888888888888653 788899998764  34667


Q ss_pred             HHHhhhhhhHHHHH
Q psy7030         153 ILLLLVSQRADVIL  166 (377)
Q Consensus       153 ~l~~L~s~~~~~~l  166 (377)
                      ++.+|.++|++...
T Consensus       334 IVklLLe~GADIN~  347 (764)
T PHA02716        334 IIKLLHEYGNDLNE  347 (764)
T ss_pred             HHHHHHHcCCCCcc
Confidence            77777767666544

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.49  E-value=6.7e-14  Score=143.28  Aligned_cols=110  Identities=13%  Similarity=0.120  Sum_probs=93.5

Q ss_pred             CCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcC------CHHHHHHHHhCCCCcC-------hHHHHHHhc---
Q psy7030          51 GDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGE------NLEMTELLIVMGVEPK-------DALLQAINS---  114 (377)
Q Consensus        51 g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g------~~~iv~~Ll~~ga~i~-------tpLh~A~~~---  114 (377)
                      |+.++++.||+.     |+|+|.++ .|.||||.|+.++      +.+++++|+++|++++       ||||.|+..   
T Consensus        48 ~~~~iv~~Ll~~-----GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~  121 (494)
T PHA02989         48 VKIKIVKLLIDN-----GADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNI  121 (494)
T ss_pred             CChHHHHHHHHc-----CCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhccc
Confidence            478999999997     99999987 5799999998764      5789999999999986       999988765   


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCcccccc--ChHHHHHhhhhhhHHHHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQN--TAYRILLLLVSQRADVIL  166 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~--n~~~~l~~L~s~~~~~~l  166 (377)
                      |+.+++++|+++|++++...+..|.||||+|+..  ++.+++..|.++|++...
T Consensus       122 ~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~  175 (494)
T PHA02989        122 NNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFE  175 (494)
T ss_pred             CcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc
Confidence            6899999999999999433458899999998754  578888888888877654

>PHA02798 ankyrin-like protein; Provisional

Probab=99.49  E-value=4.5e-14  Score=144.36  Aligned_cols=120  Identities=19%  Similarity=0.159  Sum_probs=102.4

Q ss_pred             hHHHHHHHHHc-----CCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcC---CHHHHHHHHhCCCCcC------
Q psy7030          40 EEKKYLLSVER-----GDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGE---NLEMTELLIVMGVEPK------  105 (377)
Q Consensus        40 ~e~~ll~Aa~~-----g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g---~~~iv~~Ll~~ga~i~------  105 (377)
                      .+++++.|+.+     ++.++++.|++.     |+|+|.+|..|+||||+|+.++   +.+++++|+++|++++      
T Consensus        71 g~TpL~~~~~n~~~~~~~~~iv~~Ll~~-----GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g  145 (489)
T PHA02798         71 YSTPLCTILSNIKDYKHMLDIVKILIEN-----GADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDG  145 (489)
T ss_pred             CCChHHHHHHhHHhHHhHHHHHHHHHHC-----CCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCC
Confidence            35667777754     678999999997     9999999999999999999986   7899999999999986      


Q ss_pred             -hHHHHHHhcCC---HHHHHHHHhcCCccCCCCCCCCCCCCccccccCh----HHHHHhhhhhhHHH
Q psy7030         106 -DALLQAINSEF---VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTA----YRILLLLVSQRADV  164 (377)
Q Consensus       106 -tpLh~A~~~g~---~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~----~~~l~~L~s~~~~~  164 (377)
                       ||||+|++.|+   .+++++|+++|++++..++..|.||+|.+...+.    .+++..|.++|++.
T Consensus       146 ~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i  212 (489)
T PHA02798        146 FTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFII  212 (489)
T ss_pred             CcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCc
Confidence             99999999998   9999999999999998766789999999877542    34456666676654

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.48  E-value=8.5e-14  Score=147.91  Aligned_cols=118  Identities=17%  Similarity=0.198  Sum_probs=85.3

Q ss_pred             HHHHHHHcC-CHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          43 KYLLSVERG-DTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        43 ~ll~Aa~~g-~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      .++.|+..| +.++++.|++.     |+|+|.+|..|+||||+|+..|+.++++.|+++|++++       ||||+|+..
T Consensus       344 pLh~A~~~~~~~~iv~lLl~~-----gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~  418 (682)
T PHA02876        344 PLHQASTLDRNKDIVITLLEL-----GANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCG  418 (682)
T ss_pred             HHHHHHHhCCcHHHHHHHHHc-----CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHc
Confidence            455565543 45566666665     78888888888888888888888888888888887775       788888765


Q ss_pred             CC-HHHHHHHHhcCCccCCCCCCCCCCCCccccccC-hHHHHHhhhhhhHHHHH
Q psy7030         115 EF-VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNT-AYRILLLLVSQRADVIL  166 (377)
Q Consensus       115 g~-~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n-~~~~l~~L~s~~~~~~l  166 (377)
                      ++ .+++++|+++|+++|..+ ..|+||||+||..+ ..+++..|.++|++.+.
T Consensus       419 ~~~~~~vk~Ll~~gadin~~d-~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~  471 (682)
T PHA02876        419 TNPYMSVKTLIDRGANVNSKN-KDLSTPLHYACKKNCKLDVIEMLLDNGADVNA  471 (682)
T ss_pred             CCHHHHHHHHHhCCCCCCcCC-CCCChHHHHHHHhCCcHHHHHHHHHCCCCCCC
Confidence            55 456788888888887654 67888888888765 56777667666665544

>KOG0195|consensus

Probab=99.47  E-value=1.3e-14  Score=132.72  Aligned_cols=117  Identities=21%  Similarity=0.156  Sum_probs=79.8

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      ++.=|+.|+.-.|+.-|+.    ..-|.|.-|..|-+|||+||+.||..+++.|+..|+.+|       ||||+|+..||
T Consensus         4 if~wcregna~qvrlwld~----tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahgh   79 (448)
T KOG0195|consen    4 IFGWCREGNAFQVRLWLDD----TEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGH   79 (448)
T ss_pred             hhhhhhcCCeEEEEEEecC----cccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhccc
Confidence            3445566666566666654    245666777777777777777777777777777777765       77777777777


Q ss_pred             HHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHH
Q psy7030         117 VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVI  165 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~  165 (377)
                      .++|+.|++..+|+|... +.|+||||+||--+.-.+...|.+.|+.+.
T Consensus        80 rdivqkll~~kadvnavn-ehgntplhyacfwgydqiaedli~~ga~v~  127 (448)
T KOG0195|consen   80 RDIVQKLLSRKADVNAVN-EHGNTPLHYACFWGYDQIAEDLISCGAAVN  127 (448)
T ss_pred             HHHHHHHHHHhcccchhh-ccCCCchhhhhhhcHHHHHHHHHhccceee
Confidence            777777777777777653 777777777777664444455554444433

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.47  E-value=2.3e-13  Score=144.68  Aligned_cols=115  Identities=15%  Similarity=0.211  Sum_probs=96.2

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.+..|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||.|+.
T Consensus       146 ~~~l~~~i~~~~~~i~k~Ll~~-----Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~  220 (682)
T PHA02876        146 MKLIKERIQQDELLIAEMLLEG-----GADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVD  220 (682)
T ss_pred             hHHHHHHHHCCcHHHHHHHHhC-----CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHH
Confidence            4557788999999999999997     99999999999999999999999999999999999886       89999999


Q ss_pred             cCCHHHHHHHHhcCCc-----------------------------cCCCCCCCCCCCCccccccChHH-HHHhhhhhh
Q psy7030         114 SEFVEAVELLLEYEEI-----------------------------VHKEGEPYLSRKPPKSCQNTAYR-ILLLLVSQR  161 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~-----------------------------~~~~~~~~~~t~lh~ac~~n~~~-~l~~L~s~~  161 (377)
                      .|+.++++.|++.+++                             ++.. +..|.||||.||..++.+ .+..|..+|
T Consensus       221 ~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~-d~~g~TpLh~Aa~~~~~~~iv~lLl~~g  297 (682)
T PHA02876        221 SKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSI-DDCKNTPLHHASQAPSLSRLVPKLLERG  297 (682)
T ss_pred             cCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHhCCCHHHHHHHHHHCC
Confidence            9998888877765544                             4332 357999999999988765 444444343

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.47  E-value=2.3e-13  Score=143.35  Aligned_cols=113  Identities=16%  Similarity=0.215  Sum_probs=95.1

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCcC-------hHHHHHHh-
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIE--GENLEMTELLIVMGVEPK-------DALLQAIN-  113 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~--~g~~~iv~~Ll~~ga~i~-------tpLh~A~~-  113 (377)
                      ++.|++.|+.++++.||+.     |+++|.+|..|+||||+|+.  .++.+++++|+++|++++       ||||.|+. 
T Consensus       288 ~i~AA~~g~leiVklLLe~-----GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~  362 (764)
T PHA02716        288 YITLARNIDISVVYSFLQP-----GVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSM  362 (764)
T ss_pred             HHHHHHcCCHHHHHHHHhC-----CCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHh
Confidence            4568999999999999997     99999999999999999864  468999999999999986       99999875 


Q ss_pred             -------------cCCHHHHHHHHhcCCccCCCCCCCCCCCCcc-ccc---cChHHHHHhhhhhhH
Q psy7030         114 -------------SEFVEAVELLLEYEEIVHKEGEPYLSRKPPK-SCQ---NTAYRILLLLVSQRA  162 (377)
Q Consensus       114 -------------~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~-ac~---~n~~~~l~~L~s~~~  162 (377)
                                   .++.+++++|+++|++++..+ ..|+||||. +|.   .+..+++.+|.+.++
T Consensus       363 lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn-~~G~TPLh~y~~~a~n~~~~dIvklLis~~~  427 (764)
T PHA02716        363 LSVVNILDPETDNDIRLDVIQCLISLGADITAVN-CLGYTPLTSYICTAQNYMYYDIIDCLISDKV  427 (764)
T ss_pred             hhhhccccccccccChHHHHHHHHHCCCCCCCcC-CCCCChHHHHHHHHHhcChHHHHHHHHhCcc
Confidence                         378999999999999999764 889999993 333   345677766666543

>KOG0502|consensus

Probab=99.44  E-value=2.5e-13  Score=120.17  Aligned_cols=112  Identities=22%  Similarity=0.234  Sum_probs=96.6

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      ...++.+.+.+.+..+.+       ..+|..|+.|-|||++|+.+||.++|++|++.|+|++       ++|.+|+..|.
T Consensus       133 ~slsVhql~L~~~~~~~~-------n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggy  205 (296)
T KOG0502|consen  133 LSLSVHQLHLDVVDLLVN-------NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGY  205 (296)
T ss_pred             hhHHHHHHHHHHHHHHhh-------ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCCh
Confidence            345666666666555443       4689999999999999999999999999999999997       99999999999


Q ss_pred             HHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         117 VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      .++|++|+..+.++|..+ -.|-|||-+|...|..+++..|...|++
T Consensus       206 tdiV~lLL~r~vdVNvyD-wNGgTpLlyAvrgnhvkcve~Ll~sGAd  251 (296)
T KOG0502|consen  206 TDIVELLLTREVDVNVYD-WNGGTPLLYAVRGNHVKCVESLLNSGAD  251 (296)
T ss_pred             HHHHHHHHhcCCCcceec-cCCCceeeeeecCChHHHHHHHHhcCCC
Confidence            999999999999999764 7888999999999999999777755554

>KOG0502|consensus

Probab=99.43  E-value=2e-13  Score=120.74  Aligned_cols=106  Identities=25%  Similarity=0.291  Sum_probs=96.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+.+|+++.|+.||+.     |+|++..-++..|+|.+|+..|..++|++|++.+.|+|       |||.+|++.
T Consensus       162 TpLiWAaa~G~i~vV~fLL~~-----GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrg  236 (296)
T KOG0502|consen  162 TPLIWAAAKGHIPVVQFLLNS-----GADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRG  236 (296)
T ss_pred             hHhHHHHhcCchHHHHHHHHc-----CCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecC
Confidence            358899999999999999998     99999999999999999999999999999999999987       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l  154 (377)
                      ||.+|++.|+..|++++..+ ..|.+++-.|...+ |+.+
T Consensus       237 nhvkcve~Ll~sGAd~t~e~-dsGy~~mdlAValG-yr~V  274 (296)
T KOG0502|consen  237 NHVKCVESLLNSGADVTQED-DSGYWIMDLAVALG-YRIV  274 (296)
T ss_pred             ChHHHHHHHHhcCCCccccc-ccCCcHHHHHHHhh-hHHH
Confidence            99999999999999998754 78888888877765 5555

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.42  E-value=9.2e-13  Score=115.54  Aligned_cols=89  Identities=18%  Similarity=0.163  Sum_probs=79.4

Q ss_pred             HHHHHHHHHcCCHHH---HHHHHHhhccCCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHh-CCCCcC-------hHH
Q psy7030          41 EKKYLLSVERGDTAT---VRKCIKRAYRNHHIDINCVD-PLGRSALTLAIEGENLEMTELLIV-MGVEPK-------DAL  108 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~---v~~LL~~~~~~~g~dvn~~D-~~G~TpLh~A~~~g~~~iv~~Ll~-~ga~i~-------tpL  108 (377)
                      .+.++.|+..|+.+.   ++.|++.     |+++|.+| ..|+||||+|+..|+.+++++|++ .|++++       |||
T Consensus        58 ~t~Lh~Aa~~g~~~~~~~i~~Ll~~-----Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL  132 (166)
T PHA02743         58 RQCTHMVAWYDRANAVMKIELLVNM-----GADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAY  132 (166)
T ss_pred             CcHHHHHHHhCccCHHHHHHHHHHc-----CCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHH
Confidence            346788999988654   7888887     99999998 589999999999999999999995 798875       999


Q ss_pred             HHHHhcCCHHHHHHHHhcCCccCCCC
Q psy7030         109 LQAINSEFVEAVELLLEYEEIVHKEG  134 (377)
Q Consensus       109 h~A~~~g~~eiv~~Ll~~~~~~~~~~  134 (377)
                      |+|+..++.+++++|+++|++++...
T Consensus       133 ~~A~~~~~~~iv~~Ll~~ga~~~~~~  158 (166)
T PHA02743        133 HIAYKMRDRRMMEILRANGAVCDDPL  158 (166)
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcc
Confidence            99999999999999999999998653

>PHA02730 ankyrin-like protein; Provisional

Probab=99.40  E-value=8.9e-13  Score=136.67  Aligned_cols=119  Identities=15%  Similarity=0.099  Sum_probs=102.6

Q ss_pred             HHHHHHHHHcC---CHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCc--C-------h
Q psy7030          41 EKKYLLSVERG---DTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGE--NLEMTELLIVMGVEP--K-------D  106 (377)
Q Consensus        41 e~~ll~Aa~~g---~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g--~~~iv~~Ll~~ga~i--~-------t  106 (377)
                      ++.|+.|+..|   +.++++.||+.     |+|+|++|..|+||||+|+..+  +.|++++|+++|++.  +       +
T Consensus        42 ~TaLh~A~~~~~~~~~eivklLLs~-----GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~  116 (672)
T PHA02730         42 NNALHCYVSNKCDTDIKIVRLLLSR-----GVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDF  116 (672)
T ss_pred             CcHHHHHHHcCCcCcHHHHHHHHhC-----CCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCc
Confidence            46788899997   59999999987     9999999999999999999977  799999999997644  2       8


Q ss_pred             HHHHHHh--cCCHHHHHHHHh-cCCccCCCCC----CCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         107 ALLQAIN--SEFVEAVELLLE-YEEIVHKEGE----PYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       107 pLh~A~~--~g~~eiv~~Ll~-~~~~~~~~~~----~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      |||.++.  +++.+++++|++ .+.+++...+    ..|.+|++.+..++..+++.+|..+|+++
T Consensus       117 ~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v  181 (672)
T PHA02730        117 DLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYS  181 (672)
T ss_pred             hHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcc
Confidence            9999998  999999999997 6677765422    37889999999999999998888888776

>KOG0195|consensus

Probab=99.40  E-value=5e-13  Score=122.45  Aligned_cols=96  Identities=16%  Similarity=0.097  Sum_probs=89.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .++.||+.|+..+++.||++     |+.+|..+....||||+|+.+||.++|+.|++..+|+|       |||||||..|
T Consensus        37 plhwaakegh~aivemll~r-----garvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwg  111 (448)
T KOG0195|consen   37 PLHWAAKEGHVAIVEMLLSR-----GARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWG  111 (448)
T ss_pred             hhhhhhhcccHHHHHHHHhc-----ccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhc
Confidence            37789999999999999998     99999999999999999999999999999999999887       9999999999


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCcc
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPK  144 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~  144 (377)
                      ...+.+-|++.|+.++.-. ++|.||+--
T Consensus       112 ydqiaedli~~ga~v~icn-k~g~tpldk  139 (448)
T KOG0195|consen  112 YDQIAEDLISCGAAVNICN-KKGMTPLDK  139 (448)
T ss_pred             HHHHHHHHHhccceeeecc-cCCCCchhh
Confidence            9999999999999998643 789999844

>PHA02917 ankyrin-like protein; Provisional

Probab=99.40  E-value=7.2e-13  Score=139.43  Aligned_cols=118  Identities=8%  Similarity=-0.021  Sum_probs=98.4

Q ss_pred             HHHHHHHHc---CCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHH----HHHHHHhCCC--CcC---hHHH
Q psy7030          42 KKYLLSVER---GDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLE----MTELLIVMGV--EPK---DALL  109 (377)
Q Consensus        42 ~~ll~Aa~~---g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~----iv~~Ll~~ga--~i~---tpLh  109 (377)
                      +.|+.|+..   |+.++++.||+.     |+|++.+|..|+||||.|+..||.+    +++.|++++.  +++   +++|
T Consensus        34 t~Lh~a~~~~~~~~~~~v~~Ll~~-----ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~  108 (661)
T PHA02917         34 NALHAYLFNEHCNNVEVVKLLLDS-----GTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSY  108 (661)
T ss_pred             cHHHHHHHhhhcCcHHHHHHHHHC-----CCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHH
Confidence            456666555   889999999997     9999999999999999999999954    5678887643  443   6778


Q ss_pred             HHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccc--cccChHHHHHhhhhhhHHHH
Q psy7030         110 QAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKS--CQNTAYRILLLLVSQRADVI  165 (377)
Q Consensus       110 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~a--c~~n~~~~l~~L~s~~~~~~  165 (377)
                      .|+..|+.|++++|+++|++++.++ ..|.||||.+  +..++.+++.+|.++|++++
T Consensus       109 ~a~~~~~~e~vk~Ll~~Gadin~~d-~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn  165 (661)
T PHA02917        109 MKSKNVDVDLIKVLVEHGFDLSVKC-ENHRSVIENYVMTDDPVPEIIDLFIENGCSVL  165 (661)
T ss_pred             HHhhcCCHHHHHHHHHcCCCCCccC-CCCccHHHHHHHccCCCHHHHHHHHHcCCCcc
Confidence            8999999999999999999999764 7899999964  45689999988888888654

>KOG1710|consensus

Probab=99.39  E-value=1.1e-11  Score=113.69  Aligned_cols=113  Identities=20%  Similarity=0.197  Sum_probs=99.5

Q ss_pred             CCCHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hH
Q psy7030          36 PLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DA  107 (377)
Q Consensus        36 ~l~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tp  107 (377)
                      .|+..+++++++..+|+.+....||+.     --++|.+|..|.|+|..|+..|+.+++++|+++|+|+|        ||
T Consensus         8 qld~~~~~Lle~i~Kndt~~a~~LLs~-----vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTp   82 (396)
T KOG1710|consen    8 QLDAPKSPLLEAIDKNDTEAALALLST-----VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTP   82 (396)
T ss_pred             cccchhhHHHHHHccCcHHHHHHHHHH-----hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccH
Confidence            467788899999999999999999996     45699999999999999999999999999999999998        99


Q ss_pred             HHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHH
Q psy7030         108 LLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       108 Lh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l  154 (377)
                      ||.|+-.|+.++-++|++.|+..... +..|.|+-.+|+--++-+.+
T Consensus        83 LmFAALSGn~dvcrllldaGa~~~~v-NsvgrTAaqmAAFVG~H~CV  128 (396)
T KOG1710|consen   83 LMFAALSGNQDVCRLLLDAGARMYLV-NSVGRTAAQMAAFVGHHECV  128 (396)
T ss_pred             HHHHHHcCCchHHHHHHhccCccccc-cchhhhHHHHHHHhcchHHH
Confidence            99999999999999999999987654 36788887776655555555

>KOG0505|consensus

Probab=99.39  E-value=7.2e-13  Score=130.46  Aligned_cols=116  Identities=21%  Similarity=0.143  Sum_probs=98.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-----------------
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-----------------  105 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-----------------  105 (377)
                      .++++|...|.++|+.|++.     |++||..|..||||||.|+.-||..++++|+.+|++..                 
T Consensus        76 alhq~~id~~~e~v~~l~e~-----ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea  150 (527)
T KOG0505|consen   76 ALHQACIDDNLEMVKFLVEN-----GANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEA  150 (527)
T ss_pred             hHHHHHhcccHHHHHHHHHh-----cCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcc
Confidence            36778888888888888887     99999999999999999999999999999999887551                 


Q ss_pred             -------------------------------------------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCC
Q psy7030         106 -------------------------------------------------DALLQAINSEFVEAVELLLEYEEIVHKEGEP  136 (377)
Q Consensus       106 -------------------------------------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~  136 (377)
                                                                       |+||.|+.+|..++.++|+++|.+++.++ .
T Consensus       151 ~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D-~  229 (527)
T KOG0505|consen  151 TLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKD-Y  229 (527)
T ss_pred             hhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccccc-c
Confidence                                                             89999999999999999999999998764 8


Q ss_pred             CCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         137 YLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       137 ~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      .||||||.|+.-+..++..+|..+|.+.
T Consensus       230 dgWtPlHAAA~Wg~~~~~elL~~~ga~~  257 (527)
T KOG0505|consen  230 DGWTPLHAAAHWGQEDACELLVEHGADM  257 (527)
T ss_pred             cCCCcccHHHHhhhHhHHHHHHHhhccc
Confidence            8999999988888888777777676654

>PHA02792 ankyrin-like protein; Provisional

Probab=99.39  E-value=4.8e-13  Score=137.38  Aligned_cols=107  Identities=15%  Similarity=0.116  Sum_probs=96.2

Q ss_pred             HHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHH-cCCHHHHHHHHhCCCCcC-------------------
Q psy7030          46 LSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIE-GENLEMTELLIVMGVEPK-------------------  105 (377)
Q Consensus        46 ~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~-~g~~~iv~~Ll~~ga~i~-------------------  105 (377)
                      .|..+|+.|.|+.|+++     |+|+|.+|..|+||+|+|+. ++|.|++++|+++||++.                   
T Consensus        78 ~~s~n~~lElvk~LI~~-----GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~  152 (631)
T PHA02792         78 LCSDNIDIELLKLLISK-----GLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEY  152 (631)
T ss_pred             HHHhcccHHHHHHHHHc-----CCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccc
Confidence            47889999999999997     99999999999999999966 799999999999998731                   


Q ss_pred             ------------------------hHHHHHHhcC-------CHHHHHHHHhcCCccCCCCCCCCCCCCccccccC--hHH
Q psy7030         106 ------------------------DALLQAINSE-------FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNT--AYR  152 (377)
Q Consensus       106 ------------------------tpLh~A~~~g-------~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n--~~~  152 (377)
                                              ||||+|+..+       +.|++++|+++|++++..+ ..|+||||+|..++  ..+
T Consensus       153 ~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d-~~g~t~l~~~~~~~~i~~e  231 (631)
T PHA02792        153 YNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYT-YREHTTLYYYVDKCDIKRE  231 (631)
T ss_pred             cchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccC-CCCChHHHHHHHcccchHH
Confidence                                    9999999999       8999999999999998765 67999999999988  777


Q ss_pred             HHHhhh
Q psy7030         153 ILLLLV  158 (377)
Q Consensus       153 ~l~~L~  158 (377)
                      ++.+|.
T Consensus       232 i~~~L~  237 (631)
T PHA02792        232 IFDALF  237 (631)
T ss_pred             HHHHHH
Confidence            775555

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.39  E-value=9.4e-13  Score=102.75  Aligned_cols=82  Identities=28%  Similarity=0.337  Sum_probs=74.8

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCcC---hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030          82 LTLAIEGENLEMTELLIVMGVEPK---DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus        82 Lh~A~~~g~~~iv~~Ll~~ga~i~---tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      ||+||+.|+.++++.|++.+.+++   ||||+|+..|+.+++++|+++|++++..+ ..|+||||.||..++.+++..|.
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll   79 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINLGNTALHYAAENGNLEIVKLLLENGADINSQD-KNGNTALHYAAENGNLEIVKLLL   79 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTSSSBHHHHHHHTTTHHHHHHHHHTTTCTT-BS-TTSSBHHHHHHHTTHHHHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhcccccccC-CCCCCHHHHHHHcCCHHHHHHHH
Confidence            799999999999999999998887   99999999999999999999999998765 89999999999999999998888


Q ss_pred             hhhHHH
Q psy7030         159 SQRADV  164 (377)
Q Consensus       159 s~~~~~  164 (377)
                      ++|.+.
T Consensus        80 ~~g~~~   85 (89)
T PF12796_consen   80 EHGADV   85 (89)
T ss_dssp             HTTT-T
T ss_pred             HcCCCC
Confidence            777654

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PHA02792 ankyrin-like protein; Provisional

Probab=99.38  E-value=1.6e-12  Score=133.64  Aligned_cols=99  Identities=17%  Similarity=0.053  Sum_probs=89.0

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCC--CcHHHHHHHcCCHH---HHHHHHhCCCCcC-------hHHHH
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLG--RSALTLAIEGENLE---MTELLIVMGVEPK-------DALLQ  110 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G--~TpLh~A~~~g~~~---iv~~Ll~~ga~i~-------tpLh~  110 (377)
                      .++.||.+|+.++++.|++.     |+|+|.+|.+|  .||||.|+.++..+   ++++|+++|++++       ||||+
T Consensus       342 ~~~~Aa~~gn~eIVelLIs~-----GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~  416 (631)
T PHA02792        342 KYFQKFDNRDPKVVEYILKN-----GNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYY  416 (631)
T ss_pred             HHHHHHHcCCHHHHHHHHHc-----CCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHH
Confidence            47889999999999999997     99999999875  69999988777654   6888999999987       99999


Q ss_pred             HHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccc
Q psy7030         111 AINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQ  147 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~  147 (377)
                      |+..++.+++++|+++|++++..+ ..|.||+|.|+.
T Consensus       417 Aa~~~n~eivelLLs~GADIN~kD-~~G~TpL~~A~~  452 (631)
T PHA02792        417 CIESHSVSLVEWLIDNGADINITT-KYGSTCIGICVI  452 (631)
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHH
Confidence            999999999999999999999764 889999999865

>KOG4177|consensus

Probab=99.38  E-value=8.1e-13  Score=142.28  Aligned_cols=109  Identities=16%  Similarity=0.176  Sum_probs=97.0

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      ++.|...++...++.+++.     |++++.++..|.||||.||..||.++|++|+++|++++       ||||.|+..|+
T Consensus       511 lhla~~~~~v~~~~~l~~~-----ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~  585 (1143)
T KOG4177|consen  511 LHLAADEDTVKVAKILLEH-----GANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGH  585 (1143)
T ss_pred             hhhhhhhhhHHHHHHHhhc-----CCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcCh
Confidence            5667778888888888876     99999999999999999999999999999999999987       99999999999


Q ss_pred             HHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         117 VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      .+|+++|+++|+++|..+ ..|.||||+|...+.++..-.|.
T Consensus       586 ~~i~~LLlk~GA~vna~d-~~g~TpL~iA~~lg~~~~~k~l~  626 (1143)
T KOG4177|consen  586 NDIAELLLKHGASVNAAD-LDGFTPLHIAVRLGYLSVVKLLK  626 (1143)
T ss_pred             HHHHHHHHHcCCCCCccc-ccCcchhHHHHHhcccchhhHHH
Confidence            999999999999999764 88999999999988888774443

>PHA02730 ankyrin-like protein; Provisional

Probab=99.37  E-value=2e-12  Score=134.08  Aligned_cols=108  Identities=7%  Similarity=0.029  Sum_probs=56.5

Q ss_pred             CHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCC--cC-------hHHHH---HHhcC
Q psy7030          52 DTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN----LEMTELLIVMGVE--PK-------DALLQ---AINSE  115 (377)
Q Consensus        52 ~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~----~~iv~~Ll~~ga~--i~-------tpLh~---A~~~g  115 (377)
                      +.++++.||+.     |+|+|.+ ..|+||||+|+.+++    .+++++|+++|++  ++       ||||.   |...+
T Consensus       358 ~ieIvelLIs~-----GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n  431 (672)
T PHA02730        358 SIPILRCMLDN-----GATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNN  431 (672)
T ss_pred             cHHHHHHHHHC-----CCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhcc
Confidence            35666666654     6666653 455666665555543    5666666665542  32       55552   22111


Q ss_pred             ---------CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         116 ---------FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       116 ---------~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                               ..+++++|+++|+++|.++ ..|.||||+|+..++.+++..|.++|++++.
T Consensus       432 ~~~~~~e~~~~~ivk~LIs~GADINakD-~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~  490 (672)
T PHA02730        432 CGYHCYETILIDVFDILSKYMDDIDMID-NENKTLLYYAVDVNNIQFARRLLEYGASVNT  490 (672)
T ss_pred             ccccccchhHHHHHHHHHhcccchhccC-CCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC
Confidence                     1234566666666555442 5556666666555555555555555554444

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.36  E-value=4.5e-12  Score=133.97  Aligned_cols=97  Identities=22%  Similarity=0.262  Sum_probs=85.5

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAI  112 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~  112 (377)
                      ...+++.|+..|+.+.++.|++.     |+|+|.+|..|+||||+|+.+|+.+++++|+++|++++       ||||+|+
T Consensus        82 ~~~~L~~aa~~G~~~~vk~LL~~-----Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~  156 (664)
T PTZ00322         82 LTVELCQLAASGDAVGARILLTG-----GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAE  156 (664)
T ss_pred             hHHHHHHHHHcCCHHHHHHHHHC-----CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            34568899999999999999997     99999999999999999999999999999999999886       9999999


Q ss_pred             hcCCHHHHHHHHhc-------CCccCCCCCCCCCCCC
Q psy7030         113 NSEFVEAVELLLEY-------EEIVHKEGEPYLSRKP  142 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~-------~~~~~~~~~~~~~t~l  142 (377)
                      ..|+.+++++|+++       |++.+... ..|.+++
T Consensus       157 ~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~-~~g~~~~  192 (664)
T PTZ00322        157 ENGFREVVQLLSRHSQCHFELGANAKPDS-FTGKPPS  192 (664)
T ss_pred             HCCcHHHHHHHHhCCCcccccCCCCCccc-cCCCCcc
Confidence            99999999999998       66665432 4455554

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.35  E-value=2.4e-12  Score=139.40  Aligned_cols=100  Identities=21%  Similarity=0.212  Sum_probs=83.5

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCC------------------------------
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN------------------------------   90 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~------------------------------   90 (377)
                      .+.++.||.+|+.++++.|++.     |+|+|.+|.+|+||||.|+..||                              
T Consensus       559 ~TpLh~Aa~~g~~~~v~~Ll~~-----gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g  633 (823)
T PLN03192        559 RTPLHIAASKGYEDCVLVLLKH-----ACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRN  633 (823)
T ss_pred             CCHHHHHHHcChHHHHHHHHhc-----CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhC
Confidence            4568889999999999999997     99999999999999986655554                              


Q ss_pred             -HHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccc
Q psy7030          91 -LEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKS  145 (377)
Q Consensus        91 -~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~a  145 (377)
                       .++++.|+++|++++       ||||.|+..|+.+++++|+++|++++..+...+.+|++.+
T Consensus       634 ~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~  696 (823)
T PLN03192        634 DLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELR  696 (823)
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHH
Confidence             555666778888886       9999999999999999999999999976533337776554

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.35  E-value=1e-11  Score=101.09  Aligned_cols=110  Identities=23%  Similarity=0.286  Sum_probs=98.1

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.++.|++.|+.+.++.|++.     |.+.+.+|..|.||+|.|+..++.++++.|+++|++++       ||+|.|+.
T Consensus         8 ~t~l~~a~~~~~~~~i~~li~~-----~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           8 RTPLHLAASNGHLEVVKLLLEN-----GADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             CCHHHHHHHcCcHHHHHHHHHc-----CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            3568889999999999999997     88889999999999999999999999999999996554       99999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHh
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLL  156 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~  156 (377)
                      .++.++++.|++.+.+.+..+ ..+.|+++.|...++.+.+..
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~  124 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARD-KDGRTPLHLAAKNGHLEVVKL  124 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccC-CCCCCHHHHHHhcCCHHHHHH
Confidence            999999999999998777654 788999999988887776643

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.34  E-value=2.4e-12  Score=111.18  Aligned_cols=83  Identities=16%  Similarity=0.195  Sum_probs=74.0

Q ss_pred             HHHHHHcCCHH---HHHHHHHhhccCCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHh-CCCCcC-------hHHHHH
Q psy7030          44 YLLSVERGDTA---TVRKCIKRAYRNHHIDINCVD-PLGRSALTLAIEGENLEMTELLIV-MGVEPK-------DALLQA  111 (377)
Q Consensus        44 ll~Aa~~g~~~---~v~~LL~~~~~~~g~dvn~~D-~~G~TpLh~A~~~g~~~iv~~Ll~-~ga~i~-------tpLh~A  111 (377)
                      |+.|+..|+.+   .++.|++.     |+|+|.+| ..|+||||+|+..|+.+++++|++ .|++++       ||||+|
T Consensus        59 Lh~a~~~~~~~~~e~v~~Ll~~-----gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A  133 (154)
T PHA02736         59 VHIVSNPDKADPQEKLKLLMEW-----GADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVA  133 (154)
T ss_pred             EEeecccCchhHHHHHHHHHHc-----CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHH
Confidence            45599999874   57888887     99999998 599999999999999999999998 488875       999999


Q ss_pred             HhcCCHHHHHHHHhcCCccC
Q psy7030         112 INSEFVEAVELLLEYEEIVH  131 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~~~~~~~  131 (377)
                      +..|+.+++++|+++|++.+
T Consensus       134 ~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736        134 CERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             HHcCCHHHHHHHHHcCCCCC
Confidence            99999999999999998764

>KOG0512|consensus

Probab=99.34  E-value=2.1e-12  Score=110.46  Aligned_cols=100  Identities=16%  Similarity=0.086  Sum_probs=81.6

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .++.|+.+|+.++|+.||..     |+|++++...|+||||-||+.++.+++..|+.+|+|++       ||||.|+...
T Consensus       100 pLHRAaYn~h~div~~ll~~-----gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~r  174 (228)
T KOG0512|consen  100 PLHRAAYNGHLDIVHELLLS-----GANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNR  174 (228)
T ss_pred             HHHHHHhcCchHHHHHHHHc-----cCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhccc
Confidence            48889999999999999997     99999999999999999999999999999999999998       9999999887


Q ss_pred             CHHH-HHHHHhcCCccCCCCCCCCCCCCccccc
Q psy7030         116 FVEA-VELLLEYEEIVHKEGEPYLSRKPPKSCQ  147 (377)
Q Consensus       116 ~~ei-v~~Ll~~~~~~~~~~~~~~~t~lh~ac~  147 (377)
                      +... +++|+....---...+..+.||+-+|-.
T Consensus       175 n~r~t~~~Ll~dryi~pg~~nn~eeta~~iARR  207 (228)
T KOG0512|consen  175 NSRDTLELLLHDRYIHPGLKNNLEETAFDIARR  207 (228)
T ss_pred             chHHHHHHHhhccccChhhhcCccchHHHHHHH
Confidence            6655 5666554322222333556677766543

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.32  E-value=1.1e-11  Score=118.07  Aligned_cols=108  Identities=13%  Similarity=0.145  Sum_probs=91.3

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCV-DPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~-D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~  112 (377)
                      .+.++.|++.|+.++++.|++.     |+|+|.+ +..|.||||+|+..|+.+++++|+++|++++       ||||+|+
T Consensus        71 ~TpLh~Aa~~~~~eivklLL~~-----GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~  145 (300)
T PHA02884         71 TNPLIYAIDCDNDDAAKLLIRY-----GADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELAL  145 (300)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHc-----CCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            3457889999999999999997     9999986 5689999999999999999999999999986       9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      ..++.+++.++..  ..    .++.+.+|.++.   ++.+++..|.||.+
T Consensus       146 ~~~~~~~~~~~~~--~~----~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        146 MICNNFLAFMICD--NE----ISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             HhCChhHHHHhcC--Cc----ccccccChhhhh---ccHHHHHHHHHHHH
Confidence            9999998876653  22    236677888876   35788888888876

>KOG4177|consensus

Probab=99.31  E-value=1.9e-12  Score=139.45  Aligned_cols=114  Identities=21%  Similarity=0.228  Sum_probs=79.0

Q ss_pred             HHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHH
Q psy7030          47 SVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEA  119 (377)
Q Consensus        47 Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~ei  119 (377)
                      |+..|+.+.++.+++.     +++.+...+.|-|++|+|...++...++.++++|++++       ||||.|+..|+.++
T Consensus       481 aaq~Gh~~~~~llle~-----~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~  555 (1143)
T KOG4177|consen  481 AAQEGHTEVVQLLLEG-----GANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDL  555 (1143)
T ss_pred             hhccCCchHHHHhhhc-----CCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchH
Confidence            4444444444444443     33333333444444444444444444444444444443       99999999999999


Q ss_pred             HHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         120 VELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       120 v~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      |++|+++|++++.++ +.|+||||.||..+.++++.+|..+|+.++.
T Consensus       556 VkfLLe~gAdv~ak~-~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna  601 (1143)
T KOG4177|consen  556 VKFLLEHGADVNAKD-KLGYTPLHQAAQQGHNDIAELLLKHGASVNA  601 (1143)
T ss_pred             HHHhhhCCccccccC-CCCCChhhHHHHcChHHHHHHHHHcCCCCCc
Confidence            999999999999877 9999999999999999999888877776655

>PHA02741 hypothetical protein; Provisional

Probab=99.28  E-value=1.7e-11  Score=107.73  Aligned_cols=86  Identities=22%  Similarity=0.295  Sum_probs=76.4

Q ss_pred             HHHHHHHHHcCC----HHHHHHHHHhhccCCCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHh-CCCCcC-------hH
Q psy7030          41 EKKYLLSVERGD----TATVRKCIKRAYRNHHIDINCVDP-LGRSALTLAIEGENLEMTELLIV-MGVEPK-------DA  107 (377)
Q Consensus        41 e~~ll~Aa~~g~----~~~v~~LL~~~~~~~g~dvn~~D~-~G~TpLh~A~~~g~~~iv~~Ll~-~ga~i~-------tp  107 (377)
                      .+.|+.|+..|+    .++++.|++.     |+|+|.+|. .|+||||+|+.+++.+++++|++ .|++++       ||
T Consensus        61 ~T~Lh~A~~~g~~~~~~~ii~~Ll~~-----gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tp  135 (169)
T PHA02741         61 QMCIHIAAEKHEAQLAAEIIDHLIEL-----GADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSP  135 (169)
T ss_pred             CcHHHHHHHcCChHHHHHHHHHHHHc-----CCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCH
Confidence            356788999999    5788888886     999999985 99999999999999999999998 588875       99


Q ss_pred             HHHHHhcCCHHHHHHHHhcCCccC
Q psy7030         108 LLQAINSEFVEAVELLLEYEEIVH  131 (377)
Q Consensus       108 Lh~A~~~g~~eiv~~Ll~~~~~~~  131 (377)
                      ||+|+..++.+++++|++.++...
T Consensus       136 L~~A~~~~~~~iv~~L~~~~~~~~  159 (169)
T PHA02741        136 FELAIDNEDVAMMQILREIVATSR  159 (169)
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHhc
Confidence            999999999999999999876543

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.27  E-value=4.1e-11  Score=107.45  Aligned_cols=114  Identities=24%  Similarity=0.284  Sum_probs=102.6

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCC-----HHHHHHHHhCCC--CcC--------
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN-----LEMTELLIVMGV--EPK--------  105 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~-----~~iv~~Ll~~ga--~i~--------  105 (377)
                      ...++.++..++.+.++.++..     |++++.+|..|.||||+|+.+|+     .++++.|+++|+  +..        
T Consensus        74 ~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~  148 (235)
T COG0666          74 RLPLHSAASKGDDKIVKLLLAS-----GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGN  148 (235)
T ss_pred             cCHHHHHHHcCcHHHHHHHHHc-----CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCC
Confidence            3457889999999999999997     99999999999999999999999     999999999999  332        


Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         106 DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       106 tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      ||||+|+..|+.+++++|++.|++++.. +..|.|+++.||..+..+.+..+...
T Consensus       149 tpl~~A~~~~~~~~~~~ll~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~l~~~  202 (235)
T COG0666         149 TPLHWAALNGDADIVELLLEAGADPNSR-NSYGVTALDPAAKNGRIELVKLLLDK  202 (235)
T ss_pred             chhHHHHHcCchHHHHHHHhcCCCCccc-ccCCCcchhhhcccchHHHHHHHHhc
Confidence            9999999999999999999999999876 48999999999999988888655543

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.23  E-value=2.7e-11  Score=130.04  Aligned_cols=114  Identities=11%  Similarity=-0.004  Sum_probs=93.9

Q ss_pred             HhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccC--------------CCCCcHHHHHHHcCCHHHHHHHHhCCCCc
Q psy7030          39 LEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVD--------------PLGRSALTLAIEGENLEMTELLIVMGVEP  104 (377)
Q Consensus        39 ~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D--------------~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i  104 (377)
                      ...+.++.||.+|+.++++.||+.     |+|+|.++              ..|+||||.|+..|+.+++++|+++|+|+
T Consensus       127 ~G~TpLhlAa~~~~~eiVklLL~~-----GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi  201 (743)
T TIGR00870       127 PGITALHLAAHRQNYEIVKLLLER-----GASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI  201 (743)
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHhC-----CCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch
Confidence            345678999999999999999997     99998653              36999999999999999999999999988


Q ss_pred             C-------hHHHHHHhcC---------CHHHHHHHHhcCCccCC------CCCCCCCCCCccccccChHHHHHhh
Q psy7030         105 K-------DALLQAINSE---------FVEAVELLLEYEEIVHK------EGEPYLSRKPPKSCQNTAYRILLLL  157 (377)
Q Consensus       105 ~-------tpLh~A~~~g---------~~eiv~~Ll~~~~~~~~------~~~~~~~t~lh~ac~~n~~~~l~~L  157 (377)
                      +       ||||+|+..+         ..++.+++++.++....      ..+..|.||||.|+..++.+.+..|
T Consensus       202 n~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lL  276 (743)
T TIGR00870       202 LTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLK  276 (743)
T ss_pred             hhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHH
Confidence            6       9999999987         34566777776665421      1346899999999999888877433

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0514|consensus

Probab=99.21  E-value=2e-11  Score=115.26  Aligned_cols=111  Identities=22%  Similarity=0.207  Sum_probs=88.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHc-----CCHHHHHHHHhCC-CCcC------hHHH
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEG-----ENLEMTELLIVMG-VEPK------DALL  109 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~-----g~~~iv~~Ll~~g-a~i~------tpLh  109 (377)
                      +.+|.|+..++.++|+.||+.    .-.|+|.+++-|.||.|+|+..     .+.++|+-|.+.| ++..      |+|+
T Consensus       270 TALHYsVSHaNF~VV~~LLDS----gvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALM  345 (452)
T KOG0514|consen  270 TALHYAVSHANFDVVSILLDS----GVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALM  345 (452)
T ss_pred             eeeeeeecccchHHHHHHhcc----CcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhh
Confidence            446669999999999999997    3578888889999999887654     3567777777654 2222      8999


Q ss_pred             HHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhh
Q psy7030         110 QAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLL  157 (377)
Q Consensus       110 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L  157 (377)
                      +|+.+|+.++|+.||..|+|+|..+ ..|.|+|..||+++..+++.+|
T Consensus       346 LAVSHGr~d~vk~LLacgAdVNiQD-dDGSTALMCA~EHGhkEivklL  392 (452)
T KOG0514|consen  346 LAVSHGRVDMVKALLACGADVNIQD-DDGSTALMCAAEHGHKEIVKLL  392 (452)
T ss_pred             hhhhcCcHHHHHHHHHccCCCcccc-CCccHHHhhhhhhChHHHHHHH
Confidence            9999999999999999999988654 7888999999999888888433

>KOG0507|consensus

Probab=99.18  E-value=2.4e-11  Score=123.83  Aligned_cols=120  Identities=17%  Similarity=0.129  Sum_probs=79.0

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhcc--------CCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC------
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYR--------NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK------  105 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~--------~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~------  105 (377)
                      +++.++.|++.||.+.+..+|+..+.        ....++|+.|.+|-|+||+|+.+|+.+++++|+++.+-.+      
T Consensus         3 k~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg   82 (854)
T KOG0507|consen    3 KKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKG   82 (854)
T ss_pred             hhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccC
Confidence            35566777777777777777775321        2334566777777777777777777777777777654332      


Q ss_pred             -hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         106 -DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       106 -tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                       +|||+|++.|+.|++++++.++...|.. +..|.||||.|++++.++.+..|.++
T Consensus        83 ~~plhlaaw~g~~e~vkmll~q~d~~na~-~~e~~tplhlaaqhgh~dvv~~Ll~~  137 (854)
T KOG0507|consen   83 ILPLHLAAWNGNLEIVKMLLLQTDILNAV-NIENETPLHLAAQHGHLEVVFYLLKK  137 (854)
T ss_pred             cceEEehhhcCcchHHHHHHhcccCCCcc-cccCcCccchhhhhcchHHHHHHHhc
Confidence             6777777777777777777777555543 25667777777777777777555433

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.15  E-value=7.4e-11  Score=83.48  Aligned_cols=51  Identities=24%  Similarity=0.411  Sum_probs=40.6

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLI   98 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll   98 (377)
                      .++.||+.|+.++++.|++.     |.|+|.+|.+|+||||+|+.+||.+++++|+
T Consensus         4 ~lh~A~~~g~~~~~~~Ll~~-----~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    4 PLHWAARSGNLEIVKLLLEH-----GADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             HHHHHHHTT-HHHHHHHHHT-----TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            57889999999999999987     8999999999999999999999999999886

...

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.15  E-value=3.6e-11  Score=85.89  Aligned_cols=44  Identities=30%  Similarity=0.411  Sum_probs=29.4

Q ss_pred             C-CcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHH
Q psy7030          68 H-IDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQA  111 (377)
Q Consensus        68 g-~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A  111 (377)
                      | .++|.+|..|+||||+||..|+.+++++|+++|++++       ||+|+|
T Consensus         5 ~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    5 GPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            6 9999999999999999999999999999999998886       888886

>KOG0514|consensus

Probab=99.14  E-value=1e-10  Score=110.52  Aligned_cols=103  Identities=23%  Similarity=0.266  Sum_probs=79.3

Q ss_pred             CCHHHHHHHHHhhccCCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHH
Q psy7030          51 GDTATVRKCIKRAYRNHHIDINCVD-PLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVEL  122 (377)
Q Consensus        51 g~~~~v~~LL~~~~~~~g~dvn~~D-~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~  122 (377)
                      .|.++|+.|..-      .|+|++- ..|+|+||+|+.+|+.++|+.||..|+|+|       |+|+.|+.+||.|++++
T Consensus       318 ~d~~vV~~LF~m------gnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivkl  391 (452)
T KOG0514|consen  318 ADRTVVERLFKM------GDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKL  391 (452)
T ss_pred             hhHHHHHHHHhc------cCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHH
Confidence            466778888774      4777654 568899999999999999999988888887       88999999999999988


Q ss_pred             HHhcC-CccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         123 LLEYE-EIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       123 Ll~~~-~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      ||... +++.. .|..|.|+|.+|-+.+.-++...|-++
T Consensus       392 LLA~p~cd~sL-tD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  392 LLAVPSCDISL-TDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             HhccCccccee-ecCCCchhhhhHHhcCchHHHHHHHHH
Confidence            88764 44433 447888888888888877776555433

>KOG0507|consensus

Probab=99.14  E-value=5.9e-11  Score=121.02  Aligned_cols=112  Identities=16%  Similarity=0.108  Sum_probs=99.7

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .+++||.+|+.++++.|++.     .+-++.+|..|.+|||+|+++|+.+++++|+.++..+|       ||||.|++.|
T Consensus        52 alhha~Lng~~~is~llle~-----ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhg  126 (854)
T KOG0507|consen   52 LLHHAVLNGQNQISKLLLDY-----EALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHG  126 (854)
T ss_pred             HHHHHHhcCchHHHHHHhcc-----hhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhc
Confidence            37889999999999999997     66777889999999999999999999999999985554       9999999999


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      |.|++++|+++|++.-.. ++.+.|++-.||+-+..+++..|.+.
T Consensus       127 h~dvv~~Ll~~~adp~i~-nns~~t~ldlA~qfgr~~Vvq~ll~~  170 (854)
T KOG0507|consen  127 HLEVVFYLLKKNADPFIR-NNSKETVLDLASRFGRAEVVQMLLQK  170 (854)
T ss_pred             chHHHHHHHhcCCCcccc-CcccccHHHHHHHhhhhHHHHHHhhh
Confidence            999999999999988654 47888999999999999999555544

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.12  E-value=1.5e-10  Score=81.87  Aligned_cols=47  Identities=32%  Similarity=0.481  Sum_probs=41.0

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHH
Q psy7030          78 GRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLL  124 (377)
Q Consensus        78 G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll  124 (377)
                      |+||||.|++.|+.++++.|+++|++++       ||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            7899999999999999999999998886       9999999999999999986

...

>KOG3676|consensus

Probab=99.06  E-value=3.3e-09  Score=109.57  Aligned_cols=111  Identities=21%  Similarity=0.156  Sum_probs=86.8

Q ss_pred             HHHHHHHHH---cCCHHHHHHHHHhhccCCCC-cccc-cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC----------
Q psy7030          41 EKKYLLSVE---RGDTATVRKCIKRAYRNHHI-DINC-VDPLGRSALTLAIEGENLEMTELLIVMGVEPK----------  105 (377)
Q Consensus        41 e~~ll~Aa~---~g~~~~v~~LL~~~~~~~g~-dvn~-~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~----------  105 (377)
                      |+-++.|..   .++.++++.||+.-.  +=+ |+-. -...|.||||+|+.+.+.++|++|++.|||++          
T Consensus       144 ET~Lh~~lL~~~~~~n~la~~LL~~~p--~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~  221 (782)
T KOG3676|consen  144 ETLLHKALLNLSDGHNELARVLLEIFP--KLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCP  221 (782)
T ss_pred             hhHHHHHHhcCchhHHHHHHHHHHHhH--HHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCc
Confidence            555666664   556699999998611  011 1212 23679999999999999999999999999995          


Q ss_pred             --------------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHH
Q psy7030         106 --------------------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       106 --------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l  154 (377)
                                          .||-.|+..+++|++++|+++|+|++..+ ..|+|.||+-......+.-
T Consensus       222 ~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqD-S~GNTVLH~lVi~~~~~My  289 (782)
T KOG3676|consen  222 DDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQD-SNGNTVLHMLVIHFVTEMY  289 (782)
T ss_pred             ccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccc-cCCChHHHHHHHHHHHHHH
Confidence                                69999999999999999999999999764 8999999985554333333

>KOG0505|consensus

Probab=99.05  E-value=3.7e-10  Score=111.56  Aligned_cols=88  Identities=27%  Similarity=0.365  Sum_probs=82.8

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAI  112 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~  112 (377)
                      ..-.++.|+..|+.+.++.||..     |+++|..+.+|.|+||-+|.-.|.+||++|+++|+++|       ||||.|+
T Consensus        40 ~sa~~l~A~~~~d~~ev~~ll~~-----ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaa  114 (527)
T KOG0505|consen   40 DSAVFLEACSRGDLEEVRKLLNR-----GASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAA  114 (527)
T ss_pred             chHHHHhccccccHHHHHHHhcc-----CCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhc
Confidence            45568899999999999999998     89999999999999999999999999999999999997       9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCC
Q psy7030         113 NSEFVEAVELLLEYEEIVHK  132 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~  132 (377)
                      ..||..++++|+++|+++..
T Consensus       115 scg~~~i~~~li~~gA~~~a  134 (527)
T KOG0505|consen  115 SCGYLNIVEYLIQHGANLLA  134 (527)
T ss_pred             ccccHHHHHHHHHhhhhhhh
Confidence            99999999999999998753

>KOG0515|consensus

Probab=99.03  E-value=4.5e-10  Score=110.39  Aligned_cols=93  Identities=22%  Similarity=0.192  Sum_probs=83.3

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      ||.|+..|..+.|+..+.+     -.|+...+..|.||||-|+..||.+||++|++.|+++|       ||||.|+..++
T Consensus       554 LLDaaLeGEldlVq~~i~e-----v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNn  628 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYE-----VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNN  628 (752)
T ss_pred             HHhhhhcchHHHHHHHHHh-----hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCc
Confidence            7789999999999999988     66888889999999999999999999999999999998       99999999999


Q ss_pred             HHHHHHHHhcCCccCCCCCCCCCCC
Q psy7030         117 VEAVELLLEYEEIVHKEGEPYLSRK  141 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~~~~~~~~~t~  141 (377)
                      ..+++.|+++|+.+-...-..+.|+
T Consensus       629 v~~ckqLVe~GaavfAsTlSDmeTa  653 (752)
T KOG0515|consen  629 VPMCKQLVESGAAVFASTLSDMETA  653 (752)
T ss_pred             hHHHHHHHhccceEEeeecccccch
Confidence            9999999999998875543444444

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.02  E-value=1.3e-09  Score=88.60  Aligned_cols=88  Identities=26%  Similarity=0.299  Sum_probs=77.8

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccc
Q psy7030          73 CVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKS  145 (377)
Q Consensus        73 ~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~a  145 (377)
                      .+|..|.||||.|+..|+.++++.|+++|.+.+       ||+|.|+..++.++++.|++++++++..+ ..+.+++|.|
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~l~~a   80 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARD-KDGNTPLHLA   80 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCCHHHHH
Confidence            356789999999999999999999999998743       99999999999999999999998777654 7888999999


Q ss_pred             cccChHHHHHhhhhhh
Q psy7030         146 CQNTAYRILLLLVSQR  161 (377)
Q Consensus       146 c~~n~~~~l~~L~s~~  161 (377)
                      +..++.+.+..|.+++
T Consensus        81 ~~~~~~~~~~~L~~~~   96 (126)
T cd00204          81 ARNGNLDVVKLLLKHG   96 (126)
T ss_pred             HHcCcHHHHHHHHHcC
Confidence            9999999887776554

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins

Probab=98.98  E-value=2.2e-09  Score=95.08  Aligned_cols=122  Identities=25%  Similarity=0.387  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHcCc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCh
Q psy7030         192 LVLLYVAGYIWEETCEVWKDGL--YRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDP  269 (377)
Q Consensus       192 ~~~~~~~~~~~~Ei~~~~~~g~--~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~  269 (377)
                      +-+++.+.+++|++.+++..|+  ++|++++||++|++....+....+.+.....+                        
T Consensus         2 ~~~~~~~~f~~e~~l~~~~~~~~~~~y~~~~~~~~d~~~~~~~~~~~~~~~~~~~~------------------------   57 (200)
T PF00520_consen    2 LEIIFDVIFILEIVLRFFALGFKRRRYFRSWWNWFDFISVIPSIVSVILRSYGSAS------------------------   57 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCG-GCCCCSHHHHHHHHHHHHHCCHHCCHCSS--H------------------------
T ss_pred             ChHHHHHHHHHHHHHHHHHhccHHHHHhcChhhccccccccccccccccccccccc------------------------
Confidence            3456788899999999999997  89999999999998877775554444321100                        


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q psy7030         270 QLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTEL  340 (377)
Q Consensus       270 ~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~~y~~~  340 (377)
                      .   ..+.++.-++-++|++++++.++.+|+++.++.++.+++.+++.++.+++.+|+++.+.+|....+.
T Consensus        58 ~---~~~~~~~~~l~~~R~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~lf~~~~~~  125 (200)
T PF00520_consen   58 A---QSLLRIFRLLRLLRLLRLLRRFRSLRRLLRALIRSFPDLFKFILLLFIVLLFFACIGYQLFGGSDNS  125 (200)
T ss_dssp             H---CHCHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS--
T ss_pred             c---cceEEEEEeeccccccccccccccccccccccccccccccccccccccccccccchhheeccccccc
Confidence            0   2467888889999999999999999999999999999999999999999999999999999876543

The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....

>KOG4214|consensus

Probab=98.95  E-value=2.2e-09  Score=82.92  Aligned_cols=66  Identities=20%  Similarity=0.238  Sum_probs=58.3

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC------hHHHHHHh
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK------DALLQAIN  113 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~------tpLh~A~~  113 (377)
                      +++.||..|+.++++.|+..     |+|++.+|++|-|||.-|+..||.++|++|+++|++-.      +++.-|..
T Consensus        37 plhyAAD~GQl~ilefli~i-----GA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eate  108 (117)
T KOG4214|consen   37 PLHYAADYGQLSILEFLISI-----GANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEATE  108 (117)
T ss_pred             cchHhhhcchHHHHHHHHHh-----ccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhcc
Confidence            34559999999999999998     99999999999999999999999999999999998764      55555543

>KOG4369|consensus

Probab=98.92  E-value=1.7e-09  Score=113.77  Aligned_cols=129  Identities=19%  Similarity=0.186  Sum_probs=100.2

Q ss_pred             CCCCCCCCCCCCCCHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc
Q psy7030          25 TQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP  104 (377)
Q Consensus        25 ~~~~~~~~~~~~l~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i  104 (377)
                      ..++...+.+++||.       ||..||.|.++.|+.+     |+++..+|+.|-+||.+|+..||..+|+.|+++.+++
T Consensus       749 id~~Te~n~~t~LT~-------acaggh~e~vellv~r-----ganiehrdkkgf~plImaatagh~tvV~~llk~ha~v  816 (2131)
T KOG4369|consen  749 IDPLTEPNIKTNLTS-------ACAGGHREEVELLVVR-----GANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADV  816 (2131)
T ss_pred             eccccCccccccccc-------cccCccHHHHHHHHHh-----cccccccccccchhhhhhcccCchHHHHHHHhhhhhh
Confidence            445666677777777       9999999999999998     9999999999999999999999999999999998887


Q ss_pred             C--------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         105 K--------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       105 ~--------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      +        |+|.+||..|..++|++||.+|++--.++ -...|||..|...+..+++..|.|+|.+++.
T Consensus       817 eaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrn-vsDytPlsla~Sggy~~iI~~llS~GseInS  885 (2131)
T KOG4369|consen  817 EAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRN-VSDYTPLSLARSGGYTKIIHALLSSGSEINS  885 (2131)
T ss_pred             hhhcccccCceEEEecCCCcchHHHHHHHhhccccccc-hhhcCchhhhcCcchHHHHHHHhhccccccc
Confidence            5        77777777777777777777776443221 2344677667666677777555555544443

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=98.79  E-value=3.7e-08  Score=104.42  Aligned_cols=80  Identities=18%  Similarity=0.140  Sum_probs=73.1

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHH
Q psy7030          80 SALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYR  152 (377)
Q Consensus        80 TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~  152 (377)
                      ++||.|+.+|+.++++.|+++|++++       ||||+|+..|+.+++++|+++|++++..+ ..|.||||.|+..++.+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d-~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLD-KDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHCCcHH
Confidence            35889999999999999999999886       99999999999999999999999998754 78999999999999999


Q ss_pred             HHHhhhhh
Q psy7030         153 ILLLLVSQ  160 (377)
Q Consensus       153 ~l~~L~s~  160 (377)
                      ++..|.++
T Consensus       163 iv~~Ll~~  170 (664)
T PTZ00322        163 VVQLLSRH  170 (664)
T ss_pred             HHHHHHhC
Confidence            99766655

>PF13606 Ank_3: Ankyrin repeat

Probab=98.71  E-value=1.6e-08  Score=62.48  Aligned_cols=29  Identities=28%  Similarity=0.469  Sum_probs=26.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCcC
Q psy7030          77 LGRSALTLAIEGENLEMTELLIVMGVEPK  105 (377)
Q Consensus        77 ~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~  105 (377)
                      +|+||||+||+.|+.|++++|+++|+|++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            58999999999999999999999999886

>KOG1710|consensus

Probab=98.71  E-value=5.3e-08  Score=89.75  Aligned_cols=79  Identities=18%  Similarity=0.108  Sum_probs=72.3

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINC-VDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~-~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      -+.+|+.+|+.+.|+.||+.     |+|+|. ++..+.||||.|+..|+.++.++|++.|+...       |+-..|+.-
T Consensus        48 ~LahAaykGnl~~v~lll~~-----gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFV  122 (396)
T KOG1710|consen   48 VLAHAAYKGNLTLVELLLEL-----GADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFV  122 (396)
T ss_pred             HHHHHHhcCcHHHHHHHHHh-----CCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHh
Confidence            36679999999999999998     999997 77889999999999999999999999998775       999999999


Q ss_pred             CCHHHHHHHHhc
Q psy7030         115 EFVEAVELLLEY  126 (377)
Q Consensus       115 g~~eiv~~Ll~~  126 (377)
                      |+.++|..+=.+
T Consensus       123 G~H~CV~iINN~  134 (396)
T KOG1710|consen  123 GHHECVAIINNH  134 (396)
T ss_pred             cchHHHHHHhcc
Confidence            999999987543

>KOG0515|consensus

Probab=98.70  E-value=2.5e-08  Score=98.36  Aligned_cols=80  Identities=18%  Similarity=0.183  Sum_probs=69.0

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc--------ChHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP--------KDALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i--------~tpLh~A~  112 (377)
                      -+.||.|++.||.++|++||+.     |+|+|+.|.+||||||.|+.-++..+++.|+++|+-+        .||..-+-
T Consensus       584 ITaLHNAiCaghyeIVkFLi~~-----ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCe  658 (752)
T KOG0515|consen  584 ITALHNAICAGHYEIVKFLIEF-----GANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCE  658 (752)
T ss_pred             hhHHhhhhhcchhHHHHHHHhc-----CCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcc
Confidence            3568899999999999999997     9999999999999999999999999999999999754        36654432


Q ss_pred             --hcCCHHHHHHHHh
Q psy7030         113 --NSEFVEAVELLLE  125 (377)
Q Consensus       113 --~~g~~eiv~~Ll~  125 (377)
                        +.|..+|.++|..
T Consensus       659 e~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  659 EMEEGYDQCSQYLYG  673 (752)
T ss_pred             hhhhhHHHHHHHHHH
Confidence              3578889999864

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=98.69  E-value=9.2e-09  Score=73.36  Aligned_cols=48  Identities=19%  Similarity=0.089  Sum_probs=29.1

Q ss_pred             HHhCC-CCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccc
Q psy7030          97 LIVMG-VEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKS  145 (377)
Q Consensus        97 Ll~~g-a~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~a  145 (377)
                      |+++| ++++       ||||+|+..|+.+++++|++.|++++.++ ..|+||+|+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d-~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKD-KDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT----TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCc-CCCCCHHHhC
Confidence            45666 5554       99999999999999999999999999764 8899999976

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=98.66  E-value=7.2e-08  Score=86.24  Aligned_cols=82  Identities=24%  Similarity=0.309  Sum_probs=75.2

Q ss_pred             HHHHHHHHHcCC-----HHHHHHHHHhhccCCCC---cccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------
Q psy7030          41 EKKYLLSVERGD-----TATVRKCIKRAYRNHHI---DINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------  105 (377)
Q Consensus        41 e~~ll~Aa~~g~-----~~~v~~LL~~~~~~~g~---dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------  105 (377)
                      .+.++.|+..|+     .++++.||+.     |+   +.+.+|..|+||||+|+..|+.+++++|++.|++++       
T Consensus       107 ~t~l~~a~~~~~~~~~~~~~~~~ll~~-----g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~  181 (235)
T COG0666         107 DTPLHLAALNGNPPEGNIEVAKLLLEA-----GADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGV  181 (235)
T ss_pred             CcHHHHHHhcCCcccchHHHHHHHHHc-----CCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCC
Confidence            355778999999     9999999998     88   566679999999999999999999999999998775       


Q ss_pred             hHHHHHHhcCCHHHHHHHHhcC
Q psy7030         106 DALLQAINSEFVEAVELLLEYE  127 (377)
Q Consensus       106 tpLh~A~~~g~~eiv~~Ll~~~  127 (377)
                      |+++.|+..++.++++.+++.+
T Consensus       182 t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         182 TALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             cchhhhcccchHHHHHHHHhcC
Confidence            9999999999999999999976

>KOG0705|consensus

Probab=98.62  E-value=1.1e-07  Score=94.63  Aligned_cols=105  Identities=26%  Similarity=0.308  Sum_probs=85.8

Q ss_pred             CCCCCCCCCCCCCCHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc
Q psy7030          25 TQPFDMPNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP  104 (377)
Q Consensus        25 ~~~~~~~~~~~~l~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i  104 (377)
                      .+++.+...+..=.+...+|+.|+...|+..+-.||.... ....|-.+.+.+|+||||+||+.||+.+.++|+-+|+|+
T Consensus       609 eqklFLaPl~~te~~lgqqLl~A~~~~Dl~t~~lLLAhg~-~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv  687 (749)
T KOG0705|consen  609 EQKLFLAPLPCTEEPLGQQLLRAVAAEDLQTAILLLAHGS-REEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDV  687 (749)
T ss_pred             HHHhhcCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhccC-chhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccc
Confidence            5566777777644455788999999999999999998611 001222357788999999999999999999999999887


Q ss_pred             C-------hHHHHHHhcCCHHHHHHHHhcCCcc
Q psy7030         105 K-------DALLQAINSEFVEAVELLLEYEEIV  130 (377)
Q Consensus       105 ~-------tpLh~A~~~g~~eiv~~Ll~~~~~~  130 (377)
                      .       |||.||-+.|..|++.+|+++|+..
T Consensus       688 ~~rda~g~t~l~yar~a~sqec~d~llq~gcp~  720 (749)
T KOG0705|consen  688 MARDAHGRTALFYARQAGSQECIDVLLQYGCPD  720 (749)
T ss_pred             eecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence            4       9999999999999999999999744

>KOG0506|consensus

Probab=98.60  E-value=4e-08  Score=95.83  Aligned_cols=82  Identities=24%  Similarity=0.337  Sum_probs=73.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCcC-------hHHHHHHh
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVM-GVEPK-------DALLQAIN  113 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~-ga~i~-------tpLh~A~~  113 (377)
                      .+++.|++.||+..++.+.-.     |.|.+++|.+.||+||.|+..||.+++++|++. +++++       |||.-|..
T Consensus       508 i~~~~aa~~GD~~alrRf~l~-----g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  508 INVMYAAKNGDLSALRRFALQ-----GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             hhhhhhhhcCCHHHHHHHHHh-----cccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            358899999999999988766     999999999999999999999999999999984 56654       99999999


Q ss_pred             cCCHHHHHHHHhcCC
Q psy7030         114 SEFVEAVELLLEYEE  128 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~  128 (377)
                      .+|.+++++|-+...
T Consensus       583 F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  583 FKHKEVVKLLEEAQY  597 (622)
T ss_pred             cCcHHHHHHHHHHhc
Confidence            999999999987544

>KOG0818|consensus

Probab=98.53  E-value=3.4e-07  Score=89.80  Aligned_cols=83  Identities=24%  Similarity=0.275  Sum_probs=76.5

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVD-PLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQA  111 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D-~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A  111 (377)
                      ..++|+..++.|+.++.-.||..     |+++|..+ ..|.||||.|++.|+.--+++|.-.|+|++       ||+.+|
T Consensus       133 LsrQLhasvRt~nlet~LRll~l-----GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~A  207 (669)
T KOG0818|consen  133 LSKQLHSSVRTGNLETCLRLLSL-----GAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYA  207 (669)
T ss_pred             HHHHHHHHhhcccHHHHHHHHHc-----ccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHH
Confidence            35789999999999999999998     99999877 469999999999999999999999999997       999999


Q ss_pred             HhcCCHHHHHHHHhcC
Q psy7030         112 INSEFVEAVELLLEYE  127 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~~~  127 (377)
                      -+.||.++.+.|++..
T Consensus       208 R~~gH~~laeRl~e~~  223 (669)
T KOG0818|consen  208 RQGGHHELAERLVEIQ  223 (669)
T ss_pred             HhcCchHHHHHHHHHH
Confidence            9999999999998744

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.45  E-value=2.5e-07  Score=58.35  Aligned_cols=29  Identities=21%  Similarity=0.353  Sum_probs=23.2

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCcC
Q psy7030          77 LGRSALTLAIEGENLEMTELLIVMGVEPK  105 (377)
Q Consensus        77 ~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~  105 (377)
                      +|+||||+|+..|+.+++++|+++|++++
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~   29 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADIN   29 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence            47888888888888888888888887764

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG4369|consensus

Probab=98.39  E-value=4.6e-07  Score=96.11  Aligned_cols=105  Identities=19%  Similarity=0.267  Sum_probs=50.3

Q ss_pred             HHHHHcCCHHHHHHHHHhhccCCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          45 LLSVERGDTATVRKCIKRAYRNHHIDINC-VDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        45 l~Aa~~g~~~~v~~LL~~~~~~~g~dvn~-~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      +.|+-.||..+|+.||..     .+++++ .|+.+.|+|-+||..|..++|++||.+|++-.       |||.+|...|.
T Consensus       795 Imaatagh~tvV~~llk~-----ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy  869 (2131)
T KOG4369|consen  795 IMAATAGHITVVQDLLKA-----HADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGY  869 (2131)
T ss_pred             hhhcccCchHHHHHHHhh-----hhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcch
Confidence            334555555555555554     444443 44455555555555555555555555554332       55555555555


Q ss_pred             HHHHHHHHhcCCccC-CCCCCCCCCCCccccccChHHHH
Q psy7030         117 VEAVELLLEYEEIVH-KEGEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~-~~~~~~~~t~lh~ac~~n~~~~l  154 (377)
                      ++++++|+++|+.+| +.+.+.|-.||..|..+++-.+.
T Consensus       870 ~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at  908 (2131)
T KOG4369|consen  870 TKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAAT  908 (2131)
T ss_pred             HHHHHHHhhcccccccccccccCcchhhhhhhccccHHH
Confidence            555555555554444 22333444444444444333333

>KOG0783|consensus

Probab=98.33  E-value=2.7e-07  Score=95.36  Aligned_cols=97  Identities=18%  Similarity=0.174  Sum_probs=76.9

Q ss_pred             HHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHHHhcCCHH
Q psy7030          47 SVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQAINSEFVE  118 (377)
Q Consensus        47 Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A~~~g~~e  118 (377)
                      +.-+|...-++.++++.   .+--+|.+|..|||+||+|+..|..++++-|+.||+++.        ||||.|+..|++|
T Consensus        24 ~~tKs~~Nqlk~F~~k~---c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~id  100 (1267)
T KOG0783|consen   24 SKTKSEPNQLKGFSEKS---CQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNID  100 (1267)
T ss_pred             hhhcCChhHHHHHHHHh---hhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHH
Confidence            33444444466666651   122368899999999999999999999999999999986        9999999999999


Q ss_pred             HHHHHHhcCCccCCCCCCCCCCCCccccc
Q psy7030         119 AVELLLEYEEIVHKEGEPYLSRKPPKSCQ  147 (377)
Q Consensus       119 iv~~Ll~~~~~~~~~~~~~~~t~lh~ac~  147 (377)
                      ++-+||++|++..-.+ +.|..||..-|.
T Consensus       101 ca~lLL~~g~SL~i~D-keglsplq~~~r  128 (1267)
T KOG0783|consen  101 CASLLLSKGRSLRIKD-KEGLSPLQFLSR  128 (1267)
T ss_pred             HHHHHHhcCCceEEec-ccCCCHHHHHhh
Confidence            9999999998876443 777777755433

>KOG0511|consensus

Probab=98.25  E-value=2e-06  Score=82.18  Aligned_cols=79  Identities=23%  Similarity=0.272  Sum_probs=65.7

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC------hHHHHHHhc
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK------DALLQAINS  114 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~------tpLh~A~~~  114 (377)
                      -.++.+||+.||.+.|+.|++.     |.|+|.+|+...+||.+|+..||.++|++|+++||-..      .-.|+++-+
T Consensus        37 f~elceacR~GD~d~v~~LVet-----gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~YgaLn  111 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVET-----GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGALN  111 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHh-----CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhhhh
Confidence            4568899999999999999998     99999999999999999999999999999999998654      556666655


Q ss_pred             CCHHHHHHHHhc
Q psy7030         115 EFVEAVELLLEY  126 (377)
Q Consensus       115 g~~eiv~~Ll~~  126 (377)
                      .++  =++|+++
T Consensus       112 d~I--R~mllsy  121 (516)
T KOG0511|consen  112 DRI--RRMLLSY  121 (516)
T ss_pred             HHH--HHHHHHH
Confidence            433  3445543

>KOG0782|consensus

Probab=98.21  E-value=7.2e-06  Score=81.79  Aligned_cols=112  Identities=16%  Similarity=0.096  Sum_probs=90.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC---------cChHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVE---------PKDALLQA  111 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~---------i~tpLh~A  111 (377)
                      .+++++|+..+|.-.+...-..     |-+.-.++.+.+|.||+|++.|+-|+|+++++||-.         ..|+||-|
T Consensus       867 seeil~av~~~D~~klqE~h~~-----gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhka  941 (1004)
T KOG0782|consen  867 SEEILRAVLSSDLMKLQETHLN-----GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKA  941 (1004)
T ss_pred             cHHHHHHHHhccHHHHHHHHhc-----CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHH
Confidence            3459999999997665555443     777888999999999999999999999999999842         12999999


Q ss_pred             HhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         112 INSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      +..++..+.++|++.|++..+. +..|.||-.-|-+.+..+....|.
T Consensus       942 a~~~~r~vc~~lvdagasl~kt-d~kg~tp~eraqqa~d~dlaayle  987 (1004)
T KOG0782|consen  942 ACQRNRAVCQLLVDAGASLRKT-DSKGKTPQERAQQAGDPDLAAYLE  987 (1004)
T ss_pred             HHhcchHHHHHHHhcchhheec-ccCCCChHHHHHhcCCchHHHHHh
Confidence            9999999999999999999765 488888876666666666554443

>PF13606 Ank_3: Ankyrin repeat

Probab=98.07  E-value=4.3e-06  Score=51.57  Aligned_cols=27  Identities=30%  Similarity=0.261  Sum_probs=25.7

Q ss_pred             ChHHHHHHhcCCHHHHHHHHhcCCccC
Q psy7030         105 KDALLQAINSEFVEAVELLLEYEEIVH  131 (377)
Q Consensus       105 ~tpLh~A~~~g~~eiv~~Ll~~~~~~~  131 (377)
                      +||||+|+..|+.|++++|+++|+++|
T Consensus         3 ~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    3 NTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            499999999999999999999999886

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.02  E-value=8.5e-06  Score=51.26  Aligned_cols=31  Identities=19%  Similarity=0.180  Sum_probs=28.1

Q ss_pred             cChHHHHHHhcCCHHHHHHHHhcCCccCCCC
Q psy7030         104 PKDALLQAINSEFVEAVELLLEYEEIVHKEG  134 (377)
Q Consensus       104 i~tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~  134 (377)
                      ..||||+|+..|+.+++++|+++|++++..+
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            3499999999999999999999999998653

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG2384|consensus

Probab=97.98  E-value=1.9e-05  Score=69.08  Aligned_cols=79  Identities=22%  Similarity=0.121  Sum_probs=63.4

Q ss_pred             CCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCC
Q psy7030          68 HIDINCVDPLGRSALTLAIEGENLEMTELLIVMG-VEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLS  139 (377)
Q Consensus        68 g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~g-a~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~  139 (377)
                      +.|+|++|..|+||++.|+..|+.+.+.+|+.+| +.++       +++.+|-+.|+.++++.|.+...+-.... +...
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~-nss~   80 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPM-NSSR   80 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcc-cCCC
Confidence            5689999999999999999999999999999999 6665       99999999999999999998754433221 2333


Q ss_pred             CCCccccc
Q psy7030         140 RKPPKSCQ  147 (377)
Q Consensus       140 t~lh~ac~  147 (377)
                      ++-...|+
T Consensus        81 ~e~lfyCE   88 (223)
T KOG2384|consen   81 DEALFYCE   88 (223)
T ss_pred             CCccchhh
Confidence            44444555

>KOG0522|consensus

Probab=97.94  E-value=2.3e-05  Score=78.09  Aligned_cols=81  Identities=20%  Similarity=0.286  Sum_probs=67.2

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      ++.++-..+.+-...++...   .+..++.+|..|+||||+|+..||.+.++.|+.+|+++.       +|||-|+..|+
T Consensus        24 lh~~~~~~~~~sl~~el~~~---~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~  100 (560)
T KOG0522|consen   24 LHWAVVTTDSDSLEQELLAK---VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGN  100 (560)
T ss_pred             cchhhhccchhhHHHHHhhh---hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCC
Confidence            33477777777666655441   267888999999999999999999999999999999874       99999999999


Q ss_pred             HHHHHHHHhcC
Q psy7030         117 VEAVELLLEYE  127 (377)
Q Consensus       117 ~eiv~~Ll~~~  127 (377)
                      .+++..++.+-
T Consensus       101 ~q~i~~vlr~~  111 (560)
T KOG0522|consen  101 EQIITEVLRHL  111 (560)
T ss_pred             HHHHHHHHHHh
Confidence            99988887654

>KOG0818|consensus

Probab=97.49  E-value=0.00025  Score=70.19  Aligned_cols=82  Identities=18%  Similarity=0.142  Sum_probs=70.0

Q ss_pred             cccCCCCCc------HHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCC
Q psy7030          72 NCVDPLGRS------ALTLAIEGENLEMTELLIVMGVEPK--------DALLQAINSEFVEAVELLLEYEEIVHKEGEPY  137 (377)
Q Consensus        72 n~~D~~G~T------pLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~  137 (377)
                      -++|.+|-+      -||-.++.|+.++.--|+..|++.|        ||||.|++.|+...+++|+-+|+|++..+ ..
T Consensus       121 ~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d-~~  199 (669)
T KOG0818|consen  121 PCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQD-SS  199 (669)
T ss_pred             CCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCC-CC
Confidence            356666655      4799999999999999999999997        99999999999999999999999998754 88


Q ss_pred             CCCCCccccccChHHHH
Q psy7030         138 LSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       138 ~~t~lh~ac~~n~~~~l  154 (377)
                      |.||+-+|=+.|.-+..
T Consensus       200 GmtP~~~AR~~gH~~la  216 (669)
T KOG0818|consen  200 GMTPVDYARQGGHHELA  216 (669)
T ss_pred             CCcHHHHHHhcCchHHH
Confidence            99999888777655544

>KOG0521|consensus

Probab=97.45  E-value=0.00014  Score=77.82  Aligned_cols=86  Identities=21%  Similarity=0.109  Sum_probs=70.5

Q ss_pred             CCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCC
Q psy7030          68 HIDINC--VDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYL  138 (377)
Q Consensus        68 g~dvn~--~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~  138 (377)
                      |.++|-  +-..|.|+||.|+..|...++++|+++|+++|       ||+|.+...|+...+..|+++|++.+..+ +.|
T Consensus       644 ~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~-~~~  722 (785)
T KOG0521|consen  644 GCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFD-PDG  722 (785)
T ss_pred             hhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccC-ccC
Confidence            666653  44568999999999999999999999999887       99999999999999999999999988654 888


Q ss_pred             CCCCccccccChHHHH
Q psy7030         139 SRKPPKSCQNTAYRIL  154 (377)
Q Consensus       139 ~t~lh~ac~~n~~~~l  154 (377)
                      .+++++|.+.++-+..
T Consensus       723 ~~~l~~a~~~~~~d~~  738 (785)
T KOG0521|consen  723 KLPLDIAMEAANADIV  738 (785)
T ss_pred             cchhhHHhhhccccHH
Confidence            8999887544444443

>KOG0521|consensus

Probab=97.42  E-value=8.8e-05  Score=79.34  Aligned_cols=84  Identities=25%  Similarity=0.330  Sum_probs=73.3

Q ss_pred             CCHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHH
Q psy7030          37 LTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALL  109 (377)
Q Consensus        37 l~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh  109 (377)
                      +...-..++.|+..|+.-.++.||+.     |+|+|.+|..|+||||.+...|+...+..|+++|++.+       +|++
T Consensus       653 ~~~~~s~lh~a~~~~~~~~~e~ll~~-----ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~  727 (785)
T KOG0521|consen  653 LCIGCSLLHVAVGTGDSGAVELLLQN-----GADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLD  727 (785)
T ss_pred             hhcccchhhhhhccchHHHHHHHHhc-----CCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhh
Confidence            33344457889999999999999997     99999999999999999999999999999999999886       9999


Q ss_pred             HHHhcCCHHHHHHHHh
Q psy7030         110 QAINSEFVEAVELLLE  125 (377)
Q Consensus       110 ~A~~~g~~eiv~~Ll~  125 (377)
                      +|....+.+++-++..
T Consensus       728 ~a~~~~~~d~~~l~~l  743 (785)
T KOG0521|consen  728 IAMEAANADIVLLLRL  743 (785)
T ss_pred             HHhhhccccHHHHHhh
Confidence            9988877777666643

>KOG0506|consensus

Probab=97.38  E-value=0.00016  Score=71.22  Aligned_cols=84  Identities=15%  Similarity=0.114  Sum_probs=71.3

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhc-CCccCCCCCCCCCCCCccc
Q psy7030          74 VDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEY-EEIVHKEGEPYLSRKPPKS  145 (377)
Q Consensus        74 ~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~-~~~~~~~~~~~~~t~lh~a  145 (377)
                      ++.++.-++++|+++|.+...+-+.-.|.|++       |+||.|+..|+++++|+|++. +.+.+.+ +..|+|||-.|
T Consensus       502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~k-DRw~rtPlDdA  580 (622)
T KOG0506|consen  502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPK-DRWGRTPLDDA  580 (622)
T ss_pred             ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChh-hccCCCcchHh
Confidence            44567789999999999999998888888886       999999999999999999985 5555554 48999999999


Q ss_pred             cccChHHHHHhhh
Q psy7030         146 CQNTAYRILLLLV  158 (377)
Q Consensus       146 c~~n~~~~l~~L~  158 (377)
                      -..++.+.+.+|.
T Consensus       581 ~~F~h~~v~k~L~  593 (622)
T KOG0506|consen  581 KHFKHKEVVKLLE  593 (622)
T ss_pred             HhcCcHHHHHHHH
Confidence            8888888876654

>KOG0511|consensus

Probab=97.30  E-value=0.00064  Score=65.36  Aligned_cols=72  Identities=21%  Similarity=0.177  Sum_probs=57.7

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChH
Q psy7030          79 RSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAY  151 (377)
Q Consensus        79 ~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~  151 (377)
                      .--|..||+.|..+.++.|++.|.++|       .||.+|+-.||.++|++|+++|+-..++. -.| .--|+++-+.+.
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdt-f~G-~RC~YgaLnd~I  114 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDT-FDG-DRCHYGALNDRI  114 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccc-cCc-chhhhhhhhHHH
Confidence            456789999999999999999999998       89999999999999999999999876542 333 333455444433


Q ss_pred             H
Q psy7030         152 R  152 (377)
Q Consensus       152 ~  152 (377)
                      +
T Consensus       115 R  115 (516)
T KOG0511|consen  115 R  115 (516)
T ss_pred             H
Confidence            3

>KOG0782|consensus

Probab=97.17  E-value=0.00057  Score=68.64  Aligned_cols=80  Identities=16%  Similarity=0.157  Sum_probs=69.7

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      ++.|++.|+-++|+++|+..   ..--.+..|+.|.|+||-|+..++..+.++|++.|+...       ||-..|-+.|.
T Consensus       903 lh~a~~tg~~eivkyildh~---p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d  979 (1004)
T KOG0782|consen  903 LHYAAKTGNGEIVKYILDHG---PSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGD  979 (1004)
T ss_pred             HHHHHhcCChHHHHHHHhcC---CHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCC
Confidence            77899999999999999971   122246788999999999999999999999999998663       99999999999


Q ss_pred             HHHHHHHHhc
Q psy7030         117 VEAVELLLEY  126 (377)
Q Consensus       117 ~eiv~~Ll~~  126 (377)
                      .|...+|-+.
T Consensus       980 ~dlaayle~r  989 (1004)
T KOG0782|consen  980 PDLAAYLESR  989 (1004)
T ss_pred             chHHHHHhhh
Confidence            9999999654

>KOG0783|consensus

Probab=97.09  E-value=0.0004  Score=72.59  Aligned_cols=66  Identities=23%  Similarity=0.254  Sum_probs=58.1

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDP-LGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~-~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .++.|+..|..+.++.||++     |+|++.+|+ .|+||||-|+..||.|++-+|+++|+...       .||..-++
T Consensus        55 alH~~~S~~k~~~l~wLlqh-----Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen   55 ALHIAVSENKNSFLRWLLQH-----GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             eeeeeeccchhHHHHHHHhc-----CceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence            36669999999999999997     999999996 69999999999999999999999997663       77776555

>KOG0705|consensus

Probab=97.02  E-value=0.001  Score=67.04  Aligned_cols=59  Identities=22%  Similarity=0.314  Sum_probs=54.6

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK  105 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~  105 (377)
                      +.|+.||+.|++...+.|+=.     |+|+-.+|.+|+|||.||-+.|..+++.+|+.+|+..+
T Consensus       663 t~LHLa~~~gnVvl~QLLiWy-----g~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e  721 (749)
T KOG0705|consen  663 TALHLAARKGNVVLAQLLIWY-----GVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE  721 (749)
T ss_pred             chhhhhhhhcchhHHHHHHHh-----CccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence            457789999999999999875     99999999999999999999999999999999998765

>KOG2301|consensus

Probab=96.98  E-value=0.0045  Score=70.67  Aligned_cols=125  Identities=17%  Similarity=0.233  Sum_probs=103.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Q psy7030         187 SYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNA  266 (377)
Q Consensus       187 ~~~e~~~~~~~~~~~~~Ei~~~~~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~  266 (377)
                      .++.++-.+++..+..|++-++..-|++.||++.||.+|++...+.++..++......                      
T Consensus      1187 ~~l~~in~vft~~Ft~E~vLKiiA~~~~~yf~~~WN~FDfvvvIlSIv~~~ls~~~~~---------------------- 1244 (1592)
T KOG2301|consen 1187 AILTILNAVFIVLFTIECILKVIALRFRGYFTSAWNVFDFVVTILSIVGIVLSEAVEK---------------------- 1244 (1592)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhHhccccchheEeeeeeHhHHHHHHHHHHHh----------------------
Confidence            3455677888888999999999999999999999999999998888888776654321                      


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy7030         267 FDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWY  336 (377)
Q Consensus       267 ~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~~  336 (377)
                         ...+...+.+.-++--.|++++++..+.+-.+..++-..+..+....+.++++++-||+.--++|..
T Consensus      1245 ---~~~~~~~~~~~rl~rV~R~l~Li~~~~~ir~LL~t~~~Sl~al~~i~lLl~ll~fiYAi~Gmq~Fg~ 1311 (1592)
T KOG2301|consen 1245 ---YESSPTLLRFLRLFRVGRFLRLIPQAKTIRTLLLTLMMSLPALFFIILLLFLLFFIYAIIGMQLFGY 1311 (1592)
T ss_pred             ---hccchhhHHHHHHHHHHHHHHhccccchhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence               0112346777777888899999999999999888888888999999999999999999998888874

>smart00248 ANK ankyrin repeats

Probab=96.94  E-value=0.0015  Score=37.67  Aligned_cols=28  Identities=43%  Similarity=0.585  Sum_probs=21.7

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCc
Q psy7030          77 LGRSALTLAIEGENLEMTELLIVMGVEP  104 (377)
Q Consensus        77 ~G~TpLh~A~~~g~~~iv~~Ll~~ga~i  104 (377)
                      .|.||+|+|+..++.++++.|+++|.++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            3678888888888888888888877654

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG0522|consensus

Probab=96.90  E-value=0.0013  Score=65.85  Aligned_cols=131  Identities=15%  Similarity=0.097  Sum_probs=85.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcChHHHHHHhcCCHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAV  120 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~tpLh~A~~~g~~eiv  120 (377)
                      ++.+|.|+..||.++++.|+..     |+|+..+|+.|++|||-|+..|+.+++.-++.+--.-.   -.-...+.+.++
T Consensus        56 ~TpLhlAV~Lg~~~~a~~Ll~a-----~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~~~q~---~~~~~~~~p~ll  127 (560)
T KOG0522|consen   56 RTPLHLAVRLGHVEAARILLSA-----GADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHLKYQA---WEKWERRLPRLL  127 (560)
T ss_pred             CccHHHHHHhcCHHHHHHHHhc-----CCCccccccccccHHHHHHHcCCHHHHHHHHHHhHHHH---HHHHHhcchHHH
Confidence            5568889999999999999997     99999999999999999999999998877776521100   001124566677


Q ss_pred             HHHHhcCCccCC-CCCCCCCCCC-ccccccChHHHHHhhhhhhHHHHHHhhcccc-----cceeee
Q psy7030         121 ELLLEYEEIVHK-EGEPYLSRKP-PKSCQNTAYRILLLLVSQRADVILLEYLGVT-----DNHITG  179 (377)
Q Consensus       121 ~~Ll~~~~~~~~-~~~~~~~t~l-h~ac~~n~~~~l~~L~s~~~~~~ll~y~~~p-----~~fiF~  179 (377)
                      +.|.+.+..-.. .-+...|-|| .-.|-++.|++-..=.+-.+++.|+.|.+.-     .+|||.
T Consensus       128 ~~l~~~~DFYmE~~wdF~SWvPlvSrI~PSD~~kIyK~G~~lR~DTTL~gF~~m~wqRGd~SFlF~  193 (560)
T KOG0522|consen  128 AKLSEMPDFYMEMKWDFQSWIPLLSRILPSDTCKIYKRGSSLRADTTLAGFEGMKWQRGDQSFLFR  193 (560)
T ss_pred             HHHHhCccceEEEEecceeehhhhhccCchhhHHHhhcccceeeeeeeecCCCceEEecceEEEEe
Confidence            777766543321 1112234443 2256666666554333444566666655543     567773

>KOG3609|consensus

Probab=96.87  E-value=0.0018  Score=68.24  Aligned_cols=78  Identities=19%  Similarity=0.131  Sum_probs=57.1

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCC----ccc-ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcChHHHHHHhcC
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHI----DIN-CVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSE  115 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~----dvn-~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~tpLh~A~~~g  115 (377)
                      ...+++|+..|..+.|+.+|.......+.    |.+ ..-+.+.|||++||..+|.||+++|+++|+.+.-|  +.+..+
T Consensus        89 gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P--H~~~C~  166 (822)
T KOG3609|consen   89 GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP--HDIRCE  166 (822)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC--cccccC
Confidence            66799999999999999999873211111    111 23356899999999999999999999999987544  334445


Q ss_pred             CHHHH
Q psy7030         116 FVEAV  120 (377)
Q Consensus       116 ~~eiv  120 (377)
                      ..+|+
T Consensus       167 C~~C~  171 (822)
T KOG3609|consen  167 CKTCK  171 (822)
T ss_pred             chHhh
Confidence            55554

>KOG0520|consensus

Probab=96.54  E-value=0.00072  Score=72.53  Aligned_cols=59  Identities=22%  Similarity=0.185  Sum_probs=50.1

Q ss_pred             CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------------hHHHHHHhcCCHHHHHHHHh
Q psy7030          67 HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------------DALLQAINSEFVEAVELLLE  125 (377)
Q Consensus        67 ~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------------tpLh~A~~~g~~eiv~~Ll~  125 (377)
                      +|..++.+|..||||||+|+..||..++..|++-|++.+             |+-.+|..+|+..+..+|-+
T Consensus       630 ~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse  701 (975)
T KOG0520|consen  630 DGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE  701 (975)
T ss_pred             cccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence            688889999999999999999999999999998776553             88888888888888777654

>KOG2384|consensus

Probab=95.98  E-value=0.015  Score=51.29  Aligned_cols=56  Identities=18%  Similarity=0.150  Sum_probs=51.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCC-CcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHH-IDINCVDPLGRSALTLAIEGENLEMTELLIVMGVE  103 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g-~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~  103 (377)
                      .++.|+..|+.+.+..|+++     | +++.+.|+.|.+++.+|-++|+.+.++.|-+...+
T Consensus        15 almcaa~eg~~eavsyllgr-----g~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen   15 ALMCAAMEGSNEAVSYLLGR-----GVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             HHHHHhhhcchhHHHHHhcc-----CcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            57889999999999999998     8 99999999999999999999999999999886433

>KOG0520|consensus

Probab=95.74  E-value=0.0072  Score=65.12  Aligned_cols=101  Identities=18%  Similarity=-0.006  Sum_probs=72.0

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCcC-------hHHHHHHhcC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIV-MGVEPK-------DALLQAINSE  115 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~-~ga~i~-------tpLh~A~~~g  115 (377)
                      ++.++..|+...++.+++.    +|-..+..|.+|..-+|. |..+|.+.+-+++. +|..++       ||||.|+..|
T Consensus       578 lhL~a~~lyawLie~~~e~----~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G  652 (975)
T KOG0520|consen  578 LHLLAELLYAWLIEKVIEW----AGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRG  652 (975)
T ss_pred             HHHHHHHhHHHHHHHHhcc----cccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhcC
Confidence            4568888888888888884    244455567777777777 67777777776664 454443       9999999999


Q ss_pred             CHHHHHHHHhcCCccCCCC-----CCCCCCCCccccccC
Q psy7030         116 FVEAVELLLEYEEIVHKEG-----EPYLSRKPPKSCQNT  149 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~-----~~~~~t~lh~ac~~n  149 (377)
                      +..++..|++.|++.....     .+.|.|+--.|-.++
T Consensus       653 ~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g  691 (975)
T KOG0520|consen  653 REKLVASLIELGADPGAVTDPSPETPGGKTAADLARANG  691 (975)
T ss_pred             HHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhccc
Confidence            9999999999888776333     344666555554433

>smart00248 ANK ankyrin repeats

Probab=95.38  E-value=0.024  Score=32.33  Aligned_cols=27  Identities=26%  Similarity=0.315  Sum_probs=24.1

Q ss_pred             ChHHHHHHhcCCHHHHHHHHhcCCccC
Q psy7030         105 KDALLQAINSEFVEAVELLLEYEEIVH  131 (377)
Q Consensus       105 ~tpLh~A~~~g~~eiv~~Ll~~~~~~~  131 (377)
                      .||+|.|+..++.++++.|++++.+++
T Consensus         3 ~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        3 RTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            389999999999999999999987653

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505|consensus

Probab=94.86  E-value=0.044  Score=54.84  Aligned_cols=56  Identities=14%  Similarity=-0.089  Sum_probs=47.6

Q ss_pred             CHHHHHHHHhCCCCcC-------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCcccc
Q psy7030          90 NLEMTELLIVMGVEPK-------------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSC  146 (377)
Q Consensus        90 ~~~iv~~Ll~~ga~i~-------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac  146 (377)
                      -...++.|.++++++|             |+||+|+..|..++|.+||+.|+|...++ ..|.||-..+.
T Consensus       403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd-~~Grtpy~ls~  471 (591)
T KOG2505|consen  403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKD-GAGRTPYSLSA  471 (591)
T ss_pred             chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcc-cCCCCcccccc
Confidence            3678899999998885             99999999999999999999998886543 78888877765

>KOG3733|consensus

Probab=93.18  E-value=0.4  Score=47.33  Aligned_cols=103  Identities=9%  Similarity=0.198  Sum_probs=80.1

Q ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCChHHHHHHHHHHHHHHHHHHHHHhHccCC
Q psy7030         217 LKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQLIAEGLFAGANVFSALKLVHLFSINP  296 (377)
Q Consensus       217 ~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~l~a~~~~l~~lrll~~~~~~~  296 (377)
                      |-..|-|+=++...+.+++.++.+-.-...-.              .|      -+-.++++.+.++.|+..++|+.+++
T Consensus       339 fvn~wyi~ii~~dvl~i~gs~~k~~iE~K~l~--------------~y------DvCSI~LGtstLLVW~GVIRYLgfF~  398 (566)
T KOG3733|consen  339 FVNGWYIMIIFSDVLTIIGSILKEQIEAKYLV--------------SY------DVCSILLGTSTLLVWFGVIRYLGFFK  398 (566)
T ss_pred             EEeeeeEEeeehhHHHHHHHHHHHHHHHHhhh--------------HH------HHHHHHhCcchhHHHHHHHHHHHHHH
Confidence            34577777677777777776655422110000              01      02235889999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q psy7030         297 HLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWYFTE  339 (377)
Q Consensus       297 ~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~~y~~  339 (377)
                      .-..++.++++..-.++||...-+++.+||.++=+..+.||-.
T Consensus       399 ~YNvlIlTl~~alPkVlRFc~ca~mIYlGy~FCGWIVLGPYHd  441 (566)
T KOG3733|consen  399 TYNVLILTLKKALPKVLRFCCCAAMIYLGYCFCGWIVLGPYHD  441 (566)
T ss_pred             hhhHHHHHHHhhhHHHHHHHHHHHHHHHHHhheeeEEecchHH
Confidence            9999999999999999999999999999999999999999865

>KOG2302|consensus

Probab=92.96  E-value=1.6  Score=47.54  Aligned_cols=114  Identities=20%  Similarity=0.173  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHHHHHcC----ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCChH
Q psy7030         195 LYVAGYIWEETCEVWKDG----LYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNAFDPQ  270 (377)
Q Consensus       195 ~~~~~~~~~Ei~~~~~~g----~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  270 (377)
                      ++...++.|-.-++..-|    =..|++|.||.+|-+..+..++-|.+-.....                          
T Consensus      1164 IFtaIfV~Em~lKVVALGl~fge~aYl~ssWN~LDgflv~vsviDilvs~asa~-------------------------- 1217 (1956)
T KOG2302|consen 1164 IFTAIFVVEMTLKVVALGLYFGEQAYLRSSWNVLDGFLVAVSVIDILVSQASAG-------------------------- 1217 (1956)
T ss_pred             HHHHHHHHHHHHHHHhhhhccchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhh--------------------------
Confidence            444445555555565444    36999999999998777666655544332210                          


Q ss_pred             HHHHHHH--HHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy7030         271 LIAEGLF--AGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLW  335 (377)
Q Consensus       271 ~~~~~l~--a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~  335 (377)
                       .++++.  -..=.+-.+|-|+.++.-+.+--.+-++....+.+.-.++|.+.+++=|+.-.-+||.
T Consensus      1218 -g~kILgVlrvLRlLRtlRpLRviSra~glklVveTL~sSLkpIgnIvliccaffiiFgilgvqLFk 1283 (1956)
T KOG2302|consen 1218 -GAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFK 1283 (1956)
T ss_pred             -hHHHHHHHHHHHHHHHhhHHHHHhhcccHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence             111111  1111223333344444444444455566666778888888888888888877777776

>KOG2301|consensus

Probab=92.90  E-value=1.7  Score=50.39  Aligned_cols=120  Identities=18%  Similarity=0.316  Sum_probs=95.2

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q psy7030         185 APSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHW  264 (377)
Q Consensus       185 ~~~~~e~~~~~~~~~~~~~Ei~~~~~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w  264 (377)
                      ...++++.=.++...+++|-+-++...|...|+++.||++|++.+..+++.++......                     
T Consensus       870 ~~~~L~y~D~~Ft~iFt~Em~lK~ia~Gf~~y~rn~w~~lDf~Vv~vslisl~~~~~~~---------------------  928 (1592)
T KOG2301|consen  870 INGILEYADYIFTYIFTFEMLLKWIAYGFFFYFRNAWNWLDFVVVIVSLISLIASLKIL---------------------  928 (1592)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhHHhhhhHHHhhhHHHHHHHhhhhh---------------------
Confidence            45678888888888899999999999998889999999999998888777766554300                     


Q ss_pred             ccCChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy7030         265 NAFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLW  335 (377)
Q Consensus       265 ~~~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~  335 (377)
                                ...-..-.+--+|-|+-+...+.+...+..+...++.++--+++.+++++-||+---+||.
T Consensus       929 ----------~~ik~lr~lRaLRPLR~i~r~~~mr~Vv~~l~~a~~~I~nv~lV~li~~fiFai~gv~lF~  989 (1592)
T KOG2301|consen  929 ----------SLIKSLRILRALRPLRALSRFPGMRVVVLALFGGLPEIFNVLLVCLIFWFIFAIMGVQLFA  989 (1592)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence                      0222223345567777788888899999999999999999999999999999987777775

>KOG3713|consensus

Probab=92.33  E-value=3.6  Score=41.64  Aligned_cols=120  Identities=18%  Similarity=0.231  Sum_probs=71.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHH-HcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q psy7030         187 SYLEYLVLLYVAGYIWEETCEVW-KDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWN  265 (377)
Q Consensus       187 ~~~e~~~~~~~~~~~~~Ei~~~~-~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~  265 (377)
                      .+.|.+   .++++.+|=+-.+. -....+|++++-|++|+++++=+.+...+..... ....+                
T Consensus       243 ~~vE~v---Ci~WFT~E~llR~~~~P~k~~F~k~pLNIIDllAIlPFYielll~~~~~-~~~~~----------------  302 (477)
T KOG3713|consen  243 TYVETV---CIAWFTFEYLLRFLVAPNKLEFFKSPLNIIDLLAILPFYLELLLTLFGG-ESLKE----------------  302 (477)
T ss_pred             HHHHHH---HHHHHHHHHHHHHHcCchHHHHHhCcchHHHHHHHHHHHHHHHHHHhcc-chHHH----------------
Confidence            445544   44444554443333 3334599999999999999887666655554332 11100                


Q ss_pred             cCChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7030         266 AFDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGL  330 (377)
Q Consensus       266 ~~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~  330 (377)
                          ..-+..+.=+.=++=.+|++++.|.+.-+-.+-.++++..+++.-.++.+.+-++=||.-.
T Consensus       303 ----l~~~~~vvrvlR~lRI~RI~KLaRhS~GLr~lg~Tlr~S~~ElglLllfL~~GI~iFStlv  363 (477)
T KOG3713|consen  303 ----LENAGLVVRVLRVLRILRIFKLARHSTGLRTLGLTLRRSYRELGLLLLFLAVGIVIFSTLV  363 (477)
T ss_pred             ----HhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                0001112223334455677788888888888999999999998766655555555555444

>KOG1545|consensus

Probab=90.04  E-value=2.7  Score=40.90  Aligned_cols=124  Identities=11%  Similarity=0.135  Sum_probs=67.6

Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q psy7030         182 RGLAPSYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGR  261 (377)
Q Consensus       182 ~~~~~~~~e~~~~~~~~~~~~~Ei~~~~~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~  261 (377)
                      ...|..+.|-+-++|...-++-.+.- +-.+. .++++.-|++|+++++=|.+.++.-+..--....             
T Consensus       251 f~dPFFiVEt~CIiWFtfEllvRf~a-CPsK~-~Ff~nimNiIDiVaI~PyFitlgtela~q~g~g~-------------  315 (507)
T KOG1545|consen  251 FTDPFFIVETLCIIWFTFELLVRFFA-CPSKA-TFFRNIMNIIDIVAIIPYFITLGTELAEQQGGGG-------------  315 (507)
T ss_pred             cCCchHhHHHHHHHHHhHHHHHHHhc-CccHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCCc-------------
Confidence            45567788877666765543222111 12333 8899999999999988887776655432210000             


Q ss_pred             cccccCChHHHHHHHHHHH--HHHHHH---HHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7030         262 EHWNAFDPQLIAEGLFAGA--NVFSAL---KLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGL  330 (377)
Q Consensus       262 ~~w~~~~~~~~~~~l~a~~--~~l~~l---rll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~  330 (377)
                             .   ++.-++++  =++-..   |++++-|-++-+-.+-.+++..++++.-..+.+++-++=|+.|.
T Consensus       316 -------~---gqqaMSlAILRViRLVRVFRIFKLSRHSkGLQILGqTl~aSmrElgLLIFFlfIgviLFsSav  379 (507)
T KOG1545|consen  316 -------Q---GQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVILFSSAV  379 (507)
T ss_pred             -------c---chhhhhHHHHHHHHHHHHhhheeeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcee
Confidence                   0   01122222  222223   33334444445556667888888877544444444455555554

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=89.99  E-value=0.58  Score=35.14  Aligned_cols=44  Identities=32%  Similarity=0.376  Sum_probs=20.7

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCcChHHHHHHhcCCHHHHHHHHh
Q psy7030          82 LTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLLE  125 (377)
Q Consensus        82 Lh~A~~~g~~~iv~~Ll~~ga~i~tpLh~A~~~g~~eiv~~Ll~  125 (377)
                      +..|+..|+.|+++.+++.+..-+..+..|+..-+.|+++.|++
T Consensus        10 l~~Ai~GGN~eII~~c~~~~~~~~~~l~~AI~~H~n~i~~~l~~   53 (76)
T PF11929_consen   10 LEYAIIGGNFEIINICLKKNKPDNDCLEYAIKSHNNEIADWLIE   53 (76)
T ss_pred             HHHHHhCCCHHHHHHHHHHhccHHHHHHHHHHHhhHHHHHHHHH
Confidence            44455555555555544433222244555555555555555544

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>KOG2302|consensus

Probab=88.61  E-value=1.3  Score=48.13  Aligned_cols=47  Identities=28%  Similarity=0.439  Sum_probs=37.9

Q ss_pred             HHHHHHHHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHH
Q psy7030         194 LLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRA  240 (377)
Q Consensus       194 ~~~~~~~~~~Ei~~~~~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~  240 (377)
                      +.+.+.++.|-+-++..-|.|+||+|-||-+|+.+.+|++.++.+--
T Consensus      1478 y~ft~vfV~EaV~klvafG~rrFfkdrwnqldlaivlls~mgitlee 1524 (1956)
T KOG2302|consen 1478 YRFTAVFVLEAVLKLVAFGERRFFKDRWNQLDLAIVLLSVMGITLEE 1524 (1956)
T ss_pred             eeeeehhHHHHHHHHHHHhHHHHHhhhhhhhhHHHHHHHHhcccHhh
Confidence            44555567777888888999999999999999999988887765543

>KOG2505|consensus

Probab=87.84  E-value=0.54  Score=47.32  Aligned_cols=64  Identities=11%  Similarity=0.138  Sum_probs=47.1

Q ss_pred             HHHHHHHHHhhccCCCCccc------ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHH
Q psy7030          53 TATVRKCIKRAYRNHHIDIN------CVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEA  119 (377)
Q Consensus        53 ~~~v~~LL~~~~~~~g~dvn------~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~ei  119 (377)
                      ...++.|.+.     +++.|      ..|.-..|+||+|+..|..++|..||++|+|+.       ||..++.   +.|+
T Consensus       404 p~~ie~lken-----~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdV  475 (591)
T KOG2505|consen  404 PDSIEALKEN-----LLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDV  475 (591)
T ss_pred             hhHHHHHHhc-----CCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHH
Confidence            4566666664     55554      456668899999999999999999999998874       8888876   4455


Q ss_pred             HHHHH
Q psy7030         120 VELLL  124 (377)
Q Consensus       120 v~~Ll  124 (377)
                      -...+
T Consensus       476 k~~F~  480 (591)
T KOG2505|consen  476 KSIFI  480 (591)
T ss_pred             HHHHH
Confidence            44444

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=84.86  E-value=3.8  Score=30.63  Aligned_cols=66  Identities=20%  Similarity=0.272  Sum_probs=47.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcChHHHHHHhcCCHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEA  119 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~tpLh~A~~~g~~ei  119 (377)
                      ++.+-.|+..|+.|+++.+++.     + .+      ....+..|+...+-++++.|+++- +.+.++..+....+.++
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~-----~-~~------~~~~l~~AI~~H~n~i~~~l~~~y-~~~i~~~~~~~~~N~~a   72 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKK-----N-KP------DNDCLEYAIKSHNNEIADWLIENY-NLKISISDCLKYYNLRA   72 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHH-----h-cc------HHHHHHHHHHHhhHHHHHHHHHhc-CCCcCHHHHHHHCChHh
Confidence            4567789999999999999986     2 12      146799999999999999999862 33333545555555443

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=82.03  E-value=7.8  Score=35.51  Aligned_cols=23  Identities=26%  Similarity=0.365  Sum_probs=12.6

Q ss_pred             hHHHHHHhcCCHHHHHHHHhcCC
Q psy7030         106 DALLQAINSEFVEAVELLLEYEE  128 (377)
Q Consensus       106 tpLh~A~~~g~~eiv~~Ll~~~~  128 (377)
                      |-|.-|+..++.|++..|+++|+
T Consensus       256 tMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  256 TMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             hHHHhHHhcCcHHHHHHHHHcCc
Confidence            45555555555555555555554

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=81.72  E-value=3.8  Score=37.48  Aligned_cols=57  Identities=28%  Similarity=0.367  Sum_probs=44.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCC-Ccccc---cCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHH-IDINC---VDPLGRSALTLAIEGENLEMTELLIVMGV  102 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g-~dvn~---~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga  102 (377)
                      |-+.+...-..+..+++.+|++     | +++|.   +-..|.|-|--|.+.++.+++..|+++||
T Consensus       218 dieY~LS~h~a~~kvL~~Fi~~-----Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  218 DIEYLLSEHSASYKVLEYFINR-----GLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             hHHHHHhhcCCcHHHHHHHHhc-----cccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            3344555556677778888876     4 67775   44679999999999999999999999997

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=80.15  E-value=3.8  Score=36.23  Aligned_cols=44  Identities=16%  Similarity=0.114  Sum_probs=33.6

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCcC-hHHHHHHhcCCHHHHHHHHh
Q psy7030          82 LTLAIEGENLEMTELLIVMGVEPK-DALLQAINSEFVEAVELLLE  125 (377)
Q Consensus        82 Lh~A~~~g~~~iv~~Ll~~ga~i~-tpLh~A~~~g~~eiv~~Ll~  125 (377)
                      |..|+.+|-.+-+.-.+++|.+++ ++|..|+..+|..++.+++.
T Consensus       147 l~~a~~kgll~F~letlkygg~~~~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  147 LEKAAAKGLLPFVLETLKYGGNVDIIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHCCCHHHHHHHHHcCCcccHHHHHHHHHhhHHHHHHHhhc
Confidence            456777888877777778887777 88888888888888777764

These proteins may be involved in promoting survival of infected macrophages [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	377
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-05
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-04
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-05
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-05
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-04
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-05
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-05
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-04
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-05
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	8e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	8e-04
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	9e-05
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-04
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-04
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-04
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-04
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-04
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-04
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-04
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	9e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-04
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-04
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-04
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-04
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-04
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-04
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-04
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-04
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	9e-04

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 45.9 bits (110), Expect = 1e-05
 Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 19/99 (19%)

Query: 35  TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMT 94
           TPL        L+ + G    V   +     +   + N  +  G + L L  +  ++ + 
Sbjct: 247 TPL-------HLAAQEGHAEMVALLL-----SKQANGNLGNKSGLTPLHLVAQEGHVPVA 294

Query: 95  ELLIVMG--VEPKD-----ALLQAINSEFVEAVELLLEY 126
           ++LI  G  V+         L  A +   ++ V+ LL++
Sbjct: 295 DVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH 333

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 14/109 (12%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
            ++ + N     G + L +A    ++E    L+                L  A     V 
Sbjct: 101 ENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160

Query: 119 AVELLLEYE---EIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV 164
             ELLLE +       K G   L      +  +    I+ LL+ +    
Sbjct: 161 VAELLLERDAHPNAAGKNGLTPLH----VAVHHNNLDIVKLLLPRGGSP 205

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 44.8 bits (107), Expect = 3e-05
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 14/108 (12%)

Query: 67  HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVEA 119
             I        G + L +A    +L + + L+  G      +      L  A  +   E 
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEV 62

Query: 120 VELLLEYE---EIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV 164
            + LL+ +       K+ +  L      + +     ++ LL+   A+ 
Sbjct: 63  AKYLLQNKAKVNAKAKDDQTPLHC----AARIGHTNMVKLLLENNANP 106

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 44.4 bits (106), Expect = 3e-05
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 19/98 (19%)

Query: 35  TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMT 94
           TPL        ++   G   TV   +            C+   G + L +A +   + + 
Sbjct: 115 TPL-------HIAAREGHVETVLALL-----EKEASQACMTKKGFTPLHVAAKYGKVRVA 162

Query: 95  ELLIVMG--VEPKD-----ALLQAINSEFVEAVELLLE 125
           ELL+                L  A++   ++ V+LLL 
Sbjct: 163 ELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLP 200

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 43.6 bits (104), Expect = 7e-05
 Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
            +   +N      ++ L  A    +  M +LL+                L  A     VE
Sbjct: 68  QNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVE 127

Query: 119 AVELLLEY 126
            V  LLE 
Sbjct: 128 TVLALLEK 135

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.9 bits (102), Expect = 1e-04
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP--KD-----ALLQAINSEFVE 118
                 N     G + L +A+   NL++ +LL+  G  P          L  A     VE
Sbjct: 167 ERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVE 226

Query: 119 AVELLLEY 126
               LL+Y
Sbjct: 227 VARSLLQY 234

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
            +    N     G + L LA +  + EM  LL+         +      L        V 
Sbjct: 233 QYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVP 292

Query: 119 AVELLLEYE---EIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV 164
             ++L+++    +   + G   L      +      +++  L+  +ADV
Sbjct: 293 VADVLIKHGVMVDATTRMGYTPLH----VASHYGNIKLVKFLLQHQADV 337

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.1 bits (100), Expect = 2e-04
 Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
                 N  +    + L +A    + E+ + L+     V  K       L  A       
Sbjct: 35  QRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN 94

Query: 119 AVELLLEY 126
            V+LLLE 
Sbjct: 95  MVKLLLEN 102

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 40.6 bits (96), Expect = 5e-04
 Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
                 +     G + L +A +   +E+   L+  G     +       L  A      E
Sbjct: 200 PRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAE 259

Query: 119 AVELLLEY 126
            V LLL  
Sbjct: 260 MVALLLSK 267

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 21/100 (21%)

Query: 35  TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMT 94
           TP          +  + D   + + +         D++ VD  GR+AL       + +  
Sbjct: 47  TPW-------WTAARKADEQALSQLL------EDRDVDAVDENGRTALLFVAGLGSDKCV 93

Query: 95  ELLIVMG--VEPKD------ALLQAINSEFVEAVELLLEY 126
            LL   G  ++ +D      AL  A      E VE L+E 
Sbjct: 94  RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 133

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 22/149 (14%), Positives = 49/149 (32%), Gaps = 26/149 (17%)

Query: 35  TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMT 94
           TPL       + ++E  +   +   +        + ++  +  G S L  AI     ++ 
Sbjct: 175 TPL-------MRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVA 227

Query: 95  ELLIVMG--VEPKD-----ALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQ 147
              + MG  V  +D      L  ++ +  V   + LL+  ++   +  PY +       +
Sbjct: 228 MRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDR 287

Query: 148 NTAYRILL------------LLVSQRADV 164
                 +             LL  +  +V
Sbjct: 288 VVWLDFVPAAADPSKQEVLQLLQEKLDEV 316

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 5/66 (7%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPKD-----ALLQAINSEFVEAV 120
              +     +  G +AL LA +   ++  + L  +G           +  A+ +   + V
Sbjct: 41  ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLV 100

Query: 121 ELLLEY 126
             L+E 
Sbjct: 101 VALVEG 106

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 7/67 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
              ++    D      + +A      +    LI  G     ++     AL  A     V+
Sbjct: 8   FPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVD 67

Query: 119 AVELLLE 125
             + L  
Sbjct: 68  TAKYLAS 74

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 12/73 (16%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG-------VEPKD-----ALLQAIN 113
                    D    + L  A+E  N E  +L++          ++  +      L  AI 
Sbjct: 161 QLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAIL 220

Query: 114 SEFVEAVELLLEY 126
             + +     +E 
Sbjct: 221 INWEDVAMRFVEM 233

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 18/127 (14%)

Query: 49  ERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD 106
             G+   V++ +         D +  +  G +AL  AI G N  + + LI  G  V   D
Sbjct: 30  LTGELEVVQQAV-----KEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPD 84

Query: 107 -----ALLQAINSEFVEAVELLLEY----EEIVHKEGEPYLSRKPPKSCQNTAYRILLLL 157
                 L  A +         L+++          +G     +      +         L
Sbjct: 85  SHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC--DPYREGYADCATYL 142

Query: 158 VSQRADV 164
                 +
Sbjct: 143 ADVEQSM 149

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 43.2 bits (103), Expect = 4e-05
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
           N H D+N VD LG+SAL  A    N++   +L+  G   + ++      L  A      E
Sbjct: 113 NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 172

Query: 119 AVELLLEY 126
             ++LL++
Sbjct: 173 TAKVLLDH 180

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 41.2 bits (98), Expect = 2e-04
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 7/67 (10%)

Query: 67  HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVEA 119
           +  + +  +    + L LA    + E  ++L+      +  D         A      + 
Sbjct: 147 NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI 206

Query: 120 VELLLEY 126
           V LL EY
Sbjct: 207 VRLLDEY 213

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 39.7 bits (94), Expect = 7e-04
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 67  HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG---VEPKD-----ALLQAINSEFVE 118
              D N  D +GR+ L  A+  +   + ++LI      ++ +       L+ A       
Sbjct: 47  ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 106

Query: 119 AVELLLEY 126
            +E L+  
Sbjct: 107 MLEDLINS 114

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 43.3 bits (102), Expect = 5e-05
 Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 19/137 (13%)

Query: 63  AYRNHHI-----------DINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD--- 106
           AY                     D   R+AL  A    + E+ E L+ +G  V  KD   
Sbjct: 14  AYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAG 73

Query: 107 --ALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV 164
              L  A ++   E V+ LL     V+   +         +     + I ++L+   A+ 
Sbjct: 74  WSPLHIAASAGXDEIVKALLVKGAHVNAVNQ-NGCTPLHYAASKNRHEIAVMLLEGGANP 132

Query: 165 ILLEYLGVTDNHITGQQ 181
              ++   T  H    +
Sbjct: 133 DAKDHYDATAMHRAAAK 149

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 43.6 bits (104), Expect = 6e-05
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
             +++ +  D    + L LA     + + +LL+  G  V  KD      L  A +    E
Sbjct: 46  PLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYE 105

Query: 119 AVELLLEY 126
             ELLL++
Sbjct: 106 VTELLLKH 113

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
               ++N  +    + L +A E  + ++ E+L   G  +   D     AL +A  +  ++
Sbjct: 235 RKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQ 294

Query: 119 AVELLLEY 126
              LLL Y
Sbjct: 295 TCRLLLSY 302

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 40.9 bits (97), Expect = 4e-04
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 7/73 (9%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP--KD-----ALLQAINSEFVE 118
            H   +N +D    + L  A     +E+  LL+  G +P   +     A+  A   E  E
Sbjct: 112 KHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRE 171

Query: 119 AVELLLEYEEIVH 131
            +    +   ++ 
Sbjct: 172 RLTYEFKGHSLLQ 184

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 42.4 bits (101), Expect = 8e-05
 Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 68  HIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVEAV 120
           H++        RS L  A E  ++++  +L+  G  ++         L++A  +  +EAV
Sbjct: 1   HMNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAV 60

Query: 121 ELLLE 125
           + L++
Sbjct: 61  KYLIK 65

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 42.9 bits (102), Expect = 9e-05
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 45  LLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--V 102
           L +   GDT  V + +         DIN  +  G +AL  A   +N++M + L+  G  +
Sbjct: 45  LAACSSGDTEEVLRLL-----ERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANI 99

Query: 103 EPKD-----ALLQAINSEFVEAVELLLEY 126
              D      L  A +  +++  E L+  
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQ 128

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 39.8 bits (94), Expect = 8e-04
 Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 26/99 (26%)

Query: 35  TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMT 94
             +  + +++L S                    HI+       G +AL +A      E+ 
Sbjct: 175 RIMLRDARQWLNS-------------------GHINDVRHAKSGGTALHVAAAKGYTEVL 215

Query: 95  ELLIVMG--VEPKD-----ALLQAINSEFVEAVELLLEY 126
           +LLI     V  KD      L  A +    EA  +L+E 
Sbjct: 216 KLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 42.8 bits (102), Expect = 9e-05
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG---VEPKD-----ALLQAINSEFV 117
           +H  D+N     G++ L LA+E ++L + + L+      +   D     ALL A+  +  
Sbjct: 207 DHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLK 266

Query: 118 EAVELLLE 125
           +  ELL +
Sbjct: 267 KIAELLCK 274

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
            H  D       G +   LA    ++++ +L +  G  V   D     A ++A     V+
Sbjct: 60  RHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVK 119

Query: 119 AVELLLEY 126
           A++ L + 
Sbjct: 120 ALKFLYKR 127

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 41.7 bits (99), Expect = 1e-04
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 21/100 (21%)

Query: 35  TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMT 94
           TP          +  + D   + + +         D++ VD  GR+AL       + +  
Sbjct: 46  TPW-------WTAARKADEQALSQLL------EDRDVDAVDENGRTALLFVAGLGSDKCV 92

Query: 95  ELLIVMG--VEPKD------ALLQAINSEFVEAVELLLEY 126
            LL   G  ++ +D      AL  A      E VE L+E 
Sbjct: 93  RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 132

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 16/103 (15%)

Query: 31  PNLPTPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN 90
               T L L       +V   D  ++   I      +  +++     G +AL      +N
Sbjct: 167 EPDETALHL-------AVRSVDRTSL--HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN 217

Query: 91  LEMTELLIVMGVEP-------KDALLQAINSEFVEAVELLLEY 126
            E  +LL+             +  L  A   +     ELL + 
Sbjct: 218 AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 19/114 (16%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG------VEPKD-----ALLQAINS 114
                   +D  G++A  LA E  +      L+         +E ++     AL  A+N+
Sbjct: 67  TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNT 126

Query: 115 EFVEAVELLLEY----EEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV 164
           E  E V+LLLE     + +  K G   L      + +N +  ++ LL+   A+V
Sbjct: 127 ECQETVQLLLERGADIDAVDIKSGRSPLIH----AVENNSLSMVQLLLQHGANV 176

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 40.9 bits (97), Expect = 3e-04
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 8/86 (9%)

Query: 48  VERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPK 105
           V +G+   V + +   ++    +++  + L ++ L LA+      +  LL+  G      
Sbjct: 17  VVQGNLPAVHRLVNL-FQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMAL 75

Query: 106 D-----ALLQAINSEFVEAVELLLEY 126
           D     A   A        +  LL+ 
Sbjct: 76  DRHGQTAAHLACEHRSPTCLRALLDS 101

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 40.4 bits (96), Expect = 2e-04
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 7/67 (10%)

Query: 67  HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVEA 119
             +  +    + R+ L +A    +  + E+L+  G  V  KD     AL  A      E 
Sbjct: 56  AGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV 115

Query: 120 VELLLEY 126
           VELL++Y
Sbjct: 116 VELLIKY 122

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 65/403 (16%), Positives = 114/403 (28%), Gaps = 117/403 (29%)

Query: 2   IVKAQFNFWFQV-------GVEIEGPGIVHTQPFDMPNLPTPLTLEEKKYLLS----VER 50
              A FN   ++        V  +      T    + +    LT +E K LL        
Sbjct: 258 AWNA-FNLSCKILLTTRFKQV-TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315

Query: 51  GDT-ATVRKC-------IKRAYRNHHIDINCVDPLGRSALTLAIEG--ENL---EMTELL 97
            D    V          I  + R+     +    +    LT  IE     L   E  ++ 
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375

Query: 98  IVMGVEPKDA-----LLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYR 152
             + V P  A     LL  I  + +++         +V+K  +  L  K PK    +   
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDV-----MVVVNKLHKYSLVEKQPKESTISIPS 430

Query: 153 ILLLLVSQRADVILLEYLGVTDNH--ITGQQRGLAPSYLEYLVLLYVAGYIWEETCEVWK 210
           I L L  +  +   L        H  I            + L+  Y+  Y          
Sbjct: 431 IYLELKVKLENEYAL--------HRSIVDHYNIPKTFDSDDLIPPYLDQYF--------- 473

Query: 211 DGLYRYL------KDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHW 264
              Y ++       +    +   R +     F+         + +I  + ++       W
Sbjct: 474 ---YSHIGHHLKNIEHPERMTLFRMVFLDFRFL---------EQKIRHDSTA-------W 514

Query: 265 NAFDPQLIAEGLFAGANVFSALKLV--HLFSINPHLGPLQISLGRMIIDIVKFFFIYTLV 322
           NA    L         N    LK    ++   +P          R++  I+ F       
Sbjct: 515 NASGSIL---------NTLQQLKFYKPYICDNDPK-------YERLVNAILDFL------ 552

Query: 323 LLSFACGLNQLLWYFTELERKDCYSTMSSTGALNPSEDPNWEE 365
                   N +   +T+L R           AL   ++  +EE
Sbjct: 553 ---PKIEENLICSKYTDLLRI----------ALMAEDEAIFEE 582

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 46  LSVERGDTATVRKCIKR-AYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--V 102
           L+ E+G  A+V    +     + H  +   +  G + L LA     L + ELL+ +G  V
Sbjct: 84  LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV 143

Query: 103 EPKD------ALLQAINSEFVEAVELLLEY 126
             ++      AL  A++ +  + V LLL+ 
Sbjct: 144 NAQEPCNGRTALHLAVDLQNPDLVSLLLKC 173

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 7/108 (6%)

Query: 70  DINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVEAVEL 122
            ++  + LG++AL LA         E L   G  V   +     AL  A          +
Sbjct: 37  YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACV 96

Query: 123 LLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILLEYL 170
           LL+      ++       +      +T++    +      +       
Sbjct: 97  LLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRD 144

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 8/69 (11%)

Query: 66  NHHIDINCVDP-LGRSALTLAIEGENLEMTELLIVMGVEP--KD-----ALLQAINSEFV 117
           +   D+N  +P  GR+ L LA+E +   + ELL+  G +P  +       L  A+     
Sbjct: 179 DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP 238

Query: 118 EAVELLLEY 126
               LL  +
Sbjct: 239 ILARLLRAH 247

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 11/70 (15%), Positives = 20/70 (28%), Gaps = 7/70 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
               D       GR+ L  A+   N  +  LL   G                + +    +
Sbjct: 213 KAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSD 272

Query: 119 AVELLLEYEE 128
             +   EY++
Sbjct: 273 NRDEGDEYDD 282

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 40.8 bits (97), Expect = 2e-04
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 67  HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVEA 119
           H  ++N  +  G + L +A +    E+ + L+ +G  +  +D     A   A      E 
Sbjct: 123 HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV 182

Query: 120 VELLLEY 126
           +++  E 
Sbjct: 183 IKIFTEV 189

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 40.5 bits (96), Expect = 3e-04
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
           +   ++N  D  G++ L  +I     EM+  L+  G  V  ++      L+ A      E
Sbjct: 89  SKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSE 148

Query: 119 AVELLLEY 126
            V+ LLE 
Sbjct: 149 IVKKLLEL 156

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 38.9 bits (92), Expect = 9e-04
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 7/67 (10%)

Query: 67  HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVEA 119
           +   +   D  G +AL  A++   L + E L+  G  V  KD      L+ +I   + E 
Sbjct: 57  NFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEM 116

Query: 120 VELLLEY 126
              LLE+
Sbjct: 117 SYFLLEH 123

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 41.3 bits (98), Expect = 2e-04
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
           N H D+N VD LG+SAL  A    N++   +L+  G   + ++      L  A      E
Sbjct: 145 NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 204

Query: 119 AVELLLEY 126
             ++LL++
Sbjct: 205 TAKVLLDH 212

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 39.7 bits (94), Expect = 2e-04
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 67  HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVEA 119
           +  D+N  D  G + L LA    +LE+ E+L+  G  V   D      L  A     +E 
Sbjct: 36  NGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEI 95

Query: 120 VELLLEY 126
            E+LL++
Sbjct: 96  AEVLLKH 102

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 70  DINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD---ALLQAINSEFVEAVELLL 124
           D    D  G SA   AI   N+ +   L+  G      +    L QA   E  + V++LL
Sbjct: 23  DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILL 82

Query: 125 E 125
            
Sbjct: 83  F 83

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 40.6 bits (96), Expect = 5e-04
 Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 66  NHHIDINCVDPLGRS-ALTLAIEGENLEMTELLIVMGVEPKDALLQAINSEFVEAVELLL 124
           ++    N  + L     + LAI+ +++EM + L    +    A L+ +  +  E  ++++
Sbjct: 182 DYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANLENVLLDDAEIAKMII 241

Query: 125 EY 126
           E 
Sbjct: 242 EK 243

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 27/154 (17%), Positives = 56/154 (36%), Gaps = 27/154 (17%)

Query: 35  TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMT 94
            PL         + +RG+ + +R+C+      + + +N +D  G +AL  A  G + ++ 
Sbjct: 75  NPL-------HEAAKRGNLSWLRECLD-----NRVGVNGLDKAGSTALYWACHGGHKDIV 122

Query: 95  ELLIVMG---VEPKD-----ALLQAINSEFVEAVELLLEYE---EIVHKEGEPYLSRKPP 143
           E+L       +  ++     AL  A    + + V+LLL      ++ + E +        
Sbjct: 123 EMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDM--- 179

Query: 144 KSCQNTAYRILLLLVSQRADVILLEYLGVTDNHI 177
            +       +L       A   L       D+  
Sbjct: 180 -ATNAACASLLKKKQGTDAVRTLSNAEDYLDDED 212

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 41.1 bits (96), Expect = 4e-04
 Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 7/66 (10%)

Query: 67  HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP-------KDALLQAINSEFVEA 119
           +   ++     G +AL  A      +  +LL+             + AL  A      E 
Sbjct: 215 NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKEC 274

Query: 120 VELLLE 125
            ELL +
Sbjct: 275 EELLEQ 280

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 39.7 bits (94), Expect = 4e-04
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 8/68 (11%)

Query: 67  HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG---VEPKD-----ALLQAINSEFVE 118
              D+N  D  G   L LA +  +L + E L+      V  ++     A   A      E
Sbjct: 92  FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE 151

Query: 119 AVELLLEY 126
            V L+   
Sbjct: 152 VVSLMQAN 159

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 39.7 bits (94), Expect = 4e-04
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
            H  D++  D  G   L  A    + E+ ELL+  G  V   D      L +A      E
Sbjct: 63  QHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYE 122

Query: 119 AVELLLEY 126
             +LLL++
Sbjct: 123 ICKLLLQH 130

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 40.2 bits (95), Expect = 5e-04
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
           +    +N +     S L  A  G +L   ++L+  G  V          L  A  S   +
Sbjct: 80  SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD 139

Query: 119 AVELLLEY 126
            V LLL++
Sbjct: 140 CVNLLLQH 147

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 39.4 bits (93), Expect = 8e-04
 Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 66  NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG--VEPKD-----ALLQAINSEFVE 118
           +    ++ VD  G + L +A+   ++E+ + LI  G  +  ++       L A      E
Sbjct: 27  DTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTE 86

Query: 119 AVELLLEY 126
            +  +L++
Sbjct: 87  ILAYMLKH 94

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	377
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.88
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.85
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.85
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.81
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.81
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.81
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.81
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.81
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.8
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.8
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.8
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.79
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.79
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.79
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.78
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.78
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.78
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.78
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.78
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.78
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.77
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.77
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.77
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.77
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.76
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.76
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.76
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.75
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.75
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.75
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.75
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.75
2rfa_A	232	Transient receptor potential cation channel subfa	99.74
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.74
2etb_A	256	Transient receptor potential cation channel subfam	99.74
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.74
2pnn_A	273	Transient receptor potential cation channel subfa	99.73
2rfa_A	232	Transient receptor potential cation channel subfa	99.73
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.73
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.73
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.73
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.72
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.72
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.72
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.72
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.72
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.72
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.72
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.72
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.72
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.72
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.72
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.72
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.72
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.71
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.71
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.71
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.71
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.71
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.71
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.71
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.7
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.7
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.7
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.7
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.7
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.69
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.69
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.69
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.69
2etb_A	256	Transient receptor potential cation channel subfam	99.69
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.68
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.68
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.68
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.68
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.68
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.67
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.66
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.66
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.66
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.66
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.66
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.66
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.66
2pnn_A	273	Transient receptor potential cation channel subfa	99.65
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.65
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.65
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.64
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.64
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.62
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.62
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.61
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.61
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.61
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.61
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.61
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.59
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.58
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.58
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.58
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.57
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.57
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.56
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.56
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.53
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.53
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.52
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.5
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.5
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.5
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.46
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.41
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.4
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.33
3rvy_A	285	ION transport protein; tetrameric ION channel, vol	97.94
4dxw_A	229	Navrh, ION transport protein; tetrameric, voltage-	97.65
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	96.82
3beh_A	355	MLL3241 protein; transmembrane protein, membrane p	95.28
1orq_C	223	Potassium channel; voltage-dependent, KVAP, FAB co	88.44
1ors_C	132	Potassium channel; voltage-dependent, voltage sens	83.73

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.88  E-value=1.2e-22  Score=177.40  Aligned_cols=121  Identities=26%  Similarity=0.333  Sum_probs=105.7

Q ss_pred             CCHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHH
Q psy7030          37 LTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALL  109 (377)
Q Consensus        37 l~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh  109 (377)
                      +++..++|+.||++|+.++|+.||+.     |+|+|.+|.+|+||||+|+..++.++++.|+++|++++       ||||
T Consensus         1 ~sdlg~~L~~Aa~~G~~~~v~~Ll~~-----Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh   75 (169)
T 4gpm_A            1 MSELGKRLIEAAENGNKDRVKDLIEN-----GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLH   75 (169)
T ss_dssp             -CHHHHHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             CCHHHHHHHHHHHcCCHHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHH
Confidence            35677899999999999999999997     99999999999999999999999999999999998876       8999


Q ss_pred             HHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         110 QAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       110 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      +|+..|+.+++++|+++|+++|..+ ..|+||||+||..++.+++..|.++|++
T Consensus        76 ~A~~~g~~~~v~~Ll~~gadvn~~d-~~G~TpLh~A~~~g~~~~v~~Ll~~gad  128 (169)
T 4gpm_A           76 HAAENGHKEVVKLLISKGADVNAKD-SDGRTPLHHAAENGHKEVVKLLISKGAD  128 (169)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HHHHcCCHHHHHHHHHCcCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999999999999999888654 7888999999998888888777766654

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.85  E-value=2.1e-21  Score=169.36  Aligned_cols=117  Identities=23%  Similarity=0.243  Sum_probs=107.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+|+|.+|.+|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        39 t~l~~a~~~~~~~~~~~ll~~-----gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~  113 (169)
T 4gpm_A           39 TPLHHAAENGHKEVVKLLISK-----GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN  113 (169)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CHHHHHHHcCCHHHHHHHHhc-----ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence            357789999999999999997     99999999999999999999999999999999999986       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      |+.+++++|+++|++++..+ ..|+||||+||..++.+++..|.++|++.
T Consensus       114 g~~~~v~~Ll~~gad~~~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i  162 (169)
T 4gpm_A          114 GHKEVVKLLISKGADVNTSD-SDGRTPLDLAREHGNEEVVKLLEKQGGWL  162 (169)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred             CCHHHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence            99999999999999998764 88999999999999999998888888764

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.85  E-value=4.2e-21  Score=160.24  Aligned_cols=120  Identities=23%  Similarity=0.205  Sum_probs=109.3

Q ss_pred             CCCCHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hH
Q psy7030          35 TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DA  107 (377)
Q Consensus        35 ~~l~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tp  107 (377)
                      ++-....+.++.||+.|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||
T Consensus         9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~   83 (136)
T 2jab_A            9 HHGSDLGKKLLEAARAGQDDEVRILMAN-----GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTP   83 (136)
T ss_dssp             ---CHHHHHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred             cccccccHHHHHHHHhCCHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCH
Confidence            3456678899999999999999999997     99999999999999999999999999999999999886       99


Q ss_pred             HHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         108 LLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       108 Lh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      ||+|+..|+.+++++|+++|++++..+ ..|.||+|.|+..++.+++..|.+.
T Consensus        84 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpl~~A~~~~~~~~~~~Ll~~  135 (136)
T 2jab_A           84 LHLAAFIGHLEIAEVLLKHGADVNAQD-KFGKTAFDISIGNGNEDLAEILQKL  135 (136)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCcCcC-CCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            999999999999999999999998754 8899999999999999999776654

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.81  E-value=8e-20  Score=149.60  Aligned_cols=107  Identities=23%  Similarity=0.313  Sum_probs=98.5

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAI  112 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~  112 (377)
                      .++.++.|+..|+.+.++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+
T Consensus         7 ~~~~l~~A~~~~~~~~v~~ll~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~   81 (123)
T 3aaa_C            7 CDKEFMWALKNGDLDEVKDYVAK-----GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV   81 (123)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHT-----TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred             cchHHHHHHHcCCHHHHHHHHHc-----CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence            46789999999999999999997     99999999999999999999999999999999999886       9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYR  152 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~  152 (377)
                      ..|+.+++++|+++|++++..+ ..|.||+|+|+..+..+
T Consensus        82 ~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~~~~~~  120 (123)
T 3aaa_C           82 YEGHVSCVKLLLSKGADKTVKG-PDGLTAFEATDNQAIKA  120 (123)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHCCCHHHHH
T ss_pred             HcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHhCCHHHHH
Confidence            9999999999999999998754 88999999996654443

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.81  E-value=2e-19  Score=164.12  Aligned_cols=124  Identities=17%  Similarity=0.108  Sum_probs=115.2

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAI  112 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~  112 (377)
                      ..+.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+
T Consensus        21 ~~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~   95 (229)
T 2vge_A           21 PLVLLLDAALTGELEVVQQAVKE-----MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAA   95 (229)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHH-----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             hhHHHHHHHHcCCHHHHHHHHhc-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence            35678999999999999999998     99999999999999999999999999999999999886       9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccc--cccChHHHHHhhhhhhHHHHHHh
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKS--CQNTAYRILLLLVSQRADVILLE  168 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~a--c~~n~~~~l~~L~s~~~~~~ll~  168 (377)
                      ..|+.+++++|+++|++++..++..|.||||+|  +..++.+++..|.+.|++....+
T Consensus        96 ~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~  153 (229)
T 2vge_A           96 SCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN  153 (229)
T ss_dssp             HTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSG
T ss_pred             HcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccccc
Confidence            999999999999999999987667999999999  89999999988888888876643

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.81  E-value=1.5e-20  Score=156.82  Aligned_cols=115  Identities=17%  Similarity=0.265  Sum_probs=106.2

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A~  112 (377)
                      .+.++.|++.|+.++++.|++.     |+++|.+|..|+||||+|+. |+.+++++|+++|++++        ||||+|+
T Consensus        13 ~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~   86 (136)
T 1d9s_A           13 DAGLATAAARGQVETVRQLLEA-----GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAA   86 (136)
T ss_dssp             SCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHHc-----CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHH
Confidence            3468889999999999999997     99999999999999999999 99999999999998864        9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      ..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++..|.++|+
T Consensus        87 ~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~~~~~Ll~~Ga  135 (136)
T 1d9s_A           87 REGFLDTLVVLHRAGARLDVCD-AWGRLPVDLAEEQGHRDIARYLHAATG  135 (136)
T ss_dssp             HHTCHHHHHHHHHTCCCCCCCS-SSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred             HcCCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            9999999999999999998764 789999999999999999988777664

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.81  E-value=1.1e-19  Score=157.02  Aligned_cols=119  Identities=25%  Similarity=0.224  Sum_probs=109.4

Q ss_pred             HhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHH
Q psy7030          39 LEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQA  111 (377)
Q Consensus        39 ~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A  111 (377)
                      ...+.++.||+.|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|
T Consensus        13 ~~~~~l~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A   87 (169)
T 2y1l_E           13 DLGKKLLEAARAGRDDEVRILMAN-----GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLA   87 (169)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             cccchHHHHHHcCCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence            356789999999999999999997     99999999999999999999999999999999998875       999999


Q ss_pred             HhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         112 INSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      +..|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++++
T Consensus        88 ~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  138 (169)
T 2y1l_E           88 ALFGHLEIVEVLLKNGADVNAND-MEGHTPLHLAAMFGHLEIVEVLLKNGAD  138 (169)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            99999999999999999998754 7899999999999999999777766654

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.81  E-value=1.2e-19  Score=151.15  Aligned_cols=113  Identities=22%  Similarity=0.233  Sum_probs=102.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        12 t~L~~A~~~~~~~~~~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~   86 (137)
T 3c5r_A           12 TLLHIASIKGDIPSVEYLLQN-----GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKN   86 (137)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-----TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHT
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-----CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHc
Confidence            467889999999999999997     99999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      |+.+++++|+++|++++..+ ..|.||+|+|+..+..+.+.+|.+.
T Consensus        87 ~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~A~~~~~~~~l~~l~~~  131 (137)
T 3c5r_A           87 GHVDIVKLLLSYGASRNAVN-IFGLRPVDYTDDESMKSLLLLPEKN  131 (137)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCGGGGCCCHHHHHHHSCC---
T ss_pred             CCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHhhccHHHHHhhcccc
Confidence            99999999999999998764 8899999999998888877665544

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.80  E-value=1.7e-19  Score=146.73  Aligned_cols=115  Identities=25%  Similarity=0.316  Sum_probs=106.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|++.|+.++++.|++.     |++++.+|..|.||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus         4 t~L~~A~~~~~~~~v~~Ll~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~   78 (126)
T 1n0r_A            4 TPLHLAARNGHLEVVKLLLEA-----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN   78 (126)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHH-----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             cHHHHHHHcCcHHHHHHHHHc-----CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHc
Confidence            457889999999999999998     99999999999999999999999999999999998875       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      |+.+++++|+++|++++..+ ..|.||+|+|+..++.+++..|.++|+
T Consensus        79 ~~~~~~~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~Ga  125 (126)
T 1n0r_A           79 GHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNGHLEVVKLLLEAGA  125 (126)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred             ChHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence            99999999999999998654 789999999999999999988877664

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.80  E-value=3.3e-20  Score=158.42  Aligned_cols=119  Identities=14%  Similarity=0.180  Sum_probs=106.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------h-HHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------D-ALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------t-pLh~A~  112 (377)
                      .+.|+.|+..|+.++++.|++.     |+++|.+|..|+||||+|+ .|+.+++++|+++|++++       | |||+|+
T Consensus        13 ~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~   86 (156)
T 1bi7_B           13 ADWLATAAARGRVEEVRALLEA-----GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAA   86 (156)
T ss_dssp             TTHHHHHHHHTCHHHHHHHHTT-----TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHH
T ss_pred             hHHHHHHHHcCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence            5678999999999999999997     9999999999999999985 999999999999999886       6 999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      ..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++..|.++|++...
T Consensus        87 ~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~  139 (156)
T 1bi7_B           87 REGFLDTLVVLHRAGARLDVRD-AWGRLPVDLAEELGHRDVARYLRAAAGGTRG  139 (156)
T ss_dssp             HHTCHHHHHHHHHHTCCSSCCC-TTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred             HCCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence            9999999999999999998764 7899999999999999999888888877654

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.80  E-value=5.3e-19  Score=151.68  Aligned_cols=114  Identities=19%  Similarity=0.105  Sum_probs=98.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        44 t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  118 (165)
T 3twr_A           44 TPLHFAAGYNRVSVVEYLLQH-----GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAK  118 (165)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             CHHHHHHHcChHHHHHHHHhc-----CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHc
Confidence            457789999999999999987     99999999999999999999999999999999998886       899999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      |+.+++++|+++|++++..+ ..|.||+|+|+. ++.+++..|.++|+
T Consensus       119 ~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~a~~-~~~~i~~~L~~~gA  164 (165)
T 3twr_A          119 GKYEICKLLLQHGADPTKKN-RDGNTPLDLVKD-GDTDIQDLLRGDAA  164 (165)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred             CCHHHHHHHHHcCCCCcccC-CCCCChhHhHhc-CChHHHHHHhhccc
Confidence            99999999999999988654 789999999877 67788877765553

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.79  E-value=4.2e-19  Score=153.40  Aligned_cols=117  Identities=20%  Similarity=0.180  Sum_probs=106.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        38 t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  112 (172)
T 3v30_A           38 TPLIWASAFGEIETVRFLLEW-----GADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRG  112 (172)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHH-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-----CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            357789999999999999998     99999999999999999999999999999999998876       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      |+.+++++|+++|++++..+ ..|.||+|+|+..++.+++..|.+++.+.
T Consensus       113 ~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~~~~~~~~~~L~~~~~~~  161 (172)
T 3v30_A          113 NHVKCVEALLARGADLTTEA-DSGYTPMDLAVALGYRKVQQVIENHILKL  161 (172)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCccccC-CCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            99999999999999998754 78999999999999999998887777654

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.79  E-value=5.8e-19  Score=149.85  Aligned_cols=116  Identities=25%  Similarity=0.261  Sum_probs=93.9

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.++.|++.|+.++++.|++.     |++++ +|..|+||||+|+..|+.+++++|+++|++++       ||||+|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~Ll~~-----g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   76 (153)
T 1awc_B            3 GKKLLEAARAGQDDEVRILMAN-----GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAAS   76 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHH-----TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHc-----CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            5678888888888888888887     77776 57888888888888888888888888887775       88888888


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      .|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.++|++
T Consensus        77 ~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  125 (153)
T 1awc_B           77 EGHANIVEVLLKHGADVNAKD-MLKMTALHWATEHNHQEVVELLIKYGAD  125 (153)
T ss_dssp             HTCHHHHHHHHTTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             cChHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            888888888888888887653 6788888888888888888766655544

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.79  E-value=2.6e-19  Score=152.82  Aligned_cols=116  Identities=21%  Similarity=0.341  Sum_probs=92.6

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAI  112 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~  112 (377)
                      .++.++.|++.|+.++++.|++.     |+++|.+|..|+||||+|+. |+.+++++|+++|++++       ||||+|+
T Consensus         5 ~~~~L~~A~~~g~~~~v~~Ll~~-----~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   78 (162)
T 1ihb_A            5 WGNELASAAARGDLEQLTSLLQN-----NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAA   78 (162)
T ss_dssp             CHHHHHHHHHHTCHHHHHHHTTS-----CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             HhhHHHHHHHcCCHHHHHHHHhC-----CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence            35678888888888888888876     88888888888888888888 88888888888887765       8888888


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      ..|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++.
T Consensus        79 ~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~  127 (162)
T 1ihb_A           79 RAGFLDTLQTLLEFQADVNIED-NEGNLPLHLAAKEGHLRVVEFLVKHTA  127 (162)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred             HcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHccC
Confidence            8888888888888888877653 678888888888888888766665543

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.78  E-value=5.4e-19  Score=150.05  Aligned_cols=110  Identities=21%  Similarity=0.284  Sum_probs=102.6

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        36 t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  110 (153)
T 1awc_B           36 SPLHLAAQYGHFSTTEVLLRA-----GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEH  110 (153)
T ss_dssp             CHHHHHHHHTCHHHHHHHHTT-----TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            457889999999999999997     99999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLL  157 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L  157 (377)
                      |+.+++++|+++|++++..+ ..|.||+|.|+..++.+++..|
T Consensus       111 ~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B          111 NHQEVVELLIKYGADVHTQS-KFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHHh
Confidence            99999999999999998754 7899999999999999987554

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.78  E-value=9.2e-19  Score=150.49  Aligned_cols=115  Identities=19%  Similarity=0.217  Sum_probs=98.9

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .++.|+..|+.+.++.|++.     |.++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..|
T Consensus         6 ~L~~A~~~g~~~~v~~ll~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   80 (167)
T 3v31_A            6 SVHQLAAQGEMLYLATRIEQ-----ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKG   80 (167)
T ss_dssp             CHHHHHHTTCHHHHHHHHHH-----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             hHHHHHHCCCHHHHHHHHHc-----CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence            46679999999999999987     88899999999999999999999999999999988876       8999999999


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      +.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++.+
T Consensus        81 ~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  127 (167)
T 3v31_A           81 YTDIVKMLLDCGVDVNEYD-WNGGTPLLYAVHGNHVKCVKMLLESGAD  127 (167)
T ss_dssp             CHHHHHHHHHHTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHCCCCCCcCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999999998888653 7788999999999888888777656544

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.78  E-value=8.8e-19  Score=151.34  Aligned_cols=113  Identities=25%  Similarity=0.233  Sum_probs=105.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        49 t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~  123 (169)
T 2y1l_E           49 TPLHLAAFNGHLEIVEVLLKN-----GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMF  123 (169)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-----CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence            457889999999999999997     99999999999999999999999999999999999885       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      |+.+++++|+++|++++..+ ..|.||+|.|+..++.+++..|.+.
T Consensus       124 ~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~L~~~  168 (169)
T 2y1l_E          124 GHLEIVEVLLKNGADVNAQD-KFGKTAFDISIDNGNEDLAEILQKL  168 (169)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred             CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHhCCHHHHHHHHHc
Confidence            99999999999999998754 7899999999999999998776654

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.78  E-value=9.5e-19  Score=150.10  Aligned_cols=123  Identities=20%  Similarity=0.254  Sum_probs=111.7

Q ss_pred             CHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHH
Q psy7030          38 TLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQ  110 (377)
Q Consensus        38 ~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~  110 (377)
                      .+.++.++.|++.|+.+.++.|++.    .+.+++..|..|+||||+|+..|+.+++++|+++|++++       ||||+
T Consensus         6 ~~~~~~l~~A~~~g~~~~v~~ll~~----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~   81 (165)
T 3twr_A            6 SEADRQLLEAAKAGDVETVKKLCTV----QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHN   81 (165)
T ss_dssp             CHHHHHHHHHHHHTCHHHHHHHCCT----TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             chhhHHHHHHHHhCCHHHHHHHHHc----CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHH
Confidence            3567889999999999999999986    378889999999999999999999999999999999886       99999


Q ss_pred             HHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHH
Q psy7030         111 AINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVI  165 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~  165 (377)
                      |+..|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++++..
T Consensus        82 A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  135 (165)
T 3twr_A           82 ACSYGHYEVAELLVKHGAVVNVAD-LWKFTPLHEAAAKGKYEICKLLLQHGADPT  135 (165)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             HHHcCcHHHHHHHHhCCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence            999999999999999999998754 789999999999999999987777766543

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.78  E-value=3.8e-19  Score=151.81  Aligned_cols=115  Identities=13%  Similarity=0.076  Sum_probs=103.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .++.|+. |+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..|
T Consensus        41 ~L~~A~~-~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  114 (162)
T 1ihb_A           41 ALQVMKL-GNPEIARRLLLR-----GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG  114 (162)
T ss_dssp             HHHHCCS-SCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHc-CcHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            4666777 999999999997     99999999999999999999999999999999999886       9999999999


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      +.+++++|+++|++.....+..|.||+|+|+..++.+++..|.++|++
T Consensus       115 ~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd  162 (162)
T 1ihb_A          115 HLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG  162 (162)
T ss_dssp             CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred             CHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence            999999999999985333458899999999999999999888877753

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.78  E-value=1.4e-18  Score=151.32  Aligned_cols=114  Identities=16%  Similarity=0.042  Sum_probs=84.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..|
T Consensus        42 ~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~  116 (179)
T 3f6q_A           42 PLHWACREGRSAVVEMLIMR-----GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG  116 (179)
T ss_dssp             HHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHHcCcHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            46667777777777777776     77777777777788888887778888887777777764       7788888777


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      +.+++++|+++|++++..+ ..|.||+|.|+..++.+.+..|.+++.
T Consensus       117 ~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~A~~~~~~~~~~~L~~~g~  162 (179)
T 3f6q_A          117 QDQVAEDLVANGALVSICN-KYGEMPVDKAKAPLRELLRERAEKMGQ  162 (179)
T ss_dssp             CHHHHHHHHHTTCCSSBCC-TTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHCCCCcchhc-cCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence            7788888877777776543 677778877777776666655555443

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.77  E-value=1.4e-18  Score=151.40  Aligned_cols=118  Identities=21%  Similarity=0.203  Sum_probs=108.4

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|++.|+.+.++.||+.    .+.++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus         7 ~~l~~A~~~g~~~~v~~ll~~----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   82 (179)
T 3f6q_A            7 DDIFTQCREGNAVAVRLWLDN----TENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH   82 (179)
T ss_dssp             CCHHHHHHHTCHHHHHHHHHC----TTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHhc----CcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence            357889999999999999997    478899999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      |+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++++.
T Consensus        83 ~~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  131 (179)
T 3f6q_A           83 GHRDIVQKLLQYKADINAVN-EHGNVPLHYACFWGQDQVAEDLVANGALV  131 (179)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred             CCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence            99999999999999998764 88999999999999999998777676553

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.77  E-value=5.9e-19  Score=161.43  Aligned_cols=122  Identities=18%  Similarity=0.150  Sum_probs=111.6

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.++.|+..|+.++++.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+.
T Consensus        38 ~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~  112 (239)
T 1ycs_B           38 LALLLDSSLEGEFDLVQRIIYE-----VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAAS  112 (239)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTST-----TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHH
T ss_pred             hHHHHHHHHcCCHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence            5779999999999999999987     99999999999999999999999999999999999886       99999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccc--cccChHHHHHhhhhhhHHHHHH
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKS--CQNTAYRILLLLVSQRADVILL  167 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~a--c~~n~~~~l~~L~s~~~~~~ll  167 (377)
                      .|+.+++++|+++|++++..+...+.||+|.|  +..++.+++..|.+++.+....
T Consensus       113 ~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~  168 (239)
T 1ycs_B          113 CNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIM  168 (239)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTT
T ss_pred             cCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccc
Confidence            99999999999999999987655566999998  7778899998888888876653

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.77  E-value=1.4e-18  Score=149.35  Aligned_cols=116  Identities=19%  Similarity=0.171  Sum_probs=107.7

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        38 t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  112 (167)
T 3v31_A           38 TPLMWAAAHGQIAVVEFLLQN-----GADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHG  112 (167)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CHHHHHHHCCCHHHHHHHHHc-----CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHc
Confidence            457889999999999999997     99999999999999999999999999999999998886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      |+.+++++|+++|++++..+ ..|.||+|.|+..++.+++..|.+++.+
T Consensus       113 ~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~L~~~~~~  160 (167)
T 3v31_A          113 NHVKCVKMLLESGADPTIET-DSGYNSMDLAVALGYRSVQQVIESHLLK  160 (167)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence            99999999999999998754 8899999999999999999888776654

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.77  E-value=1.6e-18  Score=152.63  Aligned_cols=110  Identities=16%  Similarity=0.141  Sum_probs=69.4

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..|
T Consensus        71 ~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  145 (192)
T 2rfm_A           71 ALIWAVKNNRLGIAEKLLSK-----GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG  145 (192)
T ss_dssp             HHHHHHHTTCHHHHHHHHHH-----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHHHHHHC-----CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence            35556666666666666665     66666666666666666666666666666666666554       6666666666


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      +.+++++|+++|++++..+ ..|.||+|.|+..++.+++..|.
T Consensus       146 ~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~~~~~~~v~~Ll  187 (192)
T 2rfm_A          146 RSEIVKKLLELGADISARD-LTGLTAEASARIFGRQEVIKIFT  187 (192)
T ss_dssp             CHHHHHHHHHTTCCTTCBC-TTSCBHHHHHHHTTCHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHhCcHHHHHHHH
Confidence            6666666666666665443 55666666666666666664444

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.76  E-value=2.3e-18  Score=148.67  Aligned_cols=115  Identities=18%  Similarity=0.209  Sum_probs=105.7

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCc-ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHID-INCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~d-vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      .++.||..|+.+.++.|++.     |.+ +|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus         5 ~L~~A~~~g~~~~v~~ll~~-----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   79 (172)
T 3v30_A            5 SIHQLAAQGELDQLKEHLRK-----GDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG   79 (172)
T ss_dssp             CHHHHHHTTCHHHHHHHHTT-----CSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred             hHHHHHHcCCHHHHHHHHHc-----CcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHC
Confidence            47889999999999999997     655 89999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      |+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.++|++
T Consensus        80 ~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  127 (172)
T 3v30_A           80 GYTDIVGLLLERDVDINIYD-WNGGTPLLYAVRGNHVKCVEALLARGAD  127 (172)
T ss_dssp             TCHHHHHHHHTTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            99999999999999998754 8899999999999999999877766654

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.76  E-value=8.6e-19  Score=157.99  Aligned_cols=120  Identities=20%  Similarity=0.251  Sum_probs=102.6

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCcC-------hHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVM-GVEPK-------DALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~-ga~i~-------tpLh~A~  112 (377)
                      ++.|+.||..|+.++++.||+.     |+++|.+|..|+||||+|+..|+.+++++|+++ |++++       ||||+|+
T Consensus        74 ~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~  148 (222)
T 3ehr_A           74 DNPLHEAAKRGNLSWLRECLDN-----RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA  148 (222)
T ss_dssp             SCHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred             ccccccccccCcHHHHHHHHhC-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence            3579999999999999999997     999999999999999999999999999999998 98886       9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      ..|+.+++++|+++|++++..+ ..|.||+|+|+..+..+++..|..++....+
T Consensus       149 ~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~  201 (222)
T 3ehr_A          149 WKGYADIVQLLLAKGARTDLRN-IEKKLAFDMATNAACASLLKKKQGTDAVRTL  201 (222)
T ss_dssp             HHTCHHHHHHHHHHTCCSCCCC-TTSCCHHHHCCSHHHHHHHC-----------
T ss_pred             HcCCHHHHHHHHHcCCCCcccc-CCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence            9999999999999999998754 7899999999999999988777766666554

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.76  E-value=3.4e-18  Score=145.09  Aligned_cols=112  Identities=17%  Similarity=0.262  Sum_probs=81.3

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      ++.++.|++.|+.+.++.|++.    .+.++|.+|..|+||||+ +..|+.++++.|+++|++++       ||||+|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~----~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~   77 (156)
T 1bd8_A            3 GDRLSGAAARGDVQEVRRLLHR----ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAAR   77 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHT----TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             chHHHHHHHhCCHHHHHHHHHh----hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            4567777777777777777775    256777777777777777 77777777777777777664       77777777


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      .|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.
T Consensus        78 ~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll  121 (156)
T 1bd8_A           78 TGFLDTLKVLVEHGADVNVPD-GTGALPIHLAVQEGHTAVVSFLA  121 (156)
T ss_dssp             TTCHHHHHHHHHTTCCSCCCC-TTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             cCcHHHHHHHHHcCCCCCCcC-CCCCcHHHHHHHhChHHHHHHHH
Confidence            777777777777777776543 56777777777777777775554

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.75  E-value=1.3e-18  Score=153.04  Aligned_cols=116  Identities=19%  Similarity=0.178  Sum_probs=107.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |++++.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        37 t~L~~A~~~g~~~~v~~Ll~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  111 (192)
T 2rfm_A           37 TPLMVACMLGMENAIDKLVEN-----FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIF  111 (192)
T ss_dssp             CHHHHHHHHTCGGGHHHHHHH-----HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHh-----ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence            457889999999999999998     99999999999999999999999999999999998885       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      |+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++++
T Consensus       112 ~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  159 (192)
T 2rfm_A          112 GYSEMSYFLLEHGANVNDRN-LEGETPLIVASKYGRSEIVKKLLELGAD  159 (192)
T ss_dssp             TCHHHHHHHHHTTCCSSCCC-TTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            99999999999999998754 8899999999999999999777766655

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.75  E-value=3e-18  Score=145.39  Aligned_cols=110  Identities=17%  Similarity=0.141  Sum_probs=100.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++. +..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        38 t~L~~-~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  111 (156)
T 1bd8_A           38 TALQV-MMFGSTAIALELLKQ-----GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQE  111 (156)
T ss_dssp             CHHHH-SCTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred             cHHHH-HHcCCHHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHh
Confidence            34666 999999999999997     99999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVS  159 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s  159 (377)
                      |+.+++++|+++ ++++..+ ..|.||+|+|+..++.+++..|.+
T Consensus       112 ~~~~~v~~Ll~~-~~~~~~~-~~g~t~l~~A~~~~~~~~v~~Ll~  154 (156)
T 1bd8_A          112 GHTAVVSFLAAE-SDLHRRD-ARGLTPLELALQRGAQDLVDILQG  154 (156)
T ss_dssp             TCHHHHHHHHTT-SCTTCCC-TTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred             ChHHHHHHHHhc-cCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHh
Confidence            999999999999 8887654 789999999999999999866653

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.75  E-value=3.1e-18  Score=160.06  Aligned_cols=82  Identities=27%  Similarity=0.219  Sum_probs=55.4

Q ss_pred             CCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCC
Q psy7030          68 HIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSR  140 (377)
Q Consensus        68 g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t  140 (377)
                      |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..|+.+++++|+++|++++..+ ..|+|
T Consensus       142 g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d-~~G~T  220 (269)
T 4b93_B          142 NAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLN-KRQRT  220 (269)
T ss_dssp             TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCC-TTSCC
T ss_pred             CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcC-CCCCC
Confidence            66666666677777777777777777777777766664       67777777777777777777777666543 56667


Q ss_pred             CCccccccCh
Q psy7030         141 KPPKSCQNTA  150 (377)
Q Consensus       141 ~lh~ac~~n~  150 (377)
                      |||+|++++.
T Consensus       221 pL~~A~~~~~  230 (269)
T 4b93_B          221 AVDCAEQNSK  230 (269)
T ss_dssp             SGGGSCTTCH
T ss_pred             HHHHHHhCCc
Confidence            7777666543

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.75  E-value=3.5e-18  Score=157.20  Aligned_cols=119  Identities=12%  Similarity=0.065  Sum_probs=107.2

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccC--------------CCCCcHHHHHHHcCCHHHHHHHHh---CCCC
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVD--------------PLGRSALTLAIEGENLEMTELLIV---MGVE  103 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D--------------~~G~TpLh~A~~~g~~~iv~~Ll~---~ga~  103 (377)
                      .+.|+.||..|+.++++.||+.     |+|+|.+|              ..|+||||+|+..|+.+++++|++   +|++
T Consensus        94 ~t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~  168 (260)
T 3jxi_A           94 QTALHIAIERRCKHYVELLVEK-----GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD  168 (260)
T ss_dssp             BCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHhC-----CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence            3468889999999999999997     99999999              689999999999999999999999   8998


Q ss_pred             cC-------hHHHHHHhcCC---------HHHHHHHHhcCCccCC------CCCCCCCCCCccccccChHHHHHhhhhhh
Q psy7030         104 PK-------DALLQAINSEF---------VEAVELLLEYEEIVHK------EGEPYLSRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       104 i~-------tpLh~A~~~g~---------~eiv~~Ll~~~~~~~~------~~~~~~~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                      ++       ||||+|+..++         .+++++|+++|++++.      ..+..|+||||+||..++.+++..|.+++
T Consensus       169 ~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g  248 (260)
T 3jxi_A          169 LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRRE  248 (260)
T ss_dssp             TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred             CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Confidence            86       99999999888         7999999999999852      34589999999999999999998888777


Q ss_pred             HHH
Q psy7030         162 ADV  164 (377)
Q Consensus       162 ~~~  164 (377)
                      ...
T Consensus       249 ~~~  251 (260)
T 3jxi_A          249 IAD  251 (260)
T ss_dssp             HHH
T ss_pred             CCc
Confidence            653

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.74  E-value=2.8e-18  Score=155.07  Aligned_cols=120  Identities=24%  Similarity=0.262  Sum_probs=107.9

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc------------ChHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP------------KDAL  108 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i------------~tpL  108 (377)
                      ++.++.|++.|+.++++.||+.    .|+++|.+|..|+||||+|+..|+.+++++|+++|+++            .|||
T Consensus         4 ~t~L~~A~~~g~~~~v~~Ll~~----~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L   79 (232)
T 2rfa_A            4 ESPLLLAAKENDVQALSKLLKF----EGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL   79 (232)
T ss_dssp             TCHHHHHHHTTCHHHHHHHHTT----TCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHh----cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence            3568889999999999999986    49999999999999999999999999999999998765            1999


Q ss_pred             HHHHhcCCHHHHHHHHhcCCccCCCCC------------CCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         109 LQAINSEFVEAVELLLEYEEIVHKEGE------------PYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       109 h~A~~~g~~eiv~~Ll~~~~~~~~~~~------------~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      |+|+..|+.+++++|+++|++++..+.            ..|.||||.||..++.+++..|.++|++.
T Consensus        80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~  147 (232)
T 2rfa_A           80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI  147 (232)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred             HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            999999999999999999999986542            26999999999999999998887777653

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.74  E-value=5.3e-18  Score=155.81  Aligned_cols=118  Identities=11%  Similarity=0.080  Sum_probs=107.5

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCC-------------CCcHHHHHHHcCCHHHHHHHHh---CCCCc
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPL-------------GRSALTLAIEGENLEMTELLIV---MGVEP  104 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~-------------G~TpLh~A~~~g~~~iv~~Ll~---~ga~i  104 (377)
                      .+.++.|+..|+.++++.||+.     |+|+|.+|..             |+||||+|+..|+.+++++|++   +|+++
T Consensus        91 ~t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~  165 (256)
T 2etb_A           91 HSALHIAIEKRSLQCVKLLVEN-----GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL  165 (256)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred             CCHHHHHHHcCCHHHHHHHHHc-----CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc
Confidence            4568889999999999999997     9999999986             9999999999999999999999   99988


Q ss_pred             C-------hHHHHHHh--cCCHH-------HHHHHHhcCCcc-------CCCCCCCCCCCCccccccChHHHHHhhhhhh
Q psy7030         105 K-------DALLQAIN--SEFVE-------AVELLLEYEEIV-------HKEGEPYLSRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       105 ~-------tpLh~A~~--~g~~e-------iv~~Ll~~~~~~-------~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                      +       ||||+|+.  .++.+       ++++|+++|+++       +.. +..|+||||+|+..++.+++..|.+++
T Consensus       166 n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~-d~~g~tpL~~A~~~g~~~~v~~Ll~~g  244 (256)
T 2etb_A          166 EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEIS-NHQGLTPLKLAAKEGKIEIFRHILQRE  244 (256)
T ss_dssp             TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred             CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccccccccc-CCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence            6       99999999  88988       999999999999       544 488999999999999999998888777


Q ss_pred             HHH
Q psy7030         162 ADV  164 (377)
Q Consensus       162 ~~~  164 (377)
                      ...
T Consensus       245 ~~~  247 (256)
T 2etb_A          245 FSG  247 (256)
T ss_dssp             HHH
T ss_pred             CCC
Confidence            654

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.74  E-value=1.1e-17  Score=160.00  Aligned_cols=114  Identities=18%  Similarity=0.229  Sum_probs=100.6

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------------
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDP-LGRSALTLAIEGENLEMTELLIVMGVEPK-------------  105 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~-~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------------  105 (377)
                      .++.|+.||++||.++|+.||+.     |+|+|.+|. .|+||||+|+..||.+++++|+++|++++             
T Consensus        25 ~~t~L~~Av~~g~~~~V~~LL~~-----Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~   99 (337)
T 4g8k_A           25 DNHLLIKAVQNEDVDLVQQLLEG-----GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA   99 (337)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHH-----TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred             CChHHHHHHHcCCHHHHHHHHHC-----CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence            46679999999999999999998     999999875 59999999999999999999999998763             


Q ss_pred             ---------------------------hHHHHHHhcCCHHHHHHHHhcCCccCCC---------CCCCCCCCCccccccC
Q psy7030         106 ---------------------------DALLQAINSEFVEAVELLLEYEEIVHKE---------GEPYLSRKPPKSCQNT  149 (377)
Q Consensus       106 ---------------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~---------~~~~~~t~lh~ac~~n  149 (377)
                                                 ||||+|+..|+.+++++|+++|++++..         .+..|.||||.||..+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g  179 (337)
T 4g8k_A          100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG  179 (337)
T ss_dssp             HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred             HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence                                       8999999999999999999999988632         2345889999999999


Q ss_pred             hHHHHHhhh
Q psy7030         150 AYRILLLLV  158 (377)
Q Consensus       150 ~~~~l~~L~  158 (377)
                      +.+++..|.
T Consensus       180 ~~~~v~~LL  188 (337)
T 4g8k_A          180 HVEVLKILL  188 (337)
T ss_dssp             CHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            999986555

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.73  E-value=5.4e-18  Score=157.41  Aligned_cols=117  Identities=12%  Similarity=0.148  Sum_probs=107.6

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCC--------------CCCcHHHHHHHcCCHHHHHHHHh---CCCC
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDP--------------LGRSALTLAIEGENLEMTELLIV---MGVE  103 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~--------------~G~TpLh~A~~~g~~~iv~~Ll~---~ga~  103 (377)
                      .+.|+.|+..|+.++++.||+.     |+|+|.+|.              .|+||||+|+..|+.+++++|++   +|++
T Consensus       102 ~tpL~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad  176 (273)
T 2pnn_A          102 QTALHIAIERRNMTLVTLLVEN-----GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD  176 (273)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHC-----CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence            3568889999999999999997     999999987              79999999999999999999999   8998


Q ss_pred             cC-------hHHHHHHhcCC---------HHHHHHHHhcCCccCC------CCCCCCCCCCccccccChHHHHHhhhhhh
Q psy7030         104 PK-------DALLQAINSEF---------VEAVELLLEYEEIVHK------EGEPYLSRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       104 i~-------tpLh~A~~~g~---------~eiv~~Ll~~~~~~~~------~~~~~~~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                      ++       ||||+|+..|+         .+++++|+++|++++.      ..+..|.||||+|+..++.+++..|.++|
T Consensus       177 ~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g  256 (273)
T 2pnn_A          177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE  256 (273)
T ss_dssp             TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred             ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCC
Confidence            86       99999999998         8999999999999974      34588999999999999999998888787


Q ss_pred             H
Q psy7030         162 A  162 (377)
Q Consensus       162 ~  162 (377)
                      +
T Consensus       257 a  257 (273)
T 2pnn_A          257 I  257 (273)
T ss_dssp             T
T ss_pred             C
Confidence            7

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.73  E-value=1.3e-17  Score=150.59  Aligned_cols=118  Identities=18%  Similarity=0.144  Sum_probs=105.9

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCC-------------CCCcHHHHHHHcCCHHHHHHHHhCCCCcC--
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDP-------------LGRSALTLAIEGENLEMTELLIVMGVEPK--  105 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~-------------~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--  105 (377)
                      .+.++.|+..|+.++++.|++.     |++++.+|.             .|+||||+|+..|+.+++++|+++|++++  
T Consensus        76 ~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~  150 (232)
T 2rfa_A           76 QTALHIAVINQNVNLVRALLAR-----GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQ  150 (232)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred             cCHHHHHHHcCCHHHHHHHHhC-----CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence            3468889999999999999997     999998766             79999999999999999999999999886  


Q ss_pred             -----hHHHHHHhcCCHHHH----HHHHhcCCccC-----CCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         106 -----DALLQAINSEFVEAV----ELLLEYEEIVH-----KEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       106 -----tpLh~A~~~g~~eiv----~~Ll~~~~~~~-----~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                           ||||+|+..|+.+++    ++|+++|++.+     ...+..|.||||+|+..++.+++..|.+++..
T Consensus       151 d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~  222 (232)
T 2rfa_A          151 DSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH  222 (232)
T ss_dssp             CTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence                 999999999999988    99999999874     23458899999999999999999888877654

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.73  E-value=1.3e-17  Score=158.56  Aligned_cols=121  Identities=17%  Similarity=0.116  Sum_probs=110.6

Q ss_pred             CCHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccc------cCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCcC--
Q psy7030          37 LTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINC------VDPLGRSALTLAIEG---ENLEMTELLIVMGVEPK--  105 (377)
Q Consensus        37 l~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~------~D~~G~TpLh~A~~~---g~~~iv~~Ll~~ga~i~--  105 (377)
                      .++..++++.|+..|+.+.++.|++.     |+|+|.      +|..|+||||+|+..   |+.+++++|+++|++++  
T Consensus       148 ~~~~~~~L~~A~~~g~~~~v~~ll~~-----g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~  222 (301)
T 2b0o_E          148 CTPEPQRLWTAICNRDLLSVLEAFAN-----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAK  222 (301)
T ss_dssp             CC-CHHHHHHHHHTTCHHHHHHHHHT-----TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCC
T ss_pred             cCchHHHHhhhhhccCHHHHHHHHhc-----CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCC
Confidence            45567889999999999999999987     999998      699999999999997   89999999999999886  


Q ss_pred             -----hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         106 -----DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       106 -----tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                           ||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++.+|.+++.+
T Consensus       223 d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~G~TpL~~A~~~~~~~iv~~Ll~~ga~  284 (301)
T 2b0o_E          223 AADGNTALHYAALYNQPDCLKLLLKGRALVGTVN-EAGETALDIARKKHHKECEELLEQAQAG  284 (301)
T ss_dssp             CTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCC-TTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence                 99999999999999999999999998764 8899999999999999999888877765

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.73  E-value=1.7e-17  Score=129.00  Aligned_cols=83  Identities=29%  Similarity=0.402  Sum_probs=78.7

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus         4 t~L~~A~~~~~~~~v~~Ll~~-----g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~   78 (93)
T 1n0q_A            4 TPLHLAARNGHLEVVKLLLEA-----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN   78 (93)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             cHHHHHHHcCCHHHHHHHHHc-----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence            457889999999999999997     99999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCc
Q psy7030         115 EFVEAVELLLEYEEI  129 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~  129 (377)
                      |+.+++++|+++|++
T Consensus        79 ~~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           79 GHLEVVKLLLEAGAY   93 (93)
T ss_dssp             TCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHcCCC
Confidence            999999999999974

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.73  E-value=1.6e-17  Score=148.88  Aligned_cols=109  Identities=18%  Similarity=0.110  Sum_probs=51.8

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHI-DINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~-dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      ++.|+..|+.++++.|++.     +. +++.+|..|+||||+|+..|+.++++.|+++|++++       ||||+|+..|
T Consensus        62 L~~A~~~~~~~~v~~Ll~~-----~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  136 (223)
T 2f8y_A           62 LHAAVSADAQGVFQILIRN-----RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN  136 (223)
T ss_dssp             HHHHHHTTCHHHHHHHHHB-----TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred             HHHHHHcCCHHHHHHHHHc-----CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC
Confidence            4445555555555555543     22 444444445555555555555555555544444443       4455555444


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      +.+++++|+++|++++..+ ..|.||||.||..++.+++..|.
T Consensus       137 ~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll  178 (223)
T 2f8y_A          137 NVDAAVVLLKNGANKDMQN-NREETPLFLAAREGSYETAKVLL  178 (223)
T ss_dssp             CHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCcC-CCCcCHHHHHHHcCCHHHHHHHH
Confidence            5555555544444444332 44444444444444444443333

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.72  E-value=4.2e-18  Score=159.16  Aligned_cols=120  Identities=16%  Similarity=0.172  Sum_probs=108.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.|+.||..|+.++++.||+.     |+|++.++..|.||+|.|+..++.+++++|+++|++++       ||||+|+..
T Consensus        88 TpLh~A~~~g~~~~v~~Ll~~-----~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~  162 (269)
T 4b93_B           88 SPLHVAALHGRADLIPLLLKH-----GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG  162 (269)
T ss_dssp             CHHHHHHHTTCTTHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred             CHHHHHHHcCcHHHHHHHHhc-----CCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence            468889999999999999997     99999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVILL  167 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~ll  167 (377)
                      |+.+++++|+++|+++|..+ ..|.||||+||..++.+++..|.++|++....
T Consensus       163 g~~~~v~~Ll~~gadvn~~~-~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~  214 (269)
T 4b93_B          163 GHHELVALLLQHGASINASN-NKGNTALHEAVIEKHVFVVELLLLHGASVQVL  214 (269)
T ss_dssp             TCGGGHHHHHHTTCCTTCBC-TTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred             CCHHHHHHHHHCCCCCCccc-cCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence            99999999999999998764 78999999999999999998888788775443

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.72  E-value=2e-17  Score=155.45  Aligned_cols=118  Identities=14%  Similarity=0.090  Sum_probs=106.6

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcc------cccCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCcC-----
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDI------NCVDPLGRSALTLAIEG---ENLEMTELLIVMGVEPK-----  105 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dv------n~~D~~G~TpLh~A~~~---g~~~iv~~Ll~~ga~i~-----  105 (377)
                      .-..++.|++.||.+.++.+++.     |+++      +..|..|+||||+|+..   |+.+++++|+++|++++     
T Consensus       130 ~l~~l~~a~~~~d~~~~~~ll~~-----g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~  204 (278)
T 1dcq_A          130 KLHSLCEAVKTRDIFGLLQAYAD-----GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGK  204 (278)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHT-----TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTT
T ss_pred             hhhhhhhHhhhcccHHHHHHHHh-----hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCC
Confidence            34678999999999999999997     8884      45589999999999999   99999999999999986     


Q ss_pred             --hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         106 --DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       106 --tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                        ||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++..|.+++..
T Consensus       205 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  263 (278)
T 1dcq_A          205 GSTALHYCCLTDNAECLKLLLRGKASIEIAN-ESGETPLDIAKRLKHEHCEELLTQALSG  263 (278)
T ss_dssp             CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence              99999999999999999999999999764 8899999999999999999877766653

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.72  E-value=6.1e-18  Score=156.59  Aligned_cols=116  Identities=21%  Similarity=0.139  Sum_probs=84.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-------------------
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVE-------------------  103 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~-------------------  103 (377)
                      .++.||..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++                   
T Consensus        48 ~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~  122 (282)
T 1oy3_D           48 ALHLAAILGEASTVEKLYAA-----GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD  122 (282)
T ss_dssp             HHHHHHHHTCHHHHHHHHHT-----TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------
T ss_pred             HHHHHHHcCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcc
Confidence            46667777777777777776     777777777777777777777777777777776643                   


Q ss_pred             ----------------------------c-------ChHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCcccccc
Q psy7030         104 ----------------------------P-------KDALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQN  148 (377)
Q Consensus       104 ----------------------------i-------~tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~  148 (377)
                                                  +       .||||+|+..|+.+++++|+++|++++..++..|.||||.||..
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~  202 (282)
T 1oy3_D          123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA  202 (282)
T ss_dssp             ---------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred             hhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHc
Confidence                                        1       17777777777777777777777777766545577777777777


Q ss_pred             ChHHHHHhhhhhhHH
Q psy7030         149 TAYRILLLLVSQRAD  163 (377)
Q Consensus       149 n~~~~l~~L~s~~~~  163 (377)
                      ++.+++..|.++|++
T Consensus       203 ~~~~~v~~Ll~~gad  217 (282)
T 1oy3_D          203 QAASVLELLLKAGAD  217 (282)
T ss_dssp             TCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHcCCC
Confidence            777777666655554

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.72  E-value=1.2e-17  Score=146.24  Aligned_cols=104  Identities=20%  Similarity=0.162  Sum_probs=96.0

Q ss_pred             HhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHH
Q psy7030          39 LEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQ  110 (377)
Q Consensus        39 ~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~  110 (377)
                      ..++.++.|+..|+.++++.||+      |+++|.+|..|+||||+|+..|+.+++++|+++|++++        ||||+
T Consensus        43 ~g~t~L~~A~~~g~~~~v~~Ll~------~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~  116 (183)
T 3deo_A           43 EYETPWWTAARKADEQALSQLLE------DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM  116 (183)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHTT------TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHh------cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence            34677999999999999999997      68999999999999999999999999999999998884        99999


Q ss_pred             HHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccC
Q psy7030         111 AINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNT  149 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n  149 (377)
                      |+..|+.+++++|+++|++++..+ ..|.||||+|+..+
T Consensus       117 A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~~A~~~~  154 (183)
T 3deo_A          117 AAGYVRPEVVEALVELGADIEVED-ERGLTALELAREIL  154 (183)
T ss_dssp             HHHTTCHHHHHHHHHHTCCTTCCC-TTSCCHHHHHHHHH
T ss_pred             HHhcCcHHHHHHHHHcCCCCcCCC-CCCCCHHHHHHHhc
Confidence            999999999999999999998754 88999999998753

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.72  E-value=1.3e-17  Score=150.26  Aligned_cols=109  Identities=19%  Similarity=0.214  Sum_probs=59.3

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      ++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..|+
T Consensus        44 L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~  118 (231)
T 3aji_A           44 LHWACSAGHTEIVEFLLQL-----GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNR  118 (231)
T ss_dssp             HHHHHHHTCHHHHHHHHHT-----TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             HHHHHHcCcHHHHHHHHHh-----CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence            4445555555555555554     55555555555555555555555555555555555443       55555555555


Q ss_pred             HHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         117 VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      .+++++|+++|++++..+ ..|.||||.||..++.+++..|.
T Consensus       119 ~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll  159 (231)
T 3aji_A          119 HEIAVMLLEGGANPDAKD-HYDATAMHRAAAKGNLKMVHILL  159 (231)
T ss_dssp             HHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCcC-CCCCcHHHHHHHcCCHHHHHHHH
Confidence            555555555555554332 44555555555555555554443

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.72  E-value=3.2e-17  Score=153.57  Aligned_cols=113  Identities=20%  Similarity=0.217  Sum_probs=104.3

Q ss_pred             HhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHH
Q psy7030          39 LEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQA  111 (377)
Q Consensus        39 ~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A  111 (377)
                      ..++.++.||..|+.++++.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|
T Consensus        39 ~~~t~l~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A  113 (299)
T 1s70_B           39 DDGAVFLAACSSGDTEEVLRLLER-----GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAA  113 (299)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHH-----CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHc-----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence            346789999999999999999998     99999999999999999999999999999999999886       999999


Q ss_pred             HhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhh
Q psy7030         112 INSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLL  157 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L  157 (377)
                      +..|+.+++++|+++|++++..+ ..|.||||.|+..+..+.+..+
T Consensus       114 ~~~g~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~l  158 (299)
T 1s70_B          114 ASCGYLDIAEYLISQGAHVGAVN-SEGDTPLDIAEEEAMEELLQNE  158 (299)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHCCSHHHHHHHHHH
T ss_pred             HHcCCHHHHHHHHhCCCCCCCcC-CCCCCHHHHHHhcchHHHHHHH
Confidence            99999999999999999998754 7899999999998888877433

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.72  E-value=5.1e-18  Score=154.07  Aligned_cols=120  Identities=20%  Similarity=0.130  Sum_probs=104.0

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc-------------ChH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP-------------KDA  107 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i-------------~tp  107 (377)
                      .+.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++.             .||
T Consensus        46 ~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~  120 (236)
T 1ikn_D           46 QTPLHLAVITNQPEIAEALLGA-----GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTC  120 (236)
T ss_dssp             CCHHHHHHHTTCHHHHHCCCSC-----CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCH
Confidence            3568889999999999999987     9999999999999999999999999999999988642             299


Q ss_pred             HHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHH
Q psy7030         108 LLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVI  165 (377)
Q Consensus       108 Lh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~  165 (377)
                      ||+|+..|+.+++++|+++|++++..+...|.||||+||..++.+++..|.++|++..
T Consensus       121 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~  178 (236)
T 1ikn_D          121 LHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN  178 (236)
T ss_dssp             HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            9999999999999999999999987764589999999999999999977776766543

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.72  E-value=2e-17  Score=157.49  Aligned_cols=120  Identities=18%  Similarity=0.224  Sum_probs=109.7

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAI  112 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~  112 (377)
                      ..+.++.||+.|+.+.++.+|..    .+.++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+
T Consensus        24 ~~~~L~~A~~~g~~~~v~~ll~~----~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   99 (351)
T 3utm_A           24 KKDELLEAARSGNEEKLMALLTP----LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNAC   99 (351)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHCCT----TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             cchhHHHHHHcCCHHHHHHHHHh----cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHH
Confidence            35679999999999999999986    589999999999999999999999999999999999886       9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      ..|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++.+.
T Consensus       100 ~~g~~~iv~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~  150 (351)
T 3utm_A          100 SYGHYEVTELLLKHGACVNAMD-LWQFTPLHEAASKNRVEVCSLLLSHGADP  150 (351)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             HCCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            9999999999999999998754 78999999999999999997777666553

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.72  E-value=1.4e-17  Score=156.07  Aligned_cols=120  Identities=18%  Similarity=0.109  Sum_probs=108.2

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC---------------
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK---------------  105 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~---------------  105 (377)
                      .+.++.||..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++               
T Consensus        74 ~t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~  148 (299)
T 1s70_B           74 LTALHQACIDDNVDMVKFLVEN-----GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE  148 (299)
T ss_dssp             CBHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCS
T ss_pred             CCHHHHHHHcCCHHHHHHHHHC-----CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHh
Confidence            3568889999999999999997     99999999999999999999999999999999987652               


Q ss_pred             ----------------------------------------------------hHHHHHHhcCCHHHHHHHHhcCCccCCC
Q psy7030         106 ----------------------------------------------------DALLQAINSEFVEAVELLLEYEEIVHKE  133 (377)
Q Consensus       106 ----------------------------------------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~  133 (377)
                                                                          ||||+|+..|+.+++++|+++|++++..
T Consensus       149 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~  228 (299)
T 1s70_B          149 EAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK  228 (299)
T ss_dssp             HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC
T ss_pred             cchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCc
Confidence                                                                7899999999999999999999999876


Q ss_pred             CCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         134 GEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       134 ~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      + ..|.||||+||..++.+++..|.++|++...
T Consensus       229 d-~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~  260 (299)
T 1s70_B          229 D-YDGWTPLHAAAHWGKEEACRILVENLCDMEA  260 (299)
T ss_dssp             C-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             C-CCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence            4 7899999999999999999888777766443

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.72  E-value=3.3e-17  Score=144.49  Aligned_cols=116  Identities=18%  Similarity=0.250  Sum_probs=102.7

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.++.|+..|+.+.++.||+.    .+.++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+.
T Consensus         6 ~~~L~~A~~~g~~~~v~~ll~~----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~   81 (201)
T 3hra_A            6 VGALLEAANQRDTKKVKEILQD----TTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA   81 (201)
T ss_dssp             TTHHHHHHHTTCHHHHHHHHTC----TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             ccHHHHHHHhccHHHHHHHHHc----CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            3468899999999999999987    356999999999999999999999999999999999886       99999999


Q ss_pred             cCCHHHHHHHHh-cCCccCCCCCCCCCCCCccccccChHHHHHhhhhhh
Q psy7030         114 SEFVEAVELLLE-YEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       114 ~g~~eiv~~Ll~-~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                      .|+.+++++|++ .+++++.. +..|.||||.||..++.+++..|.+++
T Consensus        82 ~~~~~~~~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g  129 (201)
T 3hra_A           82 QGRTEILAYMLKHATPDLNKH-NRYGGNALIPAAEKGHIDNVKLLLEDG  129 (201)
T ss_dssp             TTCHHHHHHHHHHSCCCTTCC-CTTSCCSHHHHHHTTCHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHhccCcccccc-cCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence            999999999994 55566654 478999999999999999997776554

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.72  E-value=1.4e-17  Score=153.06  Aligned_cols=102  Identities=21%  Similarity=0.178  Sum_probs=94.7

Q ss_pred             HhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHH
Q psy7030          39 LEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQ  110 (377)
Q Consensus        39 ~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~  110 (377)
                      ..++.++.|++.|+.++++.||+      |+|+|.+|..|+||||+|+..|+.+++++|+++|++++        ||||+
T Consensus        44 ~g~t~L~~A~~~g~~~~v~~Ll~------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~  117 (244)
T 3ui2_A           44 EYETPWWTAARKADEQALSQLLE------DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM  117 (244)
T ss_dssp             HHHHHHHHHHTTTCHHHHHHTTT------TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHH
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence            34678999999999999999997      78999999999999999999999999999999999884        99999


Q ss_pred             HHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccc
Q psy7030         111 AINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQ  147 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~  147 (377)
                      |+..|+.+++++|+++|++++..+ ..|+||||+|+.
T Consensus       118 A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~t~l~~A~~  153 (244)
T 3ui2_A          118 AAGYVRPEVVEALVELGADIEVED-ERGLTALELARE  153 (244)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTCCC-TTCCCHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHH
Confidence            999999999999999999998754 789999999885

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.72  E-value=6.1e-18  Score=149.59  Aligned_cols=113  Identities=9%  Similarity=0.039  Sum_probs=91.8

Q ss_pred             HHHHHHHHcCCH----HHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCC------HHHHHHHHhCCCCcC------
Q psy7030          42 KKYLLSVERGDT----ATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN------LEMTELLIVMGVEPK------  105 (377)
Q Consensus        42 ~~ll~Aa~~g~~----~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~------~~iv~~Ll~~ga~i~------  105 (377)
                      +.|+.|+.+|+.    ++++.||+.     |+|+|.+|..|+||||+|+..|+      .+++++|+++|++++      
T Consensus        40 T~Lh~A~~~~~~~~~~~iv~~Ll~~-----Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g  114 (186)
T 3t8k_A           40 NILYDVLRNNNDEARYKISMFLINK-----GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPY  114 (186)
T ss_dssp             THHHHHTTCSCHHHHHHHHHHHHHT-----TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGG
T ss_pred             CHHHHHHHcCCcchHHHHHHHHHHC-----CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCc
Confidence            457788888875    478888887     89999999999999999988887      578899999998886      


Q ss_pred             --hHHHHHHhcC-----CHHHHHHHHh-cCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         106 --DALLQAINSE-----FVEAVELLLE-YEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       106 --tpLh~A~~~g-----~~eiv~~Ll~-~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                        ||||+|+..+     +.+++++|++ +|++++..+ ..|.||||+|+..+..+++..|.+.
T Consensus       115 ~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d-~~G~TpL~~A~~~~~~~~v~~L~~~  176 (186)
T 3t8k_A          115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD-KWGLTALEFVKRCQKPIALKMMEDY  176 (186)
T ss_dssp             TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCC-TTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred             CchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccC-CCCCCHHHHHHHcCCHHHHHHHHHH
Confidence              8899998843     4568889998 899888754 7888999999888888888655533

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.71  E-value=1.3e-17  Score=161.36  Aligned_cols=119  Identities=14%  Similarity=0.045  Sum_probs=110.0

Q ss_pred             HHHHHHHHcC--CHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-----cC-------hH
Q psy7030          42 KKYLLSVERG--DTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVE-----PK-------DA  107 (377)
Q Consensus        42 ~~ll~Aa~~g--~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~-----i~-------tp  107 (377)
                      +.++.|+..|  +.++++.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++     ++       ||
T Consensus       140 t~L~~A~~~g~~~~~~v~~Ll~~-----ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~  214 (364)
T 3ljn_A          140 TALHWCVGLGPEYLEMIKILVQL-----GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSH  214 (364)
T ss_dssp             CHHHHHHHSCGGGHHHHHHHHHH-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCT
T ss_pred             CHHHHHHHcCCchHHHHHHHHHc-----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcH
Confidence            4688899999  99999999998     999999999999999999999999999999999887     54       99


Q ss_pred             HHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         108 LLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       108 Lh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      ||+|+..|+.+++++|+++|++++..+ ..|.||||+||..++.+++..|..++.+...
T Consensus       215 L~~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~  272 (364)
T 3ljn_A          215 LHWAILINWEDVAMRFVEMGIDVNMED-NEHTVPLYLSVRAAMVLLTKELLQKTDVFLI  272 (364)
T ss_dssp             THHHHTTTCHHHHHHHHTTTCCTTCCC-TTSCCHHHHHHHTCCHHHHHHHHHHSCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHhChHHHHHHHHHcCCchhh
Confidence            999999999999999999999998754 8899999999999999999888877766554

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.71  E-value=3.4e-17  Score=148.18  Aligned_cols=110  Identities=24%  Similarity=0.213  Sum_probs=64.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVD-PLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D-~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      .++.|+..|+.++++.|++.     |++++.+| ..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus       119 ~L~~A~~~~~~~~~~~Ll~~-----g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  193 (241)
T 1k1a_A          119 ALHVAVNTECQETVQLLLER-----GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGR  193 (241)
T ss_dssp             HHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHc-----CCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence            35556666666666666655     66666555 556666666666666666666666665553       666666666


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      |+.+++++|+++|++++..+ ..|.||+|+|+..+..+++..|.
T Consensus       194 ~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~A~~~~~~~i~~~l~  236 (241)
T 1k1a_A          194 GLLPLVRTLVRSGADSSLKN-CHNDTPLMVARSRRVIDILRGKA  236 (241)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCTTTTCSSHHHHHHHTC--
T ss_pred             CCHHHHHHHHhcCCCCCCcC-CCCCCHHHHHHhcCcHHHHhhhc
Confidence            66666666666666665432 55666666666655555554433

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.71  E-value=1.8e-17  Score=148.89  Aligned_cols=116  Identities=20%  Similarity=0.208  Sum_probs=80.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCC--CcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHH
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHH--IDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAI  112 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g--~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~  112 (377)
                      +.++.|+..|+.++++.|++.     |  ++++.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+
T Consensus        74 t~L~~A~~~~~~~~~~~Ll~~-----g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~  148 (228)
T 2dzn_A           74 TPFHIACSVGNLEVVKSLYDR-----PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAA  148 (228)
T ss_dssp             CHHHHHHHHCCHHHHHHHHSS-----SSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHhC-----CCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence            345667777777777777765     5  6677777777777777777777777777777776664       7777777


Q ss_pred             hcCCHHHHHHHHhcC-CccCCCCCCCCCCCCccccccChHHHHHhhh-hhhHH
Q psy7030         113 NSEFVEAVELLLEYE-EIVHKEGEPYLSRKPPKSCQNTAYRILLLLV-SQRAD  163 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~-~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~-s~~~~  163 (377)
                      ..|+.+++++|+++| ++++..+ ..|+||||+|+..++.+++..|. ++|++
T Consensus       149 ~~~~~~~v~~Ll~~g~~~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~  200 (228)
T 2dzn_A          149 SVGSLKLIELLCGLGKSAVNWQD-KQGWTPLFHALAEGHGDAAVLLVEKYGAE  200 (228)
T ss_dssp             HTTCHHHHHHHHTTTCCCSCCCC-TTSCCHHHHHHHTTCHHHHHHHHHHHCCC
T ss_pred             HcCCHHHHHHHHhcCcccccCcC-CCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence            777777777777777 6665443 66777777777777777775554 44443

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.71  E-value=2.8e-17  Score=148.19  Aligned_cols=118  Identities=19%  Similarity=0.129  Sum_probs=99.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      ..++.|+..|+.+.++.+++.    .+.+++.+|..|+||||+|+..|+.++++.|+++|++++       ||||+|+..
T Consensus         8 ~~l~~A~~~g~~~~v~~ll~~----~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   83 (231)
T 3aji_A            8 IMICNLAYSGKLDELKERILA----DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASA   83 (231)
T ss_dssp             SHHHHHHHHTCHHHHHHHHHH----CGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred             chHHHHHHhCCHHHHHHHHHh----chhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHc
Confidence            457889999999999999987    244577888999999999999999999999999988775       899999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      |+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++.+.
T Consensus        84 ~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~  132 (231)
T 3aji_A           84 GXDEIVKALLVKGAHVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANP  132 (231)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             CHHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            99999999999999888653 77889999999999999887776555443

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.71  E-value=1.7e-17  Score=152.66  Aligned_cols=115  Identities=18%  Similarity=0.111  Sum_probs=65.9

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHI-DINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~-dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      .++.|+..|+.++++.|++.     |. +++.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        93 ~L~~A~~~~~~~~v~~Ll~~-----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~  167 (253)
T 1yyh_A           93 PLHAAVSADAQGVFQILIRN-----RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV  167 (253)
T ss_dssp             HHHHHHHHTCHHHHHHHHHS-----TTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHc-----CCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence            35556666666666666654     33 555555566666666666666666666666555553       566666666


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      |+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.++|++
T Consensus       168 ~~~~~v~~Ll~~ga~~~~~~-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  215 (253)
T 1yyh_A          168 NNVDAAVVLLKNGANKDMQN-NREETPLFLAAREGSYETAKVLLDHFAN  215 (253)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            66666666666665555432 4555666666655555555555444433

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.71  E-value=3.7e-17  Score=148.34  Aligned_cols=118  Identities=21%  Similarity=0.176  Sum_probs=106.9

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCc------ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------h
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHID------INCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------D  106 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~d------vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------t  106 (377)
                      .+.++.|+..|+.++++.|++.     |++      ++.+|..|+||||+|+..|+.+++++|+++|++++        |
T Consensus        79 ~t~L~~A~~~~~~~~v~~Ll~~-----~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t  153 (236)
T 1ikn_D           79 NTPLHLACEQGCLASVGVLTQS-----CTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRT  153 (236)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHS-----TTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHhc-----ccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Confidence            3568889999999999999997     654      67899999999999999999999999999998774        9


Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         107 ALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       107 pLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      |||+|+..|+.+++++|+++|++++..+ ..|.||+|+|+..++.+++..|.++|++.
T Consensus       154 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~  210 (236)
T 1ikn_D          154 ALHLAVDLQNPDLVSLLLKCGADVNRVT-YQGYSPYQLTWGRPSTRIQQQLGQLTLEN  210 (236)
T ss_dssp             HHHHHHHTTCHHHHHHHHTTTCCSCCCC-TTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCccc-CCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence            9999999999999999999999998764 88999999999999999998888777654

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.71  E-value=6.2e-17  Score=149.40  Aligned_cols=118  Identities=19%  Similarity=0.220  Sum_probs=107.9

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCV-DPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQA  111 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~-D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A  111 (377)
                      .++.++.|++.|+.++++.|++.     |+++|.+ |..|+||||+|+..|+.+++++|+++|++++       ||||+|
T Consensus         5 g~~~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A   79 (285)
T 1wdy_A            5 DNHLLIKAVQNEDVDLVQQLLEG-----GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLA   79 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred             cchHHHHHHHcCCHHHHHHHHHc-----CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence            45678899999999999999997     9999987 8899999999999999999999999999875       999999


Q ss_pred             HhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         112 INSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      +..|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++.+
T Consensus        80 ~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~  130 (285)
T 1wdy_A           80 AIAGSVKLLKLFLSKGADVNECD-FYGFTAFMEAAVYGKVKALKFLYKRGAN  130 (285)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCBC-TTCCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HHcCCHHHHHHHHHcCCCCCccC-cccCCHHHHHHHhCCHHHHHHHHHhCCC
Confidence            99999999999999999998654 7899999999999999999777766544

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.70  E-value=3.4e-17  Score=153.71  Aligned_cols=116  Identities=19%  Similarity=0.186  Sum_probs=106.7

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.|+.||..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+.
T Consensus        60 ~t~L~~Aa~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~  134 (285)
T 3d9h_A           60 WSPMHEAAIHGHQLSLRNLISQ-----GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACV  134 (285)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT-----TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            3458889999999999999997     99999999999999999999999999999999999886       99999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      .|+.+++++|+++|++++.+  ..|.||||.||..++.+++..|.+++.+
T Consensus       135 ~~~~~~v~~Ll~~g~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~  182 (285)
T 3d9h_A          135 SGSWDCVNLLLQHGASVQPE--SDLASPIHEAARRGHVECVNSLIAYGGN  182 (285)
T ss_dssp             HTCHHHHHHHHHTTCCSSCS--CTTSCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             cCHHHHHHHHHHCCCCCCCC--CCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            99999999999999999865  4599999999999999999777766554

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.70  E-value=5.1e-17  Score=145.61  Aligned_cols=117  Identities=15%  Similarity=0.174  Sum_probs=106.4

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CcC-------hHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGV-EPK-------DALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga-~i~-------tpLh~A~  112 (377)
                      .+.++.|+..|+.++++.|++.     |++++.+|..|+||||+|+..|+.+++++|+++|. +++       ||||+|+
T Consensus        26 ~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~  100 (223)
T 2f8y_A           26 ETALHLAARYSRSDAAKRLLEA-----SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA  100 (223)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH
T ss_pred             CchHHHHHHcCCHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH
Confidence            3468889999999999999997     99999999999999999999999999999999876 443       9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      ..|+.++++.|+++|++++..+ ..|.||||.||..++.+++..|.+++.+
T Consensus       101 ~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~  150 (223)
T 2f8y_A          101 RLAVEGMLEDLINSHADVNAVD-DLGKSALHWAAAVNNVDAAVVLLKNGAN  150 (223)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCBC-TTSCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HhCcHHHHHHHHHcCCCCcCcC-CCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999999999999998764 7899999999999999999777766654

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.70  E-value=5e-17  Score=158.85  Aligned_cols=115  Identities=15%  Similarity=0.099  Sum_probs=106.1

Q ss_pred             HHHHHHHHHc-CCHHHHHHHHHhhccCCCCcccccC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHH
Q psy7030          41 EKKYLLSVER-GDTATVRKCIKRAYRNHHIDINCVD--PLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQ  110 (377)
Q Consensus        41 e~~ll~Aa~~-g~~~~v~~LL~~~~~~~g~dvn~~D--~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~  110 (377)
                      ++.|+.|+.. |+.++++.||+.     |+|+|..|  ..|+||||+|+..|+.+++++|+++|++++       ||||+
T Consensus       200 ~t~L~~Aa~~~g~~~~v~~LL~~-----Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~  274 (368)
T 3jue_A          200 GALLFRASGHPPSLPTMADALAH-----GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHH  274 (368)
T ss_dssp             HHHHHHHTSSSCCHHHHHHHHHT-----TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             CcHHHHHHHccCCHHHHHHHHHc-----CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence            4578899999 999999999997     99999998  899999999999999999999999999987       99999


Q ss_pred             HHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhh
Q psy7030         111 AINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                      |+..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++.+|...+
T Consensus       275 A~~~g~~~~v~~LL~~Gad~~~~d-~~G~TpL~~A~~~g~~~iv~lLl~~~  324 (368)
T 3jue_A          275 ATILGHTGLACLFLKRGADLGARD-SEGRDPLTIAMETANADIVTLLRLAK  324 (368)
T ss_dssp             HHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHcCcHHHHHHHHHCcCCCCCcC-CCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            999999999999999999998764 78999999999999999996665443

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.70  E-value=4.7e-17  Score=143.52  Aligned_cols=117  Identities=21%  Similarity=0.226  Sum_probs=95.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCcC-------hHHHHHHh
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLI-VMGVEPK-------DALLQAIN  113 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll-~~ga~i~-------tpLh~A~~  113 (377)
                      +.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.++++.|+ +.+++++       ||||.|+.
T Consensus        41 t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~  115 (201)
T 3hra_A           41 TPLNIAVHNNDIEIAKALIDR-----GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAE  115 (201)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHH
Confidence            457779999999999999987     8999999999999999999999999999998 4555554       89999999


Q ss_pred             cCCHHHHHHHHhcC-CccCCCCCCCCCCCCccccccCh-----HHHHHhhhhhhHHH
Q psy7030         114 SEFVEAVELLLEYE-EIVHKEGEPYLSRKPPKSCQNTA-----YRILLLLVSQRADV  164 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~-~~~~~~~~~~~~t~lh~ac~~n~-----~~~l~~L~s~~~~~  164 (377)
                      .|+.+++++|+++| ++++.. +..|.||||.||..++     .+++..|.++|++.
T Consensus       116 ~~~~~~v~~Ll~~g~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~  171 (201)
T 3hra_A          116 KGHIDNVKLLLEDGREDIDFQ-NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ  171 (201)
T ss_dssp             TTCHHHHHHHHHHCCCCTTCC-CTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred             cCCHHHHHHHHHcCCCCcCCC-CCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence            99999999999988 777654 3788899999888766     77776666555443

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.70  E-value=3e-17  Score=150.97  Aligned_cols=117  Identities=15%  Similarity=0.174  Sum_probs=107.4

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CcC-------hHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGV-EPK-------DALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga-~i~-------tpLh~A~  112 (377)
                      .+.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|+ +++       ||||+|+
T Consensus        58 ~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~  132 (253)
T 1yyh_A           58 ETALHLAARYSRSDAAKRLLEA-----SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA  132 (253)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHH
T ss_pred             CcHHHHHHHcCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Confidence            3568889999999999999997     99999999999999999999999999999999986 543       9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      ..|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.++|++
T Consensus       133 ~~~~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  182 (253)
T 1yyh_A          133 RLAVEGMLEDLINSHADVNAVD-DLGKSALHWAAAVNNVDAAVVLLKNGAN  182 (253)
T ss_dssp             HHTCSSHHHHHHHTTCCTTCBC-TTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             HcChHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999999999999998764 7899999999999999999888777665

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.69  E-value=4e-17  Score=151.04  Aligned_cols=117  Identities=17%  Similarity=0.066  Sum_probs=104.2

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCc---ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHH
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHID---INCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQA  111 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~d---vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A  111 (377)
                      +.|+.||+.|+.++++.||+.     |++   +|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|
T Consensus        11 t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A   85 (282)
T 1oy3_D           11 TALHLAVIHQHEPFLDFLLGF-----SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLA   85 (282)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHH-----HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred             cHHHHHHHcCCHHHHHHHHhc-----CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence            457889999999999999997     777   88999999999999999999999999999999886       999999


Q ss_pred             HhcCCHHHHHHHHhcCCcc-----------------------------------------------CCCCCCCCCCCCcc
Q psy7030         112 INSEFVEAVELLLEYEEIV-----------------------------------------------HKEGEPYLSRKPPK  144 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~~~~~~-----------------------------------------------~~~~~~~~~t~lh~  144 (377)
                      +..|+.+++++|+++|++.                                               +. .+..|.||||.
T Consensus        86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~t~L~~  164 (282)
T 1oy3_D           86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA-ENYDGHTPLHV  164 (282)
T ss_dssp             TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC-CCTTSCCHHHH
T ss_pred             HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCC-cCCCCcCHHHH
Confidence            9999999999999988762                                               22 24679999999


Q ss_pred             ccccChHHHHHhhhhhhHHH
Q psy7030         145 SCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       145 ac~~n~~~~l~~L~s~~~~~  164 (377)
                      ||..++.+++..|.+++.+.
T Consensus       165 A~~~g~~~~v~~Ll~~g~~~  184 (282)
T 1oy3_D          165 AVIHKDAEMVRLLRDAGADL  184 (282)
T ss_dssp             HHHTTCHHHHHHHHHHTCCT
T ss_pred             HHHcCCHHHHHHHHHcCCCC
Confidence            99999999998777776553

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.69  E-value=3e-17  Score=154.18  Aligned_cols=113  Identities=14%  Similarity=0.129  Sum_probs=98.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+++|.+|  |+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        33 t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~  105 (285)
T 3kea_A           33 SASYYAIADNNVRLVCTLLNA-----GALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS  105 (285)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CHHHHHHHcCCHHHHHHHHhC-----CCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHc
Confidence            457889999999999999997     99998885  8999999999999999999999998876       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCC-CCCCccccccChHHHHHhhhhhhH
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYL-SRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~-~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      |+.+++++|+++|++++..+ ..| .||||.||..++.+++..|.+++.
T Consensus       106 g~~~~v~~Ll~~ga~~~~~~-~~g~~t~L~~A~~~~~~~~v~~Ll~~g~  153 (285)
T 3kea_A          106 GNMQTVKLFVKKNWRLMFYG-KTGWKTSFYHAVMLNDVSIVSYFLSEIP  153 (285)
T ss_dssp             TCHHHHHHHHHHCGGGGGCS-SSGGGSHHHHHHHTTCHHHHHHHHTTSC
T ss_pred             CCHHHHHHHHhcCCCCCccC-CCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence            99999999999999998654 566 799999999999998876665543

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.69  E-value=1e-16  Score=144.94  Aligned_cols=116  Identities=20%  Similarity=0.159  Sum_probs=104.7

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.||..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        13 t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   87 (237)
T 3b7b_A           13 SPLHAAAEAGHVDICHMLVQA-----GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKK   87 (237)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHT
T ss_pred             CHHHHHHHcCcHHHHHHHHHc-----CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Confidence            457889999999999999997     99999999999999999999999999999999998875       999999999


Q ss_pred             CCHHHHHHHHhcC-CccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         115 EFVEAVELLLEYE-EIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       115 g~~eiv~~Ll~~~-~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      |+.+++++|+++| .+++.. +..|.||||.||..++.+++..|.+++.+
T Consensus        88 ~~~~~~~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~  136 (237)
T 3b7b_A           88 GHYEVVQYLLSNGQMDVNCQ-DDGGWTPMIWATEYKHVDLVKLLLSKGSD  136 (237)
T ss_dssp             TCHHHHHHHHTTTCCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHhCCCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            9999999999998 666654 47899999999999999999777766554

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.69  E-value=7.9e-17  Score=151.22  Aligned_cols=116  Identities=19%  Similarity=0.197  Sum_probs=107.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC------hHHHHHHhcC
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK------DALLQAINSE  115 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~------tpLh~A~~~g  115 (377)
                      +.|+.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++      ||||+|+..|
T Consensus        94 t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g  168 (285)
T 3d9h_A           94 SPLHEACLGGHLSCVKILLKH-----GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRG  168 (285)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHT
T ss_pred             CHHHHHHHCCcHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcC
Confidence            458889999999999999997     99999999999999999999999999999999998875      9999999999


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      +.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+.+.+
T Consensus       169 ~~~~v~~Ll~~g~~~~~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~ga~  215 (285)
T 3d9h_A          169 HVECVNSLIAYGGNIDHKI-SHLGTPLYLACENQQRACVKKLLESGAD  215 (285)
T ss_dssp             CHHHHHHHHHTTCCTTCCB-TTTBCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHCCCCCCCcC-CCCCCHHHHHHHcCcHHHHHHHHHCCCC
Confidence            9999999999999998654 7899999999999999999777766654

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.69  E-value=4.6e-17  Score=149.51  Aligned_cols=117  Identities=20%  Similarity=0.136  Sum_probs=103.3

Q ss_pred             HHHHHHHHc---CCHHHHHHHHHhhccCCCCcccc-----------cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc---
Q psy7030          42 KKYLLSVER---GDTATVRKCIKRAYRNHHIDINC-----------VDPLGRSALTLAIEGENLEMTELLIVMGVEP---  104 (377)
Q Consensus        42 ~~ll~Aa~~---g~~~~v~~LL~~~~~~~g~dvn~-----------~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i---  104 (377)
                      +.|+.|+..   |+.++++.||+.     |++++.           +|..|+||||+|+..|+.+++++|+++|+++   
T Consensus        45 t~L~~A~~~~~~g~~~~v~~Ll~~-----g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~  119 (256)
T 2etb_A           45 TCLMKAVLNLQDGVNACIMPLLQI-----DKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR  119 (256)
T ss_dssp             CHHHHHHHTCBTTBCTTHHHHHHH-----HHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred             CHHHHHHHccccchHHHHHHHHhc-----CCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence            457889999   999999999998     776653           3478999999999999999999999999874   


Q ss_pred             -----------------ChHHHHHHhcCCHHHHHHHHh---cCCccCCCCCCCCCCCCccccc--cChHH-------HHH
Q psy7030         105 -----------------KDALLQAINSEFVEAVELLLE---YEEIVHKEGEPYLSRKPPKSCQ--NTAYR-------ILL  155 (377)
Q Consensus       105 -----------------~tpLh~A~~~g~~eiv~~Ll~---~~~~~~~~~~~~~~t~lh~ac~--~n~~~-------~l~  155 (377)
                                       .||||+|+..|+.+++++|++   +|++++..+ ..|+||||+||.  .++.+       ++.
T Consensus       120 ~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d-~~g~TpLh~A~~~~~~~~~~~~~~~~iv~  198 (256)
T 2etb_A          120 ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATD-SLGNTVLHALVMIADNSPENSALVIHMYD  198 (256)
T ss_dssp             CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred             cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccC-CCCCCHHHHHHHcccCCchhhHHHHHHHH
Confidence                             399999999999999999999   999999764 799999999998  77777       777


Q ss_pred             hhhhhhHHH
Q psy7030         156 LLVSQRADV  164 (377)
Q Consensus       156 ~L~s~~~~~  164 (377)
                      .|.++|++.
T Consensus       199 ~Ll~~ga~~  207 (256)
T 2etb_A          199 GLLQMGARL  207 (256)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHcCCCc
Confidence            888888875

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.68  E-value=1.3e-16  Score=144.24  Aligned_cols=109  Identities=18%  Similarity=0.189  Sum_probs=52.7

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCcC-------hHHHHHHhcC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG-VEPK-------DALLQAINSE  115 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~g-a~i~-------tpLh~A~~~g  115 (377)
                      ++.|+..|+.++++.|++.     |++++.+|..|+||||+|+..|+.+++++|+++| ++++       ||||+|+..|
T Consensus        48 L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~  122 (237)
T 3b7b_A           48 LMEAAENNHLEAVKYLIKA-----GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK  122 (237)
T ss_dssp             HHHHHHTTCHHHHHHHHTT-----TCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT
T ss_pred             HHHHHHhCCHHHHHHHHhC-----CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Confidence            4445555555555555544     4555555555555555555555555555555544 3332       4555555555


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      +.+++++|+++|++++..+ ..|.||||.|+..++.+++..|.
T Consensus       123 ~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll  164 (237)
T 3b7b_A          123 HVDLVKLLLSKGSDINIRD-NEENICLHWAAFSGCVDIAEILL  164 (237)
T ss_dssp             CHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHCCHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCccC-CCCCCHHHHHHHCCCHHHHHHHH
Confidence            5555555555444444322 34444444444444444443333

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.68  E-value=1.7e-16  Score=142.43  Aligned_cols=108  Identities=16%  Similarity=0.139  Sum_probs=98.4

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCcC-------hHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG-VEPK-------DALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~g-a~i~-------tpLh~A~  112 (377)
                      .+.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++| ++++       ||||+|+
T Consensus       108 ~t~L~~A~~~~~~~~~~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~  182 (228)
T 2dzn_A          108 VTCLHLAVGKKWFEVSQFLIEN-----GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL  182 (228)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT-----TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHH
T ss_pred             CCHHHHHHHcCCHhHHHHHHHc-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHH
Confidence            3458889999999999999997     9999999999999999999999999999999999 7775       9999999


Q ss_pred             hcCCHHHHHHHH-hcCCccCCCCCCCCCCCCccccccChHHHH
Q psy7030         113 NSEFVEAVELLL-EYEEIVHKEGEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       113 ~~g~~eiv~~Ll-~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l  154 (377)
                      ..|+.+++++|+ ++|++++..+ ..|.||+|+|+..+..+.+
T Consensus       183 ~~~~~~~v~~Ll~~~ga~~~~~~-~~g~t~l~~A~~~~~~~~l  224 (228)
T 2dzn_A          183 AEGHGDAAVLLVEKYGAEYDLVD-NKGAKAEDVALNEQVKKFF  224 (228)
T ss_dssp             HTTCHHHHHHHHHHHCCCSCCBC-TTSCBGGGGCSSTTHHHHH
T ss_pred             HcCCHHHHHHHHHhcCCCCCccC-CCCCcHHHHHHHHHHHHHH
Confidence            999999999999 8999998764 8899999999887655543

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.68  E-value=4e-17  Score=153.37  Aligned_cols=118  Identities=16%  Similarity=0.124  Sum_probs=80.0

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHHHh
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQAIN  113 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A~~  113 (377)
                      +.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++        ||||+|+.
T Consensus        64 t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~  138 (285)
T 3kea_A           64 FPLHQAATLEDTKIVKILLFS-----GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM  138 (285)
T ss_dssp             CHHHHHTTSSSCHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHC-----CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHH
Confidence            346667777777777777765     77777777777777777777777777777777766553        67777777


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      .|+.+++++|+++|++....  ..|.||||.||..++.+++..|.++|++...
T Consensus       139 ~~~~~~v~~Ll~~g~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~  189 (285)
T 3kea_A          139 LNDVSIVSYFLSEIPSTFDL--AILLSCIHITIKNGHVDMMILLLDYMTSTNT  189 (285)
T ss_dssp             TTCHHHHHHHHTTSCTTCCC--STHHHHHHHHHHTTCHHHHHHHHHHHHHTCT
T ss_pred             cCCHHHHHHHHhCCCccccc--cCCccHHHHHHHcChHHHHHHHHHcCCCCCc
Confidence            77777777777776655322  3666777777777777777666666665544

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.68  E-value=2.1e-16  Score=142.26  Aligned_cols=117  Identities=15%  Similarity=0.085  Sum_probs=106.7

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQAI  112 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A~  112 (377)
                      ++.++.|++.|+.++++.|++.     |++++.+|..|.||||+|+..|+.+++++|+++|++++        ||||+|+
T Consensus        10 ~~~l~~A~~~g~~~~~~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~   84 (240)
T 3eu9_A           10 TWDIVKATQYGIYERCRELVEA-----GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT   84 (240)
T ss_dssp             GCCHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred             chHHHHHHHcCChHHHHHHHHc-----CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence            3457889999999999999997     99999999999999999999999999999999998764        9999999


Q ss_pred             hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         113 NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       113 ~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      ..|+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++.+
T Consensus        85 ~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~~~~Ll~~~~~  134 (240)
T 3eu9_A           85 RQGHLSMVVQLMKYGADPSLID-GEGCSCIHLAAQFGHTSIVAYLIAKGQD  134 (240)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             HcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHHHHcCHHHHHHHHHhcCCC
Confidence            9999999999999999998653 7899999999999999999777766544

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.68  E-value=1.5e-16  Score=143.89  Aligned_cols=115  Identities=23%  Similarity=0.193  Sum_probs=72.3

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC----CcC-------hHHHHH
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGV----EPK-------DALLQA  111 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga----~i~-------tpLh~A  111 (377)
                      .++.|+..|+.++++.|++.     |++++.+|..|+||||+|+..|+.++++.|+++|+    +++       ||||+|
T Consensus        49 ~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A  123 (241)
T 1k1a_A           49 PLHLAVITTLPSVVRLLVTA-----GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVA  123 (241)
T ss_dssp             HHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHc-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHH
Confidence            35556666666666666665     66666666666666666666666666666666554    222       666666


Q ss_pred             HhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         112 INSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      +..|+.+++++|+++|++++..+...|.||||.||..++.+++..|.++|.
T Consensus       124 ~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~  174 (241)
T 1k1a_A          124 VNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGA  174 (241)
T ss_dssp             HHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             HHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence            666666666666666666665544556666666666666666655554443

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.67  E-value=2.4e-17  Score=150.69  Aligned_cols=118  Identities=15%  Similarity=0.113  Sum_probs=80.7

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.++.|++.|+.+.++.||+.     |+++|.. ..|.||||.|+..|+.++++.|+++|++++       ||||+|+.
T Consensus         6 ~t~L~~a~~~~~~~~~~~ll~~-----g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~   79 (239)
T 1ycs_B            6 QVSLPPGKRTNLRKTGSERIAH-----GMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVC   79 (239)
T ss_dssp             -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHH
T ss_pred             cccCchhhhhhhHHHHHHHhcc-----CCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            4556779999999999999997     9999854 789999999999999999999999998886       99999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHH
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVI  165 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~  165 (377)
                      .|+.+++++|+++|++++..+ ..|+||||.||..++.+++..|.++|++..
T Consensus        80 ~g~~~~v~~Ll~~ga~~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~  130 (239)
T 1ycs_B           80 AGHTEIVKFLVQFGVNVNAAD-SDGWTPLHCAASCNNVQVCKFLVESGAAVF  130 (239)
T ss_dssp             HTCHHHHHHHHHHTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             cCCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence            999999999999999998764 789999999999999999988887777643

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.66  E-value=1.2e-16  Score=157.98  Aligned_cols=111  Identities=15%  Similarity=0.115  Sum_probs=93.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.|+.||..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        16 t~L~~Aa~~g~~~~v~~Ll~~-----g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~   90 (437)
T 1n11_A           16 TPLHVASFMGHLPIVKNLLQR-----GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI   90 (437)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-----TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC
Confidence            357778999999999999987     88888888889999999999999999999998888775       899999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      |+.+++++|+++|++++..+ ..|.||||.||..++.+++..|.
T Consensus        91 g~~~~v~~Ll~~ga~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll  133 (437)
T 1n11_A           91 GHTNMVKLLLENNANPNLAT-TAGHTPLHIAAREGHVETVLALL  133 (437)
T ss_dssp             TCHHHHHHHHHHTCCTTCCC-TTCCCHHHHHHHHTCHHHHHHHH
T ss_pred             CCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHH
Confidence            99999999999888887653 67888888888888888875554

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.66  E-value=9.6e-17  Score=150.13  Aligned_cols=111  Identities=17%  Similarity=0.169  Sum_probs=74.2

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCC-cccccC--------------------------------------CCCCcHH
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHI-DINCVD--------------------------------------PLGRSAL   82 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~-dvn~~D--------------------------------------~~G~TpL   82 (377)
                      +.++.||..|+.++++.||+.     |+ ++|.+|                                      ..|+|||
T Consensus       113 T~Lh~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL  187 (276)
T 4hbd_A          113 TALHYSVSHANFPVVQQLLDS-----GVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTAL  187 (276)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----SCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHH
T ss_pred             CHHHHHHHCCCHHHHHHHHHC-----CCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHH
Confidence            457778888888888888886     54 555444                                      4566666


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHh-cCCccCCCCCCCCCCCCccccccChHHHH
Q psy7030          83 TLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLE-YEEIVHKEGEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus        83 h~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~-~~~~~~~~~~~~~~t~lh~ac~~n~~~~l  154 (377)
                      |+|+..|+.+++++|+++|++++       ||||+|+..|+.+++++|++ .|++++..+ ..|.||||+|+..++.+++
T Consensus       188 h~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d-~~g~TpL~~A~~~g~~~iv  266 (276)
T 4hbd_A          188 MLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTD-RDGSTALMVALDAGQSEIA  266 (276)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCC-TTSCCHHHHHHHHTCHHHH
T ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcC-CCCCCHHHHHHHcCCHHHH
Confidence            66666666666666666666664       66666666666666666666 666666543 5666666666666666666


Q ss_pred             Hhhh
Q psy7030         155 LLLV  158 (377)
Q Consensus       155 ~~L~  158 (377)
                      ..|.
T Consensus       267 ~~Ll  270 (276)
T 4hbd_A          267 SMLY  270 (276)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.66  E-value=1e-16  Score=124.65  Aligned_cols=85  Identities=27%  Similarity=0.320  Sum_probs=77.2

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccC
Q psy7030          77 LGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNT  149 (377)
Q Consensus        77 ~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n  149 (377)
                      +|+||||+|+..|+.+++++|+++|++++       ||||+|+..|+.+++++|+++|++++..+ ..|+||||+||..+
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~t~l~~A~~~~   79 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD-KNGRTPLHLAARNG   79 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHTT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-CCCCCHHHHHHHcC
Confidence            48999999999999999999999999886       99999999999999999999999998764 78999999999999


Q ss_pred             hHHHHHhhhhhhH
Q psy7030         150 AYRILLLLVSQRA  162 (377)
Q Consensus       150 ~~~~l~~L~s~~~  162 (377)
                      +.+++..|.++|+
T Consensus        80 ~~~~~~~Ll~~ga   92 (93)
T 1n0q_A           80 HLEVVKLLLEAGA   92 (93)
T ss_dssp             CHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHcCC
Confidence            9999987776653

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.66  E-value=6.5e-17  Score=142.99  Aligned_cols=117  Identities=11%  Similarity=0.065  Sum_probs=97.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccC-CCCCcHHHHHHHcCCH----HHHHHHHhCCCCcC-------hHHH
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVD-PLGRSALTLAIEGENL----EMTELLIVMGVEPK-------DALL  109 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D-~~G~TpLh~A~~~g~~----~iv~~Ll~~ga~i~-------tpLh  109 (377)
                      +.++.||+.|+.+.++.+++.     +  +|.+| ..|+||||+|+.+|+.    +++++|+++|++++       ||||
T Consensus         8 ~~l~~Aa~~g~~~~~~~l~~~-----~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh   80 (186)
T 3t8k_A            8 RTVSAAAMLGTYEDFLELFEK-----G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFF   80 (186)
T ss_dssp             SSHHHHHHHSCHHHHHHHHHH-----S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHH
T ss_pred             cHHHHHHHcCCHHHHHHHHhc-----C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence            358899999999999999987     4  44555 7899999999999985    59999999999997       9999


Q ss_pred             HHHhcCC------HHHHHHHHhcCCccCCCCCCCCC-CCCccccccC-----hHHHHHhhhh-hhHHHHH
Q psy7030         110 QAINSEF------VEAVELLLEYEEIVHKEGEPYLS-RKPPKSCQNT-----AYRILLLLVS-QRADVIL  166 (377)
Q Consensus       110 ~A~~~g~------~eiv~~Ll~~~~~~~~~~~~~~~-t~lh~ac~~n-----~~~~l~~L~s-~~~~~~l  166 (377)
                      +|+..|+      .+++++|+++|+++|..+ ..|. ||||+|+..+     ..+++.+|.+ +|++...
T Consensus        81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d-~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~  149 (186)
T 3t8k_A           81 PLFQGGGNDITGTTELCKIFLEKGADITALY-KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI  149 (186)
T ss_dssp             HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCB-GGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC
T ss_pred             HHHHcCCcchhhHHHHHHHHHHCCCCCCccC-CCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc
Confidence            9999987      688999999999999765 7888 9999999843     3445556666 6666433

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.66  E-value=7e-17  Score=130.20  Aligned_cols=94  Identities=21%  Similarity=0.218  Sum_probs=84.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        11 t~L~~A~~~~~~~~~~~Ll~~-----g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~   85 (115)
T 2l6b_A           11 TPLHNAAKNGHAEEVKKLLSK-----GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKN   85 (115)
T ss_dssp             CHHHHHHHHTCHHHHHHHTTT-----TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTT
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHC
Confidence            457889999999999999997     99999999999999999999999999999999999885       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCC
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRK  141 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~  141 (377)
                      |+.+++++|+++|++++..+ ..|.+|
T Consensus        86 ~~~~~~~~Ll~~ga~~n~~~-~~~~~~  111 (115)
T 2l6b_A           86 GHHEIVKLLDAKGADVNARS-WGSSHH  111 (115)
T ss_dssp             TCHHHHHHHHTTSSSHHHHS-CCCC--
T ss_pred             CCHHHHHHHHHcCCCCCcCC-cccccc
Confidence            99999999999999998653 555554

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.66  E-value=1.2e-16  Score=158.09  Aligned_cols=113  Identities=13%  Similarity=0.158  Sum_probs=58.3

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .++.|+..|+.++++.|++.     |+++|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..|
T Consensus       215 ~L~~A~~~~~~~~~~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~  289 (437)
T 1n11_A          215 PLHIAAKQNQVEVARSLLQY-----GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEG  289 (437)
T ss_dssp             HHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Confidence            34455555555555555554     55555555555555555555555555555555554443       4555555555


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhh
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQR  161 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~  161 (377)
                      +.+++++|+++|++++..+ ..|.||||.||..++.+++..|.+++
T Consensus       290 ~~~~~~~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g  334 (437)
T 1n11_A          290 HVPVADVLIKHGVMVDATT-RMGYTPLHVASHYGNIKLVKFLLQHQ  334 (437)
T ss_dssp             CHHHHHHHHHHTCCTTCCC-SSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred             CHHHHHHHHhCCccCCCCC-CCCCCHHHHHHHcCcHHHHHHHHhcC
Confidence            5555555555555544332 44555555555555555554444333

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.66  E-value=3.8e-16  Score=144.03  Aligned_cols=114  Identities=14%  Similarity=0.146  Sum_probs=104.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |++++.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        41 t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  115 (285)
T 1wdy_A           41 TPLHNAVQMSREDIVELLLRH-----GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY  115 (285)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT
T ss_pred             cHHHHHHHcCCHHHHHHHHHc-----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh
Confidence            457889999999999999997     99999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCC---------CCCCCCCCccccccChHHHHHhhhhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEG---------EPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~---------~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      |+.+++++|+++|++++...         +..|.||||.||..++.+++..|.++
T Consensus       116 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  170 (285)
T 1wdy_A          116 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE  170 (285)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             CCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh
Confidence            99999999999999998542         46799999999999999999666643

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.65  E-value=2.2e-16  Score=146.50  Aligned_cols=118  Identities=17%  Similarity=0.165  Sum_probs=101.1

Q ss_pred             HHHHHHHHHc---CCHHHHHHHHHhhccCCCCc-------ccc----cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-
Q psy7030          41 EKKYLLSVER---GDTATVRKCIKRAYRNHHID-------INC----VDPLGRSALTLAIEGENLEMTELLIVMGVEPK-  105 (377)
Q Consensus        41 e~~ll~Aa~~---g~~~~v~~LL~~~~~~~g~d-------vn~----~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-  105 (377)
                      .+.|+.|+..   |+.++++.||+.     |++       +|.    +|..|+||||+|+..|+.+++++|+++|++++ 
T Consensus        55 ~tpL~~A~~~~~~g~~~~v~~Ll~~-----ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~  129 (273)
T 2pnn_A           55 KTCLLKAMLNLHNGQNDTIALLLDV-----ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA  129 (273)
T ss_dssp             CCHHHHHHHSCBTTBCHHHHHHHHH-----HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             CCHHHHHHHHHhcCChHHHHHHHHh-----hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence            3457889986   999999999997     654       232    67799999999999999999999999998652 


Q ss_pred             --------------------hHHHHHHhcCCHHHHHHHHh---cCCccCCCCCCCCCCCCccccccCh---------HHH
Q psy7030         106 --------------------DALLQAINSEFVEAVELLLE---YEEIVHKEGEPYLSRKPPKSCQNTA---------YRI  153 (377)
Q Consensus       106 --------------------tpLh~A~~~g~~eiv~~Ll~---~~~~~~~~~~~~~~t~lh~ac~~n~---------~~~  153 (377)
                                          ||||+|+..|+.+++++|++   +|++++..+ ..|+||||+||..++         .++
T Consensus       130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d-~~g~tpLh~A~~~~~~~~~~~~~~~~~  208 (273)
T 2pnn_A          130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARD-SVGNTVLHALVEVADNTVDNTKFVTSM  208 (273)
T ss_dssp             CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred             cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeC-CCCCcHHHHHHHccCcchhHHHHHHHH
Confidence                                89999999999999999999   999998764 789999999998765         566


Q ss_pred             HHhhhhhhHHH
Q psy7030         154 LLLLVSQRADV  164 (377)
Q Consensus       154 l~~L~s~~~~~  164 (377)
                      +..|.++|++.
T Consensus       209 v~~Ll~~ga~~  219 (273)
T 2pnn_A          209 YNEILILGAKL  219 (273)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHhhhhc
Confidence            66777787775

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.65  E-value=1.8e-16  Score=145.74  Aligned_cols=122  Identities=18%  Similarity=0.120  Sum_probs=99.9

Q ss_pred             HHHHHHH---HcCCHHHHHHHHHhhccC------CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------
Q psy7030          42 KKYLLSV---ERGDTATVRKCIKRAYRN------HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------  105 (377)
Q Consensus        42 ~~ll~Aa---~~g~~~~v~~LL~~~~~~------~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------  105 (377)
                      +.++.|+   +.|+.++++.|++.....      -+.+.+.+|..|+||||+|+..|+.+++++|+++|++++       
T Consensus        48 t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~  127 (260)
T 3jxi_A           48 TCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRF  127 (260)
T ss_dssp             CHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECC
T ss_pred             cHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccc
Confidence            4577788   789999999999971000      013345567799999999999999999999999997653       


Q ss_pred             --------------hHHHHHHhcCCHHHHHHHHh---cCCccCCCCCCCCCCCCccccccCh---------HHHHHhhhh
Q psy7030         106 --------------DALLQAINSEFVEAVELLLE---YEEIVHKEGEPYLSRKPPKSCQNTA---------YRILLLLVS  159 (377)
Q Consensus       106 --------------tpLh~A~~~g~~eiv~~Ll~---~~~~~~~~~~~~~~t~lh~ac~~n~---------~~~l~~L~s  159 (377)
                                    ||||+|+..|+.+++++|++   +|++++..+ ..|+||||+||..++         .+++..|.+
T Consensus       128 ~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d-~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~  206 (260)
T 3jxi_A          128 FQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQD-SRGNTVLHALVAIADNTRENTKFVTKMYDLLLI  206 (260)
T ss_dssp             CSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC-TTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH
T ss_pred             cCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccC-CCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH
Confidence                          89999999999999999999   999998764 889999999996544         466677777


Q ss_pred             hhHHH
Q psy7030         160 QRADV  164 (377)
Q Consensus       160 ~~~~~  164 (377)
                      +|++.
T Consensus       207 ~ga~~  211 (260)
T 3jxi_A          207 KCAKL  211 (260)
T ss_dssp             HHHHH
T ss_pred             hCccc
Confidence            88775

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.65  E-value=1.4e-16  Score=154.09  Aligned_cols=120  Identities=17%  Similarity=0.143  Sum_probs=106.2

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-----hHHHHHHhc
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-----DALLQAINS  114 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-----tpLh~A~~~  114 (377)
                      ..+.|+.||..|+.++++.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++     ||||+|+..
T Consensus        20 g~t~L~~Aa~~g~~~~v~~Ll~~-----g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~   94 (364)
T 3ljn_A           20 NMEKIHVAARKGQTDEVRRLIET-----GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMA   94 (364)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHT
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHc-----CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHc
Confidence            46779999999999999999997     99999999999999999999999999999999998765     999999999


Q ss_pred             CCHHHHHHHHhc----CCccCC----------------CCCCCCCCCCccccccC--hHHHHHhhhhhhHHH
Q psy7030         115 EFVEAVELLLEY----EEIVHK----------------EGEPYLSRKPPKSCQNT--AYRILLLLVSQRADV  164 (377)
Q Consensus       115 g~~eiv~~Ll~~----~~~~~~----------------~~~~~~~t~lh~ac~~n--~~~~l~~L~s~~~~~  164 (377)
                      |+.+++++|+++    |++++.                ..+..|.||||.||..+  +.+++..|.++|++.
T Consensus        95 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~  166 (364)
T 3ljn_A           95 NKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP  166 (364)
T ss_dssp             TCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT
T ss_pred             CCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC
Confidence            999999999999    666543                02357899999999999  899997777666553

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.64  E-value=1.2e-16  Score=149.55  Aligned_cols=114  Identities=25%  Similarity=0.292  Sum_probs=97.4

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCc--ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CcC---------------
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHID--INCVDPLGRSALTLAIEGENLEMTELLIVMGV-EPK---------------  105 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~d--vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga-~i~---------------  105 (377)
                      ++.|+..|+.+.++.+++.     +.+  +|.+|.+|+||||+|+..|+.+++++|+++|+ +++               
T Consensus        80 l~~a~~~~~~~~~~~l~~~-----~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~  154 (276)
T 4hbd_A           80 AHPELVRRHLVTFRAMSAR-----LLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTAL  154 (276)
T ss_dssp             CCHHHHHHHHHHHHHHCHH-----HHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGG
T ss_pred             CCHHHHHHHHHHHHHHHHH-----HHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHH
Confidence            4559999999999999987     555  89999999999999999999999999999987 331               


Q ss_pred             ------------------------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHH
Q psy7030         106 ------------------------------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILL  155 (377)
Q Consensus       106 ------------------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~  155 (377)
                                                    ||||+|+..|+.+++++|+++|++++..+ ..|+||||+||..++.+++.
T Consensus       155 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d-~~G~TpLh~A~~~g~~~iv~  233 (276)
T 4hbd_A          155 ATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQD-DDGSTALMCACEHGHKEIAG  233 (276)
T ss_dssp             CCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHHHHHHHTCHHHHH
T ss_pred             HHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC-CCCCCHHHHHHHCCCHHHHH
Confidence                                          88888889999999999999999888654 78899999999988888886


Q ss_pred             hhhh-hhHH
Q psy7030         156 LLVS-QRAD  163 (377)
Q Consensus       156 ~L~s-~~~~  163 (377)
                      .|.+ ++++
T Consensus       234 ~Ll~~~gad  242 (276)
T 4hbd_A          234 LLLAVPSCD  242 (276)
T ss_dssp             HHHTSTTCC
T ss_pred             HHHhcCCCC
Confidence            6665 5544

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.64  E-value=8.5e-16  Score=146.20  Aligned_cols=101  Identities=20%  Similarity=0.098  Sum_probs=89.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        60 t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~  134 (351)
T 3utm_A           60 TPLHLAAGYNRVRIVQLLLQH-----GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASK  134 (351)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-----CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence            468889999999999999997     99999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCcccccc
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQN  148 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~  148 (377)
                      |+.+++++|+++|++++..+ ..|.+++|.++..
T Consensus       135 ~~~~~v~~Ll~~g~~~~~~~-~~g~~~l~~a~~~  167 (351)
T 3utm_A          135 NRVEVCSLLLSHGADPTLVN-CHGKSAVDMAPTP  167 (351)
T ss_dssp             TCHHHHHHHHHTTCCTTCCC-TTSCCHHHHCSSH
T ss_pred             CCHHHHHHHHHcCCCCcccc-CCCCcchHHHhhh
Confidence            99999999999999987543 5555665555443

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.62  E-value=6.3e-16  Score=150.69  Aligned_cols=116  Identities=14%  Similarity=0.167  Sum_probs=102.6

Q ss_pred             HHHHHHHHcC---CHHHHHHHHHhhccCCCCcccc--------cCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCcC----
Q psy7030          42 KKYLLSVERG---DTATVRKCIKRAYRNHHIDINC--------VDPLGRSALTLAIEGENLEMTELLIVMG-VEPK----  105 (377)
Q Consensus        42 ~~ll~Aa~~g---~~~~v~~LL~~~~~~~g~dvn~--------~D~~G~TpLh~A~~~g~~~iv~~Ll~~g-a~i~----  105 (377)
                      +.++.|+..|   +.++++.|++.     |+++|.        +|..|+||||+|+..|+.+++++|+++| ++++    
T Consensus       237 t~L~~A~~~~~~~~~~~v~~Ll~~-----g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~  311 (373)
T 2fo1_E          237 TALMIVAHNEGRDQVASAKLLVEK-----GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDE  311 (373)
T ss_dssp             CHHHHHHHSCSTTHHHHHHHHHHH-----TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCT
T ss_pred             CHHHHHHHhCCcchHHHHHHHHHC-----CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCC
Confidence            4577788888   88999999997     888886        6789999999999999999999999875 7775    


Q ss_pred             ---hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         106 ---DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       106 ---tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                         ||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++..|.+++.+
T Consensus       312 ~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d-~~g~t~l~~A~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          312 DGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD-ATDHTARQLAQANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-SSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCccCCC-CCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence               99999999999999999999999998764 7899999999999999999888777654

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.62  E-value=2.3e-16  Score=143.78  Aligned_cols=108  Identities=11%  Similarity=0.041  Sum_probs=94.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHH--
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQA--  111 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A--  111 (377)
                      +.++.||..|+.++++.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++        ||||+|  
T Consensus        56 tpLh~A~~~g~~~~v~~Ll~~-----ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a  130 (229)
T 2vge_A           56 TALHNAICGANYSIVDFLITA-----GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDP  130 (229)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCT
T ss_pred             CHHHHHHHcCCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHH
Confidence            457889999999999999997     99999999999999999999999999999999998875        999999  


Q ss_pred             HhcCCHHHHHHHHhcCCccCCC-------------------------------CCCCCCCCCccccccChHHHH
Q psy7030         112 INSEFVEAVELLLEYEEIVHKE-------------------------------GEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~~~~~~~~~-------------------------------~~~~~~t~lh~ac~~n~~~~l  154 (377)
                      +..|+.+++++|+++|++++..                               .+..|+||||+||..++.+++
T Consensus       131 ~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v  204 (229)
T 2vge_A          131 YREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYV  204 (229)
T ss_dssp             TSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEE
T ss_pred             HhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCCccee
Confidence            9999999999999988776532                               134577888888887766655

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.61  E-value=1.1e-15  Score=137.54  Aligned_cols=112  Identities=19%  Similarity=0.195  Sum_probs=51.3

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      ++.|+..|+.++++.|++.     |++++.+|..|+||||+|+..|+.++++.|+++|++++       ||||+|+..++
T Consensus        80 L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~  154 (240)
T 3eu9_A           80 LHWATRQGHLSMVVQLMKY-----GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH  154 (240)
T ss_dssp             HHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred             hHHHHHcCCHHHHHHHHHc-----CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Confidence            4444444444444444443     44444444444444444444444444444444444432       44444443332


Q ss_pred             -HHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         117 -VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       117 -~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                       .+++++|++.|++++..+...|.||||.||..++.+++..|.++
T Consensus       155 ~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  199 (240)
T 3eu9_A          155 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA  199 (240)
T ss_dssp             SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             hHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc
Confidence             44444444444444433322444555555555555544444433

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.61  E-value=1.8e-16  Score=151.85  Aligned_cols=120  Identities=15%  Similarity=0.068  Sum_probs=100.1

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCC---HHHHHHHHhCC-CCcC-------hHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN---LEMTELLIVMG-VEPK-------DALL  109 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~---~~iv~~Ll~~g-a~i~-------tpLh  109 (377)
                      .+.|+.||..|+.++++.||+.     |+|+|.+|..|+||||+|+..|+   .++++.|++.+ ++++       ||||
T Consensus       132 ~TpLh~Aa~~g~~~~v~~Ll~~-----Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh  206 (327)
T 1sw6_A          132 NTPLHWLTSIANLELVKHLVKH-----GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILH  206 (327)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT-----TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHH
T ss_pred             CcHHHHHHHcCCHHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHH
Confidence            4568889999999999999997     99999999999999999999998   67777777765 4443       9999


Q ss_pred             HHHh----cCCHHHHHHHHhcCC---------------------------------------------ccCCCCCCCCCC
Q psy7030         110 QAIN----SEFVEAVELLLEYEE---------------------------------------------IVHKEGEPYLSR  140 (377)
Q Consensus       110 ~A~~----~g~~eiv~~Ll~~~~---------------------------------------------~~~~~~~~~~~t  140 (377)
                      +|+.    .|+.++++.|++.++                                             +++.. +..|+|
T Consensus       207 ~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~-d~~G~T  285 (327)
T 1sw6_A          207 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQ-DSNGDT  285 (327)
T ss_dssp             HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCC-CTTSCC
T ss_pred             HHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCC-CCCCCC
Confidence            9999    899999999988743                                             34443 378999


Q ss_pred             CCccccccChHHHHHhhhhhhHHHHH
Q psy7030         141 KPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       141 ~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      |||+||..++.+++..|.++|++...
T Consensus       286 pLh~A~~~g~~~~v~~Ll~~Gad~~~  311 (327)
T 1sw6_A          286 CLNIAARLGNISIVDALLDYGADPFI  311 (327)
T ss_dssp             HHHHHHHHCCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence            99999999999999888877776543

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.61  E-value=1.1e-15  Score=145.07  Aligned_cols=98  Identities=18%  Similarity=0.030  Sum_probs=85.4

Q ss_pred             HHHHHHHHHc---CCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHH
Q psy7030          41 EKKYLLSVER---GDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQ  110 (377)
Q Consensus        41 e~~ll~Aa~~---g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~  110 (377)
                      .+.|+.|+..   |+.++++.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+
T Consensus       191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~-----gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~  265 (301)
T 2b0o_E          191 ELVLHLAVKVANQASLPLVDFIIQN-----GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDI  265 (301)
T ss_dssp             ECHHHHHHHTCCTTTHHHHHHHHHH-----SSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHH
T ss_pred             ccHHHHHHHhcccCcHHHHHHHHhc-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence            4568889987   899999999998     99999999999999999999999999999999999986       99999


Q ss_pred             HHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccCh
Q psy7030         111 AINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTA  150 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~  150 (377)
                      |+..|+.+++++|+++|++       .|.||||+|+..+.
T Consensus       266 A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~  298 (301)
T 2b0o_E          266 ARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI  298 (301)
T ss_dssp             HHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred             HHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence            9999999999999999885       47899999998653

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.61  E-value=1e-15  Score=127.24  Aligned_cols=97  Identities=26%  Similarity=0.299  Sum_probs=85.6

Q ss_pred             CCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCC
Q psy7030          68 HIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSR  140 (377)
Q Consensus        68 g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t  140 (377)
                      |+|+ .+|..|+||||+|+..|+.++++.|+++|++++       ||||+|+..|+.+++++|+++|++++..+ ..|.|
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t   78 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTG-YQNDS   78 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-GGGCC
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcC-CCCCC
Confidence            6777 789999999999999999999999999999875       99999999999999999999999998754 78999


Q ss_pred             CCccccccChHHHHHhhhhhhHHHHH
Q psy7030         141 KPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       141 ~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      |||.||..++.+++..|.+++++...
T Consensus        79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~  104 (137)
T 3c5r_A           79 PLHDAAKNGHVDIVKLLLSYGASRNA  104 (137)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            99999999999999877777766443

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.61  E-value=1.4e-15  Score=145.43  Aligned_cols=117  Identities=21%  Similarity=0.269  Sum_probs=96.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCcC-------hHHHH
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN----LEMTELLIVMGVEPK-------DALLQ  110 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~----~~iv~~Ll~~ga~i~-------tpLh~  110 (377)
                      +.|+.|++.|+.++++.||++    .|+|+|.+|..|+||+|.++..++    .+++++|+++|++++       ||||+
T Consensus       170 T~L~~A~~~g~~~~v~~LL~~----~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~  245 (337)
T 4g8k_A          170 TALMDAAEKGHVEVLKILLDE----MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLIL  245 (337)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHH----SCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHH
T ss_pred             cHHHHHHHCCCHHHHHHHHhc----cCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence            358889999999999999975    388899889899999888766544    457888888888876       89999


Q ss_pred             HHhcCCHHHHHHHHhc-CCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHH
Q psy7030         111 AINSEFVEAVELLLEY-EEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~-~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      |+..|+.++++.|++. |++++..+ ..|+||||+||..++.+++..|.++|++
T Consensus       246 a~~~~~~~~v~~Ll~~~~~~vn~~d-~~G~TpL~~A~~~g~~~iv~~Ll~~GAd  298 (337)
T 4g8k_A          246 AVEKKHLGLVQRLLEQEHIEINDTD-SDGKTALLLAVELKLKKIAELLCKRGAS  298 (337)
T ss_dssp             HHHTTCHHHHHHHHTSTTCCTTCBC-TTSCBHHHHHHHTTCHHHHHHHHTTSCS
T ss_pred             HHHhhhhHHHHHHHHhcCCcccCcC-CCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence            9999999998888875 67777654 7888999999988888888777766655

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.59  E-value=1.4e-15  Score=122.46  Aligned_cols=93  Identities=23%  Similarity=0.157  Sum_probs=85.5

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccc
Q psy7030          73 CVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKS  145 (377)
Q Consensus        73 ~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~a  145 (377)
                      .+|++|+||||+|+..|+.++++.|+++|++++       ||||+|+..|+.+++++|+++|++++..+ ..|.||||.|
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d-~~g~tpl~~A   82 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS-KDGNTPEHLA   82 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCC-TTCCCTTHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccC-CCCCCHHHHH
Confidence            478999999999999999999999999999886       99999999999999999999999998764 7899999999


Q ss_pred             cccChHHHHHhhhhhhHHHHH
Q psy7030         146 CQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       146 c~~n~~~~l~~L~s~~~~~~l  166 (377)
                      +..++.+++..|.++|++.+.
T Consensus        83 ~~~~~~~~~~~Ll~~ga~~n~  103 (115)
T 2l6b_A           83 KKNGHHEIVKLLDAKGADVNA  103 (115)
T ss_dssp             HTTTCHHHHHHHHTTSSSHHH
T ss_pred             HHCCCHHHHHHHHHcCCCCCc
Confidence            999999999888888877654

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.58  E-value=2.5e-15  Score=146.45  Aligned_cols=115  Identities=20%  Similarity=0.153  Sum_probs=102.9

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCC---CCcC-------hHHHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG---VEPK-------DALLQ  110 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~g---a~i~-------tpLh~  110 (377)
                      .+.|+.|+..|+.++++.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|   ++++       ||||+
T Consensus       167 ~TpL~~A~~~g~~~iv~~Ll~~-----ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~  241 (373)
T 2fo1_E          167 NTPLMLAVLARRRRLVAYLMKA-----GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMI  241 (373)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHT-----TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHH
T ss_pred             CCHHHHHHHcChHHHHHHHHHC-----CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHH
Confidence            3568889999999999999997     9999999999999999999999999999999987   5554       99999


Q ss_pred             HHhcC---CHHHHHHHHhcCCccCCC-------CCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         111 AINSE---FVEAVELLLEYEEIVHKE-------GEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       111 A~~~g---~~eiv~~Ll~~~~~~~~~-------~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      |+..+   +.+++++|+++|++++..       .+..|.||||.||..++.+++..|.++
T Consensus       242 A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~  301 (373)
T 2fo1_E          242 VAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE  301 (373)
T ss_dssp             HHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH
T ss_pred             HHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh
Confidence            99998   899999999999998752       346899999999999999999766644

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.58  E-value=2.9e-16  Score=153.88  Aligned_cols=118  Identities=11%  Similarity=0.037  Sum_probs=98.2

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCc---ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-----cC----hHH
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHID---INCVDPLGRSALTLAIEGENLEMTELLIVMGVE-----PK----DAL  108 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~d---vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~-----i~----tpL  108 (377)
                      ++.++.||+.|+.++++.|++.     |+.   .+..|..|+||||+|+.+||.+++++|+++|++     ++    |||
T Consensus        93 ~T~Lh~Aa~~G~~e~v~~Ll~~-----ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpL  167 (376)
T 2aja_A           93 EVICFVAAITGCSSALDTLCLL-----LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAF  167 (376)
T ss_dssp             HHHHHHHHHHCCHHHHHHHTTC-------CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHc-----CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHH
Confidence            5789999999999999999987     662   234456788999999999999999999999975     32    899


Q ss_pred             HHHHhcCCHHHHHHHHhcCCccCC-CCCCCCCCCCcccc-ccChHHHHHhhhhhhHH
Q psy7030         109 LQAINSEFVEAVELLLEYEEIVHK-EGEPYLSRKPPKSC-QNTAYRILLLLVSQRAD  163 (377)
Q Consensus       109 h~A~~~g~~eiv~~Ll~~~~~~~~-~~~~~~~t~lh~ac-~~n~~~~l~~L~s~~~~  163 (377)
                      |+|+..|+.+++++|+++|++++. ..+..|.||||.|| ..|+.+++..|.+++..
T Consensus       168 h~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~  224 (376)
T 2aja_A          168 RLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM  224 (376)
T ss_dssp             HHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred             HHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence            999999999999999999998764 12256899999999 99999999777766643

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.58  E-value=1.2e-14  Score=116.75  Aligned_cols=80  Identities=26%  Similarity=0.324  Sum_probs=74.8

Q ss_pred             HhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHH
Q psy7030          39 LEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQA  111 (377)
Q Consensus        39 ~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A  111 (377)
                      +..+.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|
T Consensus        23 ~g~t~L~~A~~~g~~~~v~~Ll~~-----g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A   97 (110)
T 2zgd_A           23 DLGKKLLEAARAGQDDEVRILMAN-----GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS   97 (110)
T ss_dssp             CHHHHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHc-----CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence            356779999999999999999997     99999999999999999999999999999999999886       999999


Q ss_pred             HhcCCHHHHHHH
Q psy7030         112 INSEFVEAVELL  123 (377)
Q Consensus       112 ~~~g~~eiv~~L  123 (377)
                      +..|+.+++++|
T Consensus        98 ~~~~~~~~~~~L  109 (110)
T 2zgd_A           98 IDNGNEDLAEIL  109 (110)
T ss_dssp             HHHTCHHHHHHH
T ss_pred             HHcCCHHHHHHh
Confidence            999999999987

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.57  E-value=7.8e-15  Score=121.88  Aligned_cols=81  Identities=26%  Similarity=0.350  Sum_probs=76.4

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        49 t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~  123 (136)
T 2jab_A           49 TPLYLATAHGHLEIVEVLLKN-----GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGN  123 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CHHHHHHHcCCHHHHHHHHHc-----CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHC
Confidence            458889999999999999997     99999999999999999999999999999999999885       999999999


Q ss_pred             CCHHHHHHHHhcC
Q psy7030         115 EFVEAVELLLEYE  127 (377)
Q Consensus       115 g~~eiv~~Ll~~~  127 (377)
                      |+.+++++|+++|
T Consensus       124 ~~~~~~~~Ll~~G  136 (136)
T 2jab_A          124 GNEDLAEILQKLN  136 (136)
T ss_dssp             TCHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHcC
Confidence            9999999999876

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.57  E-value=2.9e-15  Score=127.50  Aligned_cols=90  Identities=12%  Similarity=0.020  Sum_probs=72.2

Q ss_pred             HHHcCCHHHHHHHHHhhccCCCCcccccCCCCCc-HHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHH
Q psy7030          47 SVERGDTATVRKCIKRAYRNHHIDINCVDPLGRS-ALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVE  118 (377)
Q Consensus        47 Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~T-pLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~e  118 (377)
                      | ..|+.++++.|++.     |+++|.+|..|+| |||+|+..|+.+++++|+++|++++       ||||+|+..|+.+
T Consensus        52 A-~~~~~~~v~~Ll~~-----g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~  125 (156)
T 1bi7_B           52 M-MMGSARVAELLLLH-----GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD  125 (156)
T ss_dssp             S-CTTCHHHHHHHHTT-----TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred             H-HcCCHHHHHHHHHc-----CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHH
Confidence            5 48999999999997     9999999999999 9999999999999999999999886       9999999999999


Q ss_pred             HHHHHHhcCCccCCCCCCCCCCCCc
Q psy7030         119 AVELLLEYEEIVHKEGEPYLSRKPP  143 (377)
Q Consensus       119 iv~~Ll~~~~~~~~~~~~~~~t~lh  143 (377)
                      ++++|+++|++++..+ ..|.|+.+
T Consensus       126 ~v~~Ll~~ga~~~~~~-~~g~t~~~  149 (156)
T 1bi7_B          126 VARYLRAAAGGTRGSN-HARIDAAE  149 (156)
T ss_dssp             HHHHHSSCC----------------
T ss_pred             HHHHHHHcCCCCCccC-cCcCcccc
Confidence            9999999999998653 66777654

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.56  E-value=1.4e-14  Score=117.35  Aligned_cols=83  Identities=29%  Similarity=0.402  Sum_probs=78.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |++++.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..
T Consensus        37 t~L~~A~~~~~~~~~~~Ll~~-----g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~  111 (126)
T 1n0r_A           37 TPLHLAARNGHLEVVKLLLEA-----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN  111 (126)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             cHHHHHHHcCcHHHHHHHHHc-----CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence            457889999999999999997     99999999999999999999999999999999999875       999999999


Q ss_pred             CCHHHHHHHHhcCCc
Q psy7030         115 EFVEAVELLLEYEEI  129 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~  129 (377)
                      |+.+++++|+++|++
T Consensus       112 ~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A          112 GHLEVVKLLLEAGAY  126 (126)
T ss_dssp             TCHHHHHHHHHHTCC
T ss_pred             CcHHHHHHHHHcCCC
Confidence            999999999999985

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.56  E-value=7.5e-15  Score=121.99  Aligned_cols=79  Identities=14%  Similarity=0.069  Sum_probs=75.1

Q ss_pred             HHHHHcCCHHHHHHHHHhhccCCCCcccccCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          45 LLSVERGDTATVRKCIKRAYRNHHIDINCVDPL-GRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        45 l~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~-G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      +.|+. |+.++++.|++.     |+|+|.+|.. |+||||+|+..|+.+++++|+++|++++       ||||+|+..|+
T Consensus        50 ~~A~~-~~~~~v~~Ll~~-----g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~  123 (136)
T 1d9s_A           50 QVMMM-GSAQVAELLLLH-----GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGH  123 (136)
T ss_dssp             TTSTT-SCHHHHHHHHHH-----TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTC
T ss_pred             HHHHc-CCHHHHHHHHHC-----CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence            33999 999999999998     9999999999 9999999999999999999999999886       99999999999


Q ss_pred             HHHHHHHHhcCCc
Q psy7030         117 VEAVELLLEYEEI  129 (377)
Q Consensus       117 ~eiv~~Ll~~~~~  129 (377)
                      .+++++|+++|++
T Consensus       124 ~~~~~~Ll~~Gad  136 (136)
T 1d9s_A          124 RDIARYLHAATGD  136 (136)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHcCCC
Confidence            9999999999875

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.53  E-value=1.7e-14  Score=135.36  Aligned_cols=85  Identities=19%  Similarity=0.084  Sum_probs=80.4

Q ss_pred             HHHHHHHHHc---CCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHH
Q psy7030          41 EKKYLLSVER---GDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQ  110 (377)
Q Consensus        41 e~~ll~Aa~~---g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~  110 (377)
                      .+.++.|+..   |+.++++.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+
T Consensus       170 ~t~Lh~A~~~~~~~~~~~v~~Ll~~-----ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~  244 (278)
T 1dcq_A          170 ETALHLAVRSVDRTSLHIVDFLVQN-----SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI  244 (278)
T ss_dssp             CBHHHHHHHHCCTTTHHHHHHHHHH-----CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             CCcchHHHHhcccchHHHHHHHHHC-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH
Confidence            4568889999   899999999998     99999999999999999999999999999999999986       99999


Q ss_pred             HHhcCCHHHHHHHHhcCCcc
Q psy7030         111 AINSEFVEAVELLLEYEEIV  130 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~  130 (377)
                      |+..|+.+++++|+++|++.
T Consensus       245 A~~~~~~~~v~~Ll~~ga~~  264 (278)
T 1dcq_A          245 AKRLKHEHCEELLTQALSGR  264 (278)
T ss_dssp             HHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHcCCHHHHHHHHHcCCCC
Confidence            99999999999999998853

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.52  E-value=1.3e-14  Score=116.51  Aligned_cols=86  Identities=19%  Similarity=0.107  Sum_probs=75.6

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCc
Q psy7030          71 INCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPP  143 (377)
Q Consensus        71 vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh  143 (377)
                      .+..|.+|+||||+|+..|+.++++.|+++|++++       ||||+|+..|+.+++++|+++|++++..+ ..|+||||
T Consensus        17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d-~~g~tpl~   95 (110)
T 2zgd_A           17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD-KFGKTAFD   95 (110)
T ss_dssp             -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred             ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cCCCcHHH
Confidence            44578899999999999999999999999999885       99999999999999999999999998764 78999999


Q ss_pred             cccccChHHHHHhh
Q psy7030         144 KSCQNTAYRILLLL  157 (377)
Q Consensus       144 ~ac~~n~~~~l~~L  157 (377)
                      +||..++.+++..|
T Consensus        96 ~A~~~~~~~~~~~L  109 (110)
T 2zgd_A           96 ISIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHHTCHHHHHHH
T ss_pred             HHHHcCCHHHHHHh
Confidence            99999999887554

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.50  E-value=6e-15  Score=141.25  Aligned_cols=113  Identities=17%  Similarity=0.131  Sum_probs=93.8

Q ss_pred             HHHHHcCCHHHHHHHHHhhccCCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          45 LLSVERGDTATVRKCIKRAYRNHHIDINC-VDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        45 l~Aa~~g~~~~v~~LL~~~~~~~g~dvn~-~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      +.|+..+..++++.|++.     |+|+|. +|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..|+
T Consensus       102 ~~a~~~~~~~~~~~l~~~-----g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~  176 (327)
T 1sw6_A          102 HVSFDSLLQEVNDAFPNT-----QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN  176 (327)
T ss_dssp             --CHHHHHHHHHHHCTTS-----CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred             HHHHHhhHHHHHHHHHhc-----CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcc
Confidence            345555666677777765     999999 89999999999999999999999999999986       99999999998


Q ss_pred             ---HHHHHHHHhcC-CccCCCCCCCCCCCCccccc----cChHHHHHhhhhhhHH
Q psy7030         117 ---VEAVELLLEYE-EIVHKEGEPYLSRKPPKSCQ----NTAYRILLLLVSQRAD  163 (377)
Q Consensus       117 ---~eiv~~Ll~~~-~~~~~~~~~~~~t~lh~ac~----~n~~~~l~~L~s~~~~  163 (377)
                         .++++.|++.+ ++++.. +..|+||||+||.    .+..+++..|.+.+..
T Consensus       177 ~~~~~~~~~ll~~~~~~~~~~-d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~  230 (327)
T 1sw6_A          177 NYDSGTFEALLDYLYPCLILE-DSMNRTILHHIIITSGMTGCSAAAKYYLDILMG  230 (327)
T ss_dssp             HHHTTCHHHHHHHHGGGGGEE-CTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHhhhccccCC-CCCCCCHHHHHHHHccccccHHHHHHHHHHHHH
Confidence               68888888876 666654 4889999999998    7888888777655443

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.50  E-value=2.9e-14  Score=116.21  Aligned_cols=90  Identities=16%  Similarity=0.148  Sum_probs=79.2

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCcccc
Q psy7030          74 VDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSC  146 (377)
Q Consensus        74 ~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac  146 (377)
                      .+..|.||||.|+..|+.++++.|+++|++++       ||||+|+..|+.+++++|+++|++++..+ ..|+||||+||
T Consensus         3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~tpL~~A~   81 (123)
T 3aaa_C            3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD-KHHITPLLSAV   81 (123)
T ss_dssp             ----CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCC-TTSCCHHHHHH
T ss_pred             cccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC-CCCCCHHHHHH
Confidence            35678999999999999999999999998886       99999999999999999999999998764 78999999999


Q ss_pred             ccChHHHHHhhhhhhHHH
Q psy7030         147 QNTAYRILLLLVSQRADV  164 (377)
Q Consensus       147 ~~n~~~~l~~L~s~~~~~  164 (377)
                      ..++.+++..|.+++++.
T Consensus        82 ~~~~~~~v~~Ll~~ga~~   99 (123)
T 3aaa_C           82 YEGHVSCVKLLLSKGADK   99 (123)
T ss_dssp             HHTCHHHHHHHHHTTCCT
T ss_pred             HcCCHHHHHHHHHcCCCC
Confidence            999999998777666553

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.50  E-value=5.1e-15  Score=144.99  Aligned_cols=113  Identities=12%  Similarity=0.090  Sum_probs=97.7

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCc---ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc-----C----hH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHID---INCVDPLGRSALTLAIEGENLEMTELLIVMGVEP-----K----DA  107 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~d---vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i-----~----tp  107 (377)
                      .++.++.||+.|+.++|+.|++.     |+|   ++..+.+ +||||+|+.+||.+++++|+++|+++     +    ||
T Consensus       128 ~~tpL~~Aa~~G~~eiv~~Ll~~-----gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~Tp  201 (376)
T 2aja_A          128 NYQAFRLAAENGHLHVLNRLCEL-----APTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA  201 (376)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHS-----CTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHcCCHHHHHHHHhC-----CCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCH
Confidence            45689999999999999999997     865   2322333 99999999999999999999999983     3    99


Q ss_pred             HHHHH-hcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         108 LLQAI-NSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       108 Lh~A~-~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      ||+|+ ..|+.+++++|+++|++        |.||+|.|+..|+.+++..|.+++.+...
T Consensus       202 L~~Aa~~~G~~eiv~~Ll~~ga~--------~~taL~~Aa~~g~~evv~lL~~~ga~~~~  253 (376)
T 2aja_A          202 FRWAAVGRGHHNVINFLLDCPVM--------LAYAEIHEFEYGEKYVNPFIARHVNRLKE  253 (376)
T ss_dssp             HHHHHSTTCCHHHHHHHTTSHHH--------HHHHHHCTTTTTTTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHhCCCc--------cchHHHHHHHCCCHHHHHHHHhcCccccc
Confidence            99999 99999999999998752        78999999999999999888888877654

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.46  E-value=1.5e-15  Score=132.96  Aligned_cols=90  Identities=16%  Similarity=-0.004  Sum_probs=82.1

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCcccc
Q psy7030          74 VDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSC  146 (377)
Q Consensus        74 ~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac  146 (377)
                      .|..|+||||.|+..|+.++++.|++ |++++       ||||+|+..|+.+++++|+++|++++..++..|+||||.||
T Consensus        40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~  118 (183)
T 3deo_A           40 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA  118 (183)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence            45689999999999999999999999 88776       99999999999999999999999999876688999999999


Q ss_pred             ccChHHHHHhhhhhhHHH
Q psy7030         147 QNTAYRILLLLVSQRADV  164 (377)
Q Consensus       147 ~~n~~~~l~~L~s~~~~~  164 (377)
                      ..++.+++..|.++|++.
T Consensus       119 ~~~~~~~v~~Ll~~ga~~  136 (183)
T 3deo_A          119 GYVRPEVVEALVELGADI  136 (183)
T ss_dssp             HTTCHHHHHHHHHHTCCT
T ss_pred             hcCcHHHHHHHHHcCCCC
Confidence            999999998887776654

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.41  E-value=7e-14  Score=125.64  Aligned_cols=92  Identities=16%  Similarity=0.058  Sum_probs=82.9

Q ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhc-CCccCCCCCCCCCCCCc
Q psy7030          72 NCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEY-EEIVHKEGEPYLSRKPP  143 (377)
Q Consensus        72 n~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~-~~~~~~~~~~~~~t~lh  143 (377)
                      +..|..|+||||+|+..|+.++++.|+++|++++       ||||+|+..|+.+++++|+++ |++++..+ ..|+||||
T Consensus        67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d-~~g~tpL~  145 (222)
T 3ehr_A           67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQN-KLGDTALH  145 (222)
T ss_dssp             HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCC-TTSCCHHH
T ss_pred             cccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccC-CCCCCHHH
Confidence            3456788999999999999999999999999886       999999999999999999999 99998754 88999999


Q ss_pred             cccccChHHHHHhhhhhhHHH
Q psy7030         144 KSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       144 ~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      +||..++.+++..|.++|++.
T Consensus       146 ~A~~~~~~~~v~~Ll~~ga~~  166 (222)
T 3ehr_A          146 AAAWKGYADIVQLLLAKGART  166 (222)
T ss_dssp             HHHHHTCHHHHHHHHHHTCCS
T ss_pred             HHHHcCCHHHHHHHHHcCCCC
Confidence            999999999998887776653

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.40  E-value=4.7e-13  Score=130.64  Aligned_cols=100  Identities=15%  Similarity=0.101  Sum_probs=78.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.|+.|+..|+.++++.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+.
T Consensus       236 ~TpLh~Aa~~g~~~iv~~LL~~-----Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~  310 (368)
T 3jue_A          236 ATPLIQATAANSLLACEFLLQN-----GANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAME  310 (368)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHCCCHHHHHHHHHc-----CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHH
Confidence            4578999999999999999997     99999999999999999999999999999999999886       99999999


Q ss_pred             cCCHHHHHHHHhcCCccC--CCCCCCCCCCCccc
Q psy7030         114 SEFVEAVELLLEYEEIVH--KEGEPYLSRKPPKS  145 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~--~~~~~~~~t~lh~a  145 (377)
                      .|+.+++++|+..+....  ..++..+.|+++..
T Consensus       311 ~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~  344 (368)
T 3jue_A          311 TANADIVTLLRLAKMREAEAAQGQAGDETYLDIF  344 (368)
T ss_dssp             TTCHHHHHHHHHHHC-------------------
T ss_pred             CCCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence            999999999998764332  12234455666543

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.33  E-value=1.5e-12  Score=119.20  Aligned_cols=94  Identities=19%  Similarity=0.118  Sum_probs=75.2

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVD-PLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D-~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      +.|+.||..|+.++++.||+.     |+|+|.+| ..|+||||+|+..|+.+++++|+++|++++       ||||+|+.
T Consensus        79 t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~  153 (244)
T 3ui2_A           79 TALLFVAGLGSDKCVRLLAEA-----GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE  153 (244)
T ss_dssp             BHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHHc-----CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence            468889999999999999997     99999998 889999999999999999999999999986       88888874


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      .++                  ...+.+++|+|+..+..+++..|.
T Consensus       154 ~~~------------------~~~~~~~l~~a~~~g~~~iv~~L~  180 (244)
T 3ui2_A          154 ILK------------------TTPKGNPMQFGRRIGLEKVINVLE  180 (244)
T ss_dssp             HHT------------------TCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             HHh------------------ccCCCCHHHHHHHcChHHHHHHHH
Confidence            211                  133456666666665555554443

>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*

Probab=97.94  E-value=1.7e-05  Score=74.04  Aligned_cols=111  Identities=19%  Similarity=0.288  Sum_probs=87.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Q psy7030         187 SYLEYLVLLYVAGYIWEETCEVWKDGLYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNA  266 (377)
Q Consensus       187 ~~~e~~~~~~~~~~~~~Ei~~~~~~g~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~  266 (377)
                      .+.+++=.+.++.+.+|-+-+++..| ++|+++.||++|++.++.+++...                +            
T Consensus        61 ~~l~~~e~~~~~iF~~E~~lrl~~~~-~~y~~~~wn~~Dl~~v~~~~i~~~----------------~------------  111 (285)
T 3rvy_A           61 VYTTLFNQIVITIFTIEIILRIYVHR-ISFFKDPWSLFDFFVVAISLVPTS----------------S------------  111 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTG-GGGGGCHHHHHHHHHHHHHHSCSS----------------S------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHcCChHHhHHHHHHHHHHccc----------------c------------
Confidence            45666667777788999999999999 589999999999887655432100                0            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy7030         267 FDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLW  335 (377)
Q Consensus       267 ~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~  335 (377)
                               .+++.-++-.+|++++++.++.+..+..++.+...++..++++++++++.||+..+.+|.
T Consensus       112 ---------~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~~~~~l~~~~~~~~~~~~~fa~~g~~~f~  171 (285)
T 3rvy_A          112 ---------GFEILRVLRVLRLFRLVTAVPQMRKIVSALISVIPGMLSVIALMTLFFYIFAIMATQLFG  171 (285)
T ss_dssp             ---------SCTHHHHHGGGGGGHHHHSSTTHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence                     122334555678888999999999999999999999999999999999999998888775

>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}

Probab=97.65  E-value=5.3e-05  Score=68.30  Aligned_cols=114  Identities=12%  Similarity=0.140  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Q psy7030         188 YLEYLVLLYVAGYIWEETCEVWKDG-LYRYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNA  266 (377)
Q Consensus       188 ~~e~~~~~~~~~~~~~Ei~~~~~~g-~~~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~  266 (377)
                      +.+++=.++...+..|-+-+++..| +++|++++||++|++.+...++....               +            
T Consensus        43 ~l~~~e~~~~~iF~~E~~lri~~~~~~~~y~~~~wni~D~~~v~~~~i~~~~---------------~------------   95 (229)
T 4dxw_A           43 TIHLLDYGITIFFVIEILIRFIGEKQKADFFKSGWNIFDTVIVAISLIPIPN---------------N------------   95 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHC---------CHHHHHHHHHHHHTTCC-------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCchhHHhcCCcHHHHHHHHHHHHhhcCc---------------c------------
Confidence            3445555666777888888888764 57999999999998776654322100               0            


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q psy7030         267 FDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLWY  336 (377)
Q Consensus       267 ~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~~  336 (377)
                              ....+.-++-.+|++++.+.++.+..+..++.+..+++..+++++++++..||+.-..+|..
T Consensus        96 --------~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~s~~~l~~~~~~l~~~~~ifa~~g~~lf~~  157 (229)
T 4dxw_A           96 --------SSFLVLRLLRIFRVLRLISVIPELKQIIEAILESVRRVFFVSLLLFIILYIYATMGAILFGN  157 (229)
T ss_dssp             ------------CCTTHHHHHHTTHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence                    00111123455788889999999999999999999999999999999999999988888853

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*

Probab=96.82  E-value=0.0043  Score=62.63  Aligned_cols=50  Identities=12%  Similarity=0.183  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCc-cccccccchHHHHHHHHHHHHHHH
Q psy7030         188 YLEYLVLLYVAGYIWEETCEVWKDGL-YRYLKDMWNFIDFTRNLLYVLVFM  237 (377)
Q Consensus       188 ~~e~~~~~~~~~~~~~Ei~~~~~~g~-~~y~~~~WN~ld~~~l~l~~~~~~  237 (377)
                      ++.++=++..+.+++|-+-+++..+. ++|++++||++|+++++.+++.+.
T Consensus       240 ~l~~ie~i~~~iFtiE~ilR~~~~~~k~~Y~ks~wniiDli~iip~~i~l~  290 (514)
T 2r9r_B          240 PFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIF  290 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSSCSSSSTTSHHHHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHhchhHHHHHHHHHHHHHHHH
Confidence            44444455566677777888887764 399999999999988776655433

>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*

Probab=95.28  E-value=0.054  Score=51.58  Aligned_cols=112  Identities=13%  Similarity=0.119  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCcc-ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Q psy7030         188 YLEYLVLLYVAGYIWEETCEVWKDGLY-RYLKDMWNFIDFTRNLLYVLVFMLRAMAYVQQQAEIEANESSKFLGREHWNA  266 (377)
Q Consensus       188 ~~e~~~~~~~~~~~~~Ei~~~~~~g~~-~y~~~~WN~ld~~~l~l~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~w~~  266 (377)
                      .++++..+....+++|=+..++..+.+ .|++++||++|++++.+-+....     .          +.    .+     
T Consensus        40 ~~~~~~~~~~~~f~~e~~~r~~~~~~~~~~~~~~~~i~Dl~~i~~p~~~~~-----~----------~~----~~-----   95 (355)
T 3beh_A           40 ALAALLAVIWGAYLLQLAATLLKRRAGVVRDRTPKIAIDVLAVLVPLAAFL-----L----------DG----SP-----   95 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCCSCSSCCCHHHHHHHHHHHHHHHHHHH-----S----------CC----SG-----
T ss_pred             HHHHHHhHHHHHHHHHHHHhcccccccceeccCcchHHHHHHHHHHHHHHH-----h----------cc----ch-----
Confidence            345443333333455555555544432 58899999999887532221110     0          00    00     


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy7030         267 FDPQLIAEGLFAGANVFSALKLVHLFSINPHLGPLQISLGRMIIDIVKFFFIYTLVLLSFACGLNQLLW  335 (377)
Q Consensus       267 ~~~~~~~~~l~a~~~~l~~lrll~~~~~~~~~Gp~~~mi~~m~~dl~~F~~i~~vv~~aFava~~~L~~  335 (377)
                                  ..-++-.+|++++.|..+.+..+...+.+....+..++.+++++++.||+.++.+..
T Consensus        96 ------------~~r~lr~~R~lrl~r~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~a~~~~~~e~  152 (355)
T 3beh_A           96 ------------DWSLYCAVWLLKPLRDSTFFPVLGRVLANEARNLIGVTTLFGVVLFAVALAAYVIER  152 (355)
T ss_dssp             ------------GGGGGGGGGGSHHHHTCSSHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence                        001223456667777777666666666666677888888888888889988887765

>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A

Probab=88.44  E-value=3.9  Score=35.66  Aligned_cols=46  Identities=13%  Similarity=0.122  Sum_probs=23.8

Q ss_pred             HHHHHhHccCCCCchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Q psy7030         286 LKLVHLFSINPHLGPLQISLGRMII--DIVKFFFIYTLVLLSFACGLN  331 (377)
Q Consensus       286 lrll~~~~~~~~~Gp~~~mi~~m~~--dl~~F~~i~~vv~~aFava~~  331 (377)
                      +|+++.++..+........+.+..+  .+...+.++++++..++..++
T Consensus       105 lRllR~~r~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~  152 (223)
T 1orq_C          105 LRFLRILLIISRGSKFLSAIADAADKIRFYHLFGAVMLTVLYGAFAIY  152 (223)
T ss_dssp             HHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444454544444444445555543  355555555555556665544

>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1

Probab=83.73  E-value=1.1  Score=36.26  Aligned_cols=42  Identities=14%  Similarity=0.101  Sum_probs=26.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHc-CccccccccchHHHHHHHHHHHHH
Q psy7030         192 LVLLYVAGYIWEETCEVWKD-GLYRYLKDMWNFIDFTRNLLYVLV  235 (377)
Q Consensus       192 ~~~~~~~~~~~~Ei~~~~~~-g~~~y~~~~WN~ld~~~l~l~~~~  235 (377)
                      +=++.+..+..|=+-.++.. +..+|++  ||++|++++.-+...
T Consensus        42 ~d~~~~~iFt~E~~lRl~~~~~~~~y~~--~niiDllailp~~~~   84 (132)
T 1ors_C           42 VDLILVIILWADYAYRAYKSGDPAGYVK--KTLYEIPALVPAGLL   84 (132)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTTTTT--TCGGGTGGGSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHH
Confidence            33344455566666666643 3458888  999998766544433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	377
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-05
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	9e-05
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	0.002
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	0.004

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 2e-05
 Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 19/104 (18%)

Query: 35  TPLTLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMT 94
           TPL        ++   G    V+  ++          N  +    + L +A    + E+ 
Sbjct: 2   TPL-------HVASFMGHLPIVKNLLQ-----RGASPNVSNVKVETPLHMAARAGHTEVA 49

Query: 95  ELLIVMGVEP-------KDALLQAINSEFVEAVELLLEYEEIVH 131
           + L+    +        +  L  A        V+LLLE     +
Sbjct: 50  KYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPN 93

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (96), Expect = 9e-05
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 58  KCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG---VEPKD-----ALL 109
           + I     +H  D+N     G++ L LA+E ++L + + L+      +   D     ALL
Sbjct: 199 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALL 258

Query: 110 QAINSEFVEAVELLLEY 126
            A+  +  +  ELL + 
Sbjct: 259 LAVELKLKKIAELLCKR 275

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 6e-04
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 46  LSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEP 104
           L+VE+     V++ +++     HI+IN  D  G++AL LA+E +  ++ ELL   G   
Sbjct: 225 LAVEKKHLGLVQRLLEQ----EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 6/60 (10%)

Query: 48  VERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGV-EPKD 106
           VE    + +   +K        D       GR+ L  A+   N  +  LL   G  EP+D
Sbjct: 200 VEAQAASVLELLLK-----AGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPED 254

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.6 bits (80), Expect = 0.004
 Identities = 6/40 (15%), Positives = 19/40 (47%)

Query: 58  KCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELL 97
           + +      +  D++      ++A  ++I+  N ++ E+L
Sbjct: 113 QEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	377
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.85
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.83
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.82
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.78
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.77
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.76
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.76
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.76
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.74
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.74
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.73
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.7
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.67
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.66
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.65
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.64
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.62
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.61
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.59
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.58
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.54
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.54
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.52
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.52
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.51
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.5
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.48
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.47
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.46
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.44
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.43
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.42
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.4
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.35
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.35
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.33
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.14
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.14

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=1.3e-21  Score=158.54  Aligned_cols=101  Identities=25%  Similarity=0.353  Sum_probs=95.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      |++|+.|+++|+.++++.|++.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~-----g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~   77 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAK-----GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVY   77 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTT-----TCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHT
T ss_pred             ChHHHHHHHCCCHHHHHHHHHh-----hhccccccccccccccccccccccccccccccccceeeecccccccchhhhhh
Confidence            6789999999999999999997     99999999999999999999999999999999999886       99999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccc
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQ  147 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~  147 (377)
                      .|+.+++++|+++|++++..+ ..|.||||+|..
T Consensus        78 ~~~~~~v~~Ll~~Gad~~~~d-~~G~t~l~~a~~  110 (118)
T d1myoa_          78 EGHVSCVKLLLSKGADKTVKG-PDGLTALEATDN  110 (118)
T ss_dssp             TTCCHHHHHHHTTCCCSSSSS-SSTCCCCCTCSS
T ss_pred             cCchhhhhhhhcccccceeeC-CCCCCHHHHHhH
Confidence            999999999999999998754 899999999854

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7e-21  Score=156.80  Aligned_cols=113  Identities=19%  Similarity=0.157  Sum_probs=101.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .|+.||.+|+.++++.|++.     |+|+|.+|++|+||||+|+..|+.+++++|+++|++++       ||||+|+..|
T Consensus         4 lL~~A~~~G~~~~v~~Ll~~-----g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g   78 (130)
T d1ycsb1           4 LLLDSSLEGEFDLVQRIIYE-----VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN   78 (130)
T ss_dssp             HHHHHHHHTCHHHHHHHTST-----TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             HHHHHHHcCCHHHHHHHHHc-----CCCccccccccccccccccccccccccccccccccccccccccCcccccccchhh
Confidence            57889999999999999997     99999999999999999999999999999999998886       9999999999


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCcc--ccccChHHHHHhhhhh
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPK--SCQNTAYRILLLLVSQ  160 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~--ac~~n~~~~l~~L~s~  160 (377)
                      +.+++++|+++|++++..+...+.|+++.  +++++..+++..|.+.
T Consensus        79 ~~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~  125 (130)
T d1ycsb1          79 NVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  125 (130)
T ss_dssp             CHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence            99999999999999997766678888765  4666778888666544

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.1e-21  Score=158.79  Aligned_cols=111  Identities=15%  Similarity=0.199  Sum_probs=102.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHHHh
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQAIN  113 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A~~  113 (377)
                      +.|+.||++|+.++++.||+.     |+|+|.+|..|+||||.| ..||.+++++|+++|++++        ||||.|+.
T Consensus         5 ~~L~~Aa~~G~~~~v~~Ll~~-----gad~n~~~~~g~t~l~~a-~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~   78 (125)
T d1bi7b_           5 DWLATAAARGRVEEVRALLEA-----GANPNAPNSYGRRPIQVM-MMGSARVAELLLLHGAEPNCADPATLTRPVHDAAR   78 (125)
T ss_dssp             THHHHHHHHTCHHHHHHHHTT-----TCCTTCCCSSSCCTTTSS-CTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred             hHHHHHHHCCCHHHHHHHHHc-----CCcccccccccccccccc-ccccccccccccccccccccccccccccccccccc
Confidence            468899999999999999997     999999999999999977 4799999999999999886        79999999


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhh
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVS  159 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s  159 (377)
                      .|+.+++++|+++|++++..+ ..|+||+|+||..++.+++..|.+
T Consensus        79 ~g~~~~v~~Ll~~ga~~~~~d-~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          79 EGFLDTLVVLHRAGARLDVRD-AWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HTCHHHHHHHHHHTCCSSCCC-TTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccccc-CCCCCHHHHHHHcCCHHHHHHHHh
Confidence            999999999999999998764 899999999999999999966643

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2e-19  Score=150.82  Aligned_cols=113  Identities=18%  Similarity=0.235  Sum_probs=99.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC----------------
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK----------------  105 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~----------------  105 (377)
                      ++|+.||..|+.++++.||+.     |+|+|.+|.+|+||||+|+ .||.+++++|+++|++++                
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~-----g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~   76 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQN-----NVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARA   76 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTS-----CCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHC-----CCCcCccCCcccccccccc-cccccccccccccccccccccccCcccccccccc
Confidence            578999999999999999997     9999999999999999886 799999999999998873                


Q ss_pred             ------------------------hHHHHHHhcCCHHHHHHHHhcCC-ccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         106 ------------------------DALLQAINSEFVEAVELLLEYEE-IVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       106 ------------------------tpLh~A~~~g~~eiv~~Ll~~~~-~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                                              +|+|+|+..++.++++.|+++++ +.+. .+..|.||||+|+..++.+++.+|.++
T Consensus        77 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~-~d~~g~TpL~~A~~~~~~~iv~~Ll~~  155 (156)
T d1ihba_          77 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH-RNHKGDTACDLARLYGRNEVVSLMQAN  155 (156)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccc-cCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence                                    89999999999999999998887 4444 347889999999999999988777665


Q ss_pred             h
Q psy7030         161 R  161 (377)
Q Consensus       161 ~  161 (377)
                      |
T Consensus       156 G  156 (156)
T d1ihba_         156 G  156 (156)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.77  E-value=5.8e-19  Score=162.58  Aligned_cols=150  Identities=21%  Similarity=0.256  Sum_probs=122.2

Q ss_pred             hhhhhhhhhheeecCCCCCCCCCCCCCCCCCCC-CHhHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHH
Q psy7030           5 AQFNFWFQVGVEIEGPGIVHTQPFDMPNLPTPL-TLEEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALT   83 (377)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh   83 (377)
                      .|+..|.+-....+.|......        +.+ .+..+.|+.||+.|+.++|+.||+.     |+|+|.+|++|+||||
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~t~l~~A~~~G~~~~v~~Ll~~-----Gadvn~~d~~G~T~L~   78 (291)
T d1s70b_          12 EQLKRWIGSETDLEPPVVKRKK--------TKVKFDDGAVFLAACSSGDTEEVLRLLER-----GADINYANVDGLTALH   78 (291)
T ss_dssp             HHHHHHHHTTTSSCCSCCCCSC--------CCCEECHHHHHHHHHHHTCHHHHHHHHHH-----CCCTTCBCTTCCBHHH
T ss_pred             HHHHHHHhCcccccCchhhccc--------cccCCCCchHHHHHHHcCCHHHHHHHHHC-----CCCCCccCCCCCcHHH
Confidence            3566666555555444433221        111 1245789999999999999999998     9999999999999999


Q ss_pred             HHHHcCCHHHHHHHHhCCCCcC----------------------------------------------------------
Q psy7030          84 LAIEGENLEMTELLIVMGVEPK----------------------------------------------------------  105 (377)
Q Consensus        84 ~A~~~g~~~iv~~Ll~~ga~i~----------------------------------------------------------  105 (377)
                      +|+.+||.+++++|+++|++..                                                          
T Consensus        79 ~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l  158 (291)
T d1s70b_          79 QACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE  158 (291)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHH
T ss_pred             HHHhcCCceeeeeecccccccccccccccccccccccccccchhhcccccCcccccccccCccccccccccccchhcccc
Confidence            9999999999999999987641                                                          


Q ss_pred             ------------------------------------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCc
Q psy7030         106 ------------------------------------------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPP  143 (377)
Q Consensus       106 ------------------------------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh  143 (377)
                                                                ||||.|+..|+.++++.|+++|++++..+ ..|.||||
T Consensus       159 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~-~~g~TpL~  237 (291)
T d1s70b_         159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD-YDGWTPLH  237 (291)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC-TTCCCHHH
T ss_pred             ccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceecccccc-cCCCCHHH
Confidence                                                      88999999999999999999999998653 78999999


Q ss_pred             cccccChHHHHHhhhhhhHHHHHHh
Q psy7030         144 KSCQNTAYRILLLLVSQRADVILLE  168 (377)
Q Consensus       144 ~ac~~n~~~~l~~L~s~~~~~~ll~  168 (377)
                      +||..++.+++.+|.++|+++...+
T Consensus       238 ~A~~~g~~~iv~lLl~~Gadv~~~d  262 (291)
T d1s70b_         238 AAAHWGKEEACRILVENLCDMEAVN  262 (291)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred             HHHHcCCHHHHHHHHHCCCCCCCcC
Confidence            9999999999988888887765543

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=1.6e-18  Score=144.76  Aligned_cols=111  Identities=29%  Similarity=0.316  Sum_probs=98.0

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------------
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------------  105 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------------  105 (377)
                      ..++|++||+.|+.++++.||+.     |++++ +|..|+||||+|+..++.++++.++.......              
T Consensus         2 ~~t~L~~Aa~~g~~~~v~~LL~~-----ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (153)
T d1awcb_           2 LGKKLLEAARAGQDDEVRILMAN-----GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAA   75 (153)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHH-----TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHc-----CCCcc-cccCCCcccccccccccccccccccccccccccccccccccccccc
Confidence            35789999999999999999998     99887 79999999999999999999988877543221              


Q ss_pred             --------------------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhh
Q psy7030         106 --------------------------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLL  157 (377)
Q Consensus       106 --------------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L  157 (377)
                                                ||||+|+..|+.+++++|+++|++++.. +..|.||||+||.+++.+++.+|
T Consensus        76 ~~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~-d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          76 SEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ-SKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             ccccceeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCccc-CCCCCCHHHHHHHcCCHHHHHhC
Confidence                                      9999999999999999999999999865 48899999999999999987554

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.2e-18  Score=146.85  Aligned_cols=109  Identities=17%  Similarity=0.262  Sum_probs=77.1

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .++|+.||.+|+.++|+.||+.    +++|+|.+|..|+||||+|+ .|+.++++.|++++.+++       +|++.|+.
T Consensus         3 g~~L~~Aa~~g~~~~vk~lL~~----~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~   77 (156)
T d1bd8a_           3 GDRLSGAAARGDVQEVRRLLHR----ELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAAR   77 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHT----TCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHh----CCCCCCccCCCCCccccccc-ccccccccccccccccccccccccccccccccc
Confidence            4679999999999999999986    48899999999999999886 488899999999888775       45555555


Q ss_pred             cCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHH
Q psy7030         114 SEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILL  155 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~  155 (377)
                      .++.++++.++++|++++.. ++.|.||||.||..++.+++.
T Consensus        78 ~~~~~~~~~~l~~~~~~n~~-~~~~~t~L~~A~~~~~~~i~~  118 (156)
T d1bd8a_          78 TGFLDTLKVLVEHGADVNVP-DGTGALPIHLAVQEGHTAVVS  118 (156)
T ss_dssp             TTCHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHHTCHHHHH
T ss_pred             cccccccccccccccccccc-cCCCCeeeccccccccccccc
Confidence            55555555555555544433 244455555555555554443

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=1.8e-18  Score=146.59  Aligned_cols=112  Identities=15%  Similarity=0.105  Sum_probs=100.1

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCccccc------CCCCCcHHHHHHHc---CCHHHHHHHHhCCCCcC-------h
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCV------DPLGRSALTLAIEG---ENLEMTELLIVMGVEPK-------D  106 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~------D~~G~TpLh~A~~~---g~~~iv~~Ll~~ga~i~-------t  106 (377)
                      .+.+|++.++...+..++..     |.|++.+      +..|+||||+|++.   |+.+++++|+++|++++       |
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~-----g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~T   83 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYAD-----GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGST   83 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHT-----TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCC
T ss_pred             HHHHHHHhCCHHHHHHHHHc-----CCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhcc
Confidence            47789999999999999987     8887754      78899999999974   68899999999999986       9


Q ss_pred             HHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         107 ALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       107 pLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      |||+|+..|+.+++++|+++|++++.. +..|.||||+||..++.+++..|.+.
T Consensus        84 pLh~A~~~~~~~~v~~Ll~~gad~~~~-d~~g~tpL~~A~~~~~~~i~~~L~~~  136 (154)
T d1dcqa1          84 ALHYCCLTDNAECLKLLLRGKASIEIA-NESGETPLDIAKRLKHEHCEELLTQA  136 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             ccccccccccccccccccccCcccccc-CCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            999999999999999999999999875 48999999999999999999666543

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=1.2e-18  Score=157.34  Aligned_cols=59  Identities=19%  Similarity=0.155  Sum_probs=43.5

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCc---ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCc
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHID---INCVDPLGRSALTLAIEGENLEMTELLIVMGVEP  104 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~d---vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i  104 (377)
                      .+.|+.||+.|+.++++.||+.     |++   +|.+|..|+||||+|+.+|+.+++++|+++|+++
T Consensus        10 ~t~Lh~A~~~~~~~~v~~Ll~~-----~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i   71 (255)
T d1oy3d_          10 DTALHLAVIHQHEPFLDFLLGF-----SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV   71 (255)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHH-----HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred             CCHHHHHHHcCCHHHHHHHHHc-----CCCcccccCcCCCCCCccchHHhhcccccccccccccccc
Confidence            3556777788888777777776     555   5567777777777777777777777777777765

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.1e-18  Score=148.07  Aligned_cols=112  Identities=16%  Similarity=0.179  Sum_probs=92.7

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC---------------
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK---------------  105 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~---------------  105 (377)
                      ++.|+.||+.|+.++++.|++.. ..+|+|+|.+|..|+||||+|+..|+.++++.|+++|++.+               
T Consensus         4 ~TpLh~A~~~g~~~~v~~Ll~~~-~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~a~~   82 (228)
T d1k1aa_           4 DTPLHIAVVQGNLPAVHRLVNLF-QQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE   82 (228)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHH-HHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHHHH-HHCCCCCCccCCCCCccceehhcccccccccccccccccccccccccccccccccc
Confidence            35688899999999999998631 12499999999999999999999999999999999987662               


Q ss_pred             --------------------------------------------------------------------------------
Q psy7030         106 --------------------------------------------------------------------------------  105 (377)
Q Consensus       106 --------------------------------------------------------------------------------  105 (377)
                                                                                                      
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~  162 (228)
T d1k1aa_          83 HRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQL  162 (228)
T ss_dssp             TTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred             cccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhh
Confidence                                                                                            


Q ss_pred             ----------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHH
Q psy7030         106 ----------------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRIL  154 (377)
Q Consensus       106 ----------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l  154 (377)
                                      ||||+|+..|+.+++++|+++|++++.. +..|+||||+|+..++.+++
T Consensus       163 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~-d~~G~TpL~~A~~~~~~div  226 (228)
T d1k1aa_         163 LLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLK-NCHNDTPLMVARSRRVIDIL  226 (228)
T ss_dssp             HHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCTTTTCSSHHHHHHH
T ss_pred             hhhhccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHhCCCcccc
Confidence                            7888888888888888888888888764 37788888888877766654

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.73  E-value=1.1e-18  Score=159.03  Aligned_cols=117  Identities=15%  Similarity=0.136  Sum_probs=102.5

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhc---cCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC------------
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAY---RNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK------------  105 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~---~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~------------  105 (377)
                      .+.|+.||..|+.++++.||....   +.+|+|+|.+|.+|+||||+|+.+|+.+++++|+++|++++            
T Consensus        34 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~  113 (277)
T d2fo1e1          34 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQ  113 (277)
T ss_dssp             CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeeccccccccccccccccccccccccccccccccccc
Confidence            456888999999999998875421   34599999999999999999999999999999999998772            


Q ss_pred             --------------------------------------------------------------------------------
Q psy7030         106 --------------------------------------------------------------------------------  105 (377)
Q Consensus       106 --------------------------------------------------------------------------------  105 (377)
                                                                                                      
T Consensus       114 a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~  193 (277)
T d2fo1e1         114 AAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHY  193 (277)
T ss_dssp             HHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHH
T ss_pred             hhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCcccc
Confidence                                                                                            


Q ss_pred             -----------------------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHh
Q psy7030         106 -----------------------------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLL  156 (377)
Q Consensus       106 -----------------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~  156 (377)
                                                   ||||+|+..|+.+++++|+++|++++..+ ..|+||||+||..++.+++.+
T Consensus       194 ~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d-~~G~T~L~~A~~~~~~~iv~l  272 (277)
T d2fo1e1         194 AAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD-ATDHTARQLAQANNHHNIVDI  272 (277)
T ss_dssp             HHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-SSSCCHHHHHHHTTCHHHHHH
T ss_pred             ccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcC-CCCCCHHHHHHHcCCHHHHHH
Confidence                                         89999999999999999999999998754 889999999999999998866


Q ss_pred             hh
Q psy7030         157 LV  158 (377)
Q Consensus       157 L~  158 (377)
                      |.
T Consensus       273 L~  274 (277)
T d2fo1e1         273 FD  274 (277)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=3.7e-17  Score=144.96  Aligned_cols=117  Identities=15%  Similarity=0.062  Sum_probs=98.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-----------------
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-----------------  105 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-----------------  105 (377)
                      ++|.||..|+.+.++.||+.    ++.+++.+|.+|+||||+|+..|+.+++++|+++|++++                 
T Consensus         3 pLh~A~~~g~~~~v~~Ll~~----~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~   78 (229)
T d1ixva_           3 PLHQACMENEFFKVQELLHS----KPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC   78 (229)
T ss_dssp             HHHHHHHHTCHHHHHHHHHH----CGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred             hHHHHHHcCCHHHHHHHHHc----CCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccc
Confidence            58889999999999999987    478999999999999999999999999999999998762                 


Q ss_pred             -------------------------------------------------------------hHHHHHHhcCCHHHHHHHH
Q psy7030         106 -------------------------------------------------------------DALLQAINSEFVEAVELLL  124 (377)
Q Consensus       106 -------------------------------------------------------------tpLh~A~~~g~~eiv~~Ll  124 (377)
                                                                                   ||||+|+..|+.++++.|+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll  158 (229)
T d1ixva_          79 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC  158 (229)
T ss_dssp             HHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhccccccccccc
Confidence                                                                         7888888888888888888


Q ss_pred             hcCC-ccCCCCCCCCCCCCccccccChHHHHHhhhh-hhHHH
Q psy7030         125 EYEE-IVHKEGEPYLSRKPPKSCQNTAYRILLLLVS-QRADV  164 (377)
Q Consensus       125 ~~~~-~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s-~~~~~  164 (377)
                      +++. +++.. +..|+||||+||..++.+++..|.+ .|++.
T Consensus       159 ~~~~~~in~~-d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~  199 (229)
T d1ixva_         159 GLGKSAVNWQ-DKQGWTPLFHALAEGHGDAAVLLVEKYGAEY  199 (229)
T ss_dssp             TTTCCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS
T ss_pred             cccccccccc-ccccCCchhhhcccccHHHHHHHHHhcCCCC
Confidence            8874 44543 4788899999999888888865553 45543

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.67  E-value=4.7e-18  Score=162.28  Aligned_cols=122  Identities=11%  Similarity=0.065  Sum_probs=100.5

Q ss_pred             hHHHHHHHHHcCCHHHHHH---HHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC---------hH
Q psy7030          40 EEKKYLLSVERGDTATVRK---CIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK---------DA  107 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~---LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~---------tp  107 (377)
                      .++.++.||++||.++++.   |++.     |+++|.+|.+|+||||+||++||.++|++|+++|++++         ||
T Consensus        90 ~~t~L~~Aa~~g~~~~~~~~~~L~~~-----~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~  164 (346)
T d2ajaa1          90 SEVICFVAAITGCSSALDTLCLLLTS-----DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHA  164 (346)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHTTC--C-----CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHH
T ss_pred             CCcHHHHHHHhCCHHHHHHHHHHHhC-----CCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCCh
Confidence            3567899999999988765   5665     99999999999999999999999999999999999874         99


Q ss_pred             HHHHHhcCCHHHHHHHHhcCCccCCC--CCCCCCCCCccccccChHHHHHhhhhhhHHHHH
Q psy7030         108 LLQAINSEFVEAVELLLEYEEIVHKE--GEPYLSRKPPKSCQNTAYRILLLLVSQRADVIL  166 (377)
Q Consensus       108 Lh~A~~~g~~eiv~~Ll~~~~~~~~~--~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~~l  166 (377)
                      ||+|+..||.+++++|++.|++....  .+..+.|++|.||..++.+++..|.+.|++...
T Consensus       165 L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~  225 (346)
T d2ajaa1         165 FRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAY  225 (346)
T ss_dssp             HHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHH
T ss_pred             hHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcch
Confidence            99999999999999999999765311  113456778889999999999888888876543

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.1e-16  Score=142.67  Aligned_cols=115  Identities=20%  Similarity=0.289  Sum_probs=87.6

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      +..|+..|+.++++.|++.     |+|+|.+|++|+||||+|+..|+.+++++|+++|++++       ||||+|+..++
T Consensus        74 ~~~~~~~~~~~i~~~Ll~~-----~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~  148 (223)
T d1uoha_          74 LHIAASAGRDEIVKALLGK-----GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGN  148 (223)
T ss_dssp             HHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             ccccccccccchhHHHhcc-----CceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCC
Confidence            4556666777777777765     78888888888888888888888888888888888775       77888888888


Q ss_pred             HHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         117 VEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       117 ~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      .+++++|++.+.+++..+ ..|+||||.||..++.+++..|.++|++.
T Consensus       149 ~~~~~~L~~~~~~i~~~d-~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~  195 (223)
T d1uoha_         149 LKMIHILLYYKASTNIQD-TEGNTPLHLACDEERVEEAKLLVSQGASI  195 (223)
T ss_dssp             HHHHHHHHHTTCCSCCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred             cchhhhhccccceeeecc-CCCCceeccccccCcHHHHHHHHHCCCCC
Confidence            888887777777777543 67778888887777777776666555543

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.5e-16  Score=140.19  Aligned_cols=110  Identities=16%  Similarity=0.111  Sum_probs=99.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      +.++.|+..|+.++++.|++.     |+|++.+|..|.||||+|+..++.+++++|.++|.+++       ||||.|+..
T Consensus       105 tpL~~A~~~~~~e~~~~Ll~~-----g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~  179 (223)
T d1uoha_         105 TPLHYAASKNRHEIAVMLLEG-----GANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDE  179 (223)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred             chhhHHHHcCCHHHHHHHHHC-----CCCCCCcCCCCCccchhhhhcCCcchhhhhccccceeeeccCCCCceecccccc
Confidence            358889999999999999997     99999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLV  158 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~  158 (377)
                      |+.+++++|+++|++++..+ ..|+||||+|. .+..+++..|.
T Consensus       180 g~~~~v~~LL~~Gad~~~~d-~~g~tpl~~A~-~~~~~i~~~Ll  221 (223)
T d1uoha_         180 ERVEEAKLLVSQGASIYIEN-KEEKTPLQVAK-GGLGLILKRMV  221 (223)
T ss_dssp             TCHHHHHHHHHTTCCSCCCC-TTSCCHHHHCC-TTHHHHHHHHH
T ss_pred             CcHHHHHHHHHCCCCCCCCC-CCCCCHHHHHH-CCCHHHHhccc
Confidence            99999999999999999754 88999999984 57666665443

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=1.2e-16  Score=143.95  Aligned_cols=96  Identities=18%  Similarity=0.128  Sum_probs=87.5

Q ss_pred             CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC--------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCC
Q psy7030          67 HHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK--------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYL  138 (377)
Q Consensus        67 ~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~--------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~  138 (377)
                      .+.++|.+|..|+||||+|+.+|+.+++++|+++|++.+        ||||+|+..|+.+++++|+++|++++..+ ..|
T Consensus       147 ~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d-~~g  225 (255)
T d1oy3d_         147 WRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM-YGG  225 (255)
T ss_dssp             GGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTS
T ss_pred             cCcccccccccCcccccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCCCCC-CCC
Confidence            467778899999999999999999999999999887664        99999999999999999999999999764 889


Q ss_pred             CCCCccccccChHHHHHhhhhhhHH
Q psy7030         139 SRKPPKSCQNTAYRILLLLVSQRAD  163 (377)
Q Consensus       139 ~t~lh~ac~~n~~~~l~~L~s~~~~  163 (377)
                      .||||+||..++.+++..|.++|++
T Consensus       226 ~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         226 RTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             CCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCC
Confidence            9999999999999999888877763

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=9.4e-16  Score=129.54  Aligned_cols=85  Identities=19%  Similarity=0.084  Sum_probs=77.8

Q ss_pred             HHHHHHHHHc---CCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHH
Q psy7030          41 EKKYLLSVER---GDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQ  110 (377)
Q Consensus        41 e~~ll~Aa~~---g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~  110 (377)
                      ++.++.|++.   |+.++++.|++.     |+|+|.+|..|+||||+||..|+.+++++|+++|++++       ||||+
T Consensus        46 ~t~Lh~A~~~~~~~~~~iv~~Ll~~-----gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~  120 (154)
T d1dcqa1          46 ETALHLAVRSVDRTSLHIVDFLVQN-----SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI  120 (154)
T ss_dssp             CBHHHHHHHHCCTTTHHHHHHHHHH-----CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             CchHHHHHHhcCCCCHHHHHHHHHc-----CCChhhhhhhhccccccccccccccccccccccCccccccCCCCCCHHHH
Confidence            3467889974   688999999998     99999999999999999999999999999999999886       99999


Q ss_pred             HHhcCCHHHHHHHHhcCCcc
Q psy7030         111 AINSEFVEAVELLLEYEEIV  130 (377)
Q Consensus       111 A~~~g~~eiv~~Ll~~~~~~  130 (377)
                      |+..|+.+++++|++.++..
T Consensus       121 A~~~~~~~i~~~L~~~~~~~  140 (154)
T d1dcqa1         121 AKRLKHEHCEELLTQALSGR  140 (154)
T ss_dssp             HHHTTCHHHHHHHHHHHTTC
T ss_pred             HHHcCCHHHHHHHHHhCCCC
Confidence            99999999999999977644

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.2e-16  Score=137.03  Aligned_cols=112  Identities=21%  Similarity=0.116  Sum_probs=87.5

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC---------------
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK---------------  105 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~---------------  105 (377)
                      ++.|+.||..|+.++++.|++.     |+|++.+|..|+||||.|+.+|+.++++.|++.+.+..               
T Consensus        40 ~TpLh~A~~~~~~~iv~~L~~~-----g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~  114 (221)
T d1iknd_          40 QTPLHLAVITNQPEIAEALLGA-----GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTC  114 (221)
T ss_dssp             CCHHHHHHHTTCHHHHHCCCSC-----CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCH
T ss_pred             Cccccccccccccccccccccc-----cccccccccccccccccccccccccccchhhhhcccccccccccccccccchh
Confidence            4568889999999999999987     99999999999999999999999999999988664431               


Q ss_pred             --------------------------------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHH
Q psy7030         106 --------------------------------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRI  153 (377)
Q Consensus       106 --------------------------------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~  153 (377)
                                                      ||||+|+..|+.+++++|+++|++++..+ ..|+||+|+||..++.+.
T Consensus       115 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~-~~G~tpl~~A~~~~~~~~  193 (221)
T d1iknd_         115 LHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT-YQGYSPYQLTWGRPSTRI  193 (221)
T ss_dssp             HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCC-TTCCCGGGGCTTSSCHHH
T ss_pred             hhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccC-CCCCCHHHHHHHCCCHHH
Confidence                                            67777777777777777777777776543 667777777777777666


Q ss_pred             HHhhh
Q psy7030         154 LLLLV  158 (377)
Q Consensus       154 l~~L~  158 (377)
                      +..|.
T Consensus       194 ~~~l~  198 (221)
T d1iknd_         194 QQQLG  198 (221)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            64443

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.2e-15  Score=144.19  Aligned_cols=109  Identities=16%  Similarity=0.168  Sum_probs=101.6

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .++.|++.|+.++++.|++.     |++++..+..+.||||.|+..++.++++.++++|++++       ||||+|++.|
T Consensus       267 ~l~~a~~~~~~~i~~~Ll~~-----g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g  341 (408)
T d1n11a_         267 PLHLVAQEGHVPVADVLIKH-----GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG  341 (408)
T ss_dssp             HHHHHHHHTCHHHHHHHHHH-----TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             hhhhhhhcCcHHHHHHHHHC-----CCccccccccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHHHcC
Confidence            57889999999999999998     99999999999999999999999999999999999886       9999999999


Q ss_pred             CHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhh
Q psy7030         116 FVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLL  157 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L  157 (377)
                      +.+++++|+++|++++.. +..|+||||+|+..|+.+++.+|
T Consensus       342 ~~~iv~~Ll~~GAd~n~~-d~~G~t~L~~A~~~~~~~iv~~L  382 (408)
T d1n11a_         342 HTDIVTLLLKNGASPNEV-SSDGTTPLAIAKRLGYISVTDVL  382 (408)
T ss_dssp             CHHHHHHHHHTTCCSCCC-CSSSCCHHHHHHHTTCHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHH
Confidence            999999999999999975 48899999999999999988544

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.5e-15  Score=143.81  Aligned_cols=83  Identities=18%  Similarity=0.167  Sum_probs=76.1

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      +|+.||..|+.++|+.||+.     |+|+|.+|..|+||||+|+..|+.+++++|+++|++++       ||||+|+..|
T Consensus         3 pL~~Aa~~g~~~~v~~Ll~~-----g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~t~L~~A~~~g   77 (408)
T d1n11a_           3 PLHVASFMGHLPIVKNLLQR-----GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIG   77 (408)
T ss_dssp             HHHHHHHHTCHHHHHHHHHT-----TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHT
T ss_pred             hHHHHHHCcCHHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence            58889999999999999997     99999999999999999999999999999999999886       8999999999


Q ss_pred             CHHHHHHHHhcCCcc
Q psy7030         116 FVEAVELLLEYEEIV  130 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~  130 (377)
                      +.+++++|+..+++.
T Consensus        78 ~~~~~~~Ll~~~~~~   92 (408)
T d1n11a_          78 HTNMVKLLLENNANP   92 (408)
T ss_dssp             CHHHHHHHHHHTCCT
T ss_pred             CHHHHHHHHHhhhcc
Confidence            998888887665543

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.54  E-value=1e-15  Score=133.51  Aligned_cols=115  Identities=18%  Similarity=0.163  Sum_probs=99.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhc-c-------------------------------------------------------
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAY-R-------------------------------------------------------   65 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~-~-------------------------------------------------------   65 (377)
                      +.|+.||+.|+.++++.||+... +                                                       
T Consensus        25 t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (209)
T d1ot8a_          25 TSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEG  104 (209)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHHHHTTCTT
T ss_pred             CHHHHHHHcCCHHHHHHHHhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence            56899999999999999998632 2                                                       


Q ss_pred             ------CCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCC
Q psy7030          66 ------NHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHK  132 (377)
Q Consensus        66 ------~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~  132 (377)
                            .+|++++.+|..|+|||+.|+..++.++++.+++++.+++       ||||+|+..|+.++++.|+++|++++.
T Consensus       105 ~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~  184 (209)
T d1ot8a_         105 MVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREI  184 (209)
T ss_dssp             HHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             hhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHHHHHHHCCCCCCC
Confidence                  2788888888999999999999999999999999887775       999999999999999999999999987


Q ss_pred             CCCCCCCCCCccccccChHHHHHhh
Q psy7030         133 EGEPYLSRKPPKSCQNTAYRILLLL  157 (377)
Q Consensus       133 ~~~~~~~t~lh~ac~~n~~~~l~~L  157 (377)
                      .+ ..|+||||+||..++.+++.+|
T Consensus       185 ~d-~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         185 TD-HMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             CC-TTSCCHHHHHHHTTCHHHHHHH
T ss_pred             cC-CCCCCHHHHHHHcCCHHHHhhc
Confidence            64 7899999999999999988655

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.54  E-value=1.5e-14  Score=127.75  Aligned_cols=111  Identities=16%  Similarity=0.144  Sum_probs=97.1

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCcC-------hHHHHHHhc
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMG-VEPK-------DALLQAINS  114 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~g-a~i~-------tpLh~A~~~  114 (377)
                      .+..++..++.++++.|++.     |.+.+.+|..|+||||+|+..|+.++++.|+++| .+++       ||||+|+..
T Consensus       108 ~l~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~  182 (229)
T d1ixva_         108 CLHLAVGKKWFEVSQFLIEN-----GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE  182 (229)
T ss_dssp             HHHHHHHTTCHHHHHHHHHT-----TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT
T ss_pred             ccccccccchhhhhhhhhhh-----cccccccCCCCCCccchhhhcccccccccccccccccccccccccCCchhhhccc
Confidence            46779999999999999997     9999999999999999999999999999999987 4444       999999999


Q ss_pred             CCHHHHHHHHh-cCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhH
Q psy7030         115 EFVEAVELLLE-YEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRA  162 (377)
Q Consensus       115 g~~eiv~~Ll~-~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~  162 (377)
                      |+.+++++|++ .|++++..+ ..|+||||+|++   .+++.+|.++|+
T Consensus       183 ~~~~~v~~Ll~~~gad~~~~d-~~g~t~l~~A~~---~~~~~~Ll~~g~  227 (229)
T d1ixva_         183 GHGDAAVLLVEKYGAEYDLVD-NKGAKAEDVALN---EQVKKFFLNNVV  227 (229)
T ss_dssp             TCHHHHHHHHHHHCCCSCCCC-TTSCCTGGGCSC---HHHHHHHHHHCC
T ss_pred             ccHHHHHHHHHhcCCCCCCcC-CCCCCHHHHHhh---HHHHHHHHHcCC
Confidence            99999999997 599999764 899999999985   355666665654

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.1e-14  Score=132.54  Aligned_cols=117  Identities=21%  Similarity=0.261  Sum_probs=103.4

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHc----CCHHHHHHHHhCCCCcC-------hHHHHH
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEG----ENLEMTELLIVMGVEPK-------DALLQA  111 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~----g~~~iv~~Ll~~ga~i~-------tpLh~A  111 (377)
                      .++.|+++|+.++++.|++.    .|+|++.+|..|+++++.+...    +..++++.|+++|++++       ||||.|
T Consensus       151 ~L~~A~~~~~~~~~~~Ll~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a  226 (285)
T d1wdya_         151 ALMDAAEKGHVEVLKILLDE----MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA  226 (285)
T ss_dssp             HHHHHHHHTCHHHHHHHHHT----SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHhc----cCCCcccccCCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchh
Confidence            57889999999999999986    4999999999999998876544    34579999999999886       999999


Q ss_pred             HhcCCHHHHHHHHh-cCCccCCCCCCCCCCCCccccccChHHHHHhhhhhhHHH
Q psy7030         112 INSEFVEAVELLLE-YEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQRADV  164 (377)
Q Consensus       112 ~~~g~~eiv~~Ll~-~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~~~~~  164 (377)
                      +..|+.+++++|++ .|++++..+ ..|.||||.||+.++++++..|.++|+++
T Consensus       227 ~~~~~~~~v~~lL~~~g~din~~d-~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~  279 (285)
T d1wdya_         227 VEKKHLGLVQRLLEQEHIEINDTD-SDGKTALLLAVELKLKKIAELLCKRGAST  279 (285)
T ss_dssp             HHTTCHHHHHHHHHSSSCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred             hhcCcHHHHHHHHHcCCCCCcCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            99999999999997 588998754 78999999999999999998888888764

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.52  E-value=2.6e-14  Score=124.40  Aligned_cols=78  Identities=17%  Similarity=0.103  Sum_probs=73.8

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHh
Q psy7030          41 EKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAIN  113 (377)
Q Consensus        41 e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~  113 (377)
                      .+.+..|+..|+.+.++.+++.     +.++|.+|..|.||||+|+..|+.++++.|+++|++++       ||||+|++
T Consensus       124 ~t~l~~~~~~~~~~~~~~l~~~-----~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~  198 (209)
T d1ot8a_         124 KTALHWAAAVNNTEAVNILLMH-----HANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASE  198 (209)
T ss_dssp             CBHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCcchhhcccCcceeeeeeccc-----cccccccccccccccchhccccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence            3468999999999999999998     99999999999999999999999999999999999986       99999999


Q ss_pred             cCCHHHHHHH
Q psy7030         114 SEFVEAVELL  123 (377)
Q Consensus       114 ~g~~eiv~~L  123 (377)
                      +|+.++|++|
T Consensus       199 ~~~~~iv~lL  208 (209)
T d1ot8a_         199 RLHHDIVRLL  208 (209)
T ss_dssp             TTCHHHHHHH
T ss_pred             cCCHHHHhhc
Confidence            9999999986

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.51  E-value=2.7e-15  Score=120.64  Aligned_cols=87  Identities=16%  Similarity=0.146  Sum_probs=79.5

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChH
Q psy7030          79 RSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAY  151 (377)
Q Consensus        79 ~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~  151 (377)
                      .|||++|+++|+.++++.|+++|++++       ||||+|+..|+.+++++|+++|++++..+ ..|+||||+||..++.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d-~~g~tpLh~A~~~~~~   81 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD-KHHITPLLSAVYEGHV   81 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCS-SSCSCHHHHHHTTTCC
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecc-cccccchhhhhhcCch
Confidence            389999999999999999999999986       99999999999999999999999999764 7899999999999999


Q ss_pred             HHHHhhhhhhHHHHH
Q psy7030         152 RILLLLVSQRADVIL  166 (377)
Q Consensus       152 ~~l~~L~s~~~~~~l  166 (377)
                      +++..|.++|++...
T Consensus        82 ~~v~~Ll~~Gad~~~   96 (118)
T d1myoa_          82 SCVKLLLSKGADKTV   96 (118)
T ss_dssp             HHHHHHHTTCCCSSS
T ss_pred             hhhhhhhccccccee
Confidence            999888877766443

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.5e-15  Score=134.53  Aligned_cols=86  Identities=20%  Similarity=0.259  Sum_probs=70.3

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      .|+.|+..|+.+.++.+++.. +.+|+++|.+|.+|+||||+|+..|+.+++++|+++|++++       ||||.|+..|
T Consensus         5 ~Lh~A~~~g~~~~~~~li~~~-~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~   83 (221)
T d1iknd_           5 FLHLAIIHEEKALTMEVIRQV-KGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQG   83 (221)
T ss_dssp             TTHHHHHTTCSSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHHHHHHHH-HhCCCCcccCCCCCCccccccccccccccccccccccccccccccccccccccccccc
Confidence            456699999976666544320 11399999999999999999999999999999999999886       9999999999


Q ss_pred             CHHHHHHHHhcCCc
Q psy7030         116 FVEAVELLLEYEEI  129 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~  129 (377)
                      +.++++.|++.+..
T Consensus        84 ~~~~~~~l~~~~~~   97 (221)
T d1iknd_          84 CLASVGVLTQSCTT   97 (221)
T ss_dssp             CHHHHHHHHHSTTT
T ss_pred             cccccchhhhhccc
Confidence            99988888876543

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=8.3e-15  Score=119.76  Aligned_cols=87  Identities=16%  Similarity=0.152  Sum_probs=79.7

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHH
Q psy7030          80 SALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYR  152 (377)
Q Consensus        80 TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~  152 (377)
                      ++||.||..|+.++++.|+++|+|++       ||||+|+..|+.+++++|+++|++++..+ ..|+||||+||..++.+
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d-~~g~tpLh~A~~~g~~~   81 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD-SDGWTPLHCAASCNNVQ   81 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC-TTCCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCcccccccccccccccccccccccccccccccccccccc-ccCcccccccchhhHHH
Confidence            68999999999999999999999987       99999999999999999999999998754 88999999999999999


Q ss_pred             HHHhhhhhhHHHHHH
Q psy7030         153 ILLLLVSQRADVILL  167 (377)
Q Consensus       153 ~l~~L~s~~~~~~ll  167 (377)
                      ++..|.++|+++...
T Consensus        82 ~v~~Ll~~ga~v~~~   96 (130)
T d1ycsb1          82 VCKFLVESGAAVFAM   96 (130)
T ss_dssp             HHHHHHHTTCCTTCC
T ss_pred             HHHHHHHcCCCcccc
Confidence            998888888775543

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.47  E-value=3.5e-14  Score=132.02  Aligned_cols=44  Identities=18%  Similarity=0.167  Sum_probs=40.4

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCC
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGEN   90 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~   90 (377)
                      +.|+.||..|+.++|+.||+.     |+|++.+|..|+||||.||..+|
T Consensus       109 T~LH~Aa~~g~~~~v~~Ll~~-----gad~~~~d~~G~TpL~~A~~~~~  152 (301)
T d1sw6a_         109 TPLHWLTSIANLELVKHLVKH-----GSNRLYGDNMGESCLVKAVKSVN  152 (301)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCTTBCCTTCCCHHHHHHHSSH
T ss_pred             CHHHHHHHcCCHHHHHHHHHC-----CCCCCcCCcccccHHHHhhhccc
Confidence            468889999999999999997     99999999999999999998664

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=5.4e-14  Score=113.94  Aligned_cols=74  Identities=15%  Similarity=0.095  Sum_probs=68.8

Q ss_pred             HHHcCCHHHHHHHHHhhccCCCCcccccCCCCC-cHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHH
Q psy7030          47 SVERGDTATVRKCIKRAYRNHHIDINCVDPLGR-SALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVE  118 (377)
Q Consensus        47 Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~-TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~e  118 (377)
                      +|..|+.++++.|++.     |+|+|.+|..|. ||||+|++.|+.+++++|+++|++++       ||||+|+..|+.|
T Consensus        42 ~a~~g~~~~v~~Ll~~-----ga~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~  116 (125)
T d1bi7b_          42 VMMMGSARVAELLLLH-----GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD  116 (125)
T ss_dssp             SSCTTCHHHHHHHHTT-----TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred             cccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccCCCCCHHHHHHHcCCHH
Confidence            4568999999999997     999999998876 69999999999999999999999886       9999999999999


Q ss_pred             HHHHHHh
Q psy7030         119 AVELLLE  125 (377)
Q Consensus       119 iv~~Ll~  125 (377)
                      ++++|++
T Consensus       117 ~v~~Lls  123 (125)
T d1bi7b_         117 VARYLRA  123 (125)
T ss_dssp             HHHHHSS
T ss_pred             HHHHHHh
Confidence            9999986

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.44  E-value=5.8e-15  Score=133.84  Aligned_cols=104  Identities=14%  Similarity=0.163  Sum_probs=85.3

Q ss_pred             cCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHH--------HhCCCCcC-------hHHHHHHhc
Q psy7030          50 RGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELL--------IVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        50 ~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~L--------l~~ga~i~-------tpLh~A~~~  114 (377)
                      .|+.++++.|.+.     ++|+.. +++|+||||+||.+|+.++++.|        +++|++++       ||||+|+..
T Consensus        11 ~~~~~~~~~l~~~-----~~n~~~-~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh~A~~~   84 (277)
T d2fo1e1          11 AGSYAITEPITRE-----SVNIID-PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLA   84 (277)
T ss_dssp             HSSSCCCSCCSTT-----TTTTCC-CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHH
T ss_pred             CCCHHHHHHHHhc-----CCCcCC-CCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeecccccc
Confidence            5666666666655     555432 24699999999999999998877        56788886       999999999


Q ss_pred             CCHHHHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         115 EFVEAVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       115 g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      |+.+++++|+++|++++..+ ..|.|++|.|+..++.+....+...
T Consensus        85 g~~~iv~~Ll~~Gad~n~~~-~~g~t~l~~a~~~~~~~~~~~l~~~  129 (277)
T d2fo1e1          85 RRRRLVAYLMKAGADPTIYN-KSERSALHQAAANRDFGMMVYMLNS  129 (277)
T ss_dssp             TCHHHHHHHHHTTCCSCCCC-TTCCCHHHHHHHTTCHHHHHHHTTS
T ss_pred             cccccccccccccccccccc-ccccccccchhhhcchhhhhhhhhc
Confidence            99999999999999998754 7899999999999988888655533

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.3e-13  Score=125.20  Aligned_cols=86  Identities=23%  Similarity=0.265  Sum_probs=75.9

Q ss_pred             HHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCcC-------hHHHHHHhcC
Q psy7030          44 YLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIV-MGVEPK-------DALLQAINSE  115 (377)
Q Consensus        44 ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~-~ga~i~-------tpLh~A~~~g  115 (377)
                      +..+...+..++++.|++.     |+|+|.+|..|+||||.|++.|+.+++++|++ .|++++       ||||+|+..|
T Consensus       190 ~~~~~~~~~~~i~~~Li~~-----ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~  264 (285)
T d1wdya_         190 LLSSDDSDVEAITHLLLDH-----GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK  264 (285)
T ss_dssp             HHCSCTTTHHHHHHHHHHT-----TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred             cccccchHHHHHHHHHHHC-----CCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcC
Confidence            3334445556788899987     99999999999999999999999999999998 488886       9999999999


Q ss_pred             CHHHHHHHHhcCCccCCCC
Q psy7030         116 FVEAVELLLEYEEIVHKEG  134 (377)
Q Consensus       116 ~~eiv~~Ll~~~~~~~~~~  134 (377)
                      +.+++++|+++||++|.++
T Consensus       265 ~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         265 LKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             CHHHHHHHHHHSSCSCCSS
T ss_pred             CHHHHHHHHHCCCCCCccc
Confidence            9999999999999998764

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.42  E-value=6.3e-13  Score=121.42  Aligned_cols=82  Identities=18%  Similarity=0.025  Sum_probs=72.6

Q ss_pred             ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHHHHHHHHhcCCccCCCCCCCCCCCCc
Q psy7030          71 INCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVEAVELLLEYEEIVHKEGEPYLSRKPP  143 (377)
Q Consensus        71 vn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~t~lh  143 (377)
                      ....+..|.||||.|+..|+.++++.|+++|++++       ||||+|+..|+.+++++|+++|++++.. +..|+||||
T Consensus       192 ~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~-d~~G~TaL~  270 (291)
T d1s70b_         192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV-NKVGQTAFD  270 (291)
T ss_dssp             CCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCTTT
T ss_pred             cccccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHH
Confidence            34567889999999999999999999999999886       9999999999999999999999999976 489999999


Q ss_pred             cccccChHHHH
Q psy7030         144 KSCQNTAYRIL  154 (377)
Q Consensus       144 ~ac~~n~~~~l  154 (377)
                      +|++ +..+.+
T Consensus       271 ~A~e-~~~~~L  280 (291)
T d1s70b_         271 VADE-DILGYL  280 (291)
T ss_dssp             SCCS-GGGHHH
T ss_pred             HHHH-HHHHHH
Confidence            9986 444444

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=5.1e-13  Score=111.61  Aligned_cols=108  Identities=19%  Similarity=0.160  Sum_probs=97.9

Q ss_pred             HHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCCHH
Q psy7030          46 LSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEFVE  118 (377)
Q Consensus        46 ~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~~e  118 (377)
                      .+|..|+.++++.||+.     +.++|.++..|.+|++.|+..++.++++.++++|++++       ||||+|+..|+.+
T Consensus        41 ~~A~~~~~~~v~~Ll~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~  115 (156)
T d1bd8a_          41 QVMMFGSTAIALELLKQ-----GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTA  115 (156)
T ss_dssp             HHSCTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH
T ss_pred             ccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccCCCCeeecccccccccc
Confidence            34457999999999997     99999999999999999999999999999999998875       9999999999999


Q ss_pred             HHHHHHhcCCccCCCCCCCCCCCCccccccChHHHHHhhhhh
Q psy7030         119 AVELLLEYEEIVHKEGEPYLSRKPPKSCQNTAYRILLLLVSQ  160 (377)
Q Consensus       119 iv~~Ll~~~~~~~~~~~~~~~t~lh~ac~~n~~~~l~~L~s~  160 (377)
                      ++++|+ .|++++.. +..|.||||+|+..++.+++.+|.+|
T Consensus       116 i~~~L~-~~~~~~~~-d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_         116 VVSFLA-AESDLHRR-DARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHH-TTSCTTCC-CTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             cccccc-cccccccc-CCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            999887 67888765 48899999999999999999877765

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.35  E-value=1.3e-12  Score=107.96  Aligned_cols=76  Identities=28%  Similarity=0.348  Sum_probs=68.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcC
Q psy7030          43 KYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSE  115 (377)
Q Consensus        43 ~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g  115 (377)
                      ....++..++.+.++.+++.     |++.+.+|++|+||||+|+..|+.+++++|+++|++++       ||||+|+.+|
T Consensus        70 ~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g  144 (153)
T d1awcb_          70 PLHMAASEGHANIVEVLLKH-----GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNG  144 (153)
T ss_dssp             HHHHHHHHTCHHHHHHHHTT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             ccccccccccceeeeccccc-----CCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcC
Confidence            35567777777777777765     99999999999999999999999999999999999986       9999999999


Q ss_pred             CHHHHHHH
Q psy7030         116 FVEAVELL  123 (377)
Q Consensus       116 ~~eiv~~L  123 (377)
                      +.|++++|
T Consensus       145 ~~eiv~lL  152 (153)
T d1awcb_         145 NEDLAEIL  152 (153)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHhC
Confidence            99999976

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.35  E-value=1.1e-13  Score=131.49  Aligned_cols=87  Identities=14%  Similarity=0.137  Sum_probs=78.2

Q ss_pred             hHHHHHHHHHcCCHHHHHHHHHhhccCCCCcccccC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCcC----------hH
Q psy7030          40 EEKKYLLSVERGDTATVRKCIKRAYRNHHIDINCVD--PLGRSALTLAIEGENLEMTELLIVMGVEPK----------DA  107 (377)
Q Consensus        40 ~e~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D--~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~----------tp  107 (377)
                      ..+.|+.||++||.++|+.|++.     |++++..|  .+|+||||+|+++||.+++++|+++|++..          ||
T Consensus       126 g~taL~~Aa~~G~~~~v~~Ll~~-----g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~  200 (346)
T d2ajaa1         126 NYQAFRLAAENGHLHVLNRLCEL-----APTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAF  200 (346)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHS-----CTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHCCCHHHHHHHHHc-----CCCccccccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcch
Confidence            35789999999999999999997     99998876  469999999999999999999999997652          67


Q ss_pred             HHHHHhcCCHHHHHHHHhcCCccC
Q psy7030         108 LLQAINSEFVEAVELLLEYEEIVH  131 (377)
Q Consensus       108 Lh~A~~~g~~eiv~~Ll~~~~~~~  131 (377)
                      +|.|+..|+.+++++|+++|++++
T Consensus       201 l~~A~~~g~~~iv~~Ll~~ga~~~  224 (346)
T d2ajaa1         201 RWAAVGRGHHNVINFLLDCPVMLA  224 (346)
T ss_dssp             HHHHSTTCCHHHHHHHTTSHHHHH
T ss_pred             hhHHhhcCHHHHHHHHHhCCCCcc
Confidence            888889999999999999998775

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=3.5e-13  Score=125.10  Aligned_cols=51  Identities=25%  Similarity=0.356  Sum_probs=46.0

Q ss_pred             CCCCccccc-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhcCC
Q psy7030          66 NHHIDINCV-DPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINSEF  116 (377)
Q Consensus        66 ~~g~dvn~~-D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~g~  116 (377)
                      ..++|+|.. |.+|+||||+||..|+.+++++|+++|++++       ||||.|+..++
T Consensus        94 ~~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~  152 (301)
T d1sw6a_          94 NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN  152 (301)
T ss_dssp             TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred             ccCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccccHHHHhhhccc
Confidence            357889865 9999999999999999999999999999986       99999998654

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=8e-11  Score=97.25  Aligned_cols=81  Identities=21%  Similarity=0.127  Sum_probs=70.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CcC-------hHHHHHHh
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGV-EPK-------DALLQAIN  113 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga-~i~-------tpLh~A~~  113 (377)
                      ..+..++..|+.+.++.+++.     +.+++..|..|.+|||+|+..++.++++.|+++|+ +.+       ||||+|+.
T Consensus        68 ~~l~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~  142 (156)
T d1ihba_          68 AVIHDAARAGFLDTLQTLLEF-----QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARL  142 (156)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHH
T ss_pred             ccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHH
Confidence            345667777777777777775     88999999999999999999999999999999875 443       99999999


Q ss_pred             cCCHHHHHHHHhcC
Q psy7030         114 SEFVEAVELLLEYE  127 (377)
Q Consensus       114 ~g~~eiv~~Ll~~~  127 (377)
                      .|+.+++++|+++|
T Consensus       143 ~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         143 YGRNEVVSLMQANG  156 (156)
T ss_dssp             TTCHHHHHHHHHTC
T ss_pred             cCCHHHHHHHHhcC
Confidence            99999999999987

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=8.9e-12  Score=107.06  Aligned_cols=75  Identities=19%  Similarity=0.239  Sum_probs=70.5

Q ss_pred             HHHHHHHHcCCHHHHHHHHHhhccCCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcC-------hHHHHHHhc
Q psy7030          42 KKYLLSVERGDTATVRKCIKRAYRNHHIDINCVDPLGRSALTLAIEGENLEMTELLIVMGVEPK-------DALLQAINS  114 (377)
Q Consensus        42 ~~ll~Aa~~g~~~~v~~LL~~~~~~~g~dvn~~D~~G~TpLh~A~~~g~~~iv~~Ll~~ga~i~-------tpLh~A~~~  114 (377)
                      ..++.|+..++.+.++.+++.     |.+.+.+|..|+||||+|+..|+.+++++|+++|+|++       ||||+|+++
T Consensus       146 ~~l~~a~~~~~~~~~~~~~~~-----~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~  220 (228)
T d1k1aa_         146 SPLIHAVENNSLSMVQLLLQH-----GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR  220 (228)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHT-----TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred             hHHHHHHHhhhhhhhhhhhhh-----ccccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhC
Confidence            457889999999999999997     99999999999999999999999999999999999886       999999999


Q ss_pred             CCHHHHH
Q psy7030         115 EFVEAVE  121 (377)
Q Consensus       115 g~~eiv~  121 (377)
                      |+.|+||
T Consensus       221 ~~~divk  227 (228)
T d1k1aa_         221 RVIDILR  227 (228)
T ss_dssp             HHHHHHT
T ss_pred             CCccccC
Confidence            9999885