Diaphorina citri psyllid: psy7043

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
MRLFGLKNSFPVTQKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDTIPTYIR
ccEEcccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccEEccccEEEEccHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccEEcccccccccccccccccccccccccc
MRLFGLKNSFPVTQKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDTIPTYI*
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MRLFGLKNSFPVTQKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDTIPTYIR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0004028 [MF]3-chloroallyl aldehyde dehydrogenase activityprobableGO:0003824, GO:0016903, GO:0003674, GO:0016620, GO:0016491
GO:0004029 [MF]aldehyde dehydrogenase (NAD) activityprobableGO:0003824, GO:0016903, GO:0003674, GO:0016620, GO:0016491
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0042904 [BP]9-cis-retinoic acid biosynthetic processprobableGO:0019752, GO:0044249, GO:0044281, GO:0044283, GO:0042573, GO:0001523, GO:0042445, GO:0044710, GO:0044711, GO:0072330, GO:0042905, GO:0071704, GO:0065007, GO:0016101, GO:0016102, GO:0065008, GO:0006629, GO:1901576, GO:0006721, GO:0006720, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0044255, GO:0010817, GO:0034754, GO:0008610, GO:0044238, GO:0006082, GO:0046394, GO:0002138, GO:0016053, GO:0044237, GO:0008299, GO:0016114
GO:0004777 [MF]succinate-semialdehyde dehydrogenase (NAD+) activityprobableGO:0003824, GO:0016903, GO:0003674, GO:0016620, GO:0016491
GO:0042221 [BP]response to chemical stimulusprobableGO:0050896, GO:0008150
GO:1901564 [BP]organonitrogen compound metabolic processprobableGO:0071704, GO:0006807, GO:0008150, GO:0008152
GO:0042574 [BP]retinal metabolic processprobableGO:0044238, GO:0044710, GO:0006081, GO:0006721, GO:0006720, GO:0009987, GO:0044237, GO:0071704, GO:0008150, GO:0008152, GO:0016101, GO:0044255, GO:0001523, GO:0006629
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0042802 [MF]identical protein bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0051289 [BP]protein homotetramerizationprobableGO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0051260, GO:0051262, GO:0065003, GO:0044085, GO:0008150, GO:0016043, GO:0071840
GO:0051287 [MF]NAD bindingprobableGO:0050662, GO:0097159, GO:0000166, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:1901363, GO:1901265
GO:1901575 [BP]organic substance catabolic processprobableGO:0008150, GO:0071704, GO:0009056, GO:0008152
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0044248 [BP]cellular catabolic processprobableGO:0008150, GO:0009987, GO:0009056, GO:0008152, GO:0044237
GO:0043168 [MF]anion bindingprobableGO:0003674, GO:0005488, GO:0043167

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3ED6, chain A
Confidence level:very confident
Coverage over the Query: 1-167
View the alignment between query and template
View the model in PyMOL