Psyllid ID: psy7043

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MRLFGLKNSFPVTQKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDTIPTYIR
Secondary Structure (PSIPRED)
ccEEcccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccccEEccccEEEEccHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccEEcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEEHHHHHHHHHHHHHHHHHccEcccccccccEcccccHHHHHHHHHHHHHHHHcccEEEEcccEccccccEEEEEEEEEccccccHHHHHHHcccccHHHHHc
Coil and Loop (DISEMBL)
mrlfglknsfpvtqktqprpkvmpreaslnmvfESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGdgavsgvnvgplinkaqlTKVTRIVDDAIKKGAKVllggkpnptigelyyeptlitditpemdcyrfpcrlvdtiptyir
Flexible Loop (DISEMBL)
mrlfglknsfpvtqktqprpkvmPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGvnvgplinkaqltkvTRIVDDAIKKgakvllggkpnptigelyYEPTLITDITPEMDCYRFPCrlvdtiptyir
Low Complexity Region (SEG)
MRLFGLKNSFPVTQKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDTIPTYIR
Disordered region (IsUnstruct)
****************************LNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDTIPTY**
Disordered Region (DISOPRED)
MRLFGLKNSFPVTQKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDT*P**I*
Disordered Region (DISEMBL)
MRLFGLKNSFPVTQKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDTIPTYIR
Disordered Region (DISPRO)
MRLFGLKNSFPVTQKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDTIPTYIR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRLFGLKNSFPVTQKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFPCRLVDTIPTYIR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	167	2.2.26 [Sep-21-2011]
Q9SAK4	528	Succinate-semialdehyde de	yes	N/A	0.712	0.225	0.483	1e-28
P51650	523	Succinate-semialdehyde de	yes	N/A	0.718	0.229	0.483	9e-28
Q8BWF0	523	Succinate-semialdehyde de	yes	N/A	0.718	0.229	0.483	1e-27
P94428	462	Succinate-semialdehyde de	yes	N/A	0.718	0.259	0.483	2e-27
B9F3B6	527	Succinate-semialdehyde de	yes	N/A	0.730	0.231	0.447	3e-27
Q3MSM3	535	Succinate-semialdehyde de	N/A	N/A	0.718	0.224	0.475	7e-27
P51649	535	Succinate-semialdehyde de	yes	N/A	0.718	0.224	0.467	3e-26
Q6A2H1	535	Succinate-semialdehyde de	N/A	N/A	0.718	0.224	0.467	3e-26
Q6A2H0	535	Succinate-semialdehyde de	yes	N/A	0.718	0.224	0.467	3e-26
Q3MSM4	535	Succinate-semialdehyde de	N/A	N/A	0.718	0.224	0.467	3e-26

>sp|Q9SAK4|SSDH_ARATH Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2

 Score =  125 bits (315), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/120 (48%), Positives = 85/120 (70%), Gaps = 1/120 (0%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
           ++VF+ A++D+A++G LA+KFRN GQTC+ ANR L+ +  YD+F   FSE ++ L VGDG
Sbjct: 304 SIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDG 363

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN A + KV   V DA+ KGAK+++GGK + ++G  +YEPT+I D++  M
Sbjct: 364 FRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRH-SLGMTFYEPTVIRDVSDNM 422

Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4

>sp|P51650|SSDH_RAT Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2

 Score =  122 bits (307), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 88/122 (72%), Gaps = 2/122 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKI-KLLVVGDG 89
           +VF+SAN+D A+ GA+ASKFRN GQTC+ +NRFL+    +D F++KF+E + K L VG+G
Sbjct: 302 IVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFAEAMKKSLRVGNG 361

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN+  + KV + V+DA+ KGA V+ GGK + + G  ++EPTL++++T +M
Sbjct: 362 FEEGTTQGPLINEKAVEKVEKHVNDAVAKGATVVTGGKRHQSGGN-FFEPTLLSNVTRDM 420

Query: 150 DC 151
            C
Sbjct: 421 LC 422

Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q8BWF0|SSDH_MOUSE Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1

 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 88/122 (72%), Gaps = 2/122 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKI-KLLVVGDG 89
           +VF+SAN+D A+ GA+ASKFRN GQTC+ +NRFL+    +D F++KF+E + K L VG+G
Sbjct: 302 IVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFAEAMKKSLRVGNG 361

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN+  + KV + V+DA+ KGA V+ GGK + + G  ++EPTL++++T +M
Sbjct: 362 FEEGTTQGPLINEKAVEKVEKQVNDAVAKGATVVTGGKRHQSGGN-FFEPTLLSNVTRDM 420

Query: 150 DC 151
            C
Sbjct: 421 LC 422

Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|P94428|GABD_BACSU Succinate-semialdehyde dehydrogenase [NADP(+)] OS=Bacillus subtilis (strain 168) GN=gabD PE=1 SV=1

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 83/122 (68%), Gaps = 2/122 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A+IDLA++ A+ASK+RN GQTC+ ANR ++HE   DEF +K SE++  L VG+G 
Sbjct: 240 IVDEDADIDLAVEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLKVGNGL 299

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGG--KPNPTIGELYYEPTLITDITPE 148
             GVNVGP+INK    K+   +DDA++KGAKV+ GG    N   G  +  PT++TD+   
Sbjct: 300 EEGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGCYFVNPTVLTDVDTS 359

Query: 149 MD 150
           M+
Sbjct: 360 MN 361

Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 7

EC: 9

>sp|B9F3B6|SSDH_ORYSJ Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=2 SV=1

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 89/123 (72%), Gaps = 1/123 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A+ID+AI+G+LA+KFRN GQTC+ ANR L+ E  Y++F S F + ++ L VG+G 
Sbjct: 306 IVFDDADIDVAIKGSLAAKFRNSGQTCVCANRILVQEGIYEKFASAFIKAVQSLKVGNGL 365

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
               + GPLIN+A + KV + ++DA  KGA ++LGGK + ++G  +YEPT++ +++ +M 
Sbjct: 366 EESTSQGPLINEAAVQKVEKFINDATSKGANIMLGGKRH-SLGMSFYEPTVVGNVSNDML 424

Query: 151 CYR 153
            +R
Sbjct: 425 LFR 427

Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q3MSM3|SSDH_HYLLA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1

 Score =  119 bits (299), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/122 (47%), Positives = 86/122 (70%), Gaps = 2/122 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
           +VF+SAN+D A+ GALASKFRN GQTC+ +NRFL+    +D F+  F+E +K  L VG+G
Sbjct: 314 IVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGIHDAFVKAFAEAMKKNLHVGNG 373

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN+  + KV + V+DA+ KGA ++ GGK +  +G+ ++EPTL+ ++T +M
Sbjct: 374 FEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRH-QLGKNFFEPTLLCNVTQDM 432

Query: 150 DC 151
            C
Sbjct: 433 LC 434

Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).

Hylobates lar (taxid: 9580)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|P51649|SSDH_HUMAN Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 86/122 (70%), Gaps = 2/122 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
           +VF+SAN+D A+ GA+ASKFRN GQTC+ +N+FL+    +D F+  F+E +K  L VG+G
Sbjct: 314 IVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNG 373

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN+  + KV + V+DA+ KGA V+ GGK +  +G+ ++EPTL+ ++T +M
Sbjct: 374 FEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDM 432

Query: 150 DC 151
            C
Sbjct: 433 LC 434

Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q6A2H1|SSDH_GORGO Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 86/122 (70%), Gaps = 2/122 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
           +VF+SAN+D A+ GA+ASKFRN GQTC+ +N+FL+    +D F+  F+E +K  L VG+G
Sbjct: 314 IVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNG 373

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN+  + KV + V+DA+ KGA V+ GGK +  +G+ ++EPTL+ ++T +M
Sbjct: 374 FEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDM 432

Query: 150 DC 151
            C
Sbjct: 433 LC 434

Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).

Gorilla gorilla gorilla (taxid: 9595)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q6A2H0|SSDH_PANTR Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan troglodytes GN=ALDH5A1 PE=2 SV=1

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 86/122 (70%), Gaps = 2/122 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
           +VF+SAN+D A+ GA+ASKFRN GQTC+ +N+FL+    +D F+  F+E +K  L VG+G
Sbjct: 314 IVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNG 373

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN+  + KV + V+DA+ KGA V+ GGK +  +G+ ++EPTL+ ++T +M
Sbjct: 374 FEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDM 432

Query: 150 DC 151
            C
Sbjct: 433 LC 434

Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).

Pan troglodytes (taxid: 9598)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

>sp|Q3MSM4|SSDH_PANPA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1

 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 86/122 (70%), Gaps = 2/122 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
           +VF+SAN+D A+ GA+ASKFRN GQTC+ +N+FL+    +D F+  F+E +K  L VG+G
Sbjct: 314 IVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNG 373

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN+  + KV + V+DA+ KGA V+ GGK +  +G+ ++EPTL+ ++T +M
Sbjct: 374 FEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDM 432

Query: 150 DC 151
            C
Sbjct: 433 LC 434

Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).

Pan paniscus (taxid: 9597)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
242007010	516	Succinate semialdehyde dehydrogenase, pu	0.736	0.238	0.593	1e-37
193652450	504	PREDICTED: succinate-semialdehyde dehydr	0.730	0.242	0.581	2e-35
91091444	496	PREDICTED: similar to succinate semialde	0.730	0.245	0.573	3e-35
170034346	511	succinate semialdehyde dehydrogenase, mi	0.730	0.238	0.557	4e-35
347969394	488	AGAP003165-PA [Anopheles gambiae str. PE	0.730	0.25	0.573	2e-34
312385184	601	hypothetical protein AND_01074 [Anophele	0.730	0.202	0.565	4e-34
157107083	514	succinate semialdehyde dehydrogenase [Ae	0.730	0.237	0.532	4e-33
340720060	511	PREDICTED: succinate-semialdehyde dehydr	0.730	0.238	0.528	2e-32
350410856	511	PREDICTED: succinate-semialdehyde dehydr	0.730	0.238	0.520	2e-32
198453803	505	GA18355 [Drosophila pseudoobscura pseudo	0.730	0.241	0.5	4e-32

>gi|242007010|ref|XP_002424335.1| Succinate semialdehyde dehydrogenase, putative [Pediculus humanus corporis] gi|212507735|gb|EEB11597.1| Succinate semialdehyde dehydrogenase, putative [Pediculus humanus corporis]

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 96/123 (78%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF SA +D A++GA+ASKFRNCGQTC+SANRFLI E+  DEFISK S K+  L  GDG+
Sbjct: 290 IVFNSAKLDEAVEGAMASKFRNCGQTCVSANRFLIQEEVVDEFISKLSSKLDSLTCGDGS 349

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             G+++GPLIN+ Q+ KV+ +VDDAI KGAKV+ GGK    +G L+Y PT++T+I PEM+
Sbjct: 350 KPGISMGPLINEMQINKVSSLVDDAISKGAKVIKGGKKLTELGNLFYAPTILTNIKPEMN 409

Query: 151 CYR 153
           CY 
Sbjct: 410 CYN 412

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193652450|ref|XP_001949031.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like isoform 1 [Acyrthosiphon pisum]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 93/122 (76%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF  A+ID A+ GA+ASKFRNCGQTC+SANRF+I +  + EF+ K   ++  LV+GDG 
Sbjct: 281 VVFNEADIDKAVAGAMASKFRNCGQTCVSANRFIIQKNVFTEFVDKLKVEMDKLVMGDGK 340

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
            SGVN+GPLIN AQ  KV RIV+DA  KGAK++ GGK   ++GE +YEPTLIT++T +M 
Sbjct: 341 TSGVNLGPLINFAQADKVDRIVNDAKNKGAKIITGGKRALSVGERFYEPTLITNVTKDMA 400

Query: 151 CY 152
           CY
Sbjct: 401 CY 402

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91091444|ref|XP_972566.1| PREDICTED: similar to succinate semialdehyde dehydrogenase, mitochondrial [Tribolium castaneum] gi|270000977|gb|EEZ97424.1| hypothetical protein TcasGA2_TC011254 [Tribolium castaneum]

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 91/122 (74%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF SAN+  A++GA+ASKFRNCGQTC+S+NRFL+  K YD F+    ++IK L +G+G 
Sbjct: 275 IVFNSANVGHAVKGAMASKFRNCGQTCVSSNRFLVQGKVYDSFVGSLVKEIKSLKIGNGQ 334

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             GVNVGPLIN+AQ  KV+ +V+DA+ KGAKVL GGK     GEL+YEPT++TDI   M 
Sbjct: 335 ECGVNVGPLINQAQFGKVSDLVEDAVSKGAKVLTGGKAARQFGELFYEPTVLTDIKENMR 394

Query: 151 CY 152
            Y
Sbjct: 395 VY 396

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170034346|ref|XP_001845035.1| succinate semialdehyde dehydrogenase, mitochondrial [Culex quinquefasciatus] gi|167875668|gb|EDS39051.1| succinate semialdehyde dehydrogenase, mitochondrial [Culex quinquefasciatus]

 Score =  152 bits (384), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 68/122 (55%), Positives = 95/122 (77%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+SA++D A+ GA+ SKFRNCGQTCISANRFLI ++ +DEFI+K +EK+K L +GDG+
Sbjct: 289 IVFKSADLDKAVTGAMNSKFRNCGQTCISANRFLIQDEIHDEFIAKLTEKLKALKIGDGS 348

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             GV +GPLIN AQ+ KV+  V+DA +KGAK++ GGKP    G L++EPT++T +  +M 
Sbjct: 349 QDGVQIGPLINHAQIKKVSHFVEDAQQKGAKIIYGGKPLTNHGSLFFEPTIVTHLRDDML 408

Query: 151 CY 152
            Y
Sbjct: 409 LY 410

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347969394|ref|XP_312856.4| AGAP003165-PA [Anopheles gambiae str. PEST] gi|333468505|gb|EAA08422.4| AGAP003165-PA [Anopheles gambiae str. PEST]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 93/122 (76%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+SA+++ A+ GA+ SKFRNCGQTCISANRFLI ++ +DEF++K  E+I+ L +GDG+
Sbjct: 266 IVFKSADMEKALTGAMNSKFRNCGQTCISANRFLIQDEVHDEFVAKLIERIRKLAIGDGS 325

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             GV +GPLIN+AQL KV + V DA  KGAKV  GGK  P +G LYYEPT++TD+   M 
Sbjct: 326 RDGVQIGPLINQAQLKKVDQFVQDAKDKGAKVHTGGKTLPELGPLYYEPTVVTDLRDNML 385

Query: 151 CY 152
            Y
Sbjct: 386 LY 387

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312385184|gb|EFR29742.1| hypothetical protein AND_01074 [Anopheles darlingi]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/122 (56%), Positives = 93/122 (76%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+SA+++ A+ GA+ SKFRNCGQTCISANRFLI ++ +DEF+ K  E+I  L +GDG+
Sbjct: 267 IVFKSADMEKAVTGAMNSKFRNCGQTCISANRFLIQDEIHDEFVEKLIERIGKLAIGDGS 326

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             G+ +GPLIN+AQLTKV R V DA +KGA V  GG+  P  GELYYEPT++T++  +M 
Sbjct: 327 REGIQIGPLINRAQLTKVDRFVTDAKEKGATVRHGGRTLPQHGELYYEPTVVTNLRDDML 386

Query: 151 CY 152
            Y
Sbjct: 387 LY 388

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157107083|ref|XP_001649617.1| succinate semialdehyde dehydrogenase [Aedes aegypti] gi|108879680|gb|EAT43905.1| AAEL004685-PA [Aedes aegypti]

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 92/122 (75%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+SA++D A+ GA+ SKFRNCGQTCISANRFLI E  +D+FI++  E++K L +GDG+
Sbjct: 292 IVFDSADLDKAVAGAMNSKFRNCGQTCISANRFLIQEGIHDKFIAQLMERVKALKIGDGS 351

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             G+ +GPLIN AQ+ KV+  VDDA +KGA+V+ GG+     G L+YEPT++T +  +M 
Sbjct: 352 QEGIQIGPLINHAQVDKVSNFVDDAKQKGAQVICGGRKLSDKGALFYEPTIVTHLRDDMK 411

Query: 151 CY 152
            Y
Sbjct: 412 LY 413

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720060|ref|XP_003398461.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Bombus terrestris]

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/123 (52%), Positives = 91/123 (73%), Gaps = 1/123 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLV-VGDG 89
           +VF+SA++D+A+ GA+ASKFRN GQTC+SANRF +H  ++D+FI  F  +IK  + +GDG
Sbjct: 286 IVFDSADLDIAVHGAMASKFRNSGQTCVSANRFFVHSSKFDQFIEMFLSRIKSEIKMGDG 345

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
           +  GV  GPLI ++QL  V  +V DA++KGAKV  GG P P +G L+Y PTL+TD+T +M
Sbjct: 346 SKKGVTHGPLIKESQLNMVHALVTDAVEKGAKVHCGGTPLPELGPLFYAPTLMTDVTKDM 405

Query: 150 DCY 152
             Y
Sbjct: 406 QIY 408

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350410856|ref|XP_003489158.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Bombus impatiens]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/123 (52%), Positives = 91/123 (73%), Gaps = 1/123 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLV-VGDG 89
           +VF+SA++D+A+ GA+ASKFRN GQTC+SANRF +H  ++D+FI  F  +IK  + +GDG
Sbjct: 286 IVFDSADLDIAVHGAMASKFRNSGQTCVSANRFFVHSSKFDQFIEMFLSRIKSEIKMGDG 345

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
           +  GV  GPLI ++QL  +  +V DA++KGAKV  GG P P +G L+Y PTL+TD+T +M
Sbjct: 346 SKKGVTHGPLIKESQLNMIHALVTDAVEKGAKVHCGGTPLPELGPLFYAPTLMTDVTKDM 405

Query: 150 DCY 152
             Y
Sbjct: 406 QIY 408

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198453803|ref|XP_001359345.2| GA18355 [Drosophila pseudoobscura pseudoobscura] gi|198132520|gb|EAL28490.2| GA18355 [Drosophila pseudoobscura pseudoobscura]

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 90/122 (73%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+SAN++ A++GA+ASKFRNCGQTC+SANRF + +  Y++F+++  ++++ L +GDG 
Sbjct: 281 IVFDSANVEKAVEGAMASKFRNCGQTCVSANRFFVQDGVYEKFVTQLKQRVEALKIGDGK 340

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
            + V +GPLIN+ Q  KV   V+DA  K A V+ GGKP P+IG L+Y PT+ITD+ P   
Sbjct: 341 ANDVQIGPLINQMQFKKVGGFVEDARGKKANVITGGKPLPSIGPLFYAPTIITDVPPTAQ 400

Query: 151 CY 152
            Y
Sbjct: 401 LY 402

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
FB|FBgn0039349	509	Ssadh "Succinic semialdehyde d	0.730	0.239	0.483	4.4e-31
TAIR|locus:2206405	528	ALDH5F1 "AT1G79440" [Arabidops	0.712	0.225	0.483	2e-27
UNIPROTKB|F1RUE3	537	ALDH5A1 "Uncharacterized prote	0.730	0.227	0.491	2.2e-26
MGI|MGI:2441982	523	Aldh5a1 "aldhehyde dehydrogena	0.718	0.229	0.483	2.5e-26
RGD|621422	523	Aldh5a1 "aldehyde dehydrogenas	0.718	0.229	0.483	2.5e-26
UNIPROTKB|P51650	523	Aldh5a1 "Succinate-semialdehyd	0.718	0.229	0.483	2.5e-26
CGD|CAL0002758	509	UGA2 [Candida albicans (taxid:	0.712	0.233	0.458	4.7e-26
UNIPROTKB|Q59T88	509	UGA2 "Putative uncharacterized	0.712	0.233	0.458	4.7e-26
UNIPROTKB|E1BDP3	526	ALDH5A1 "Uncharacterized prote	0.718	0.228	0.491	9.2e-26
UNIPROTKB|Q3MSM3	535	ALDH5A1 "Succinate-semialdehyd	0.718	0.224	0.475	9.8e-26

FB|FBgn0039349 Ssadh "Succinic semialdehyde dehydrogenase" [Drosophila melanogaster (taxid:7227)]

 Score = 343 (125.8 bits), Expect = 4.4e-31, P = 4.4e-31
 Identities = 59/122 (48%), Positives = 87/122 (71%)

Query:    31 MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
             +VF+SA+I+ A+ GA+ASKFRNCGQTC+SANRF + +  YD+F+ +  ++++ L +GDG 
Sbjct:   285 IVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQ 344

Query:    91 VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
                V +GPLIN+ Q  KV+  V+DA  K A ++LGG+P P  G L+Y PT++TD+ P   
Sbjct:   345 GCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQ 404

Query:   151 CY 152
              Y
Sbjct:   405 LY 406

GO:0004777 "succinate-semialdehyde dehydrogenase (NAD+) activity" evidence=ISS;IDA

GO:0009450 "gamma-aminobutyric acid catabolic process" evidence=ISS

GO:0009013 "succinate-semialdehyde dehydrogenase [NAD(P)+

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISS

TAIR|locus:2206405 ALDH5F1 "AT1G79440" [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 2.0e-27, P = 2.0e-27
 Identities = 58/120 (48%), Positives = 85/120 (70%)

Query:    30 NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
             ++VF+ A++D+A++G LA+KFRN GQTC+ ANR L+ +  YD+F   FSE ++ L VGDG
Sbjct:   304 SIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKLEVGDG 363

Query:    90 AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                G   GPLIN A + KV   V DA+ KGAK+++GGK + ++G  +YEPT+I D++  M
Sbjct:   364 FRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRH-SLGMTFYEPTVIRDVSDNM 422

GO:0004028 "3-chloroallyl aldehyde dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004777 "succinate-semialdehyde dehydrogenase (NAD+) activity" evidence=ISS;IDA

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0006540 "glutamate decarboxylation to succinate" evidence=IMP;IDA

GO:0009450 "gamma-aminobutyric acid catabolic process" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009408 "response to heat" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0072593 "reactive oxygen species metabolic process" evidence=IMP

GO:0005507 "copper ion binding" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006333 "chromatin assembly or disassembly" evidence=RCA

UNIPROTKB|F1RUE3 ALDH5A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 303 (111.7 bits), Expect = 2.2e-26, P = 2.2e-26
 Identities = 61/124 (49%), Positives = 86/124 (69%)

Query:    31 MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
             +VF+SAN+D A+ GA+ SKFRN GQTC+ +NRFL+    +D F+ KF+E IK  L VG+G
Sbjct:   314 IVFDSANVDQAVAGAMVSKFRNSGQTCVCSNRFLVQRGIHDSFVKKFAEAIKTNLCVGNG 373

Query:    90 AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                    GPLIN+  + KV + V DAI KGA V+ GGK +  +G+ ++EPTL++++T EM
Sbjct:   374 FEERTTQGPLINEKAVEKVEKHVIDAISKGATVVTGGKRHQ-VGKNFFEPTLLSNVTQEM 432

Query:   150 DCYR 153
              C R
Sbjct:   433 LCSR 436

GO:0046459 "short-chain fatty acid metabolic process" evidence=IEA

GO:0042135 "neurotransmitter catabolic process" evidence=IEA

GO:0022904 "respiratory electron transport chain" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0006681 "galactosylceramide metabolic process" evidence=IEA

GO:0006678 "glucosylceramide metabolic process" evidence=IEA

GO:0006650 "glycerophospholipid metabolic process" evidence=IEA

GO:0006541 "glutamine metabolic process" evidence=IEA

GO:0006536 "glutamate metabolic process" evidence=IEA

GO:0006105 "succinate metabolic process" evidence=IEA

GO:0006083 "acetate metabolic process" evidence=IEA

GO:0006006 "glucose metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009450 "gamma-aminobutyric acid catabolic process" evidence=IEA

GO:0009013 "succinate-semialdehyde dehydrogenase [NAD(P)+

MGI|MGI:2441982 Aldh5a1 "aldhehyde dehydrogenase family 5, subfamily A1" [Mus musculus (taxid:10090)]

 Score = 302 (111.4 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 59/122 (48%), Positives = 88/122 (72%)

Query:    31 MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
             +VF+SAN+D A+ GA+ASKFRN GQTC+ +NRFL+    +D F++KF+E +K  L VG+G
Sbjct:   302 IVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFAEAMKKSLRVGNG 361

Query:    90 AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                G   GPLIN+  + KV + V+DA+ KGA V+ GGK + + G  ++EPTL++++T +M
Sbjct:   362 FEEGTTQGPLINEKAVEKVEKQVNDAVAKGATVVTGGKRHQSGGN-FFEPTLLSNVTRDM 420

Query:   150 DC 151
              C
Sbjct:   421 LC 422

GO:0004777 "succinate-semialdehyde dehydrogenase (NAD+) activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0006006 "glucose metabolic process" evidence=IMP

GO:0006083 "acetate metabolic process" evidence=IMP

GO:0006105 "succinate metabolic process" evidence=ISO;IMP

GO:0006536 "glutamate metabolic process" evidence=IMP

GO:0006541 "glutamine metabolic process" evidence=IMP

GO:0006650 "glycerophospholipid metabolic process" evidence=IMP

GO:0006678 "glucosylceramide metabolic process" evidence=IMP

GO:0006681 "galactosylceramide metabolic process" evidence=IMP

GO:0006749 "glutathione metabolic process" evidence=IMP

GO:0007417 "central nervous system development" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0009013 "succinate-semialdehyde dehydrogenase [NAD(P)+

GO:0009448 "gamma-aminobutyric acid metabolic process" evidence=IMP

GO:0009450 "gamma-aminobutyric acid catabolic process" evidence=ISO;IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0022904 "respiratory electron transport chain" evidence=IMP

GO:0031406 "carboxylic acid binding" evidence=ISO

GO:0042135 "neurotransmitter catabolic process" evidence=IMP

GO:0046459 "short-chain fatty acid metabolic process" evidence=IMP

GO:0051287 "NAD binding" evidence=ISO

GO:0051289 "protein homotetramerization" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA;ISO

RGD|621422 Aldh5a1 "aldehyde dehydrogenase 5 family, member A1" [Rattus norvegicus (taxid:10116)]

 Score = 302 (111.4 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 59/122 (48%), Positives = 88/122 (72%)

Query:    31 MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
             +VF+SAN+D A+ GA+ASKFRN GQTC+ +NRFL+    +D F++KF+E +K  L VG+G
Sbjct:   302 IVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFAEAMKKSLRVGNG 361

Query:    90 AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                G   GPLIN+  + KV + V+DA+ KGA V+ GGK + + G  ++EPTL++++T +M
Sbjct:   362 FEEGTTQGPLINEKAVEKVEKHVNDAVAKGATVVTGGKRHQSGGN-FFEPTLLSNVTRDM 420

Query:   150 DC 151
              C
Sbjct:   421 LC 422

GO:0004777 "succinate-semialdehyde dehydrogenase (NAD+) activity" evidence=ISO;ISS;IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO;ISS;IDA

GO:0006006 "glucose metabolic process" evidence=IEA;ISO

GO:0006083 "acetate metabolic process" evidence=IEA;ISO

GO:0006105 "succinate metabolic process" evidence=IEA;ISO;IDA

GO:0006536 "glutamate metabolic process" evidence=IEA;ISO

GO:0006541 "glutamine metabolic process" evidence=IEA;ISO

GO:0006650 "glycerophospholipid metabolic process" evidence=IEA;ISO

GO:0006678 "glucosylceramide metabolic process" evidence=IEA;ISO

GO:0006681 "galactosylceramide metabolic process" evidence=IEA;ISO

GO:0006749 "glutathione metabolic process" evidence=IEA;ISO

GO:0007417 "central nervous system development" evidence=ISO;ISS;TAS

GO:0009013 "succinate-semialdehyde dehydrogenase [NAD(P)+

GO:0009448 "gamma-aminobutyric acid metabolic process" evidence=ISO

GO:0009450 "gamma-aminobutyric acid catabolic process" evidence=IEA;ISO;ISS;TAS

GO:0009791 "post-embryonic development" evidence=IEA;ISO

GO:0022904 "respiratory electron transport chain" evidence=IEA;ISO

GO:0031406 "carboxylic acid binding" evidence=IPI

GO:0042135 "neurotransmitter catabolic process" evidence=IEA;ISO

GO:0046459 "short-chain fatty acid metabolic process" evidence=IEA;ISO

GO:0051287 "NAD binding" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IDA

UNIPROTKB|P51650 Aldh5a1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 302 (111.4 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 59/122 (48%), Positives = 88/122 (72%)

Query:    31 MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
             +VF+SAN+D A+ GA+ASKFRN GQTC+ +NRFL+    +D F++KF+E +K  L VG+G
Sbjct:   302 IVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFAEAMKKSLRVGNG 361

Query:    90 AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                G   GPLIN+  + KV + V+DA+ KGA V+ GGK + + G  ++EPTL++++T +M
Sbjct:   362 FEEGTTQGPLINEKAVEKVEKHVNDAVAKGATVVTGGKRHQSGGN-FFEPTLLSNVTRDM 420

Query:   150 DC 151
              C
Sbjct:   421 LC 422

GO:0009013 "succinate-semialdehyde dehydrogenase [NAD(P)+

CGD|CAL0002758 UGA2 [Candida albicans (taxid:5476)]

 Score = 299 (110.3 bits), Expect = 4.7e-26, P = 4.7e-26
 Identities = 55/120 (45%), Positives = 83/120 (69%)

Query:    31 MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
             + F+  ++D A+ GA+ASKFR+ GQTC+ ANR  +HEK YDEF  KF +K+K   V+G+ 
Sbjct:   285 IAFDDVDVDKAVNGAIASKFRSSGQTCVCANRIFVHEKIYDEFAKKFVDKLKNETVLGNP 344

Query:    90 AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               SGV  GP+I+   + KV + ++DA+ KGA +LLGG   P +GE +++ T++ D+T EM
Sbjct:   345 LASGVTHGPVIHDRSMKKVRQHIEDAVDKGATILLGGSKRPDLGENFHDLTVLGDVTTEM 404

GO:0009013 "succinate-semialdehyde dehydrogenase [NAD(P)+

GO:0005829 "cytosol" evidence=IEA

UNIPROTKB|Q59T88 UGA2 "Putative uncharacterized protein UGA22" [Candida albicans SC5314 (taxid:237561)]

 Score = 299 (110.3 bits), Expect = 4.7e-26, P = 4.7e-26
 Identities = 55/120 (45%), Positives = 83/120 (69%)

Query:    31 MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
             + F+  ++D A+ GA+ASKFR+ GQTC+ ANR  +HEK YDEF  KF +K+K   V+G+ 
Sbjct:   285 IAFDDVDVDKAVNGAIASKFRSSGQTCVCANRIFVHEKIYDEFAKKFVDKLKNETVLGNP 344

Query:    90 AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               SGV  GP+I+   + KV + ++DA+ KGA +LLGG   P +GE +++ T++ D+T EM
Sbjct:   345 LASGVTHGPVIHDRSMKKVRQHIEDAVDKGATILLGGSKRPDLGENFHDLTVLGDVTTEM 404

GO:0009013 "succinate-semialdehyde dehydrogenase [NAD(P)+

UNIPROTKB|E1BDP3 ALDH5A1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 297 (109.6 bits), Expect = 9.2e-26, P = 9.2e-26
 Identities = 60/122 (49%), Positives = 85/122 (69%)

Query:    31 MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
             +VF+SAN+D A+ GA+ASKFRN GQTC+ +NRFL+    +D F+ KF+E IK  L VG+G
Sbjct:   305 IVFDSANVDQAVAGAMASKFRNSGQTCVCSNRFLVQSGIHDSFVKKFAEAIKTNLHVGNG 364

Query:    90 AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                    GPLIN   + KV + V DAI KGA V+ GGK +  +G+ ++EPTL++++T +M
Sbjct:   365 FDERTTQGPLINAKAVEKVEKHVSDAISKGATVVTGGKRHH-VGKNFFEPTLLSNVTRDM 423

Query:   150 DC 151
              C
Sbjct:   424 LC 425

GO:0046459 "short-chain fatty acid metabolic process" evidence=IEA

GO:0042135 "neurotransmitter catabolic process" evidence=IEA

GO:0022904 "respiratory electron transport chain" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0006681 "galactosylceramide metabolic process" evidence=IEA

GO:0006678 "glucosylceramide metabolic process" evidence=IEA

GO:0006650 "glycerophospholipid metabolic process" evidence=IEA

GO:0006541 "glutamine metabolic process" evidence=IEA

GO:0006536 "glutamate metabolic process" evidence=IEA

GO:0006105 "succinate metabolic process" evidence=IEA

GO:0006083 "acetate metabolic process" evidence=IEA

GO:0006006 "glucose metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009450 "gamma-aminobutyric acid catabolic process" evidence=IEA

GO:0009013 "succinate-semialdehyde dehydrogenase [NAD(P)+

UNIPROTKB|Q3MSM3 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Hylobates lar (taxid:9580)]

 Score = 297 (109.6 bits), Expect = 9.8e-26, P = 9.8e-26
 Identities = 58/122 (47%), Positives = 86/122 (70%)

Query:    31 MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
             +VF+SAN+D A+ GALASKFRN GQTC+ +NRFL+    +D F+  F+E +K  L VG+G
Sbjct:   314 IVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGIHDAFVKAFAEAMKKNLHVGNG 373

Query:    90 AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                G   GPLIN+  + KV + V+DA+ KGA ++ GGK +  +G+ ++EPTL+ ++T +M
Sbjct:   374 FEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRHQ-LGKNFFEPTLLCNVTQDM 432

Query:   150 DC 151
              C
Sbjct:   433 LC 434

GO:0004777 "succinate-semialdehyde dehydrogenase (NAD+) activity" evidence=ISS

GO:0007417 "central nervous system development" evidence=ISS

GO:0009450 "gamma-aminobutyric acid catabolic process" evidence=ISS

GO:0051289 "protein homotetramerization" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	167
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	2e-59
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	1e-52
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	3e-45
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	3e-44
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	3e-44
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	3e-41
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	4e-41
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	5e-41
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	8e-40
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	7e-39
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	5e-37
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	8e-37
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	1e-35
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	2e-34
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	2e-33
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	4e-32
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	1e-31
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	2e-31
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	2e-31
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	9e-31
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	5e-30
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	9e-30
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	2e-29
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	3e-29
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	4e-29
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	7e-29
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	3e-28
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	5e-28
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	6e-28
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	8e-28
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	2e-27
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	4e-27
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	8e-27
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	3e-26
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	1e-25
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	1e-25
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	2e-25
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	4e-25
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	4e-25
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	2e-24
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	2e-24
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	3e-24
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	6e-24
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	7e-24
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	9e-24
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	1e-22
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	1e-22
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	1e-22
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	2e-22
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	2e-22
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	2e-22
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	3e-22
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	4e-22
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	4e-22
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	5e-22
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	7e-22
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	8e-22
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	9e-22
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	1e-21
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	2e-21
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	4e-21
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	5e-21
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	8e-21
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	1e-20
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	2e-20
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	5e-20
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	2e-19
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	4e-19
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	4e-19
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	3e-18
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	5e-18
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	1e-17
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	3e-16
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	5e-16
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	8e-16
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	3e-14
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	4e-14
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	6e-14
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	9e-14
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	7e-13
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	1e-12
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	2e-12
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	3e-12
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	3e-12
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	2e-11
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	4e-11
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	4e-11
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	2e-09
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	3e-09
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	2e-08
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	3e-08
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	4e-08
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	5e-08
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	2e-07
PRK11903	521	PRK11903, PRK11903, aldehyde dehydrogenase; Provis	2e-07
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	3e-07
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	1e-06
PRK11563	675	PRK11563, PRK11563, bifunctional aldehyde dehydrog	2e-06
cd07126	489	cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb	3e-04
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	6e-04

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  190 bits (485), Expect = 2e-59
 Identities = 62/122 (50%), Positives = 86/122 (70%), Gaps = 1/122 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           VF+ A++D A+ GA+ASKFRN GQTC+ ANR  +HE  YDEF+ K  E++K L VG+G  
Sbjct: 235 VFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLD 294

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
            G ++GPLIN+  + KV  +V+DA+ KGAKVL GGK    +G  +YEPT++TD+T +M  
Sbjct: 295 EGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKR-LGLGGYFYEPTVLTDVTDDMLI 353

Query: 152 YR 153
             
Sbjct: 354 MN 355

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  174 bits (442), Expect = 1e-52
 Identities = 66/123 (53%), Positives = 91/123 (73%), Gaps = 1/123 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A++D+A++GALASKFRN GQTC+ ANR L+ E  YD+F   FS+ ++ LVVGDG 
Sbjct: 277 IVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGF 336

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             GV  GPLIN+A + KV   V DA+ KGAKVLLGGK + ++G  +YEPT++ D+T +M 
Sbjct: 337 EEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRH-SLGGTFYEPTVLGDVTEDML 395

Query: 151 CYR 153
            +R
Sbjct: 396 IFR 398

Length = 498

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  153 bits (389), Expect = 3e-45
 Identities = 57/121 (47%), Positives = 86/121 (71%), Gaps = 1/121 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A++D A++GA+ASKFRN GQTC+ ANR  +H+  YDEF  K +E +K L VG+G 
Sbjct: 235 IVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGL 294

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             GV  GPLIN+  + KV + + DA++KGAKV+ GGK    +G  ++EPT+++++T +M 
Sbjct: 295 DEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGK-RHELGGNFFEPTVLSNVTADML 353

Query: 151 C 151
            
Sbjct: 354 V 354

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  150 bits (382), Expect = 3e-44
 Identities = 50/126 (39%), Positives = 79/126 (62%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  +VF+ A++D A++GA+   F N GQ C +A+R L+HE  YDEF+ +  E++K L VG
Sbjct: 210 SPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVG 269

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +      ++GPLI+ AQL +V   ++DA  +GAK+L GGK        +  PT++TD+ P
Sbjct: 270 NPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDP 329

Query: 148 EMDCYR 153
           +M   +
Sbjct: 330 DMPIAQ 335

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  151 bits (383), Expect = 3e-44
 Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 1/124 (0%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +VF+ A++D A++GA+   F N GQ C + +R L+HE  YDEF+ +  E  K L VGD 
Sbjct: 242 LIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKVGDP 301

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                ++GPLI+K Q  +V   ++DA ++GAK+L GG+     G  + EPT++ D+TP+M
Sbjct: 302 LDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKG-YFVEPTVLADVTPDM 360

Query: 150 DCYR 153
              +
Sbjct: 361 RIAQ 364

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  142 bits (360), Expect = 3e-41
 Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 1/122 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++D A++ A+  + +N GQ+CI+A RF++HE  YDEF+ KF E +  L VGD   
Sbjct: 213 VLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMD 272

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
              ++GPL  K    ++   V++A+  GA +LLGGK     G  +Y PT++TD+TP M  
Sbjct: 273 EDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGA-FYPPTVLTDVTPGMPA 331

Query: 152 YR 153
           Y 
Sbjct: 332 YD 333

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  143 bits (364), Expect = 4e-41
 Identities = 54/122 (44%), Positives = 78/122 (63%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++D A  GA+ + F N GQ CIS  R  +HE  YDEF+  F   ++ + +G G  
Sbjct: 270 VLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYD 329

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
              ++G LI++AQL  V+  VDDA+ KGA VL GGK  P +G L+YEPT++T +TP+M+ 
Sbjct: 330 YSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMEL 389

Query: 152 YR 153
            R
Sbjct: 390 AR 391

Length = 524

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  142 bits (361), Expect = 5e-41
 Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 3/124 (2%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V E A++D A+  A+   F N GQ C +A+R ++HE  YDEF+ +   +   L VGD 
Sbjct: 249 AIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDP 308

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                ++GPLI++ QL +V   ++DA+ +GA++L GGK     G  + EPT++  +TP+M
Sbjct: 309 LDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP---GGYFVEPTILEGVTPDM 365

Query: 150 DCYR 153
              R
Sbjct: 366 RIAR 369

Length = 472

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  139 bits (352), Expect = 8e-40
 Identities = 52/122 (42%), Positives = 78/122 (63%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V E A++D A  GA+ + F N GQ C+S  R  +HE  YDEF+ +F  + + L +G    
Sbjct: 234 VLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALD 293

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
            G ++G LI++AQL +VT  VDDA+ KGA VL GG+  P +G  +YEPT++T +T +M+ 
Sbjct: 294 YGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMEL 353

Query: 152 YR 153
           + 
Sbjct: 354 FA 355

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  137 bits (346), Expect = 7e-39
 Identities = 48/120 (40%), Positives = 77/120 (64%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V + A++DLA++  + S+  NCGQ C  A R  +HE  YDEF+ K  EK+K + VGD  
Sbjct: 250 IVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPF 309

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
            +  ++GPL+N+A L KV  +V+ A++ GA +L GGK        +YEPT++T++  +M+
Sbjct: 310 DAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDME 369

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  131 bits (332), Expect = 5e-37
 Identities = 51/122 (41%), Positives = 76/122 (62%), Gaps = 4/122 (3%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++DLA+  A    F + GQ C++A R L+HE  YDEF+ K   K K L VGD   
Sbjct: 217 VLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRD 276

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
               +GPLIN+ Q+ +V  IV+DA+  GA++L GG        L+Y+PT+++D+TP+M  
Sbjct: 277 PDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYE----GLFYQPTVLSDVTPDMPI 332

Query: 152 YR 153
           +R
Sbjct: 333 FR 334

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  131 bits (332), Expect = 8e-37
 Identities = 47/126 (37%), Positives = 76/126 (60%), Gaps = 5/126 (3%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N+VF+ A++D A+ G +A  F   GQTC++ +R L+    YDEF+ +   + + + VG
Sbjct: 233 SPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVG 292

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL----YYEPTLIT 143
           D       +GPL  + QL KV R V  A ++GA+VL GG+  P+  +L    ++EPT++ 
Sbjct: 293 DPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGER-PSGADLGAGYFFEPTILA 351

Query: 144 DITPEM 149
           D+T +M
Sbjct: 352 DVTNDM 357

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  128 bits (323), Expect = 1e-35
 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 1/122 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   A+++ A   A+     N GQTCIS  R  +HE  YDEF+++   K + L  G   +
Sbjct: 235 VLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDI 294

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
              ++GP+    QL  V R VDDA+ KGAK L GG      G  +YEPT++TD+  +MD 
Sbjct: 295 GDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGAR-SNGGGPFYEPTVLTDVPHDMDV 353

Query: 152 YR 153
            R
Sbjct: 354 MR 355

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  124 bits (315), Expect = 2e-34
 Identities = 48/129 (37%), Positives = 60/129 (46%), Gaps = 8/129 (6%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V    +ID          F N GQ C +  R  +HE  YDEF        K  VVGDG  
Sbjct: 230 VLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLD 289

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
            G  +GP+ NK Q  KV  +V+DA  KGAKVL GG+P    G  +  PT++ D       
Sbjct: 290 PGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPG-YFIPPTIVDDPPEGS-- 346

Query: 152 YRFPCRLVD 160
                R+VD
Sbjct: 347 -----RIVD 350

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  122 bits (308), Expect = 2e-33
 Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 3/125 (2%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
           N+VF  A++D A+  A+ S F N G+ C++ +R L+    YDEF+ +F E+ K L VGD 
Sbjct: 233 NIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDP 292

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTI---GELYYEPTLITDIT 146
                 VGPLI+K  L KV   V+ A  +GA +L GG         G  + EPT+IT + 
Sbjct: 293 LDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLD 352

Query: 147 PEMDC 151
            +   
Sbjct: 353 NDSRV 357

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  118 bits (298), Expect = 4e-32
 Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 1/123 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V  SA++D A + A+ ++ +N GQ+CI+A RF++H   YD F  KF  ++  L VGD  
Sbjct: 239 IVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPT 298

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
               +VGPL  +    +V + VDDA+  GA +L GGK  P     +Y PT+ITDITP+M 
Sbjct: 299 DPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKR-PDGPGWFYPPTVITDITPDMR 357

Query: 151 CYR 153
            Y 
Sbjct: 358 LYT 360

Length = 457

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  117 bits (295), Expect = 1e-31
 Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 4/122 (3%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++DLA        F + GQ C++A R L+HE   D + +K + K K L VGD A 
Sbjct: 228 VLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPAT 287

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
             V +GPLIN  QL +V  IVDD++  GA++  GG    T   L+Y PT+++ + P M  
Sbjct: 288 GQVALGPLINARQLDRVHAIVDDSVAAGARLEAGG----TYDGLFYRPTVLSGVKPGMPA 343

Query: 152 YR 153
           + 
Sbjct: 344 FD 345

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  117 bits (295), Expect = 2e-31
 Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 3/123 (2%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N+VF+ A++D A++ A    F N GQ C + +R  + E  YDEF+ KF  + +  VVG
Sbjct: 256 SPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVG 315

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDIT 146
           D        GP ++KAQ  K+   ++   K+GA +L GG+ + + G  Y+ +PT+ TD+ 
Sbjct: 316 DPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKG--YFIQPTVFTDVK 373

Query: 147 PEM 149
            +M
Sbjct: 374 DDM 376

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  117 bits (294), Expect = 2e-31
 Identities = 50/115 (43%), Positives = 79/115 (68%), Gaps = 1/115 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A++D A++GALASKFRN GQTC+ ANR  + +  YD F  K  + +  L +GDG 
Sbjct: 263 IVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGL 322

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDI 145
             GV +GPLI++  + KV   + DA++KGA+V+ GGK +  +G  +++PT++ D+
Sbjct: 323 EKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH-ELGGNFFQPTILVDV 376

Length = 482

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  115 bits (289), Expect = 9e-31
 Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 4/122 (3%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           +  +V   A+++ A++  ++  F N GQ CIS  R  +HE  YDEF+ +F    K LVVG
Sbjct: 235 AAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVG 294

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           D      +VGP+I++A+  ++   V++A++ GA++L GGK +  I     EPT++TD+ P
Sbjct: 295 DPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAI----LEPTVLTDVPP 350

Query: 148 EM 149
           +M
Sbjct: 351 DM 352

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  113 bits (284), Expect = 5e-30
 Identities = 54/126 (42%), Positives = 79/126 (62%), Gaps = 5/126 (3%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++DLA++GAL S F   GQ C + +R ++HE  YDEF+ +F E+ K L VGDG  
Sbjct: 253 VMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLD 312

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL----YYEPTLITDITP 147
              ++GPLIN+AQL KV    +   ++GA +LLGG+   T G      + EPT+ TD+TP
Sbjct: 313 EETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGER-LTGGGYEKGYFVEPTVFTDVTP 371

Query: 148 EMDCYR 153
           +M   +
Sbjct: 372 DMRIAQ 377

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  112 bits (283), Expect = 9e-30
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 3/124 (2%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++DLA++  L +     GQ C +  R ++HE  YDEF+ +  +  K + +GD   
Sbjct: 254 VMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLD 313

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGE--LYYEPTLITDITPEM 149
            G  VGPLIN+A + K    ++ A  +G  VL GGK     GE   Y EPT++T +T + 
Sbjct: 314 EGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKR-IDGGEPGNYVEPTIVTGVTDDA 372

Query: 150 DCYR 153
              +
Sbjct: 373 RIVQ 376

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  111 bits (279), Expect = 2e-29
 Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 3/122 (2%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++D      +   F++ GQ CI   R ++HEK YD+ +   +++++ L  G    
Sbjct: 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLD 300

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL---YYEPTLITDITPE 148
             V+VG +I+ A+  ++  +V DA++KGA++L GGK  P        Y+ PTL+ D+TP+
Sbjct: 301 GDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPD 360

Query: 149 MD 150
           M 
Sbjct: 361 MK 362

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  110 bits (278), Expect = 3e-29
 Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 5/122 (4%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V E A++D A   AL   F N GQ C+S  R ++HE   DEF+ K     + L  G    
Sbjct: 219 VLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP--- 275

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
             V +G L++ A   +V  +VDDA+ KGAK+++GG  + +       PT++ ++TP+MD 
Sbjct: 276 --VVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDI 333

Query: 152 YR 153
           Y 
Sbjct: 334 YS 335

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  110 bits (277), Expect = 4e-29
 Identities = 46/118 (38%), Positives = 76/118 (64%), Gaps = 4/118 (3%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V E A+ID A+  A+  KF + GQ C++ NR ++HE  YDEF+ KF E++K L  GD + 
Sbjct: 249 VLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSD 308

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               VGPLIN++Q+  +   ++ A+++GA +L+GG+    +     EPT+++D+T +M
Sbjct: 309 PDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNV----LEPTVLSDVTNDM 362

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  109 bits (275), Expect = 7e-29
 Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 4/122 (3%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   A++D A++ A    F + GQ C+SA+R ++ E  YDEF+ KF  +   L VGD   
Sbjct: 237 VLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRD 296

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
               +GPLI+  Q+ ++ R V+DA+ KGAK+L GGK +      +Y+PT++TD+TP+M  
Sbjct: 297 PDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYD----GNFYQPTVLTDVTPDMRI 352

Query: 152 YR 153
           +R
Sbjct: 353 FR 354

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  108 bits (271), Expect = 3e-28
 Identities = 45/124 (36%), Positives = 70/124 (56%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +VF  A++D A    +   + N G+ C S +R L+HE   D F++    + + + VGD 
Sbjct: 235 QIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDP 294

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                 VG +IN+AQL K+T  VD    +GA +LLGG+   +   L+Y+PT+ TD+TP+M
Sbjct: 295 LDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDM 354

Query: 150 DCYR 153
              R
Sbjct: 355 AIAR 358

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  107 bits (269), Expect = 5e-28
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           +F+ A+++ A+ GA+ + F + GQ C +  R  +     DEF  +  E+ K + +GD   
Sbjct: 233 IFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLD 292

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL----YYEPTLITDITP 147
               +G LI++  L KV   ++ A ++GAKVL GG+       L    Y  P ++TD T 
Sbjct: 293 EDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTD 352

Query: 148 EMDCYR 153
           +M   R
Sbjct: 353 DMTIVR 358

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  107 bits (269), Expect = 6e-28
 Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 4/123 (3%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V   A++D A Q  +   F   GQ+CIS  R L+H   YDEF S+   ++K L  GD  
Sbjct: 237 IVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPK 296

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
               +VGP+I++++  +V   V++A+  GAK+L GGK          EPT++ D+ P+M+
Sbjct: 297 DDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK----RDGALLEPTILEDVPPDME 352

Query: 151 CYR 153
              
Sbjct: 353 VNC 355

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  106 bits (266), Expect = 8e-28
 Identities = 44/121 (36%), Positives = 73/121 (60%), Gaps = 2/121 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V + A++DLA++  + S+  N GQ C  A R  + +  YD+F+++  E ++ +  G+ A
Sbjct: 188 IVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 247

Query: 91  V-SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
             + + +GPLIN A L +V + V  A+++GA+V LGGK     G  YY PTL+ D+  EM
Sbjct: 248 ERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKG-YYYPPTLLLDVRQEM 306

Query: 150 D 150
            
Sbjct: 307 S 307

Length = 409

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  106 bits (266), Expect = 2e-27
 Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 3/124 (2%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  +VF  A+++ A+   + +  +N GQTC + +R L+H   YDE + +  E+ + L VG
Sbjct: 231 SPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG 290

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK--PNPTIGELYYEPTLITDI 145
            G +   ++GPLI+  QL +V   V  A  +GA+++ GG+       G  +  PTL+ D+
Sbjct: 291 PG-LEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDV 349

Query: 146 TPEM 149
            P+ 
Sbjct: 350 PPDS 353

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  105 bits (263), Expect = 4e-27
 Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V + A+++ A+  A+  +F N GQ C +  R L+ E+ YD+F+    EK+K L VGD 
Sbjct: 239 MIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDP 298

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                ++GPLI+   + ++  +V+DA++KG K+L GGK        ++ PT++ + TP+M
Sbjct: 299 LDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGK---RDEGSFFPPTVLENDTPDM 355

Query: 150 DCYR 153
              +
Sbjct: 356 IVMK 359

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  104 bits (261), Expect = 8e-27
 Identities = 38/124 (30%), Positives = 71/124 (57%), Gaps = 1/124 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A+++ A++ A+   F N GQ C + +R L+HE   D F+ + +   + + VGD  
Sbjct: 237 IVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPL 296

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDITPEM 149
             GV +GPL+++AQ  KV   +    ++GA++L GG+    + + Y+  PT+  D+  + 
Sbjct: 297 EEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDS 356

Query: 150 DCYR 153
             +R
Sbjct: 357 RIWR 360

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  102 bits (256), Expect = 3e-26
 Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 1/122 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N+VF  A++D A++ A    F N GQ C + +R L+HE  YDEF+ +F+   + L  G
Sbjct: 231 SANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPG 290

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           D       +GPL+++AQ  +V   VD   ++GA++L GGK  P     + EPT+   + P
Sbjct: 291 DPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGK-RPGARGFFVEPTIFAAVPP 349

Query: 148 EM 149
           EM
Sbjct: 350 EM 351

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  101 bits (253), Expect = 1e-25
 Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 1/122 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N+VF  A++D A++ A  + F N GQ C + +R  + E  YDEF+ +  E+ K  VVG
Sbjct: 260 SPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVG 319

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +        GP I++ Q  K+  +++   K+GAK+  GGK +   G  + +PT+ +D+T 
Sbjct: 320 NPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKG-YFIQPTVFSDVTD 378

Query: 148 EM 149
           +M
Sbjct: 379 DM 380

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  101 bits (253), Expect = 1e-25
 Identities = 42/121 (34%), Positives = 71/121 (58%), Gaps = 5/121 (4%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++DLA++ A+   F + GQ C +++R ++ E  +D F+    E+ K L VGD   
Sbjct: 253 VLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALD 312

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKP--NPTIGELYY-EPTLITDITPE 148
            GV++GP++++ QL K  R ++ A  +GAK++ GG+    P  G  YY  P L   +T +
Sbjct: 313 EGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEG--YYLAPALFAGVTND 370

Query: 149 M 149
           M
Sbjct: 371 M 371

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  100 bits (252), Expect = 2e-25
 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 1/123 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N+V + A++  A   A+     N GQ C    R L+   RYDE +   +   + L VG
Sbjct: 237 SANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVG 296

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK-PNPTIGELYYEPTLITDIT 146
           D A  G  +GPLI+ AQ  +V   +     +GA+++ GG  P       Y EPTL  D+ 
Sbjct: 297 DPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVD 356

Query: 147 PEM 149
            +M
Sbjct: 357 NDM 359

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score = 99.7 bits (249), Expect = 4e-25
 Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 5/124 (4%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
           N+VF  A+ + A+  AL   F N GQ C + +R L+ E  +D+F++  +E+ K + +G+G
Sbjct: 250 NIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNG 309

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL----YYEPTLITDI 145
             +   +GPL++     KV   +    ++GA+++ GGK  PT  EL    + EPT+  D+
Sbjct: 310 LDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGK-RPTGDELAKGYFVEPTIFDDV 368

Query: 146 TPEM 149
              M
Sbjct: 369 DRTM 372

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score = 99.6 bits (249), Expect = 4e-25
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 2/128 (1%)

Query: 28  SLNMVFESA-NIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVV 86
           S N+VF  A ++D A + A A  F N G+ C + +R L+HE   DEF+ K     +    
Sbjct: 239 SPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKP 298

Query: 87  GDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKP-NPTIGELYYEPTLITDI 145
           GD       +G L+++A   KV   ++    +GA+++ GGK      G  + EPT+   +
Sbjct: 299 GDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGV 358

Query: 146 TPEMDCYR 153
           TP+M   R
Sbjct: 359 TPDMRIAR 366

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 97.7 bits (244), Expect = 2e-24
 Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           VF+ A++D  ++G     + N GQ C +A R       YD+ ++K +  +  L VGD   
Sbjct: 255 VFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDD 314

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKG-AKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
               +GPLI+ A   +V   V+ A   G  +V+ GG+     G  YYEPTL+     + +
Sbjct: 315 EDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKG-YYYEPTLLAGARQDDE 373

Query: 151 CYR 153
             +
Sbjct: 374 IVQ 376

Length = 475

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   A+++      + + F   GQ C++ +  +      DE+I K  E+ K L VG G  
Sbjct: 253 VMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDD 312

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYE------PTLITDI 145
            G ++GP+I+ A   ++  +++  +++GAK++L G+     G   YE      PT++ ++
Sbjct: 313 PGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPG---YENGNFVGPTILDNV 369

Query: 146 TPEMDCYR 153
           TP+M  Y+
Sbjct: 370 TPDMKIYK 377

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score = 97.2 bits (243), Expect = 3e-24
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 2/124 (1%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++ + A+++ A+   +A+ F N GQ+C +  R L+   RY E     +   +  VVG
Sbjct: 244 SANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVG 303

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL-YY-EPTLITDI 145
           D       +GPL + AQ  +V   +   I++GA+++ GG   P   E  Y+ +PT+  D+
Sbjct: 304 DPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADV 363

Query: 146 TPEM 149
           TP+M
Sbjct: 364 TPDM 367

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 96.2 bits (240), Expect = 6e-24
 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           VF+ A++D A+ G   + + N GQ C +A R  +HE  YDEF++   E +  + VGD   
Sbjct: 235 VFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDD 294

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDI 145
               +GPL + AQ  +V   V+ A    A+VL GG+     G  +YEPT++  +
Sbjct: 295 EDTEMGPLNSAAQRERVAGFVERA-PAHARVLTGGRRAEGPG-YFYEPTVVAGV 346

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score = 96.0 bits (239), Expect = 7e-24
 Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 6/122 (4%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V   A++D AI+      F + GQ CIS  R  +HE+ YDEFI  F   +K L VGD 
Sbjct: 237 VIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDP 296

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                +VGPLI++    +V R V++A++ GA++L GG+ +   G L+  PT++ D     
Sbjct: 297 LDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERD---GALFK-PTVLED--VPR 350

Query: 150 DC 151
           D 
Sbjct: 351 DT 352

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 95.9 bits (239), Expect = 9e-24
 Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 2/123 (1%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +VF+ A++D A+     +     GQ C++ +R L+     DE   + + ++  + VG G
Sbjct: 234 CIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPG 293

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLL-GGKPNPTIGE-LYYEPTLITDITP 147
                ++GPLI++A + +V R+V+ AI  GA+V+L GG     + +  +  PTL+    P
Sbjct: 294 LDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDP 353

Query: 148 EMD 150
           + D
Sbjct: 354 DAD 356

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score = 93.0 bits (231), Expect = 1e-22
 Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 1/119 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F+ A++D+A+  AL   F N G+ C++++R  + E  YDEF+ K  EK K  VVGD  
Sbjct: 276 LIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPF 335

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                 GP ++K Q  K+   ++   ++GA +L GGKP    G  Y EPT+ TD+T +M
Sbjct: 336 DPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKG-YYIEPTIFTDVTEDM 393

Length = 501

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 92.7 bits (231), Expect = 1e-22
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 2/121 (1%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   A++D A +  +   F N GQ+C S  R  +HE  YD F+  F   +K   +GD   
Sbjct: 233 VRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLD 292

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK--PNPTIGELYYEPTLITDITPEM 149
               +GP+++      V   + DAI KGA+ L+ G   P    G  Y  PT++T++   M
Sbjct: 293 PSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSM 352

Query: 150 D 150
            
Sbjct: 353 R 353

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 92.4 bits (230), Expect = 1e-22
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 7/127 (5%)

Query: 28  SLNMVFESANIDLAIQGALAS-KFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVV 86
           S  +VF  A++D A+ GA+A  +F   GQ+C + +R  +HE  YD F+ K   K+  L +
Sbjct: 230 SPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKI 289

Query: 87  GDGAVSGVNVGPLINKAQLTKVTRIVDDAIK-KGAKVLLGGKPNPTIGEL----YYEPTL 141
           GD      ++G +I++ Q  KV   +D  +   GA VL GG   P  G L    + +PT+
Sbjct: 290 GDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPL-PGEGPLADGFFVQPTI 348

Query: 142 ITDITPE 148
            + +  E
Sbjct: 349 FSGVDNE 355

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score = 92.6 bits (230), Expect = 2e-22
 Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  +VF+ A+++ A+ GA+   F + GQ C +  R  +H+K  + F+++  E+ + + +G
Sbjct: 247 SPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTERIKLG 306

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK--PNPTIGE-LYYEPTLITD 144
           D       +GPLI+ A   KV   ++    +GA +  GG    N  +    + EPT+  D
Sbjct: 307 DPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPTVFAD 366

Query: 145 ITPEM 149
            T +M
Sbjct: 367 CTDDM 371

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 10/142 (7%)

Query: 15  KTQPRPKVMPREASLNM-------VFESANIDLAIQGALASKFRNCGQTCISANRFLIHE 67
           K QP  K   +     M       V E A++D A +G + S F   GQ C + +R ++HE
Sbjct: 267 KVQPGQK-WLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHE 325

Query: 68  KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK 127
             YDEF+ +  E+ K L VGD     V +GP+I+K    ++ R ++   K   ++LLGG+
Sbjct: 326 SVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIG-KSEGRLLLGGE 384

Query: 128 PNPTIGELYY-EPTLITDITPE 148
                 E Y+ +PT+  D+ P+
Sbjct: 385 VLELAAEGYFVQPTIFADVPPD 406

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 92.1 bits (229), Expect = 2e-22
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 4/127 (3%)

Query: 31  MVFESANIDLAIQGALAS-KFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
           +VF  A+ + A   A+A   F  CGQ+C S +R  +HE  YDE +++  E++  + VGD 
Sbjct: 232 IVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDP 291

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTI---GELYYEPTLITDIT 146
                 +GPL+++ Q  +V   +D A ++GA+++ GG         G  Y EPT+  D+T
Sbjct: 292 TDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVT 351

Query: 147 PEMDCYR 153
           P M   R
Sbjct: 352 PGMRIAR 358

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score = 91.7 bits (228), Expect = 3e-22
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 4/119 (3%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A+++ A   A+A  + N GQ C +  R L+HE   DEF+    EK   LVVGD   
Sbjct: 236 VMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMD 295

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
              ++G +I++    ++   V++AI +GA+VLLG +     G LY  PT++  + P+ +
Sbjct: 296 PATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQ---GALYA-PTVLDHVPPDAE 350

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score = 91.4 bits (227), Expect = 4e-22
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N+VF+ A+++ A+       F N GQ C + +R  + E  YD+F+ +F EK K L VG
Sbjct: 259 SPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVG 318

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           D        GP +++ Q  ++   ++    +GA V  GGK +   G  + EPT+ TD+T 
Sbjct: 319 DPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEG-YFIEPTIFTDVTE 377

Query: 148 EM 149
           +M
Sbjct: 378 DM 379

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score = 91.0 bits (226), Expect = 4e-22
 Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 3/125 (2%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++F+ AN D A++GA      N GQ C + +R  + E  YDEF++K  EK + + VG
Sbjct: 249 SANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVG 308

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK---PNPTIGELYYEPTLITD 144
           +       +G  +NK QL K+   VD A ++GAK+L GG     N      + EPTLI +
Sbjct: 309 NPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVN 368

Query: 145 ITPEM 149
           +T +M
Sbjct: 369 VTNDM 373

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 90.9 bits (226), Expect = 5e-22
 Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V  SA++D  I   +   F + GQ C+S  R  +  +  D+F  + +   + LVVGD  
Sbjct: 239 IVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPT 298

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
                VGPLI   ++ +V   V++A+  GA++L GGK    + +  Y PT++ D  P  D
Sbjct: 299 DPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKR---LSDTTYAPTVLLD--PPRD 353

Query: 151 C 151
            
Sbjct: 354 A 354

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score = 90.5 bits (225), Expect = 7e-22
 Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  +VF+ A++D A++G + + + N GQ C + +R L+ E   +E I K  E++  L VG
Sbjct: 260 SPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVG 319

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           D     +++G +++ AQL ++  +V++   +GA V   G   P+ G  +Y PTL T++ P
Sbjct: 320 DPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKG-PFYPPTLFTNVPP 378

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 90.3 bits (225), Expect = 8e-22
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++D A+ G + +   N GQ C++  R L+   RYDE +   +  +  L VGD   
Sbjct: 254 VLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLD 313

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDITPEM 149
               +GPL +  Q  +V   +     +GA+++ GG     +   ++ EPTL  D+  +M
Sbjct: 314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDM 372

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score = 90.5 bits (225), Expect = 9e-22
 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 3/126 (2%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIK-LLVVGDG 89
           +VFE A++D A++ A A    N GQ C + +R  + E  YD+F+ KF E +K    VG  
Sbjct: 261 LVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSP 320

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGE--LYYEPTLITDITP 147
                 VGP ++K Q  +V   ++   K+GAK++ GG+  P       +  PT+ TD+  
Sbjct: 321 FDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQ 380

Query: 148 EMDCYR 153
           +M   +
Sbjct: 381 DMRIVK 386

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score = 90.2 bits (224), Expect = 1e-21
 Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A++D A++ A  + F N GQ C + +R  +HE  YDEF+ K   +    VVGD  
Sbjct: 259 IVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPF 318

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             GV  GP ++K Q  K+   ++   ++GA ++ GG    + G  Y +PT+ +D+  +M 
Sbjct: 319 RKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKG-YYIQPTIFSDVKDDMK 377

Query: 151 CYR 153
             R
Sbjct: 378 IAR 380

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score = 89.2 bits (222), Expect = 2e-21
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKI-KLLVVGDGA 90
           V E+A++  A +     KF N GQTCI+ +   +HE   D F+     +I K        
Sbjct: 215 VDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAAR 274

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
            +  ++  ++N     ++  ++DDA+ KGAKV  GG+ +    + Y  PT++T++TP+M 
Sbjct: 275 KASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAA--QRYIAPTVLTNVTPDMK 332

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score = 88.7 bits (220), Expect = 4e-21
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
             + A+ID  ++G L + F + GQ C +  RF +H  ++DE ++K  + +    VG    
Sbjct: 259 FLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMD 318

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLI 142
             V  GPL N+    KV   +DDA  +G +++ GG+     GE Y+ +PTL+
Sbjct: 319 ESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALA--GEGYFVQPTLV 368

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score = 88.3 bits (219), Expect = 5e-21
 Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 8/139 (5%)

Query: 23  MPREASLNM-------VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS 75
           M +  SL +       VF+  ++D A++ A+   F   GQ C + +R L+HE+   EF+ 
Sbjct: 253 MVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLE 312

Query: 76  KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL 135
           K  +  K + + D    G  +GP++++ Q  KV + +  A  +GA +L GGK    + + 
Sbjct: 313 KLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKG 372

Query: 136 YY-EPTLITDITPEMDCYR 153
           ++ EPT+ITD+T  M  +R
Sbjct: 373 FFIEPTIITDVTTSMQIWR 391

Length = 503

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 87.6 bits (218), Expect = 8e-21
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 3/121 (2%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           VF+ A++D A   A+ + F + GQ C +  R  + +     F ++  E+++ + +GD   
Sbjct: 259 VFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMD 318

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK---PNPTIGELYYEPTLITDITPE 148
              N GPL++ A   KV   ++    +GA++L GG+           +  PT+ TD T +
Sbjct: 319 PATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDD 378

Query: 149 M 149
           M
Sbjct: 379 M 379

Length = 488

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score = 87.2 bits (216), Expect = 1e-20
 Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 6/125 (4%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A+++ A+   +   F   G+ C +++R L+ E   ++F+ K  E+++ + VG   
Sbjct: 252 IVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPL 311

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL------YYEPTLITD 144
                VGPLI+   L KV   V+ A K+GA +L+GG+  PT          Y  PT+ T 
Sbjct: 312 DPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTG 371

Query: 145 ITPEM 149
               M
Sbjct: 372 ADNHM 376

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score = 86.4 bits (214), Expect = 2e-20
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 1/119 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F   ++D A++  ++S F N G+ CI+A R  + E  +DEF+ +  E++K + +GD  
Sbjct: 265 IIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPL 324

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               + GP  +KA L K+    +  +K+GA ++ GGK     G  ++EPT+ TD+   M
Sbjct: 325 DRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPG-FFFEPTVFTDVEDHM 382

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 85.3 bits (212), Expect = 5e-20
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   A+++LA +  +       GQ C +  R L+HE   DE +    E++  L VG    
Sbjct: 257 VLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWD 316

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
           +GV++ PLI+      V  ++DDA+ KGA VL GG      G     PTL+  +TP+M  
Sbjct: 317 NGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGG---REGGNLIYPTLLDPVTPDMRL 373

Query: 152 YR 153
             
Sbjct: 374 AW 375

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score = 83.8 bits (207), Expect = 2e-19
 Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 2/117 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A+I+LA Q A  S F   GQ C + +R ++HEK YDE + +F E  + L VG   
Sbjct: 290 IVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPPD 349

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
            + V VGP+I++    K+   ++    +G +++ GG  + + G  +  PT+  D+  
Sbjct: 350 SADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKG-YFIGPTIFADVDR 404

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 83.0 bits (206), Expect = 4e-19
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 1/112 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V E A++DLA++  L +     GQ C +  R ++HE  YDE + +  +  K + +GD   
Sbjct: 253 VMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLD 312

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLIT 143
            G  VGPL  KA +      +++A  +G  VL GGK        Y EPT++ 
Sbjct: 313 DGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGK-VIDGPGNYVEPTIVE 363

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 82.7 bits (205), Expect = 4e-19
 Identities = 40/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V E A++DLA +  +AS F   GQ C + +R ++HE  YDE + K  E  K L VG+   
Sbjct: 295 VDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGNPE- 353

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDITPE 148
               +GP+IN+A   K+   ++   K+  +++LGG+ + + G  Y+ +PT+  D+ P+
Sbjct: 354 DNAYMGPVINQASFDKIMSYIEIG-KEEGRLVLGGEGDDSKG--YFIQPTIFADVDPK 408

Length = 514

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 80.3 bits (198), Expect = 3e-18
 Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V   A+++LA++ A+A +++N GQ C +A RF+I E     F  +F      L +GD  
Sbjct: 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPR 301

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
                +GP+       ++   V+  + +GA++LLGG+     G  YY PT++ ++TPEM 
Sbjct: 302 DEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGN-YYAPTVLANVTPEMT 360

Query: 151 CYR 153
            +R
Sbjct: 361 AFR 363

Length = 462

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 79.9 bits (197), Expect = 5e-18
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 1/119 (0%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A++D A++ A  + F N GQ C + +R  +HE+ YDEF+ K   +    VVGD  
Sbjct: 313 IVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPF 372

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
             GV  GP I+  Q  K+ R +   ++ GA +  GG    + G  Y +PT+ +++  +M
Sbjct: 373 KKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKG-YYIQPTVFSNVQDDM 430

Length = 538

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score = 78.5 bits (194), Expect = 1e-17
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 8/130 (6%)

Query: 28  SLNMVFESA-----NIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIK 82
           S N+ F+ A     + D   +        N G+ C   +R L+ E  YDEFI +  E+ +
Sbjct: 249 SPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFE 308

Query: 83  LLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL---YYEP 139
            + VG+       +G  ++K QL K+   VD   ++GA+VL GG+     G     +YEP
Sbjct: 309 AIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEP 368

Query: 140 TLITDITPEM 149
           TLI     +M
Sbjct: 369 TLIKGGNNDM 378

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 74.5 bits (184), Expect = 3e-16
 Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + AN+++A +     KF N GQTCI+ +  L+HE   DE I +  + IK     D   
Sbjct: 215 VDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKE 274

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
           S  + G +IN+    ++  ++DD      KV++GG+ +    E Y  PT++ D++P+   
Sbjct: 275 SP-DYGRIINERHFDRLASLLDD-----GKVVIGGQVDK--EERYIAPTILDDVSPDSPL 326

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 74.0 bits (182), Expect = 5e-16
 Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 4/127 (3%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF   + D A+ G L S F N GQ C+   R  +    +D F++    + + L +G   
Sbjct: 257 IVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPD 316

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK----PNPTIGELYYEPTLITDIT 146
               N+GPLI+     KV      A+++GA V+ GG      +   G  + +PT+ T + 
Sbjct: 317 DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLP 376

Query: 147 PEMDCYR 153
                  
Sbjct: 377 DSARVVT 383

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score = 73.3 bits (181), Expect = 8e-16
 Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 8/118 (6%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V E AN+ LA +  +  KF N GQTC++ +  L+HE   ++FI +  E+IK    G+  +
Sbjct: 215 VDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKF-YGEDPL 273

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              + G +IN+    ++  ++D+      K++ GG  +     LY EPT++ ++T + 
Sbjct: 274 ESPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNTDR--ETLYIEPTILDNVTWDD 324

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 68.7 bits (168), Expect = 3e-14
 Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 4/123 (3%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A++D A   A+   ++N GQ C +  R L+ E   D F     EK +    GD  
Sbjct: 254 IVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPM 313

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
              V++G +I++A        V++AI +GA++LLG   +   G L Y PT++  + P M 
Sbjct: 314 DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRD---GAL-YAPTVLDRVDPSMT 369

Query: 151 CYR 153
             R
Sbjct: 370 LVR 372

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score = 68.4 bits (168), Expect = 4e-14
 Identities = 23/50 (46%), Positives = 33/50 (66%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKF 77
           S  +V E A++D A++GA+   F N GQ C +A+R L+HE  YDEF+ K 
Sbjct: 206 SPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKL 255

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 67.7 bits (165), Expect = 6e-14
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 2/115 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A+ID  ++G     F N GQ C +A R       YD  + K    +  L  G   
Sbjct: 253 IVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPD 312

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKG-AKVLLGGKPNPTIGELYYEPTLITD 144
                +GPL + A L +V + V++A   G  KV+ GG+     G  Y+ PTL+  
Sbjct: 313 DESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNG-YYFAPTLLAG 366

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score = 67.5 bits (166), Expect = 9e-14
 Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 3/120 (2%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           +   A++  A +     K  N GQTC++ +  L+ E + +EF++     +  +     A 
Sbjct: 216 IAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKM-YPTLA- 273

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVL-LGGKPNPTIGELYYEPTLITDITPEMD 150
              +   +IN+    ++  +++DA  KGA+V+ L              PTL+ ++T +M 
Sbjct: 274 DNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMR 333

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score = 64.9 bits (159), Expect = 7e-13
 Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 6/117 (5%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V ++A+++LA +  L  KF N GQ C++ +  L+    YDEF+ +  + +       GA 
Sbjct: 223 VTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEF-YPGGAN 281

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPE 148
           +  +   ++N     ++  ++D    KG KV++GG+ +      +  PT+++D++ +
Sbjct: 282 ASPDYTRIVNPRHFNRLKSLLDTT--KG-KVVIGGEMDE--ATRFIPPTIVSDVSWD 333

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score = 64.4 bits (156), Expect = 1e-12
 Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 10/129 (7%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANR--FLIHEKRYDEFISKFSEKIKLLVVGD 88
           +V   ANID  +   LA+ F   GQ C++ +   F+   K +++   K  E+ K L V  
Sbjct: 365 LVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWED---KLVERAKALKVTC 421

Query: 89  GAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK----PNPTIGELYYEPTLITD 144
           G+    ++GP+I+K    ++ R++   +  GAK+LL G+    P    G  +  PT+++ 
Sbjct: 422 GSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGN-FIGPTILSG 480

Query: 145 ITPEMDCYR 153
           +TP+M+CY+
Sbjct: 481 VTPDMECYK 489

Length = 604

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 63.7 bits (155), Expect = 2e-12
 Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V   A+ D A    + + +   GQ C+ A    +     DE++ +  E+ + + +G G 
Sbjct: 252 VVMPDADKDAAADALVGAAYGAAGQRCM-AISAAVLVGAADEWVPEIRERAEKIRIGPGD 310

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYE------PTLITD 144
             G  +GPLI      +V  ++     +GA+VLL G+     G   YE      PTL+  
Sbjct: 311 DPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDG---YEEGNWVGPTLLER 367

Query: 145 ITPEMDCYR 153
           + P M  Y+
Sbjct: 368 VPPTMKAYQ 376

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 63.4 bits (154), Expect = 3e-12
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 4/127 (3%)

Query: 28  SLNMVF-ESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVV 86
           S N+VF +  ++  A     A  F N GQ CI+  R L+ E   DEF++   ++ +    
Sbjct: 272 SANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQP 331

Query: 87  GDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDIT 146
           G        +G LI+ A    V   + +   KG ++LL G+           PT+  D+ 
Sbjct: 332 GHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAA--AIGPTIFVDVD 388

Query: 147 PEMDCYR 153
           P     R
Sbjct: 389 PNASLSR 395

Length = 494

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 6/117 (5%)

Query: 35  SANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGV 94
           S N+ +A +     KF N GQTC++ +  L+H    D+FI    E IK     D   S  
Sbjct: 227 SCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSE- 285

Query: 95  NVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
           +   ++N+    ++  ++ D    G KV+ GG+ +  I   Y  PT+I +   +   
Sbjct: 286 DYSRIVNEFHTKRLAELIKD---HGGKVVYGGEVD--IENKYVAPTIIVNPDLDSPL 337

Length = 493

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 10/124 (8%)

Query: 28  SLNMVFES------ANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKI 81
           S N+ F        A  D A++G +     N G+ C   +R LI E  YD F+ +  E++
Sbjct: 249 SPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIYDRFMERALERV 307

Query: 82  KLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL---YYE 138
           K +  G+   +   +G   +  QL K+   +D   ++GA+VL GG+ N   G L   YY 
Sbjct: 308 KAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYV 367

Query: 139 PTLI 142
           PT  
Sbjct: 368 PTTF 371

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score = 59.9 bits (145), Expect = 4e-11
 Identities = 32/118 (27%), Positives = 66/118 (55%), Gaps = 2/118 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E+A+ +L ++G + S F   GQ C +A+R ++ +  Y+  + +  ++ + L VG   
Sbjct: 277 IVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPE 336

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPE 148
            +G ++GP+I+  Q  KV   + +  K   +++LGGK     G  +  PT++ ++ P+
Sbjct: 337 ENGTDLGPVIDAEQEAKVLSYI-EHGKNEGQLVLGGKRLEGEGY-FVAPTVVEEVPPK 392

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 59.8 bits (145), Expect = 4e-11
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 2/123 (1%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V + A+I LA++  L +     GQ C +  R L+HE  YD+ + +     K + +GD  
Sbjct: 274 IVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPL 333

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             G  +GPL          + ++    +G K+L GG    + G  + +PT I +I+P+ D
Sbjct: 334 EKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGN-FVQPT-IVEISPDAD 391

Query: 151 CYR 153
             +
Sbjct: 392 VVK 394

Length = 508

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 6/115 (5%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V  SA++D  +   +   F   GQ C +A+R  + E  + E   +  E++K + +GD  
Sbjct: 292 LVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPD 351

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKK--GAKVLLGGKPNPTIGELYY-EPTLI 142
                +G +I++    ++   +D A K    A+++ GGK + ++G  Y+ EPT+I
Sbjct: 352 DFSNFMGAVIDEKAFDRIKGYIDHA-KSDPEAEIIAGGKCDDSVG--YFVEPTVI 403

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 14/120 (11%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVV---GD 88
           V +S +ID+A +     KF N GQTCI+ +  L   +  ++F+    E +K  +    G+
Sbjct: 215 VDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFV----EALKKTLKEFYGE 270

Query: 89  GAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPE 148
                 + G +IN     ++       +  G KV +GG+ +    E Y  PT++TD+ P 
Sbjct: 271 DPKESPDYGRIINDRHFQRLK-----KLLSGGKVAIGGQTDE--KERYIAPTVLTDVKPS 323

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 15/134 (11%)

Query: 27  ASLNMVF-----ESANI-----DLAIQGALASKFRNC---GQTCISANRFLIHEKRYDEF 73
           A+L  VF     +SA I     DLA   ++A+ F  C   GQ C    R ++   RYDE 
Sbjct: 243 ATLKKVFLELGGKSAFIVLDDADLAAACSMAA-FTVCMHAGQGCAITTRLVVPRARYDEA 301

Query: 74  ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGG-KPNPTI 132
           ++  +  +  +  GD A  G   GP+I+  Q  +V   +D A+ +G +   GG +P    
Sbjct: 302 VAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRD 361

Query: 133 GELYYEPTLITDIT 146
              + EPT+I  + 
Sbjct: 362 RGFFVEPTVIAGLD 375

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 51.4 bits (124), Expect = 3e-08
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 35  SANIDLAIQGALASKFRNCGQTCISANRFLIHEKR-YDEFISKFSEKIKLLVVGDGAVSG 93
           +A  + A++  + S F + GQ C SA R L  ++   + FI      +  L VGD     
Sbjct: 291 TALPEQAVKDVVQSAFGSAGQRC-SALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLS 349

Query: 94  VNVGPLINKA 103
            +VGPLI+K 
Sbjct: 350 TDVGPLIDKP 359

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 51.4 bits (123), Expect = 4e-08
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 54  GQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVD 113
           GQ C +  R ++ +   +  +     ++  +V+GD    GV++GPL++  Q   V   V 
Sbjct: 289 GQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVA 348

Query: 114 DAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             +  GA+V LGG P    G  ++ PTL+    P   
Sbjct: 349 ALLAAGAEVRLGG-PGRLDGA-FFPPTLLLAEDPWAG 383

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 50.7 bits (122), Expect = 5e-08
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 1/94 (1%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY-DEFISKFSEKIKLLVVGDGA 90
           V++ A+ID A    + S F   GQ C  A R ++ +    D F+ +  E  K L +G   
Sbjct: 215 VWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPD 274

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLL 124
                +GPLI  A   +      D +  G + LL
Sbjct: 275 AEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLL 308

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 7/94 (7%)

Query: 54  GQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVD 113
           GQ C +  R  + E R D  I     ++  +VVGD  + GV +GPL+++ Q   V   V 
Sbjct: 289 GQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAV- 347

Query: 114 DAIKKGAKVLLGGKPNPTIGEL------YYEPTL 141
             +   A+V+ GG     +         ++ PTL
Sbjct: 348 ATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTL 381

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)

Query: 54  GQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVD 113
           GQ C +  R  + E  YD      + ++    VG+    GV +GPL+++AQL  V R   
Sbjct: 293 GQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAV-RAGL 351

Query: 114 DAIKKGAKVLLGGKPNPTIG 133
            A++  A+VL  G     + 
Sbjct: 352 AALRAQAEVLFDGGGFALVD 371

Length = 521

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 11/122 (9%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG--- 87
           +V E A++DLA    +   F   GQ C +    L+ E   D  + K + K+  L VG   
Sbjct: 272 IVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPE 331

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           D      ++ P+++++    +  +V DA +KGA      K     G L + P L+ ++ P
Sbjct: 332 DDC----DITPVVSESSANFIEGLVMDAKEKGATFCQEWKRE---GNLIW-PLLLDNVRP 383

Query: 148 EM 149
           +M
Sbjct: 384 DM 385

Length = 496

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 3/114 (2%)

Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V  SA+++  + G +   F   GQ C + +R  +    +  F  +   ++  + VGD  
Sbjct: 291 VVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKGRLLAELSRVKVGDPD 350

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGA--KVLLGGKPNPTIGELYYEPTLI 142
             G  +G +I++    K+ + ++ A    +   +L GGK + ++G  + EPT++
Sbjct: 351 DFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVG-YFVEPTVV 403

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)

Query: 53  CGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIV 112
            GQ C +  R ++     D  I     ++  +VVGD  + GV +G L +  Q   V   V
Sbjct: 292 AGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKV 351

Query: 113 DDAIKKGAKVLLGGKPNPT 131
             A+   A+++ GG  +  
Sbjct: 352 -AALLAAAEIVFGGPDSFE 369

Length = 675

>gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 14/96 (14%)

Query: 54  GQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLI---NKAQLTKVTR 110
           GQ C + +    HE       +   +K+K L      +  + +GP++    +  L  V +
Sbjct: 279 GQKCSAQSILFAHENWVQ---AGILDKLKALA-EQRKLEDLTIGPVLTWTTERILDHVDK 334

Query: 111 IVDDAIKKGAKVLLGGKP--NPTIGELY--YEPTLI 142
           ++  AI  GAKVL GGKP  N +I  +Y  YEPT +
Sbjct: 335 LL--AIP-GAKVLFGGKPLTNHSIPSIYGAYEPTAV 367

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 39.0 bits (92), Expect = 6e-04
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 11/84 (13%)

Query: 45  ALASKFRNCGQTCISANRFL-IHEKRYDEFISKFSEKIK----LLVVGDGAVSGVNVGPL 99
            + S FR+ GQ C SA R L + E   D  I    E +K     L VGD  +   +VGP+
Sbjct: 818 VVTSAFRSAGQRC-SALRVLFVQEDIADRVI----EMLKGAMAELKVGDPRLLSTDVGPV 872

Query: 100 INKAQLTKVTRIVDDAIKKGAKVL 123
           I+      +   + + +K+ A++L
Sbjct: 873 IDAEAKANLDAHI-ERMKREARLL 895

Length = 1038

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
KOG2451|consensus	503		100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
KOG2450|consensus	501		100.0
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
KOG2456|consensus	477		100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
KOG2454|consensus	583		100.0
KOG2452|consensus	881		100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	99.98
KOG2453|consensus	507		99.98
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	99.98
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	99.97
KOG2455|consensus	561		99.97
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	99.96
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	99.95
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	99.94
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	99.94
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	99.92
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	99.91
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	99.9
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	99.89
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	99.84
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	99.59
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	97.87
KOG2449|consensus	157		97.86
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	97.12
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	96.22
KOG4165|consensus	433		91.45
PF12340	229	DUF3638: Protein of unknown function (DUF3638); In	84.87

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=5.3e-45  Score=305.74  Aligned_cols=166  Identities=33%  Similarity=0.593  Sum_probs=156.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       +++++|++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||+++||+|
T Consensus       226 v~~v~FTGS~~~G~~i~~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f  305 (482)
T PRK11241        226 VRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRF  305 (482)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHH
Confidence            5789999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|+++++++||++++.+++++.++|++|+++|+++++||..++. +|+|++|||+.+++++|++++
T Consensus       306 ~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~-~g~f~~Ptvl~~v~~~~~i~~  384 (482)
T PRK11241        306 AEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHEL-GGNFFQPTILVDVPANAKVAK  384 (482)
T ss_pred             HHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCC-CCeEEeeEEEECCCCCChhhh
Confidence            9999999999999999999999999999999999999999999999999999976432 589999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       385 eE~FGPVl~v~~~~~~~eai~  405 (482)
T PRK11241        385 EETFGPLAPLFRFKDEADVIA  405 (482)
T ss_pred             CcCcCCEEEEEEeCCHHHHHH
Confidence            9       3777788888774

>KOG2451|consensus

Probab=100.00  E-value=7.3e-45  Score=287.34  Aligned_cols=165  Identities=39%  Similarity=0.637  Sum_probs=155.5

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      ||+|+||||+.+|       +.+.|++.|||||+.|+||++|+|+|.|++..+..+|.|+||+|.+++|+|||+++||+|
T Consensus       242 VrkisFTGST~VGKiL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~F  321 (503)
T KOG2451|consen  242 VRKISFTGSTNVGKILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKF  321 (503)
T ss_pred             eeeEEeeccchHHHHHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHH
Confidence            6999999999999       689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCc-cCCCCCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK-PNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~-~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +.+|.++++++++||.+++.+..||+||+.+.++++.++++|+++|+++++||+ +.+. +.+|++|||+.+++++|-+.
T Consensus       322 v~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~l-g~~fyePTvl~~V~~~m~~s  400 (503)
T KOG2451|consen  322 VSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSEL-GPTFYEPTVLSNVTQNMLVS  400 (503)
T ss_pred             HHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEcccc-CCccccceEeecCCccceee
Confidence            999999999999999999999999999999999999999999999999999999 4443 56999999999999999999


Q ss_pred             ee-------eeeEecCccccc
Q psy7043         153 RF-------PCRLVDTIPTYI  166 (167)
Q Consensus       153 ~e-------pv~~v~~~~~ai  166 (167)
                      +|       ||+..++.+|+|
T Consensus       401 ~eEtFGPla~v~kFdteeEvi  421 (503)
T KOG2451|consen  401 SEETFGPLASVFKFDTEEEVI  421 (503)
T ss_pred             ccccccccceeeeeCCHHHHH
Confidence            99       366666666665

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=2.6e-44  Score=300.24  Aligned_cols=163  Identities=31%  Similarity=0.533  Sum_probs=153.4

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       ++++||++||||||||+||++|||++.|++.+++++|.|+||+|++++|+|||+++||+|
T Consensus       213 v~~i~FTGSt~~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f  292 (472)
T COG1012         213 VDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEF  292 (472)
T ss_pred             CCEEEEECChHHHHHHHHHHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHH
Confidence            6899999999999       589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHh-hccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKL-LVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~-~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++ ++ +++|++.++.+++||++++.+++++.++|++++.+|+.++.||...   .|+|++|||+.+++++|+++
T Consensus       293 ~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~---~g~~~~PTv~~~v~~~~~i~  368 (472)
T COG1012         293 VERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP---GGYFVEPTILEGVTPDMRIA  368 (472)
T ss_pred             HHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC---CCeEECCEEEecCCCCChhh
Confidence            9999999 66 8999988999999999999999999999999999999999999832   28999999999999999999


Q ss_pred             ee-------eeeEecCcccccC
Q psy7043         153 RF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e-------pv~~v~~~~~ai~  167 (167)
                      +|       +|+++.++||||+
T Consensus       369 ~eEiFGPVl~v~~~~~~dEAi~  390 (472)
T COG1012         369 REEIFGPVLPVIRFKDEEEAIE  390 (472)
T ss_pred             hccccCCceEEEEeCCHHHHHH
Confidence            99       3778888888874

>KOG2450|consensus

Probab=100.00  E-value=1.8e-44  Score=294.22  Aligned_cols=162  Identities=30%  Similarity=0.450  Sum_probs=151.8

Q ss_pred             CceEEeecChhhh--------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT--------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g--------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |.+|+||||+.+|        ..++|||+||||||||.||++|+|++.+++.++++.|+|+||+|++.+|+|||+++||+
T Consensus       238 v~kiaFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iyde  317 (501)
T KOG2450|consen  238 VDKVAFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDE  317 (501)
T ss_pred             CceEEecCCCcchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHH
Confidence            5789999999999        26799999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHh-hccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCce
Q psy7043          73 FISKFSEKIKL-LVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        73 f~~~l~~~~~~-~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      |+++++++..+ +++|+|.++.+..||.+++.+++||.+||+.++++|+++++||.+.. ..|||++|||+.+++++|+|
T Consensus       318 fv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g-~~Gyfi~Ptv~~~v~~~m~i  396 (501)
T KOG2450|consen  318 FVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLG-DKGYFIKPTVFTNVTDDMRI  396 (501)
T ss_pred             HHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccC-CCceEECCeeccCCChhhhh
Confidence            99999999966 99999999999999999999999999999999999999999998754 37999999999999999999


Q ss_pred             eee----eeeEecCcc
Q psy7043         152 YRF----PCRLVDTIP  163 (167)
Q Consensus       152 ~~e----pv~~v~~~~  163 (167)
                      ++|    ||+.|..|+
T Consensus       397 ~~EEIFGPVv~v~~F~  412 (501)
T KOG2450|consen  397 AKEEIFGPVVVVLKFK  412 (501)
T ss_pred             hHhhccCceEEEEecC
Confidence            999    555555554

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=4.7e-44  Score=299.22  Aligned_cols=163  Identities=15%  Similarity=0.258  Sum_probs=150.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhh-hhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKF-RNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+++|       +++++|++||||||||+||++|+|++.|++.+++++| .|+||.|++++|+|||++++|+
T Consensus       189 vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~  268 (484)
T PLN02174        189 WDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPK  268 (484)
T ss_pred             CCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHH
Confidence            5789999999998       5899999999999999999999999999999999999 6999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++||..+.  +|+|++|||+.+++++|+++
T Consensus       269 f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~~~--~g~~~~PTvl~~v~~~~~i~  344 (484)
T PLN02174        269 VIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEKDR--ENLKIAPTILLDVPLDSLIM  344 (484)
T ss_pred             HHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCcCC--CCCEEEEEEEecCCCCChhh
Confidence            9999999999999999987 78999999999999999999997 78999999997642  58999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       345 ~eEiFGPVl~v~~~~~~~eai~  366 (484)
T PLN02174        345 SEEIFGPLLPILTLNNLEESFD  366 (484)
T ss_pred             cCCcCCCeEEEecCCCHHHHHH
Confidence            99    3   666677777763

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=9.4e-44  Score=297.70  Aligned_cols=166  Identities=25%  Similarity=0.416  Sum_probs=155.4

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       216 v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f  295 (472)
T TIGR03374       216 VRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTL  295 (472)
T ss_pred             cCEEEEECCHHHHHHHHHHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHH
Confidence            5799999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCC-CEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKG-AKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G-a~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|+++++++||+++..+++++.++|++++++| +++++||...+. .|+|++|||+.+++++|+++
T Consensus       296 ~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~-~g~~~~Ptvl~~v~~~~~i~  374 (472)
T TIGR03374       296 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKG-NGYYFAPTLLAGAKQDDAIV  374 (472)
T ss_pred             HHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCC-CCeEEeeEEEeCCCCCChhh
Confidence            9999999999999999999999999999999999999999999999 799999976432 58999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.++++||||+
T Consensus       375 ~eE~FGPvl~v~~~~~~~eai~  396 (472)
T TIGR03374       375 QKEVFGPVVSITSFDDEEQVVN  396 (472)
T ss_pred             hCCccCceEEEEEECCHHHHHH
Confidence            99    3   677778888773

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=1.3e-43  Score=298.74  Aligned_cols=166  Identities=30%  Similarity=0.477  Sum_probs=155.2

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+.+|       + ++++|++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||+++|++
T Consensus       238 v~~V~FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~  317 (501)
T PLN02766        238 VDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDE  317 (501)
T ss_pred             CCEEEEECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHH
Confidence            5789999999987       3 5899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|+++
T Consensus       318 f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~  396 (501)
T PLN02766        318 FVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGD-KGYYIEPTIFTDVTEDMKIA  396 (501)
T ss_pred             HHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCC-CCeEEeeEEEecCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999976433 58999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       397 ~eE~FGPVl~v~~~~~~deai~  418 (501)
T PLN02766        397 QDEIFGPVMSLMKFKTVEEAIK  418 (501)
T ss_pred             hCCccCceEEEEEeCCHHHHHH
Confidence            99    3   666777888774

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=3.2e-43  Score=299.51  Aligned_cols=166  Identities=25%  Similarity=0.459  Sum_probs=153.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +++|
T Consensus       328 Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f  406 (604)
T PLN02419        328 IRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSW  406 (604)
T ss_pred             CCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHH
Confidence            5789999999998       5889999999999999999999999999999999999999999999999999999 8999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC---CCCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP---TIGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.+++++|||++++.+++++.++|++|+++|+++++||....   ..+|+|++|||+.+++++|+
T Consensus       407 ~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~  486 (604)
T PLN02419        407 EDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDME  486 (604)
T ss_pred             HHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCH
Confidence            999999999999999999999999999999999999999999999999999997531   12589999999999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.+++++|||+
T Consensus       487 i~~eEiFGPVl~V~~~~~~dEAI~  510 (604)
T PLN02419        487 CYKEEIFGPVLVCMQANSFDEAIS  510 (604)
T ss_pred             HHcCCCcCCEEEEEecCCHHHHHH
Confidence            9999    3   666777777763

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=4.3e-43  Score=289.00  Aligned_cols=166  Identities=30%  Similarity=0.513  Sum_probs=155.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       ++++||+++|||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       151 v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f  230 (409)
T PRK10090        151 VAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQF  230 (409)
T ss_pred             cCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHH
Confidence            5789999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCC-CCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVS-GVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~-~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.++ ++++||++++.+++++.++|++++++|+++++||..++. .|+|++|||+.+++++|+++
T Consensus       231 ~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~Ptvl~~v~~~~~i~  309 (409)
T PRK10090        231 VNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEG-KGYYYPPTLLLDVRQEMSIM  309 (409)
T ss_pred             HHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCeEEecEEEeCCCCCCHHH
Confidence            9999999999999999997 899999999999999999999999999999999976543 58999999999999999999


Q ss_pred             ee-------eeeEecCcccccC
Q psy7043         153 RF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e-------pv~~v~~~~~ai~  167 (167)
                      +|       +|+.+++++|||+
T Consensus       310 ~eE~FgPvl~v~~~~~~~eai~  331 (409)
T PRK10090        310 HEETFGPVLPVVAFDTLEEAIA  331 (409)
T ss_pred             hCCCCCceEEEEEECCHHHHHH
Confidence            99       3677777888874

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=4e-43  Score=296.92  Aligned_cols=165  Identities=21%  Similarity=0.320  Sum_probs=151.8

Q ss_pred             CceEEeecChhhh-------ccCCC------ceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------QKTQP------RPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~------~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|+||||+++|       +++++      |++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||+
T Consensus       249 v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~  328 (522)
T cd07123         249 LAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPE  328 (522)
T ss_pred             cCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcH
Confidence            5789999999998       45665      8999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC-CCEEEeCCccCCCCCCceEeeEEEecCC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKK-GAKVLLGGKPNPTIGELYYEPTLITDIT  146 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~-Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~  146 (167)
                      ++|++|+++|+++++++++|+|+++++++||++++.+++++.++|++++++ |+++++||..+.. .|+|++|||+.+++
T Consensus       329 ~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~-~g~f~~PTvl~~v~  407 (522)
T cd07123         329 SLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDS-VGYFVEPTVIETTD  407 (522)
T ss_pred             HHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCC-CCceEcCEEEeCCC
Confidence            999999999999999999999999999999999999999999999999999 9999999976432 58999999999999


Q ss_pred             CCCceeee----eeeEecC-----ccccc
Q psy7043         147 PEMDCYRF----PCRLVDT-----IPTYI  166 (167)
Q Consensus       147 ~~~~i~~e----pv~~v~~-----~~~ai  166 (167)
                      ++|++++|    ||+.|..     ++|+|
T Consensus       408 ~~~~i~~eEiFGPVl~V~~~~~~~~~eai  436 (522)
T cd07123         408 PKHKLMTEEIFGPVLTVYVYPDSDFEETL  436 (522)
T ss_pred             CCChhhhcCCCCCeEEEEEeCCCCHHHHH
Confidence            99999999    5666643     46666

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=4e-43  Score=292.47  Aligned_cols=166  Identities=39%  Similarity=0.627  Sum_probs=155.3

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +.+++|++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||+++|++|
T Consensus       198 i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f  277 (448)
T TIGR01780       198 VRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEF  277 (448)
T ss_pred             CCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..++. +|+|++|||+.+++++|++++
T Consensus       278 ~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~  356 (448)
T TIGR01780       278 AKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHEL-GGNFFEPTVLSNVTQDMLVAK  356 (448)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCeeEcCEEEecCCCCChHhh
Confidence            9999999999999999999999999999999999999999999999999999976543 589999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       357 eE~FGPvl~v~~~~~~~eai~  377 (448)
T TIGR01780       357 EETFGPLAPVFKFDDEEEVIA  377 (448)
T ss_pred             CCCCCceEEEEEECCHHHHHH
Confidence            9    3   666777777763

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=5.2e-43  Score=293.73  Aligned_cols=166  Identities=22%  Similarity=0.399  Sum_probs=155.4

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|
T Consensus       221 v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f  300 (477)
T cd07113         221 VAKVSFTGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDEL  300 (477)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHH
Confidence            5789999999988       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|++++++|||++++.+++++.++|++|+++|+++++||..... .|+|++|||+.+++++|++++
T Consensus       301 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~-~g~~~~Ptvl~~v~~~~~~~~  379 (477)
T cd07113         301 VTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG-EGYFVQPTLVLARSADSRLMR  379 (477)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC-CCeeEeCEEEecCCCCChHHh
Confidence            9999999999999999999999999999999999999999999999999999976532 589999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       380 eE~FgPvl~v~~~~~~deai~  400 (477)
T cd07113         380 EETFGPVVSFVPYEDEEELIQ  400 (477)
T ss_pred             CCCCCCeEEEEEeCCHHHHHH
Confidence            8       3677788888874

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=7e-43  Score=293.28  Aligned_cols=165  Identities=26%  Similarity=0.481  Sum_probs=152.8

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|.||||+++|       + ++++|++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||+++|++
T Consensus       227 v~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~  306 (486)
T cd07140         227 VRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDE  306 (486)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHH
Confidence            5799999999998       3 3899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|.+++++|||++++.+++++.++|++|+++|+++++||...+. +|+|++|||+.+++++|+++
T Consensus       307 f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~  385 (486)
T cd07140         307 FVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDR-PGFFFEPTVFTDVEDHMFIA  385 (486)
T ss_pred             HHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC-CCeeECCEEEeCCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999976433 58999999999999999999


Q ss_pred             ee----eeeEecC-----ccccc
Q psy7043         153 RF----PCRLVDT-----IPTYI  166 (167)
Q Consensus       153 ~e----pv~~v~~-----~~~ai  166 (167)
                      +|    ||+.|..     ++|||
T Consensus       386 ~eE~FGPvl~v~~~~~~~~~eai  408 (486)
T cd07140         386 KEESFGPIMIISKFDDGDVDGVL  408 (486)
T ss_pred             hCCCCCCeEEEEEcCCCCHHHHH
Confidence            99    5555544     55665

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=7.3e-43  Score=291.40  Aligned_cols=166  Identities=34%  Similarity=0.532  Sum_probs=155.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       ++++||++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       202 i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  281 (457)
T PRK09406        202 VAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAF  281 (457)
T ss_pred             cCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|+++.++|+++++||..++. +|+|++|||+.+++++|++++
T Consensus       282 ~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~  360 (457)
T PRK09406        282 AEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDG-PGWFYPPTVITDITPDMRLYT  360 (457)
T ss_pred             HHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCceEccEEeecCCCCCHHhh
Confidence            9999999999999999999999999999999999999999999999999999987543 589999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       361 eE~FgPvl~v~~~~~~~eai~  381 (457)
T PRK09406        361 EEVFGPVASLYRVADIDEAIE  381 (457)
T ss_pred             CCCCCceEEEEeeCCHHHHHH
Confidence            9    3   666777777763

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=1e-42  Score=292.17  Aligned_cols=167  Identities=22%  Similarity=0.330  Sum_probs=155.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       220 vd~v~fTGS~~~G~~i~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f  299 (481)
T TIGR03216       220 VDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRF  299 (481)
T ss_pred             CCEEEEECCHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC----CCCCceEeeEEEecCCCCC
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP----TIGELYYEPTLITDITPEM  149 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~----~~~g~~~~Ptvl~~~~~~~  149 (167)
                      +++|+++++++++|+|.+++++|||++++.+++++.++|++|+++|+++++||..+.    ..+|+|++|||+.+++++|
T Consensus       300 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~  379 (481)
T TIGR03216       300 VAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSA  379 (481)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCC
Confidence            999999999999999999999999999999999999999999999999999997542    1258999999999999999


Q ss_pred             ceeee-------eeeEecCcccccC
Q psy7043         150 DCYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       150 ~i~~e-------pv~~v~~~~~ai~  167 (167)
                      ++++|       +|+.+++++|||+
T Consensus       380 ~i~~eE~FgPvl~V~~~~~~~eai~  404 (481)
T TIGR03216       380 RVVTEEIFGPCCHIAPFDSEEEVIA  404 (481)
T ss_pred             HHHhCCCCCceEEEEEeCCHHHHHH
Confidence            99999       3777778888774

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=1.2e-42  Score=292.74  Aligned_cols=166  Identities=44%  Similarity=0.664  Sum_probs=155.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       240 v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f  319 (498)
T PLN02278        240 VRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKF  319 (498)
T ss_pred             cCEEEEECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||...+. +|+|++|||+.+++++|++++
T Consensus       320 ~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~-~g~~~~Ptvl~~v~~~~~~~~  398 (498)
T PLN02278        320 AEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSL-GGTFYEPTVLGDVTEDMLIFR  398 (498)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC-CCceEeeEEEecCCCCChhhh
Confidence            9999999999999999999999999999999999999999999999999999976432 589999999999999999999


Q ss_pred             ee-------eeEecCcccccC
Q psy7043         154 FP-------CRLVDTIPTYIR  167 (167)
Q Consensus       154 ep-------v~~v~~~~~ai~  167 (167)
                      ||       |+.++++||||+
T Consensus       399 ~E~FGPVl~v~~~~~~deai~  419 (498)
T PLN02278        399 EEVFGPVAPLTRFKTEEEAIA  419 (498)
T ss_pred             CCCcCCEEEEEeeCCHHHHHH
Confidence            93       667788888774

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-42  Score=289.57  Aligned_cols=166  Identities=24%  Similarity=0.443  Sum_probs=155.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       205 v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f  284 (462)
T PRK13968        205 IAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAF  284 (462)
T ss_pred             CCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.+.++++||+++..+++++.+++++++.+|+++++||..... .|+|++|||+.+++++|++++
T Consensus       285 ~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~-~g~~~~Ptvl~~v~~~~~~~~  363 (462)
T PRK13968        285 TERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAG-AGNYYAPTVLANVTPEMTAFR  363 (462)
T ss_pred             HHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CceEECCEEEeCCCCCChHHh
Confidence            9999999999999999999999999999999999999999999999999999976432 489999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       364 eE~FGPVl~v~~~~d~~eai~  384 (462)
T PRK13968        364 EELFGPVAAITVAKDAEHALE  384 (462)
T ss_pred             CCCcCCEEEEEEECCHHHHHH
Confidence            9    3   666777777763

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=2.1e-42  Score=290.30  Aligned_cols=166  Identities=29%  Similarity=0.432  Sum_probs=155.7

Q ss_pred             CceEEeecChhhh-------cc-CCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------QK-TQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~-~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|.||||+.+|       +. ++||++||||||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++|++
T Consensus       225 vd~V~ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~  304 (481)
T cd07141         225 IDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDE  304 (481)
T ss_pred             CCEEEEECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHH
Confidence            5789999999998       33 889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|+++++++||++++.+++++.++|++|+.+|+++++||...+. .|+|++|||+.+++++|+++
T Consensus       305 f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~  383 (481)
T cd07141         305 FVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGD-KGYFIQPTVFSDVTDDMRIA  383 (481)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCeEEeeEEEecCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999987543 58999999999999999999


Q ss_pred             ee-------eeeEecCcccccC
Q psy7043         153 RF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e-------pv~~v~~~~~ai~  167 (167)
                      +|       +|+.+++++|||+
T Consensus       384 ~eE~FgPvl~v~~~~~~~eai~  405 (481)
T cd07141         384 KEEIFGPVQQIFKFKTIDEVIE  405 (481)
T ss_pred             hccccCCeEEEEeeCCHHHHHH
Confidence            99       3777788888874

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=2.4e-42  Score=287.61  Aligned_cols=166  Identities=31%  Similarity=0.430  Sum_probs=155.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |.+|.||||+++|       +++++|++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       192 vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f  271 (446)
T cd07106         192 IRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEF  271 (446)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHH
Confidence            4689999999997       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++++++..+|+++++||...+. .|+|++|||+.+++++|++++
T Consensus       272 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~v~~~~~i~~  350 (446)
T cd07106         272 CEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDG-PGYFIPPTIVDDPPEGSRIVD  350 (446)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCeeEcCEEEeCCCCCCHHHh
Confidence            9999999999999999999999999999999999999999999999999999986542 589999999999999999998


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       351 ~E~FgPvl~v~~~~~~~eai~  371 (446)
T cd07106         351 EEQFGPVLPVLKYSDEDEVIA  371 (446)
T ss_pred             cCccCCeEEEEeeCCHHHHHH
Confidence            8    3   677788888874

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=2.5e-42  Score=290.95  Aligned_cols=165  Identities=23%  Similarity=0.401  Sum_probs=154.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|
T Consensus       237 v~~v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f  316 (508)
T PLN02315        237 IPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDV  316 (508)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHH
Confidence            5789999999998       477899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+. +|+|++|||+ +++++|++++
T Consensus       317 ~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~-~g~~~~Ptvl-~v~~~~~i~~  394 (508)
T PLN02315        317 LEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIES-EGNFVQPTIV-EISPDADVVK  394 (508)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-CCeEEecEEE-ecCCCChHHh
Confidence            9999999999999999999999999999999999999999999999999999976433 5899999999 6999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.++++||||+
T Consensus       395 eE~FGPVl~V~~~~~~deai~  415 (508)
T PLN02315        395 EELFGPVLYVMKFKTLEEAIE  415 (508)
T ss_pred             CCCcCCEEEEEEeCCHHHHHH
Confidence            9    3   667777888874

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=3.1e-42  Score=288.84  Aligned_cols=167  Identities=31%  Similarity=0.425  Sum_probs=155.7

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       215 v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  294 (475)
T cd07117         215 LDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEF  294 (475)
T ss_pred             CCEEEEECcHHHHHHHHHHHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHH
Confidence            5789999999987       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||.....   ++|+|++|||+.+++++|+
T Consensus       295 ~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~  374 (475)
T cd07117         295 VAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMR  374 (475)
T ss_pred             HHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCCh
Confidence            9999999999999999999999999999999999999999999999999999976431   2589999999999999999


Q ss_pred             eeee-------eeeEecCcccccC
Q psy7043         151 CYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e-------pv~~v~~~~~ai~  167 (167)
                      +++|       +|+.+++++|||+
T Consensus       375 i~~eE~FgPvl~v~~~~~~~eai~  398 (475)
T cd07117         375 VAQEEIFGPVATVIKFKTEDEVID  398 (475)
T ss_pred             hhhCCCcCCeEEEEEECCHHHHHH
Confidence            9998       3677788888874

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=2.7e-42  Score=286.15  Aligned_cols=166  Identities=33%  Similarity=0.539  Sum_probs=154.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       ++++||++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       175 i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f  254 (429)
T cd07100         175 VRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEF  254 (429)
T ss_pred             CCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHH
Confidence            5799999999998       478899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|++++.++++|+|+++++++||++++.+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|++++
T Consensus       255 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~Ptv~~~~~~~~~~~~  333 (429)
T cd07100         255 LEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDG-PGAFYPPTVLTDVTPGMPAYD  333 (429)
T ss_pred             HHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCeEEcCEEeecCCCCCHHHh
Confidence            9999999999999999999999999999999999999999999999999999976532 489999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       334 eE~fgPvl~v~~~~~~~eai~  354 (429)
T cd07100         334 EELFGPVAAVIKVKDEEEAIA  354 (429)
T ss_pred             CCCCCCeEEEeeeCCHHHHHH
Confidence            9    3   666677777763

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=3e-42  Score=287.82  Aligned_cols=167  Identities=28%  Similarity=0.471  Sum_probs=154.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhh-hhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASK-FRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~-~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+++|       +++++|++||||||||+||++|+|++.|++.+++++ |.|+||.|++++|+|||++++++
T Consensus       195 i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~  274 (456)
T cd07107         195 VKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDE  274 (456)
T ss_pred             CCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHH
Confidence            5789999999998       468999999999999999999999999999999995 99999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCC
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEM  149 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~  149 (167)
                      |+++|+++++++++|+|.++++++||++++.+++++.++|++|+++|+++++||.....   ..|+|++|||+.+++++|
T Consensus       275 f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~  354 (456)
T cd07107         275 VLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGM  354 (456)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCC
Confidence            99999999999999999999999999999999999999999999999999999975321   258999999999999999


Q ss_pred             ceeeee-------eeEecCcccccC
Q psy7043         150 DCYRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       150 ~i~~ep-------v~~v~~~~~ai~  167 (167)
                      ++++||       |+.+++++|||+
T Consensus       355 ~i~~eE~FGPvl~i~~~~~~~eai~  379 (456)
T cd07107         355 RIAREEIFGPVLSVLRWRDEAEMVA  379 (456)
T ss_pred             hhhhCCCCCceEEEEeeCCHHHHHH
Confidence            999993       777778888774

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=3.9e-42  Score=291.39  Aligned_cols=166  Identities=27%  Similarity=0.387  Sum_probs=154.8

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+.+|       + .++||+++|||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++
T Consensus       275 vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~  354 (538)
T PLN02466        275 VDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDE  354 (538)
T ss_pred             cCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHH
Confidence            5789999999998       2 4899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|++++.++++|+|.++++++||+++..+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|+++
T Consensus       355 f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~-~g~~i~Ptvl~~v~~d~~i~  433 (538)
T PLN02466        355 FVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGS-KGYYIQPTVFSNVQDDMLIA  433 (538)
T ss_pred             HHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCC-CceEEEEEEEecCCCCCchh
Confidence            99999999999999999999999999999999999999999999999999999986533 58999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       434 ~eE~FGPVl~v~~~~d~deAi~  455 (538)
T PLN02466        434 QDEIFGPVQSILKFKDLDEVIR  455 (538)
T ss_pred             cCCccCcEEEEEEeCCHHHHHH
Confidence            98    3   677778888774

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=3.1e-42  Score=289.03  Aligned_cols=166  Identities=28%  Similarity=0.417  Sum_probs=154.8

Q ss_pred             CceEEeecChhhh-------cc-CCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------QK-TQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~-~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|.||||+++|       ++ +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++
T Consensus       221 v~~v~fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~  300 (476)
T cd07142         221 VDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDE  300 (476)
T ss_pred             CCEEEEECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHH
Confidence            5789999999988       33 899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|++++.++++|+|.++++++||++++.+++++.+++++++++|+++++||..... .|+|++|||+.+++++|+++
T Consensus       301 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~  379 (476)
T cd07142         301 FVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGS-KGYYIQPTIFSDVKDDMKIA  379 (476)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCC-CCeeEccEEeecCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999976543 58999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       380 ~eE~FgPvl~v~~~~~~~eai~  401 (476)
T cd07142         380 RDEIFGPVQSILKFKTVDEVIK  401 (476)
T ss_pred             hCCccCceEEEEeeCCHHHHHH
Confidence            99    3   667777777874

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=3.9e-42  Score=288.22  Aligned_cols=165  Identities=27%  Similarity=0.433  Sum_probs=153.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       +++++|++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       215 vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  294 (474)
T cd07130         215 VPLVSFTGSTAVGRQVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEV  294 (474)
T ss_pred             CCEEEEECchHHHHHHHHHHHhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|+++++++||++++.+++++.++|++|+++|+++++||...+. +|+|++|||+.++++ |++++
T Consensus       295 ~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~~~~-~~i~~  372 (474)
T cd07130         295 LERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDG-PGNYVEPTIVEGLSD-APIVK  372 (474)
T ss_pred             HHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-CCeEEccEEEecCCC-CHHHh
Confidence            9999999999999999999999999999999999999999999999999999986543 589999999988776 99999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       373 eE~FGPvl~v~~~~~~~eai~  393 (474)
T cd07130         373 EETFAPILYVLKFDTLEEAIA  393 (474)
T ss_pred             CCCcCCeEEEEEeCCHHHHHH
Confidence            8    3   666777777763

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=4.5e-42  Score=287.86  Aligned_cols=167  Identities=27%  Similarity=0.428  Sum_probs=154.3

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       215 v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  294 (473)
T cd07097         215 VDAVSFTGSTAVGRRIAAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRF  294 (473)
T ss_pred             CCEEEEECcHHHHHHHHHHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHH
Confidence            5789999999998       468999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++|+++|+++++||...+. ..|+|++|||+.+++++|+++
T Consensus       295 ~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~  374 (473)
T cd07097         295 VEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIA  374 (473)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhh
Confidence            9999999999999999999999999999999999999999999999999999976432 248999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       375 ~eE~FgPvl~v~~~~~~~eai~  396 (473)
T cd07097         375 REEIFGPVAAVIRVRDYDEALA  396 (473)
T ss_pred             hCCCcCceEEEeccCCHHHHHH
Confidence            99    3   566666677663

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-42  Score=288.59  Aligned_cols=166  Identities=26%  Similarity=0.453  Sum_probs=155.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|
T Consensus       217 vd~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f  296 (475)
T PRK13473        217 VRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDL  296 (475)
T ss_pred             CCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCC-CEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKG-AKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G-a~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|+++.++| +++++||...+. .|+|++|||+.+++++++++
T Consensus       297 ~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~  375 (475)
T PRK13473        297 VAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDG-KGYYYEPTLLAGARQDDEIV  375 (475)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCC-CceeEcCEEEecCCCCChhh
Confidence            9999999999999999999999999999999999999999999999 999999986533 58999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       376 ~eE~FgPvl~v~~~~~~deai~  397 (475)
T PRK13473        376 QREVFGPVVSVTPFDDEDQAVR  397 (475)
T ss_pred             hCCccCCeEEEeccCCHHHHHH
Confidence            99    3   666777777774

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=4.6e-42  Score=286.55  Aligned_cols=167  Identities=33%  Similarity=0.527  Sum_probs=154.7

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      ++.|.||||+++|       +++++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       196 ~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f  275 (454)
T cd07101         196 ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEF  275 (454)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHH
Confidence            3679999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++..++++++++|+++++||......+++|++|||+.+++++|++++
T Consensus       276 ~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~  355 (454)
T cd07101         276 VRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFA  355 (454)
T ss_pred             HHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHh
Confidence            99999999999999999999999999999999999999999999999999998653222479999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       356 eE~FgPvl~v~~~~~~~eai~  376 (454)
T cd07101         356 EETFGPVVSIYRVADDDEAIE  376 (454)
T ss_pred             CCCCCceEEEEeeCCHHHHHH
Confidence            9       3777788888874

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=6.5e-42  Score=287.85  Aligned_cols=167  Identities=26%  Similarity=0.392  Sum_probs=154.5

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       215 v~~V~fTGS~~~G~~i~~~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f  294 (488)
T TIGR02299       215 VKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDF  294 (488)
T ss_pred             cCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC------CCCceEeeEEEecCCC
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT------IGELYYEPTLITDITP  147 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~------~~g~~~~Ptvl~~~~~  147 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+.      .+|+|++|||+.++++
T Consensus       295 ~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~  374 (488)
T TIGR02299       295 VEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADN  374 (488)
T ss_pred             HHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCC
Confidence            9999999999999999999999999999999999999999999999999999875321      2489999999999999


Q ss_pred             CCceeee----e---eeEecCcccccC
Q psy7043         148 EMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       148 ~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      +|++++|    |   |+.+++++|||+
T Consensus       375 ~~~i~~eE~FgPvl~v~~~~~~~eai~  401 (488)
T TIGR02299       375 HMRIAQEEIFGPVLTVIPFKDEEEAIE  401 (488)
T ss_pred             CCchhhCCCcCCeEEEEeeCCHHHHHH
Confidence            9999998    3   666677777763

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-42  Score=287.81  Aligned_cols=167  Identities=23%  Similarity=0.376  Sum_probs=155.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++|++|
T Consensus       221 vd~V~fTGS~~~g~~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  300 (488)
T PRK13252        221 IAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAF  300 (488)
T ss_pred             CCEEEEECcHHHHHHHHHHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHH
Confidence            5789999999997       577999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||...+.   ..|+|++|||+.+++++|+
T Consensus       301 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~  380 (488)
T PRK13252        301 EARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMT  380 (488)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCCh
Confidence            9999999999999999999999999999999999999999999999999999964321   2589999999999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.+++++|||+
T Consensus       381 i~~eE~FgPvl~v~~~~~~~eai~  404 (488)
T PRK13252        381 IVREEIFGPVMSVLTFDDEDEVIA  404 (488)
T ss_pred             HhhCCCCCceEEEEeeCCHHHHHH
Confidence            9998    3   667777888774

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=8.2e-42  Score=289.26  Aligned_cols=162  Identities=21%  Similarity=0.294  Sum_probs=148.2

Q ss_pred             CceEEeecChhhh-------ccCCC------ceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------QKTQP------RPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~------~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|+||||+++|       +++++      +++||||||||+||++|+|++.|++.+++++|.|+||+|++++|+|||+
T Consensus       249 v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~  328 (533)
T TIGR01236       249 LAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPH  328 (533)
T ss_pred             cCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEch
Confidence            5789999999998       46665      4999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCC--CEEEeCCccCCCCCCceEeeEEEecC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKG--AKVLLGGKPNPTIGELYYEPTLITDI  145 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G--a~v~~gg~~~~~~~g~~~~Ptvl~~~  145 (167)
                      ++|++|+++|+++++++++|+|.++++++||++++.+++++.++++++.++|  +++++||..... .|+|++|||+.++
T Consensus       329 ~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~-~G~~~~PTvl~~~  407 (533)
T TIGR01236       329 SVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDS-EGYFVEPTVILSK  407 (533)
T ss_pred             hHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCC-CCeEEeeEEEecC
Confidence            9999999999999999999999999999999999999999999999999987  799999976432 5899999999999


Q ss_pred             CCCCceeee----eeeEecCcc
Q psy7043         146 TPEMDCYRF----PCRLVDTIP  163 (167)
Q Consensus       146 ~~~~~i~~e----pv~~v~~~~  163 (167)
                      +++|++++|    ||+.|..|+
T Consensus       408 ~~d~~i~~eE~FGPVl~v~~~~  429 (533)
T TIGR01236       408 DPTDPLMVEEIFGPVLTVYVYP  429 (533)
T ss_pred             CCCChhhcccCCCCeEEEEEeC
Confidence            999999999    555554443

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=7.6e-42  Score=286.80  Aligned_cols=167  Identities=25%  Similarity=0.465  Sum_probs=154.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|+++|||||||+||++|||++.+++.+++++|.|+||.|++++|||||++++++|
T Consensus       215 v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f  294 (478)
T cd07085         215 IKAVSFVGSTPVGEYIYERAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEW  294 (478)
T ss_pred             cCEEEEECCHHHHHHHHHHHhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHH
Confidence            5789999999998       477999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||.....   .+|+|++|||+.+++++|+
T Consensus       295 ~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~  374 (478)
T cd07085         295 IPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMK  374 (478)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCCh
Confidence            9999999999999999999999999999999999999999999999999999975321   2589999999999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.+++++|||+
T Consensus       375 ~~~eE~FgPvl~v~~~~~~deai~  398 (478)
T cd07085         375 IYKEEIFGPVLSIVRVDTLDEAIA  398 (478)
T ss_pred             hhhCcCcCCeEEEEEeCCHHHHHH
Confidence            9988    3   666777777874

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=8.9e-42  Score=286.42  Aligned_cols=167  Identities=26%  Similarity=0.345  Sum_probs=155.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCC-----CHHHHHHHHHHhhhhhcCCceecCcEEEEecc
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESA-----NIDLAIQGALASKFRNCGQTCISANRFLIHEK   68 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~da-----d~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~   68 (167)
                      |++|.||||+.+|       +++++|++||||||||+||++|+     |++.+++.+++++|.|+||.|++++|+|||++
T Consensus       215 v~~V~fTGs~~~g~~i~~~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~  294 (480)
T cd07559         215 IAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQES  294 (480)
T ss_pred             CCEEEEECcHHHHHHHHHHHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHH
Confidence            5789999999998       58899999999999999999999     99999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecC
Q psy7043          69 RYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDI  145 (167)
Q Consensus        69 i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~  145 (167)
                      ++++|+++|+++++++++|+|+++++++||++++.+++++.++|++|+.+|+++++||...+.   ..|+|++|||+.++
T Consensus       295 i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~  374 (480)
T cd07559         295 IYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGG  374 (480)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCC
Confidence            999999999999999999999999999999999999999999999999999999999976431   25899999999999


Q ss_pred             CCCCceeee----e---eeEecCcccccC
Q psy7043         146 TPEMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       146 ~~~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|++++|    |   |+.+++++|||+
T Consensus       375 ~~~~~~~~eE~FgPvl~v~~~~~~~eai~  403 (480)
T cd07559         375 NNDMRIFQEEIFGPVLAVITFKDEEEAIA  403 (480)
T ss_pred             CCCCcHHhcCCcCceEEEEeeCCHHHHHH
Confidence            999999999    3   666777777763

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=1.1e-41  Score=284.23  Aligned_cols=166  Identities=31%  Similarity=0.483  Sum_probs=154.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       197 vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f  276 (453)
T cd07099         197 VDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEF  276 (453)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHH
Confidence            5789999999997       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||..... +|+|++|||+.+++++|++++
T Consensus       277 ~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptil~~~~~~~~~~~  355 (453)
T cd07099         277 VARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNG-GGPFYEPTVLTDVPHDMDVMR  355 (453)
T ss_pred             HHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCC-CCeEEecEEEecCCCCCHHHh
Confidence            9999999999999999999999999999999999999999999999999999976532 589999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       356 ~E~FgPvl~v~~~~~~~eai~  376 (453)
T cd07099         356 EETFGPVLPVMPVADEDEAIA  376 (453)
T ss_pred             CCCcCCeeEEEeeCCHHHHHH
Confidence            9    3   666777777763

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=9.6e-42  Score=294.63  Aligned_cols=165  Identities=21%  Similarity=0.293  Sum_probs=151.9

Q ss_pred             CceEEeecChhhh---------ccCCCceeEeCCCCCeeeEeCCCC-----HHHHHHHHHHhhhhhcCCceecCcEEEEe
Q psy7043           1 MRLFGLKNSFPVT---------QKTQPRPKVMPREASLNMVFESAN-----IDLAIQGALASKFRNCGQTCISANRFLIH   66 (167)
Q Consensus         1 ~~~v~ftGs~~~g---------~~~~~~v~lElgGknp~iV~~dad-----~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~   66 (167)
                      +++|+||||+++|         +++++|++||||||||+||++|||     ++.+++.+++++|.|+||.|++++|+|||
T Consensus       222 ~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~  301 (663)
T TIGR02278       222 RDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVP  301 (663)
T ss_pred             CCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEe
Confidence            4689999999998         268899999999999999999999     99999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCC
Q psy7043          67 EKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDIT  146 (167)
Q Consensus        67 ~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~  146 (167)
                      ++++++|+++|+++++++++|+|+++++++||++++.+++++.++|++|+++|+++++||..+.  +|+|++|||+.+++
T Consensus       302 ~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~--~g~~~~PTvl~~~~  379 (663)
T TIGR02278       302 KALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL--DGAFFPPTLLLAED  379 (663)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC--CCeeEccEEEeeCC
Confidence            9999999999999999999999999999999999999999999999999999999999997643  48999999999999


Q ss_pred             CCC-ceeee----e---eeEecCcccccC
Q psy7043         147 PEM-DCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       147 ~~~-~i~~e----p---v~~v~~~~~ai~  167 (167)
                      ++| ++++|    |   |+.+++++|||+
T Consensus       380 ~~~~~i~~eE~FGPVl~V~~~~~~~eai~  408 (663)
T TIGR02278       380 PWAGAVHATEAFGPVATFFPYGDRAEAAR  408 (663)
T ss_pred             cchhhHHhccccCCeEEEEeeCCHHHHHH
Confidence            886 78887    4   566677777763

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=1.3e-41  Score=285.31  Aligned_cols=166  Identities=29%  Similarity=0.442  Sum_probs=154.3

Q ss_pred             CceEEeecChhhh-------cc-CCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------QK-TQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~-~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|.||||+.+|       +. +++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++++
T Consensus       221 vd~V~fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~  300 (476)
T cd07091         221 VDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDE  300 (476)
T ss_pred             cCEEEEECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHH
Confidence            5789999999998       34 889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|.++++++||++++.+++++.++++++.++|+++++||..+.. .|+|++|||+.+++++|+++
T Consensus       301 f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~-~~~~~~Ptvl~~v~~~~~~~  379 (476)
T cd07091         301 FVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGS-KGYFIQPTVFTDVKDDMKIA  379 (476)
T ss_pred             HHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC-CCceECcEEecCCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999987543 58999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       380 ~eE~FgPvl~v~~~~~~~eai~  401 (476)
T cd07091         380 KEEIFGPVVTILKFKTEDEVIE  401 (476)
T ss_pred             hCCCCCCeEEEeecCCHHHHHH
Confidence            98    3   666677777764

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=1.5e-41  Score=283.44  Aligned_cols=166  Identities=30%  Similarity=0.466  Sum_probs=155.7

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||||||||+||++|+|++.+++.+++++|.|+||.|+++++||||++++++|
T Consensus       197 id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f  276 (453)
T cd07115         197 VDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEF  276 (453)
T ss_pred             CCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|+++.++|+++++||..+.. .|+|++|||+.+++++|++++
T Consensus       277 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~  355 (453)
T cd07115         277 LERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGA-RGFFVEPTIFAAVPPEMRIAQ  355 (453)
T ss_pred             HHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC-CCceECCEEEecCCCCChHhh
Confidence            9999999999999999999999999999999999999999999999999999976532 589999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       356 eE~FgPvl~v~~~~~~~eai~  376 (453)
T cd07115         356 EEIFGPVVSVMRFRDEEEALR  376 (453)
T ss_pred             CCCcCceEEEEeeCCHHHHHH
Confidence            9       3777888888874

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=1.4e-41  Score=283.63  Aligned_cols=164  Identities=27%  Similarity=0.415  Sum_probs=152.7

Q ss_pred             CceEEeecChhhh------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHH
Q psy7043           1 MRLFGLKNSFPVT------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFI   74 (167)
Q Consensus         1 ~~~v~ftGs~~~g------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~   74 (167)
                      |++|+||||+++|      +...+|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++|+|+
T Consensus       203 v~~v~fTGs~~~G~~i~~~aa~~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~  282 (455)
T cd07148         203 VAFFSFIGSARVGWMLRSKLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFA  282 (455)
T ss_pred             CCEEEEECCHHHHHHHHHHhhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHH
Confidence            5789999999987      2345899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee
Q psy7043          75 SKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF  154 (167)
Q Consensus        75 ~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e  154 (167)
                      ++|+++++++++|+|+++++++||++++.+++++.++|++++.+|+++++||...   .++|++|||+.+++++|++++|
T Consensus       283 ~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~---~~~~~~Ptvl~~~~~~~~~~~e  359 (455)
T cd07148         283 QRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL---SDTTYAPTVLLDPPRDAKVSTQ  359 (455)
T ss_pred             HHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC---CCCeEcCEEEeCCCCCCHHHhC
Confidence            9999999999999999999999999999999999999999999999999999764   3789999999999999999988


Q ss_pred             ----e---eeEecCcccccC
Q psy7043         155 ----P---CRLVDTIPTYIR  167 (167)
Q Consensus       155 ----p---v~~v~~~~~ai~  167 (167)
                          |   |+.++++||||+
T Consensus       360 E~FgPvl~v~~~~~~deai~  379 (455)
T cd07148         360 EIFGPVVCVYSYDDLDEAIA  379 (455)
T ss_pred             CCcCCeEEEEecCCHHHHHH
Confidence                3   677788888874

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=2.1e-41  Score=285.34  Aligned_cols=167  Identities=27%  Similarity=0.433  Sum_probs=154.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +.++||+++|||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       231 v~~v~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f  310 (503)
T PLN02467        231 VDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEF  310 (503)
T ss_pred             CCEEEEECCHHHHHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||...+. ..|+|++|||+.+++++|+++
T Consensus       311 ~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~  390 (503)
T PLN02467        311 LEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIW  390 (503)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHh
Confidence            9999999999999999999999999999999999999999999999999999976431 258999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       391 ~eE~FgPvl~v~~~~~~~eAi~  412 (503)
T PLN02467        391 REEVFGPVLCVKTFSTEDEAIE  412 (503)
T ss_pred             hCCCCCceEEEEeeCCHHHHHH
Confidence            98    3   666677777763

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=1.8e-41  Score=283.85  Aligned_cols=167  Identities=31%  Similarity=0.556  Sum_probs=155.4

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       213 v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f  292 (468)
T cd07088         213 VGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEF  292 (468)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHH
Confidence            5789999999988       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++.+||++++.+++++.++|++++.+|+++++||..++..+|+|++|||+.+++++|++++
T Consensus       293 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~  372 (468)
T cd07088         293 MEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQ  372 (468)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhh
Confidence            99999999999999999999999999999999999999999999999999999765412589999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       373 ~E~fgPvl~v~~~~~~~eai~  393 (468)
T cd07088         373 EEIFGPVLPVVKFSSLDEAIE  393 (468)
T ss_pred             CCCcCCeEEEEecCCHHHHHH
Confidence            9       3667777777774

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=1.7e-41  Score=283.82  Aligned_cols=163  Identities=33%  Similarity=0.542  Sum_probs=153.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||+++|++|
T Consensus       211 v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f  290 (465)
T cd07151         211 PRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEF  290 (465)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHH
Confidence            5799999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++.+||++++.+++++.+++++++++|+++++||..    .|+|++|||+.+++++|++++
T Consensus       291 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~----~g~~~~Ptvl~~~~~~~~~~~  366 (465)
T cd07151         291 VEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA----EGNVLEPTVLSDVTNDMEIAR  366 (465)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc----CCEEEccEEEeCCCCCCchhh
Confidence            9999999999999999999999999999999999999999999999999999864    389999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       367 eE~FgPvl~v~~~~~~~eai~  387 (465)
T cd07151         367 EEIFGPVAPIIKADDEEEALE  387 (465)
T ss_pred             CcCcCCeEEEEeeCCHHHHHH
Confidence            8    3   666777777763

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=2.1e-41  Score=284.11  Aligned_cols=167  Identities=29%  Similarity=0.446  Sum_probs=155.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |.+|.||||+++|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       216 vd~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  295 (478)
T cd07086         216 VPLVSFTGSTEVGRRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF  295 (478)
T ss_pred             CCEEEEECcHHHHHHHHHHHhccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.+.++++||++++.+++++.++|++|+++|+++++||..... .+|+|++|||+.+++++|+++
T Consensus       296 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~  375 (478)
T cd07086         296 LERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIV  375 (478)
T ss_pred             HHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhh
Confidence            9999999999999999999999999999999999999999999999999999976431 148999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       376 ~eE~FgPVl~v~~~~~~deai~  397 (478)
T cd07086         376 QEETFAPILYVIKFDSLEEAIA  397 (478)
T ss_pred             cCCCcCCEEEEEEeCCHHHHHH
Confidence            99    3   667778888763

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=2.1e-41  Score=282.48  Aligned_cols=167  Identities=30%  Similarity=0.483  Sum_probs=155.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |.+|.||||+++|       +.+++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++++|
T Consensus       199 v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f  278 (454)
T cd07118         199 VDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAF  278 (454)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||...+...|+|++|||+.+++++|++++
T Consensus       279 ~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~  358 (454)
T cd07118         279 VAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAR  358 (454)
T ss_pred             HHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHh
Confidence            99999999999999999999999999999999999999999999999999999865422589999999999999999999


Q ss_pred             ee-------eeEecCcccccC
Q psy7043         154 FP-------CRLVDTIPTYIR  167 (167)
Q Consensus       154 ep-------v~~v~~~~~ai~  167 (167)
                      ||       |+.+++++|||+
T Consensus       359 eE~FgPvl~v~~~~~~~eai~  379 (454)
T cd07118         359 EEIFGPVLSVLTFDTVDEAIA  379 (454)
T ss_pred             CCCCCceEEEEEECCHHHHHH
Confidence            93       677777777763

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=2.2e-41  Score=282.72  Aligned_cols=167  Identities=28%  Similarity=0.420  Sum_probs=154.5

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      +++|.||||+++|       +++++|++||+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       203 ~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f  282 (459)
T cd07089         203 VDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEV  282 (459)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHH
Confidence            5789999999998       478899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||..... ++|+|++|||+.+++++|+++
T Consensus       283 ~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~  362 (459)
T cd07089         283 VEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIA  362 (459)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999976431 258999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.++++||||+
T Consensus       363 ~eE~FgPvl~v~~~~~~deai~  384 (459)
T cd07089         363 QEEIFGPVLVVIPYDDDDEAVR  384 (459)
T ss_pred             hCCCcCceEEEeccCCHHHHHH
Confidence            98    4   566666777763

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=2.1e-41  Score=284.35  Aligned_cols=167  Identities=25%  Similarity=0.427  Sum_probs=154.5

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++++|||++++++|
T Consensus       214 v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f  293 (482)
T cd07119         214 VDLVSFTGGTATGRSIMRAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKF  293 (482)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHH
Confidence            5789999999988       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.....   ..|+|++|||+.+++++|+
T Consensus       294 ~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~  373 (482)
T cd07119         294 VAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMR  373 (482)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCCh
Confidence            9999999999999999999999999999999999999999999999999999975431   2489999999999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.+++++|||+
T Consensus       374 i~~eE~FgPvl~v~~~~~~deai~  397 (482)
T cd07119         374 IVQEEIFGPVLTVERFDTEEEAIR  397 (482)
T ss_pred             HhhCCCCCceEEEeccCCHHHHHH
Confidence            9998    3   666677777763

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=3e-41  Score=285.73  Aligned_cols=167  Identities=34%  Similarity=0.564  Sum_probs=154.3

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      +++|.||||+++|       +++++|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       232 ~d~V~fTGs~~~g~~v~~~aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f  311 (524)
T PRK09407        232 ADYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEF  311 (524)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHH
Confidence            4689999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++..++++++++|+++++||......+|+|++|||+.+++++|++++
T Consensus       312 ~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~  391 (524)
T PRK09407        312 VRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAR  391 (524)
T ss_pred             HHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHh
Confidence            99999999999999999999999999999999999999999999999999998753222479999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       392 eE~FGPvl~v~~~~~~deai~  412 (524)
T PRK09407        392 EETFGPVVSVYPVADVDEAVE  412 (524)
T ss_pred             CCCCCCeEEEEeeCCHHHHHH
Confidence            9    3   666777777763

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=2.2e-41  Score=282.53  Aligned_cols=164  Identities=28%  Similarity=0.505  Sum_probs=153.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       203 v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f  282 (456)
T cd07145         203 VNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKF  282 (456)
T ss_pred             CCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHH
Confidence            5789999999988       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||..+   .|+|++|||+.+++++|++++
T Consensus       283 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~---~g~~~~Ptvl~~~~~~~~i~~  359 (456)
T cd07145         283 LKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD---EGSFFPPTVLENDTPDMIVMK  359 (456)
T ss_pred             HHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC---CCeEECCEeecCCCCCChHhh
Confidence            99999999999999999999999999999999999999999999999999999764   389999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       360 ~E~fgPvl~v~~~~~~~eai~  380 (456)
T cd07145         360 EEVFGPVLPIAKVKDDEEAVE  380 (456)
T ss_pred             CCCCCceEEEEEECCHHHHHH
Confidence            8    3   667777777874

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=3e-41  Score=281.59  Aligned_cols=167  Identities=25%  Similarity=0.395  Sum_probs=153.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       ++++||+++|||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       198 v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f  277 (455)
T cd07120         198 VDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEV  277 (455)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCceEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT--IGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|+++.++|+++++||.....  .+|+|++|||+.+++++|++
T Consensus       278 ~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i  357 (455)
T cd07120         278 RDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADI  357 (455)
T ss_pred             HHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChh
Confidence            9999999999999999999999999999999999999999999999999997754321  25899999999999999999


Q ss_pred             eee----e---eeEecCcccccC
Q psy7043         152 YRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~e----p---v~~v~~~~~ai~  167 (167)
                      ++|    |   |+.+++++|||+
T Consensus       358 ~~~E~FgPvl~v~~~~~~deai~  380 (455)
T cd07120         358 VQEEIFGPVLTLETFDDEAEAVA  380 (455)
T ss_pred             hhCcCcCceEEEeecCCHHHHHH
Confidence            999    3   556677777763

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=3.4e-41  Score=282.93  Aligned_cols=166  Identities=27%  Similarity=0.417  Sum_probs=154.5

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |.+|.||||+.+|       + .+++|++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++
T Consensus       224 vd~V~fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~  303 (481)
T cd07143         224 IDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDK  303 (481)
T ss_pred             CCEEEEECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHH
Confidence            5789999999998       2 3789999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|.+++++|||++++.+++++.++|++++.+|+++++||..... .|+|++|||+.+++++|+++
T Consensus       304 f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~  382 (481)
T cd07143         304 FVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGN-EGYFIEPTIFTDVTEDMKIV  382 (481)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCC-CceEEeeEEEecCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999987543 58999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       383 ~eE~FgPvl~v~~~~~~~eai~  404 (481)
T cd07143         383 KEEIFGPVVAVIKFKTEEEAIK  404 (481)
T ss_pred             hcCCcCCeEEEEeeCCHHHHHH
Confidence            99    3   666777777774

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=3.1e-41  Score=280.75  Aligned_cols=163  Identities=31%  Similarity=0.519  Sum_probs=153.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       +++++|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       190 v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f  269 (443)
T cd07152         190 VAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAY  269 (443)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++.+||++++.+++++.++|+++..+|+++++||..    .|+|++|||+.+++++|++++
T Consensus       270 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~----~g~~~~Ptvl~~~~~~~~~~~  345 (443)
T cd07152         270 TAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY----DGLFYRPTVLSGVKPGMPAFD  345 (443)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc----CCEEEcCEEEecCCCCChhhh
Confidence            9999999999999999999999999999999999999999999999999999975    389999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+.+++|||+
T Consensus       346 eE~FgPvl~v~~~~~~~eai~  366 (443)
T cd07152         346 EEIFGPVAPVTVFDSDEEAVA  366 (443)
T ss_pred             ccccCCeEEEEeeCCHHHHHH
Confidence            9    3   666677777763

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=2.7e-41  Score=282.00  Aligned_cols=167  Identities=26%  Similarity=0.428  Sum_probs=154.4

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       200 v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  279 (456)
T cd07110         200 IDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAF  279 (456)
T ss_pred             CCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHH
Confidence            5689999999987       578899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||..+.. ..|+|++|||+.+++++|+++
T Consensus       280 ~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~  359 (456)
T cd07110         280 LERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIW  359 (456)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHh
Confidence            9999999999999999999999999999999999999999999999999999976431 258999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      ++    |   |+.++++++||+
T Consensus       360 ~~E~fgPvl~v~~~~~~~eai~  381 (456)
T cd07110         360 REEIFGPVLCVRSFATEDEAIA  381 (456)
T ss_pred             hCCCcCCeEEEEecCCHHHHHH
Confidence            98    3   666677777763

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=3.3e-41  Score=282.47  Aligned_cols=163  Identities=26%  Similarity=0.404  Sum_probs=151.6

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      |++|.||||+++|     ...++|++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|++
T Consensus       219 v~~v~fTGs~~~g~~i~~~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~  298 (472)
T TIGR03250       219 VDLVTFTGGVAIGKYIAARAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTE  298 (472)
T ss_pred             CCEEEEECcHHHHHHHHHHhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHH
Confidence            5789999999998     24578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..    .|+|++|||+.+++++|++++| 
T Consensus       299 ~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~----~g~~~~PTvl~~v~~~~~i~~eE  374 (472)
T TIGR03250       299 LLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR----DGALYAPTVLDRVDPSMTLVREE  374 (472)
T ss_pred             HHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc----CCEEEcCEEEeCCCCCChHHhCC
Confidence            99999999999999999999999999999999999999999999999999865    3899999999999999999988 


Q ss_pred             ---e---eeEecCcccccC
Q psy7043         155 ---P---CRLVDTIPTYIR  167 (167)
Q Consensus       155 ---p---v~~v~~~~~ai~  167 (167)
                         |   |+.+++++|||+
T Consensus       375 ~FGPvl~v~~~~~~~eai~  393 (472)
T TIGR03250       375 TFGPVSPVIRFCDIDDAIR  393 (472)
T ss_pred             CcCCeEEEEEeCCHHHHHH
Confidence               4   555666677663

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=3.8e-41  Score=282.11  Aligned_cols=167  Identities=24%  Similarity=0.399  Sum_probs=155.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++++|
T Consensus       216 i~~v~ftGs~~~g~~v~~~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f  295 (471)
T cd07139         216 VDKVSFTGSTAAGRRIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEV  295 (471)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|+++..+|+++++||..+.. ..++|++|||+.+++++|+++
T Consensus       296 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~  375 (471)
T cd07139         296 VEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIA  375 (471)
T ss_pred             HHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHH
Confidence            9999999999999999999999999999999999999999999999999999976432 258999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       376 ~eE~FgPvl~v~~~~~~~eai~  397 (471)
T cd07139         376 QEEIFGPVLSVIPYDDEDDAVR  397 (471)
T ss_pred             hCccCCCeEEEeecCCHHHHHH
Confidence            99    3   667777777763

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=4.3e-41  Score=280.91  Aligned_cols=167  Identities=28%  Similarity=0.439  Sum_probs=154.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       195 v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  274 (457)
T cd07090         195 VAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEF  274 (457)
T ss_pred             CCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHH
Confidence            5789999999988       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC----CCCceEeeEEEecCCCCC
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT----IGELYYEPTLITDITPEM  149 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~----~~g~~~~Ptvl~~~~~~~  149 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||.....    .+|+|++|||+.+++++|
T Consensus       275 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~  354 (457)
T cd07090         275 TERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDM  354 (457)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCC
Confidence            9999999999999999999999999999999999999999999999999999976421    258999999999999999


Q ss_pred             ceeee----e---eeEecCcccccC
Q psy7043         150 DCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       150 ~i~~e----p---v~~v~~~~~ai~  167 (167)
                      ++++|    |   |+.+++.+|||+
T Consensus       355 ~~~~~E~FgPvl~v~~~~~~deai~  379 (457)
T cd07090         355 TIVREEIFGPVMSILPFDTEEEVIR  379 (457)
T ss_pred             hHHhCCCCCCeEEEEEECCHHHHHH
Confidence            99987    3   667788888874

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=4.5e-41  Score=281.42  Aligned_cols=167  Identities=25%  Similarity=0.415  Sum_probs=155.5

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       ++++||++||||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       213 v~~V~fTGs~~~g~~v~~~a~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  292 (467)
T TIGR01804       213 VAKVSFTGGVPTGKKIMAAAADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKF  292 (467)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHH
Confidence            5789999999987       578899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|+++..+|+++++||.....   .+|+|++|||+.+++++|+
T Consensus       293 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~  372 (467)
T TIGR01804       293 EARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMT  372 (467)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCCh
Confidence            9999999999999999999999999999999999999999999999999999976432   2489999999999999999


Q ss_pred             eeee-------eeeEecCcccccC
Q psy7043         151 CYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e-------pv~~v~~~~~ai~  167 (167)
                      +++|       +|+.+++++|||+
T Consensus       373 ~~~eE~FgPvl~v~~~~~~deai~  396 (467)
T TIGR01804       373 IVREEIFGPVMTVLTFSSEDEVIA  396 (467)
T ss_pred             HHhCCCCCceEEEEecCCHHHHHH
Confidence            9997       3777788888774

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=4.1e-41  Score=281.03  Aligned_cols=167  Identities=26%  Similarity=0.415  Sum_probs=153.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHh-hhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALAS-KFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~-~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      +++|.||||+.+|       +++++|+++|+|||||+||++|+|++.|++.++++ +|.|+||.|++++|+|||++++++
T Consensus       196 vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~  275 (457)
T cd07108         196 VDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDA  275 (457)
T ss_pred             cCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHH
Confidence            5789999999998       57899999999999999999999999999999999 599999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHH-CCCEEEeCCccCCC---CCCceEeeEEEecCCCC
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIK-KGAKVLLGGKPNPT---IGELYYEPTLITDITPE  148 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~  148 (167)
                      |+++|+++++++++|+|.++++++||++++.+++++.++++++++ +|+++++||..+..   .+|+|++|||+.+++++
T Consensus       276 f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~  355 (457)
T cd07108         276 FLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNE  355 (457)
T ss_pred             HHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCC
Confidence            999999999999999999999999999999999999999999998 99999999976421   25899999999999999


Q ss_pred             Cceeee----e---eeEecCcccccC
Q psy7043         149 MDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       149 ~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      |++++|    |   |+.+++++|||+
T Consensus       356 ~~~~~eE~FgPvl~v~~~~~~~eai~  381 (457)
T cd07108         356 WRLAREEIFGPVLCAIPWKDEDEVIA  381 (457)
T ss_pred             ChhhhcCCCCceEEeecCCCHHHHHH
Confidence            999999    3   556677777763

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=4.4e-41  Score=281.42  Aligned_cols=167  Identities=26%  Similarity=0.431  Sum_probs=154.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +.+++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       210 v~~v~fTGs~~~g~~i~~~aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  289 (466)
T cd07138         210 VDMVSFTGSTRAGKRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEA  289 (466)
T ss_pred             CCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHH
Confidence            5789999999988       477999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCceEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT--IGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.....  ..|+|++|||+.+++++|++
T Consensus       290 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i  369 (466)
T cd07138         290 EEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTI  369 (466)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChH
Confidence            9999999999999999999999999999999999999999999999999999864321  25899999999999999999


Q ss_pred             eee----e---eeEecCcccccC
Q psy7043         152 YRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~e----p---v~~v~~~~~ai~  167 (167)
                      ++|    |   |+.+++++|||+
T Consensus       370 ~~eE~fgPvl~v~~~~~~~eai~  392 (466)
T cd07138         370 AREEIFGPVLSIIPYDDEDEAIA  392 (466)
T ss_pred             HhCCCCCceEEEeccCCHHHHHH
Confidence            999    3   666677777763

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=4.9e-41  Score=282.29  Aligned_cols=167  Identities=28%  Similarity=0.438  Sum_probs=153.4

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |.+|.||||+.+|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|
T Consensus       224 vd~V~fTGS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f  303 (484)
T cd07144         224 VDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKF  303 (484)
T ss_pred             cCEEEEECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHH
Confidence            5689999999988       468999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHh-hccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKL-LVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT--IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~-~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|++++++ +++|+|++++++|||+++..+++++.++|++++++|+++++||.....  ..|+|++|||+.+++++|+
T Consensus       304 ~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~  383 (484)
T cd07144         304 VEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMR  383 (484)
T ss_pred             HHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCc
Confidence            9999999985 899999999999999999999999999999999999999999976431  2589999999999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.+++++|||+
T Consensus       384 ~~~eE~FgPvl~v~~~~~~~eai~  407 (484)
T cd07144         384 IVKEEIFGPVVVISKFKTYEEAIK  407 (484)
T ss_pred             hhhCCCCCceEEEeccCCHHHHHH
Confidence            9999    3   666667777763

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=6.7e-41  Score=279.21  Aligned_cols=165  Identities=28%  Similarity=0.460  Sum_probs=154.5

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       197 v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f  276 (450)
T cd07092         197 VRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEF  276 (450)
T ss_pred             CCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHH
Confidence            5789999999988       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|+++. +|+++++||...+. .|+|++|||+.+++++|++++
T Consensus       277 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~  354 (450)
T cd07092         277 VAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEG-PGYFYEPTVVAGVAQDDEIVQ  354 (450)
T ss_pred             HHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCC-CccEEeeEEEEcCCCCChHHh
Confidence            9999999999999999999999999999999999999999998 99999999976543 589999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       355 ~E~fgPvl~v~~~~~~deai~  375 (450)
T cd07092         355 EEIFGPVVTVQPFDDEDEAIE  375 (450)
T ss_pred             CCCcCceEEEEEECCHHHHHH
Confidence            9       3777788888874

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=5.3e-41  Score=282.99  Aligned_cols=166  Identities=22%  Similarity=0.342  Sum_probs=150.5

Q ss_pred             CceEEeecChhhh---------ccCCCceeEeCCCCCeeeEeCCCC-----HHHHHHHHHHhhhhhcCCceecCcEEEEe
Q psy7043           1 MRLFGLKNSFPVT---------QKTQPRPKVMPREASLNMVFESAN-----IDLAIQGALASKFRNCGQTCISANRFLIH   66 (167)
Q Consensus         1 ~~~v~ftGs~~~g---------~~~~~~v~lElgGknp~iV~~dad-----~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~   66 (167)
                      +++|.||||+++|         +++++|++||||||||+||++|||     ++.+++.+++++|.|+||+|++++|+|||
T Consensus       222 ~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~  301 (513)
T cd07128         222 QDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVP  301 (513)
T ss_pred             CCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEe
Confidence            4689999999998         168999999999999999999999     99999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC------CCCCceEeeE
Q psy7043          67 EKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP------TIGELYYEPT  140 (167)
Q Consensus        67 ~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~------~~~g~~~~Pt  140 (167)
                      +++|++|+++|+++++++++|+|+++++++||++++.+++++.++|++|+++ +++++||....      ...|+|++||
T Consensus       302 ~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PT  380 (513)
T cd07128         302 EARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPT  380 (513)
T ss_pred             hHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCE
Confidence            9999999999999999999999999999999999999999999999999988 99999996521      1258999999


Q ss_pred             EEecCCCC--Cceeee----e---eeEecCcccccC
Q psy7043         141 LITDITPE--MDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       141 vl~~~~~~--~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      |+.+++++  |++++|    |   |+.+++++|+|+
T Consensus       381 vl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~  416 (513)
T cd07128         381 LLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIE  416 (513)
T ss_pred             EEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHH
Confidence            99998874  899987    4   566677777763

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=7.9e-41  Score=280.65  Aligned_cols=167  Identities=34%  Similarity=0.538  Sum_probs=154.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++++|
T Consensus       215 vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f  294 (478)
T cd07131         215 VDVVSFTGSTEVGERIGETCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEF  294 (478)
T ss_pred             CCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHH
Confidence            5789999999988       468999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++|+.+|+++++||.....   .+|+|++|||+.+++++|+
T Consensus       295 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~  374 (478)
T cd07131         295 LKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMR  374 (478)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCCh
Confidence            9999999999999999999999999999999999999999999999999999976431   2589999999999999999


Q ss_pred             eeee-------eeeEecCcccccC
Q psy7043         151 CYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e-------pv~~v~~~~~ai~  167 (167)
                      +++|       +|+.+++++|||+
T Consensus       375 ~~~~E~FgPvl~v~~~~~~~eai~  398 (478)
T cd07131         375 IAQEEIFGPVVALIEVSSLEEAIE  398 (478)
T ss_pred             HhhCCCcCCeEEEEEeCCHHHHHH
Confidence            9998       3667777778774

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=6.2e-41  Score=279.47  Aligned_cols=163  Identities=33%  Similarity=0.551  Sum_probs=153.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       199 v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f  278 (451)
T cd07150         199 VRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEF  278 (451)
T ss_pred             CCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHH
Confidence            5789999999987       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..    +|+|++|||+.+++++|++++
T Consensus       279 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~----~g~~~~Ptvl~~~~~~~~~~~  354 (451)
T cd07150         279 VKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY----DGNFYQPTVLTDVTPDMRIFR  354 (451)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc----CCcEEcCEEEeCCCCCCHHHh
Confidence            9999999999999999999999999999999999999999999999999999865    389999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       355 ~E~fgPvl~v~~~~~~~eai~  375 (451)
T cd07150         355 EETFGPVTSVIPAKDAEEALE  375 (451)
T ss_pred             CCCcCceEEEEEeCCHHHHHH
Confidence            9    3   666777777874

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=1.1e-40  Score=279.58  Aligned_cols=166  Identities=26%  Similarity=0.437  Sum_probs=153.7

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       +++++|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       226 v~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f  305 (480)
T cd07111         226 VDKVAFTGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEEL  305 (480)
T ss_pred             cCEEEEECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHH
Confidence            5789999999998       478899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++.+|++++.||...+. .|+|++|||+.+++++|++++
T Consensus       306 ~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~  384 (480)
T cd07111         306 IRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPS-KGPFYPPTLFTNVPPASRIAQ  384 (480)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCeEEeeEEEecCCCCChhhc
Confidence            9999999999999999999999999999999999999999999999999998865332 589999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       385 eE~FgPvl~v~~~~~~deai~  405 (480)
T cd07111         385 EEIFGPVLVVLTFRTAKEAVA  405 (480)
T ss_pred             CCCCCCeeEeecCCCHHHHHH
Confidence            8    4   555677777763

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=9.9e-41  Score=278.71  Aligned_cols=167  Identities=29%  Similarity=0.488  Sum_probs=154.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||..+|       +++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       199 i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f  278 (457)
T cd07114         199 VAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEF  278 (457)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHH
Confidence            5689999999998       577999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.....   ..|+|++|||+.+++++++
T Consensus       279 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~  358 (457)
T cd07114         279 VERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMR  358 (457)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCCh
Confidence            9999999999999999999999999999999999999999999999999999976431   2489999999999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.++++||||+
T Consensus       359 ~~~~E~fgPvl~v~~~~~~deai~  382 (457)
T cd07114         359 IAQEEVFGPVLSVIPFDDEEEAIA  382 (457)
T ss_pred             hhhcCCcCceEEEeccCCHHHHHH
Confidence            9998    3   666777777763

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=1.3e-40  Score=279.89  Aligned_cols=165  Identities=21%  Similarity=0.236  Sum_probs=150.1

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccH-H
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY-D   71 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-~   71 (167)
                      |++|+||||+++|       + ...++++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||+++| +
T Consensus       213 v~~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d  292 (487)
T PRK09457        213 IDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGD  292 (487)
T ss_pred             cCEEEEECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHH
Confidence            5789999999987       2 34578899999999999999999999999999999999999999999999999998 9


Q ss_pred             HHHHHHHHHHHhhccCCCC-CCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCc
Q psy7043          72 EFISKFSEKIKLLVVGDGA-VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD  150 (167)
Q Consensus        72 ~f~~~l~~~~~~~~~g~~~-~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +|+++|+++++++++|+|+ ++++++||+++..+++++.+++++++++|+++++||...+. +|+|++|||+ +++++|+
T Consensus       293 ~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~PTvl-~v~~~~~  370 (487)
T PRK09457        293 AFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQA-GTGLLTPGII-DVTGVAE  370 (487)
T ss_pred             HHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCC-CCeeEecEEe-ccCCCCh
Confidence            9999999999999999996 78899999999999999999999999999999998865433 5899999999 7999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.++++||||+
T Consensus       371 i~~eE~FGPVl~V~~~~~~deai~  394 (487)
T PRK09457        371 LPDEEYFGPLLQVVRYDDFDEAIR  394 (487)
T ss_pred             HHhCCCcCCeEEEEEeCCHHHHHH
Confidence            9998    3   666777777774

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=1.5e-40  Score=277.22  Aligned_cols=167  Identities=26%  Similarity=0.380  Sum_probs=154.4

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++++|||++++++|
T Consensus       195 v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f  274 (452)
T cd07102         195 IDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAF  274 (452)
T ss_pred             CCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC--CCCCceEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP--TIGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||....  ...|+|++|||+.+++++|++
T Consensus       275 ~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i  354 (452)
T cd07102         275 VEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRV  354 (452)
T ss_pred             HHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChh
Confidence            999999999999999999999999999999999999999999999999999987532  125899999999999999999


Q ss_pred             eee----e---eeEecCcccccC
Q psy7043         152 YRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~e----p---v~~v~~~~~ai~  167 (167)
                      +++    |   |+.+++++|||+
T Consensus       355 ~~~E~fgPvl~v~~~~~~~eai~  377 (452)
T cd07102         355 MREETFGPVVGIMKVKSDAEAIA  377 (452)
T ss_pred             hhcCCcCCeEEEEEeCCHHHHHH
Confidence            998    3   666677777774

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=1.6e-40  Score=275.56  Aligned_cols=164  Identities=23%  Similarity=0.276  Sum_probs=151.0

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecc-cHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEK-RYD   71 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~-i~~   71 (167)
                      |++|.||||+++|       + +..++++||+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++ +++
T Consensus       176 v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d  255 (431)
T cd07095         176 IDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGD  255 (431)
T ss_pred             CCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHH
Confidence            5789999999988       2 346999999999999999999999999999999999999999999999999999 999


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCce
Q psy7043          72 EFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        72 ~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +|+++|+++++++++|+|.++++.+||++++.+++++.+++++++.+|+++++||...+. +|+|++|||+ +++++|++
T Consensus       256 ~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~-~g~~~~Ptv~-~v~~~~~i  333 (431)
T cd07095         256 AFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVA-GTAFLSPGII-DVTDAADV  333 (431)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCC-CCeEEcCEEE-ecCCCChH
Confidence            999999999999999999999999999999999999999999999999999999875443 5899999999 69999999


Q ss_pred             eee----e---eeEecCccccc
Q psy7043         152 YRF----P---CRLVDTIPTYI  166 (167)
Q Consensus       152 ~~e----p---v~~v~~~~~ai  166 (167)
                      ++|    |   |+.+++++|||
T Consensus       334 ~~eE~FgPvl~v~~~~~~~eai  355 (431)
T cd07095         334 PDEEIFGPLLQVYRYDDFDEAI  355 (431)
T ss_pred             HhCCCcCCeEEEEeeCCHHHHH
Confidence            998    3   66667777776

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=7.4e-41  Score=290.14  Aligned_cols=166  Identities=19%  Similarity=0.272  Sum_probs=150.5

Q ss_pred             CceEEeecChhhh---------ccCCCceeEeCCCCCeeeEeCCCC-----HHHHHHHHHHhhhhhcCCceecCcEEEEe
Q psy7043           1 MRLFGLKNSFPVT---------QKTQPRPKVMPREASLNMVFESAN-----IDLAIQGALASKFRNCGQTCISANRFLIH   66 (167)
Q Consensus         1 ~~~v~ftGs~~~g---------~~~~~~v~lElgGknp~iV~~dad-----~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~   66 (167)
                      +++|+||||+++|         +++++|++||||||||+||++|||     ++.+++.+++++|.|+||.|++++|+|||
T Consensus       226 i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~  305 (675)
T PRK11563        226 QDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVP  305 (675)
T ss_pred             CCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEee
Confidence            5789999999998         278999999999999999999995     99999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-C-----CCCCceEeeE
Q psy7043          67 EKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPN-P-----TIGELYYEPT  140 (167)
Q Consensus        67 ~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~-~-----~~~g~~~~Pt  140 (167)
                      +++|++|+++|+++++++++|+|+++++++||++++.+++++.++|++|+++ +++++||... .     ..+|+|++||
T Consensus       306 ~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PT  384 (675)
T PRK11563        306 RALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPT  384 (675)
T ss_pred             HHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCE
Confidence            9999999999999999999999999999999999999999999999999998 9999999532 1     1258999999


Q ss_pred             EEecCCC--CCceeee----e---eeEecCcccccC
Q psy7043         141 LITDITP--EMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       141 vl~~~~~--~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      |+.++++  ++++++|    |   |+.+++++|||+
T Consensus       385 vl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~  420 (675)
T PRK11563        385 LLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIE  420 (675)
T ss_pred             EEeccCchhhhhHhhccccCCceEEEecCCHHHHHH
Confidence            9999998  5789997    4   666677777763

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=1.6e-40  Score=275.58  Aligned_cols=163  Identities=18%  Similarity=0.276  Sum_probs=151.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhh-hhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKF-RNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+.+|       +++++|+++|||||||+||++|||++.+++.+++++| .|+||.|++++|+|||++++++
T Consensus       178 i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~  257 (432)
T cd07137         178 WDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPT  257 (432)
T ss_pred             CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHH
Confidence            5789999999998       5789999999999999999999999999999999999 5999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|++++++++.|+| +.++++||++++.+++++.++|+++.. |+++++||..+.  +|+|++|||+.+++++|+++
T Consensus       258 f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~~--~g~~~~Ptvl~~~~~~~~~~  333 (432)
T cd07137         258 LIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERDE--KNLYIEPTILLDPPLDSSIM  333 (432)
T ss_pred             HHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcCC--CCCEEeeEEEecCCCcchhh
Confidence            99999999999999999 468999999999999999999999998 899999987642  58999999999999999999


Q ss_pred             eee-------eeEecCcccccC
Q psy7043         153 RFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~ep-------v~~v~~~~~ai~  167 (167)
                      +||       |+.++++||||+
T Consensus       334 ~eE~FgPvl~v~~~~~~deai~  355 (432)
T cd07137         334 TEEIFGPLLPIITVKKIEESIE  355 (432)
T ss_pred             hcccccCceEEEEeCCHHHHHH
Confidence            993       778888888874

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=1.5e-40  Score=280.76  Aligned_cols=165  Identities=24%  Similarity=0.371  Sum_probs=152.1

Q ss_pred             CceEEeecChhhh-------c------cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------Q------KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~------~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|.||||+++|       +      ++++|+++|||||||+||++|||++.+++.+++++|.|+||.|++++|+|||+
T Consensus       247 v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~  326 (511)
T TIGR01237       247 THLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLS  326 (511)
T ss_pred             CCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEeh
Confidence            5789999999998       2      48899999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      +++++|+++|+++++++++|+|.++++++||++++.+++++.+++++++++| ++++||..... .|+|++|||+.++++
T Consensus       327 ~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~-~g~~~~Ptvl~~~~~  404 (511)
T TIGR01237       327 PVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPS-EGYFIGPTIFKDVDR  404 (511)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCC-CCeEEcCEEEeCCCC
Confidence            9999999999999999999999999999999999999999999999999888 78888865432 589999999999999


Q ss_pred             CCceeee----e---eeEecCcccccC
Q psy7043         148 EMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       148 ~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      +|++++|    |   |+.+++++|||+
T Consensus       405 ~~~i~~eE~FgPVl~v~~~~~~deai~  431 (511)
T TIGR01237       405 HARLAQEEIFGPVVAIIRAADFDEALE  431 (511)
T ss_pred             CChHhhCCCcCCeEEEEeeCCHHHHHH
Confidence            9999998    3   666777777763

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=1.8e-40  Score=276.95  Aligned_cols=166  Identities=26%  Similarity=0.442  Sum_probs=153.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++++|
T Consensus       197 v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f  276 (454)
T cd07109         197 VDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEV  276 (454)
T ss_pred             CCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHH
Confidence            5789999999987       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCceEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT--IGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +++|+++++++++|+|.+ ++++||++++.+++++.++|++++.+|+++++||.....  ..|+|++|||+.+++++|++
T Consensus       277 ~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~  355 (454)
T cd07109         277 LERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRL  355 (454)
T ss_pred             HHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChh
Confidence            999999999999999976 689999999999999999999999999999999875421  25899999999999999999


Q ss_pred             eeee-------eeEecCcccccC
Q psy7043         152 YRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~ep-------v~~v~~~~~ai~  167 (167)
                      ++||       |+.++++||||+
T Consensus       356 ~~eE~fgPvl~v~~~~~~deAi~  378 (454)
T cd07109         356 AQEEIFGPVLAVMPFDDEAEAIA  378 (454)
T ss_pred             hhCCCCCceEEEEecCCHHHHHH
Confidence            9993       677788888774

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=2.4e-40  Score=276.96  Aligned_cols=167  Identities=26%  Similarity=0.477  Sum_probs=154.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       203 v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  282 (465)
T cd07098         203 IDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKL  282 (465)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.+++++|||++++.+++++.+++++++.+|+++++||.....   ++|+|++|||+.+++++|+
T Consensus       283 ~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~  362 (465)
T cd07098         283 LEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMK  362 (465)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCH
Confidence            9999999999999999999999999999999999999999999999999999865321   2589999999999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.+++++|||+
T Consensus       363 ~~~~E~fgPvl~v~~~~~~~eai~  386 (465)
T cd07098         363 IAQEEVFGPVMVVMKASDDEEAVE  386 (465)
T ss_pred             HHhCCCcCCeEEEEEeCCHHHHHH
Confidence            9988    3   677778888763

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=2.3e-40  Score=276.05  Aligned_cols=166  Identities=42%  Similarity=0.647  Sum_probs=155.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|++||+|||||+||++|+|++.|++.+++++|.|+||.|++++++|||++++++|
T Consensus       197 vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f  276 (451)
T cd07103         197 VRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEF  276 (451)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHH
Confidence            5789999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...+. +|+|++|||+.++++++++++
T Consensus       277 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~-~g~~~~Ptil~~~~~~~~~~~  355 (451)
T cd07103         277 VEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGL-GGYFYEPTVLTDVTDDMLIMN  355 (451)
T ss_pred             HHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCcEECCEEeeCCCCcCHHHh
Confidence            9999999999999999999999999999999999999999999999999999976542 589999999999999999999


Q ss_pred             ee-------eeEecCcccccC
Q psy7043         154 FP-------CRLVDTIPTYIR  167 (167)
Q Consensus       154 ep-------v~~v~~~~~ai~  167 (167)
                      +|       |+.+++++|||+
T Consensus       356 ~E~fgPvl~v~~~~~~~eai~  376 (451)
T cd07103         356 EETFGPVAPIIPFDTEDEVIA  376 (451)
T ss_pred             CCCCCceEEEEEECCHHHHHH
Confidence            93       777778888764

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=2.3e-40  Score=276.78  Aligned_cols=167  Identities=27%  Similarity=0.404  Sum_probs=154.4

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCC-CHHHHHHHHHHhhhhhcCCceecCcEEEEecccHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESA-NIDLAIQGALASKFRNCGQTCISANRFLIHEKRYD   71 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~da-d~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~   71 (167)
                      |++|.||||+.+|       + .++||+++|+|||||+||++|+ |++.+++.+++++|.|+||.|++++++|||+++++
T Consensus       204 v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~  283 (462)
T cd07112         204 VDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKD  283 (462)
T ss_pred             cCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHH
Confidence            5789999999987       3 4899999999999999999999 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC-CCCCceEeeEEEecCCCCCc
Q psy7043          72 EFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP-TIGELYYEPTLITDITPEMD  150 (167)
Q Consensus        72 ~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-~~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||.... ...|+|++|||+.+++++|+
T Consensus       284 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~  363 (462)
T cd07112         284 EFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMR  363 (462)
T ss_pred             HHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCCh
Confidence            99999999999999999999999999999999999999999999999999999987542 12489999999999999999


Q ss_pred             eeeee-------eeEecCcccccC
Q psy7043         151 CYRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~ep-------v~~v~~~~~ai~  167 (167)
                      +++||       |+.+++++|||+
T Consensus       364 ~~~eE~fgPvl~v~~~~~~~eai~  387 (462)
T cd07112         364 IAREEIFGPVLSVITFDSEEEAVA  387 (462)
T ss_pred             HHhCCCCCceEEEEEeCCHHHHHH
Confidence            99993       777777778774

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=2e-40  Score=280.11  Aligned_cols=166  Identities=27%  Similarity=0.421  Sum_probs=152.7

Q ss_pred             CceEEeecChhhh-------cc------CCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------QK------TQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~------~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|.||||+.+|       ++      +++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||+
T Consensus       246 v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~  325 (512)
T cd07124         246 VRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHE  325 (512)
T ss_pred             CCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcH
Confidence            5789999999998       23      6999999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDIT  146 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~  146 (167)
                      +++++|+++|+++++++++|+|.++++++||++++.+++++.++|+++.+ |+++++||..++. ++|+|++|||+.+++
T Consensus       326 ~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~  404 (512)
T cd07124         326 SVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVP  404 (512)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCC
Confidence            99999999999999999999999999999999999999999999999988 8999999976531 258999999999999


Q ss_pred             CCCceeee----e---eeEecCcccccC
Q psy7043         147 PEMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       147 ~~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      ++|++++|    |   |+.+++++|||+
T Consensus       405 ~~~~i~~eE~FgPvl~v~~~~~~~eai~  432 (512)
T cd07124         405 PDHRLAQEEIFGPVLAVIKAKDFDEALE  432 (512)
T ss_pred             CCChHHhCCCcCCeEEEEecCCHHHHHH
Confidence            99999999    3   666677777763

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=2.8e-40  Score=275.75  Aligned_cols=163  Identities=30%  Similarity=0.485  Sum_probs=152.8

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      |++|.||||.++|     ..+++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|++
T Consensus       203 v~~V~fTGs~~~g~~v~~~a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~  282 (453)
T cd07094         203 VAMLSFTGSAAVGEALRANAGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIE  282 (453)
T ss_pred             CCEEEEECcHHHHHHHHHHcCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHH
Confidence            5789999999998     35789999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +|+++++++++|+|.++++.+||++++.+++++.+++++|+++|+++++||..    .++|++|||+.+++++|++++| 
T Consensus       283 ~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~----~g~~~~Ptvl~~~~~~~~i~~~E  358 (453)
T cd07094         283 AFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER----DGALFKPTVLEDVPRDTKLSTEE  358 (453)
T ss_pred             HHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC----CCeEEeCEEEeCCCCCChhhhCC
Confidence            99999999999999999999999999999999999999999999999999864    3889999999999999999988 


Q ss_pred             ---e---eeEecCcccccC
Q psy7043         155 ---P---CRLVDTIPTYIR  167 (167)
Q Consensus       155 ---p---v~~v~~~~~ai~  167 (167)
                         |   |+.+++++|||+
T Consensus       359 ~FgPvl~v~~~~~~~eai~  377 (453)
T cd07094         359 TFGPVVPIIRYDDFEEAIR  377 (453)
T ss_pred             CcCceEEEEEeCCHHHHHH
Confidence               3   667777778774

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=2.9e-40  Score=277.56  Aligned_cols=161  Identities=22%  Similarity=0.329  Sum_probs=147.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      +.+|.||||+.+|       +++++|++||||||||+||++|||++.|++.+++++|.|+||+|++++++|||++++++|
T Consensus       186 ~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f  265 (493)
T PTZ00381        186 FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKF  265 (493)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHH
Confidence            4689999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|++++++++ |++.++++++||+++..+++++.++++   .+|+++++||..+.  +++|++|||+.+++++|++|+
T Consensus       266 ~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~~~--~~~~i~Ptvl~~v~~~~~i~~  339 (493)
T PTZ00381        266 IEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEVDI--ENKYVAPTIIVNPDLDSPLMQ  339 (493)
T ss_pred             HHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCcCC--CCCeEeeEEEecCCCCChHHh
Confidence            999999999985 766678899999999999999999996   36899999997643  489999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       ||+.+++++|||+
T Consensus       340 eEiFGPVl~v~~~~~~deAi~  360 (493)
T PTZ00381        340 EEIFGPILPILTYENIDEVLE  360 (493)
T ss_pred             ccccCCeEEEEeeCCHHHHHH
Confidence            9       3777788888874

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=5.8e-40  Score=272.46  Aligned_cols=165  Identities=19%  Similarity=0.273  Sum_probs=151.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      +++|.||||+.+|       +++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       178 v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f  257 (434)
T cd07133         178 FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEF  257 (434)
T ss_pred             CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+  +.++++||++++.+++++.++|++++.+|+++++||..... .+|+|++|||+.+++++|+++
T Consensus       258 ~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~  335 (434)
T cd07133         258 VAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVM  335 (434)
T ss_pred             HHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCccc
Confidence            999999999998886  47789999999999999999999999999999998876431 258999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       336 ~eE~FgPvl~v~~~~~~~eai~  357 (434)
T cd07133         336 QEEIFGPILPILTYDSLDEAID  357 (434)
T ss_pred             ccccCCCeeEEEEeCCHHHHHH
Confidence            99    3   677777777774

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=4.1e-40  Score=274.56  Aligned_cols=163  Identities=27%  Similarity=0.442  Sum_probs=152.6

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      |++|.||||+.+|     ....+|++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|++
T Consensus       200 i~~V~fTGs~~~g~~i~~~a~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~  279 (451)
T cd07146         200 VDLVTFTGGVAVGKAIAATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVD  279 (451)
T ss_pred             CCEEEEECCHHHHHHHHHHhcCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHH
Confidence            5789999999998     23578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..    .|+|++|||+.+++++|++++| 
T Consensus       280 ~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~----~g~~~~Ptvl~~~~~~~~~~~eE  355 (451)
T cd07146         280 LLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR----QGALYAPTVLDHVPPDAELVTEE  355 (451)
T ss_pred             HHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc----CCEEEcCEEeecCCCCCHHHhCC
Confidence            99999999999999999999999999999999999999999999999999864    3899999999999999999999 


Q ss_pred             ------eeeEecCcccccC
Q psy7043         155 ------PCRLVDTIPTYIR  167 (167)
Q Consensus       155 ------pv~~v~~~~~ai~  167 (167)
                            +|+.+++++|||+
T Consensus       356 ~FgPvl~v~~~~~~~eai~  374 (451)
T cd07146         356 TFGPVAPVIRVKDLDEAIA  374 (451)
T ss_pred             CCCCeEEEEEeCCHHHHHH
Confidence                  3777788888874

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=5e-40  Score=277.05  Aligned_cols=164  Identities=22%  Similarity=0.415  Sum_probs=150.7

Q ss_pred             CceEEeecChhhh-------ccCC------CceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------QKTQ------PRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~------~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|.||||+++|       ++++      +|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||+
T Consensus       234 v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~  313 (500)
T cd07083         234 IRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQ  313 (500)
T ss_pred             cCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcH
Confidence            5789999999998       3444      99999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      +++++|+++|+++++++++|+|.++++++||++++.+++++.++++++..+| ++++||..++. .|+|++|||+.++++
T Consensus       314 ~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~-~g~~~~Ptvl~~~~~  391 (500)
T cd07083         314 GAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEG-EGYFVAPTVVEEVPP  391 (500)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCC-CCeEEccEEEeCCCC
Confidence            9999999999999999999999999999999999999999999999998877 89999976543 589999999999999


Q ss_pred             CCceeee----e---eeEec--Cccccc
Q psy7043         148 EMDCYRF----P---CRLVD--TIPTYI  166 (167)
Q Consensus       148 ~~~i~~e----p---v~~v~--~~~~ai  166 (167)
                      +|++++|    |   |+.++  +++|||
T Consensus       392 ~~~~~~eE~FgPvl~v~~~~d~~~~eai  419 (500)
T cd07083         392 KARIAQEEIFGPVLSVIRYKDDDFAEAL  419 (500)
T ss_pred             CChHhhCCCCCceEEEEEeCCCCHHHHH
Confidence            9999999    3   55666  667776

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=4.9e-40  Score=272.62  Aligned_cols=163  Identities=34%  Similarity=0.586  Sum_probs=153.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       179 i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f  258 (431)
T cd07104         179 VRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEF  258 (431)
T ss_pred             CCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHH
Confidence            5689999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|++++.++++|+|.++++.+||++++.+++++.+++++++++|+++++||..    +|+|++|||+.+++++|++++
T Consensus       259 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~----~g~~~~Ptvl~~~~~~~~~~~  334 (431)
T cd07104         259 VEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY----EGLFYQPTVLSDVTPDMPIFR  334 (431)
T ss_pred             HHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC----CCceECCEEeecCCCCChhhh
Confidence            9999999999999999999999999999999999999999999999999999865    389999999999999999998


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       335 eE~fgPvl~v~~~~~~~eai~  355 (431)
T cd07104         335 EEIFGPVAPVIPFDDDEEAVE  355 (431)
T ss_pred             CcCcCCeEEEEEECCHHHHHH
Confidence            8    3   667778888774

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=6.1e-40  Score=272.25  Aligned_cols=165  Identities=25%  Similarity=0.405  Sum_probs=152.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      +++|.||||+.+|       +++++|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++|+|
T Consensus       177 v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f  256 (433)
T cd07134         177 FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAF  256 (433)
T ss_pred             CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHHHHHH
Confidence            5789999999998       468899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCC-CCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDG-AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~-~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|++++++++.|+| .+.++++||++++.+++++.++|++++++|+++++||..+.  .|+|++|||+.+++++|+++
T Consensus       257 ~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~--~g~~~~Ptvl~~~~~~~~~~  334 (433)
T cd07134         257 VEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDA--AQRYIAPTVLTNVTPDMKIM  334 (433)
T ss_pred             HHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCC--CCCEEeeEEEeCCCCccHHH
Confidence            9999999999977776 88899999999999999999999999999999999997643  48999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       335 ~eE~FgPvl~v~~~~~~~eai~  356 (433)
T cd07134         335 QEEIFGPVLPIITYEDLDEVIE  356 (433)
T ss_pred             hccccCceEEEEEeCCHHHHHH
Confidence            99    3   666777777764

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=6.9e-40  Score=274.87  Aligned_cols=166  Identities=22%  Similarity=0.418  Sum_probs=153.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +.++||+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||+++ ++|
T Consensus       215 v~~V~ftGS~~~g~~v~~~a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f  293 (477)
T TIGR01722       215 VKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEW  293 (477)
T ss_pred             cCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHH
Confidence            5789999999998       46899999999999999999999999999999999999999999999999999999 999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.+++++|||++++.+++++.++|++|+++|+++++||.....   .+|+|++|||+.+++++|+
T Consensus       294 ~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~  373 (477)
T TIGR01722       294 VPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMK  373 (477)
T ss_pred             HHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCCh
Confidence            9999999999999999999999999999999999999999999999999999975311   2589999999999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.+++++|||+
T Consensus       374 ~~~eE~FgPvl~V~~~~~~~eai~  397 (477)
T TIGR01722       374 AYQEEIFGPVLCVLEADTLEEAIA  397 (477)
T ss_pred             hhhCCCCCCeEEEEEeCCHHHHHH
Confidence            9988    3   666666777763

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=6.6e-40  Score=273.42  Aligned_cols=163  Identities=29%  Similarity=0.508  Sum_probs=151.5

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      |++|.||||+.+|     ....+|+++|||||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|++
T Consensus       202 v~~v~fTGs~~~g~~v~~~a~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~  281 (452)
T cd07147         202 IKLLSFTGSPAVGWDLKARAGKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKS  281 (452)
T ss_pred             CCEEEEECCHHHHHHHHHHhCcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHH
Confidence            5789999999998     22357999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||..    .|+|++|||+.+++++|++++| 
T Consensus       282 ~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~----~g~~~~Ptvl~~~~~~~~~~~~E  357 (452)
T cd07147         282 RLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR----DGALLEPTILEDVPPDMEVNCEE  357 (452)
T ss_pred             HHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCc----CCEEEcCEEEeCCCCCChHHhCc
Confidence            99999999999999999999999999999999999999999999999999875    3889999999999999999988 


Q ss_pred             ---e---eeEecCcccccC
Q psy7043         155 ---P---CRLVDTIPTYIR  167 (167)
Q Consensus       155 ---p---v~~v~~~~~ai~  167 (167)
                         |   |+.++++||||+
T Consensus       358 ~fgPvl~v~~~~~~deai~  376 (452)
T cd07147         358 VFGPVVTVEPYDDFDEALA  376 (452)
T ss_pred             CcCCeEEEEEeCCHHHHHH
Confidence               3   667777788774

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=7.1e-40  Score=274.48  Aligned_cols=163  Identities=20%  Similarity=0.259  Sum_probs=149.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeC---CCCHHHHHHHHHHhhhh-hcCCceecCcEEEEeccc
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFE---SANIDLAIQGALASKFR-NCGQTCISANRFLIHEKR   69 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~---dad~~~aa~~i~~~~~~-~~GQ~C~a~~~v~v~~~i   69 (167)
                      |.+|+||||+++|       +++++|++||||||||+||++   |+|++.+++.+++++|. |+||.|++++|+|||+++
T Consensus       185 vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i  264 (484)
T PLN02203        185 WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERF  264 (484)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHH
Confidence            5689999999998       578999999999999999997   69999999999999996 899999999999999999


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCC
Q psy7043          70 YDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM  149 (167)
Q Consensus        70 ~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~  149 (167)
                      +++|+++|+++++++++|+|.+. ++|||++++.+++++.++|+++..+ +++++||..++  +|+|++|||+.+++++|
T Consensus       265 ~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~~~~--~g~~i~PTvl~~v~~d~  340 (484)
T PLN02203        265 APILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSIDE--KKLFIEPTILLNPPLDS  340 (484)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCCcCC--CCCEEeeEEEecCCCCC
Confidence            99999999999999999999885 6899999999999999999999876 78999987532  59999999999999999


Q ss_pred             ceeee-------eeeEecCcccccC
Q psy7043         150 DCYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       150 ~i~~e-------pv~~v~~~~~ai~  167 (167)
                      ++++|       +|+.+++++|||+
T Consensus       341 ~i~~eE~FGPVl~v~~~~~~~eai~  365 (484)
T PLN02203        341 DIMTEEIFGPLLPIITVKKIEDSIA  365 (484)
T ss_pred             HHHhcCccCCeEEEEeeCCHHHHHH
Confidence            99998       3777778888774

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-40  Score=276.41  Aligned_cols=164  Identities=26%  Similarity=0.413  Sum_probs=150.2

Q ss_pred             CceEEeecChhhh-------cc------CCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------QK------TQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~------~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|+||||+.+|       ++      ++||+++|||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||+
T Consensus       251 v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~  330 (514)
T PRK03137        251 TRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHE  330 (514)
T ss_pred             cCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeH
Confidence            5789999999998       22      6899999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      +++++|+++|+++++++++|+|.++. ++||++++.+++++.++|+++.++ +++++||..+.. .|+|++|||+.++++
T Consensus       331 ~v~d~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~-~g~~~~Ptvl~~v~~  407 (514)
T PRK03137        331 DVYDEVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDS-KGYFIQPTIFADVDP  407 (514)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCC-CceEEeeEEEeCCCC
Confidence            99999999999999999999999998 999999999999999999999887 699999976543 589999999999999


Q ss_pred             CCceeee----e---eeEecCcccccC
Q psy7043         148 EMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       148 ~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      +|++++|    |   |+.+++++|||+
T Consensus       408 ~~~~~~eE~FgPvl~v~~~~~~~eai~  434 (514)
T PRK03137        408 KARIMQEEIFGPVVAFIKAKDFDHALE  434 (514)
T ss_pred             CCHHHhCCCCCceEEEEecCCHHHHHH
Confidence            9999998    4   556666677763

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.2e-39  Score=273.56  Aligned_cols=165  Identities=24%  Similarity=0.346  Sum_probs=150.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCC------CCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFES------ANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~d------ad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|.||||+++|       +++++|++||||||||+||++|      +|++.|++.++++. +|+||.|++++|+|||+
T Consensus       215 v~~V~fTGS~~~G~~i~~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~  293 (479)
T cd07116         215 IAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQE  293 (479)
T ss_pred             cCEEEEECCHHHHHHHHHHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcH
Confidence            5789999999988       4789999999999999999998      69999999999865 59999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEec
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITD  144 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~  144 (167)
                      +++++|+++|+++++++++|+|+++++.+||++++.+++++.++|++++++|+++++||.....   .+|+|++|||+.+
T Consensus       294 ~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~  373 (479)
T cd07116         294 SIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKG  373 (479)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEcc
Confidence            9999999999999999999999999999999999999999999999999999999999976431   2589999999998


Q ss_pred             CCCCCceeee----e---eeEecCcccccC
Q psy7043         145 ITPEMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       145 ~~~~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      ++ +|++++|    |   |+.+++++|||+
T Consensus       374 ~~-~~~~~~eE~FGPVl~v~~~~~~~eai~  402 (479)
T cd07116         374 GN-KMRIFQEEIFGPVLAVTTFKDEEEALE  402 (479)
T ss_pred             CC-CChhhhcCCcCceEEEEEeCCHHHHHH
Confidence            74 9999999    3   677788888874

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1e-39  Score=274.80  Aligned_cols=161  Identities=20%  Similarity=0.293  Sum_probs=149.6

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      |++|.|||| .+|     ...++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|++
T Consensus       238 v~~V~ftGs-~~g~~v~~~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~  316 (496)
T PLN00412        238 VNCISFTGG-DTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVE  316 (496)
T ss_pred             cCEEEEeCh-HHHHHHHHHhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHH
Confidence            578999999 887     34589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +|+++++++++|+|.+ ++++||+++..+++++.++|++|+.+|++++.++..    .|+|++|||+.+++++|++++| 
T Consensus       317 ~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~----~g~~~~Ptvl~~v~~~~~i~~eE  391 (496)
T PLN00412        317 KVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR----EGNLIWPLLLDNVRPDMRIAWEE  391 (496)
T ss_pred             HHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC----CCeEEecEEEeCCCCCCHHHhCc
Confidence            9999999999999977 789999999999999999999999999999997753    4899999999999999999998 


Q ss_pred             ------eeeEecCcccccC
Q psy7043         155 ------PCRLVDTIPTYIR  167 (167)
Q Consensus       155 ------pv~~v~~~~~ai~  167 (167)
                            +|+.++++||||+
T Consensus       392 ~FgPvl~v~~~~~~deai~  410 (496)
T PLN00412        392 PFGPVLPVIRINSVEEGIH  410 (496)
T ss_pred             CCCCeEEEEEeCCHHHHHH
Confidence                  3778888888874

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1e-39  Score=275.69  Aligned_cols=165  Identities=20%  Similarity=0.298  Sum_probs=146.7

Q ss_pred             CceEEeecChhhh---------ccCCCceeEeCCCCCeeeEeCCCC-----HHHHHHHHHHhhhhhcCCceecCcEEEEe
Q psy7043           1 MRLFGLKNSFPVT---------QKTQPRPKVMPREASLNMVFESAN-----IDLAIQGALASKFRNCGQTCISANRFLIH   66 (167)
Q Consensus         1 ~~~v~ftGs~~~g---------~~~~~~v~lElgGknp~iV~~dad-----~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~   66 (167)
                      +++|+||||+++|         +++++|++||||||||+||++|+|     ++.+++.+++++|.|+||.|++++|+|||
T Consensus       226 v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~  305 (521)
T PRK11903        226 FDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVP  305 (521)
T ss_pred             CCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEe
Confidence            5789999999998         267899999999999999999999     59999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC-----CCCCceEeeEE
Q psy7043          67 EKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP-----TIGELYYEPTL  141 (167)
Q Consensus        67 ~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-----~~~g~~~~Ptv  141 (167)
                      +++|++|+++|+++++++++|+|+++++++||++++.+++++.++|+. ..+|+++++||....     ..+|+|++|||
T Consensus       306 ~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTv  384 (521)
T PRK11903        306 EALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTL  384 (521)
T ss_pred             hhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCCCCCCCCCCeEEcCEE
Confidence            999999999999999999999999999999999999999999999985 457999999996521     12489999999


Q ss_pred             EecCCC--CCceeee----e---eeEecCccccc
Q psy7043         142 ITDITP--EMDCYRF----P---CRLVDTIPTYI  166 (167)
Q Consensus       142 l~~~~~--~~~i~~e----p---v~~v~~~~~ai  166 (167)
                      +.++++  +|++++|    |   |+.+++.+|||
T Consensus       385 l~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai  418 (521)
T PRK11903        385 LGASDPDAATAVHDVEVFGPVATLLPYRDAAHAL  418 (521)
T ss_pred             EeccCCCccchHHhCcccCCeEEEEeeCCHHHHH
Confidence            987654  4688877    3   66667777775

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=1.6e-39  Score=271.22  Aligned_cols=167  Identities=30%  Similarity=0.455  Sum_probs=155.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||..+|       +++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       197 i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f  276 (455)
T cd07093         197 VDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEF  276 (455)
T ss_pred             ccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHH
Confidence            5789999999998       468999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.....   ..++|++|||+.+++++|+
T Consensus       277 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~  356 (455)
T cd07093         277 LERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSR  356 (455)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCCh
Confidence            9999999999999999999999999999999999999999999999999999976431   2489999999999999999


Q ss_pred             eeee-------eeeEecCcccccC
Q psy7043         151 CYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e-------pv~~v~~~~~ai~  167 (167)
                      +++|       +|+.+++++|||+
T Consensus       357 ~~~~E~fgPvl~v~~~~~~~eai~  380 (455)
T cd07093         357 VAQEEIFGPVVTVIPFDDEEEAIE  380 (455)
T ss_pred             HHhCCCCCceEEEEeeCCHHHHHH
Confidence            9998       3777788888764

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=1.2e-39  Score=270.72  Aligned_cols=161  Identities=21%  Similarity=0.352  Sum_probs=149.3

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +.+++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       185 vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  264 (436)
T cd07135         185 FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEF  264 (436)
T ss_pred             CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHH
Confidence            5789999999987       478899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+| ++++.+||+++..+++++.++++++   |+++++||...+  +|+|++|||+.+++++|++++
T Consensus       265 ~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~  338 (436)
T cd07135         265 VEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEMDE--ATRFIPPTIVSDVSWDDSLMS  338 (436)
T ss_pred             HHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCcCC--CCCEEccEEEecCCCccHHHh
Confidence            9999999999999999 8999999999999999999999987   889999997653  589999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      +    |   |+.++++||||+
T Consensus       339 ~E~FgPvl~v~~~~~~deai~  359 (436)
T cd07135         339 EELFGPVLPIIKVDDLDEAIK  359 (436)
T ss_pred             ccccCCceEEEecCCHHHHHH
Confidence            8    3   666777777763

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=3.2e-40  Score=275.99  Aligned_cols=166  Identities=31%  Similarity=0.496  Sum_probs=151.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       +++++|+++|+|||||+||++|||++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       206 v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f  285 (462)
T PF00171_consen  206 VDLVSFTGSTATGRAIAKAAAKNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEF  285 (462)
T ss_dssp             EEEEEEESEHHHHHHHHHHHHTTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHH
T ss_pred             cceeeecchhhhhhhhhhhcccccccccccccccceeeEecccccccccccccchhcccccccccccccccccccccchh
Confidence            4789999999998       478899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCc--cCCCCCCceEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK--PNPTIGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~--~~~~~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.++++++..+|+++++||.  ......|+|++|||+.+++++|++
T Consensus       286 ~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~  365 (462)
T PF00171_consen  286 VEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPI  365 (462)
T ss_dssp             HHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHH
T ss_pred             hhhhhhccccccccCCccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999999999999999999999999999999982  111136899999999999999999


Q ss_pred             eee----e---eeEecCccccc
Q psy7043         152 YRF----P---CRLVDTIPTYI  166 (167)
Q Consensus       152 ~~e----p---v~~v~~~~~ai  166 (167)
                      ++|    |   |+.+++++|+|
T Consensus       366 ~~~E~fgPvl~v~~~~~~~eai  387 (462)
T PF00171_consen  366 MQEEIFGPVLPVVPYDDLDEAI  387 (462)
T ss_dssp             HHSC-SSSEEEEEEESSHHHHH
T ss_pred             cccccccccceecccccchhhh
Confidence            988    3   66666777766

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=1.3e-39  Score=270.89  Aligned_cols=159  Identities=26%  Similarity=0.398  Sum_probs=146.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|+++|||||||+||++|+|+|.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       177 v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  256 (449)
T cd07136         177 FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKF  256 (449)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHHHH
Confidence            6799999999998       477999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|++++++++.|+|.+ ++++||++++.+++++.++|+++     ++++||..+.  +|+|++|||+.+++++|.+++
T Consensus       257 ~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~~--~g~~~~Ptvl~~v~~~~~~~~  328 (449)
T cd07136         257 IKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTDR--ETLYIEPTILDNVTWDDPVMQ  328 (449)
T ss_pred             HHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcCC--CCCEEeeEEEecCCCcChHHh
Confidence            999999999999999987 88999999999999999999863     7999997643  489999999999999999999


Q ss_pred             ee-------eeEecCcccccC
Q psy7043         154 FP-------CRLVDTIPTYIR  167 (167)
Q Consensus       154 ep-------v~~v~~~~~ai~  167 (167)
                      ||       |+.+++++|||+
T Consensus       329 eE~FGPVl~v~~~~~~~eai~  349 (449)
T cd07136         329 EEIFGPILPVLTYDTLDEAIE  349 (449)
T ss_pred             ccccCCeeEEEEeCCHHHHHH
Confidence            93       777788888874

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=2.6e-39  Score=271.76  Aligned_cols=165  Identities=22%  Similarity=0.241  Sum_probs=148.1

Q ss_pred             CceEEeecChhhh-------ccC-CCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccH-H
Q psy7043           1 MRLFGLKNSFPVT-------QKT-QPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY-D   71 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~-~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-~   71 (167)
                      |++|.||||+++|       +++ .++++||||||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++++ +
T Consensus       211 vd~V~fTGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d  290 (484)
T TIGR03240       211 IDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGD  290 (484)
T ss_pred             CCEEEEECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHH
Confidence            5789999999987       234 688999999999999999999999999999999999999999999999999985 9


Q ss_pred             HHHHHHHHHHHhhccCCC-CCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCc
Q psy7043          72 EFISKFSEKIKLLVVGDG-AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD  150 (167)
Q Consensus        72 ~f~~~l~~~~~~~~~g~~-~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +|+++|+++++++++|+| .++++++||+++..+++++.+++++++++|+++++||...+. +++|++|||+ +++++|+
T Consensus       291 ~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~-~~~~i~PTvl-~v~~~~~  368 (484)
T TIGR03240       291 AFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDP-GAALLTPGII-DVTGVAE  368 (484)
T ss_pred             HHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCEEEcCEEE-ccCCCCH
Confidence            999999999999999997 478889999999999999999999999999999998865433 5899999999 6999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.+++++|||+
T Consensus       369 i~~eE~FGPVl~v~~~~~~~eai~  392 (484)
T TIGR03240       369 LPDEEHFGPLLQVIRYDDFDEAIA  392 (484)
T ss_pred             HHhCCCcCCeEEEEEeCCHHHHHH
Confidence            9988    3   556666677763

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=2.5e-39  Score=268.62  Aligned_cols=162  Identities=31%  Similarity=0.492  Sum_probs=148.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       181 v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f  260 (432)
T cd07105         181 VRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEF  260 (432)
T ss_pred             CCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHH
Confidence            5789999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|     ++++||++++.+++++.++|++++.+|+++++||..+....++|++|||+.+++++|++++
T Consensus       261 ~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~  335 (432)
T cd07105         261 VEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYS  335 (432)
T ss_pred             HHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHh
Confidence            99999999999888     5789999999999999999999999999999999765322589999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       336 eE~fgPvl~v~~~~~~deai~  356 (432)
T cd07105         336 EESFGPVVSIIRVKDEEEAVR  356 (432)
T ss_pred             CCCcCCeEEEEeeCCHHHHHH
Confidence            8    3   666677777763

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-39  Score=272.39  Aligned_cols=164  Identities=22%  Similarity=0.322  Sum_probs=152.0

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCC-CHHHHHHHHHHhhhhhcCCceecCcEEEEecccHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESA-NIDLAIQGALASKFRNCGQTCISANRFLIHEKRYD   71 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~da-d~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~   71 (167)
                      |++|.||||+++|       + .+++|++||||||||+||++|+ |++.|++.+++++|.|+||.|++++|+|||+++++
T Consensus       237 vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d  316 (494)
T PRK09847        237 IDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIAD  316 (494)
T ss_pred             CCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHH
Confidence            5689999999988       2 5889999999999999999997 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCce
Q psy7043          72 EFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        72 ~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +|+++|+++++++++|+|.++++.+||++++.+++++.++|++|+++| ++++||....  .++|++|||+.+++++|++
T Consensus       317 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~~--~~~~~~Ptvl~~v~~~~~~  393 (494)
T PRK09847        317 EFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAG--LAAAIGPTIFVDVDPNASL  393 (494)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccCC--CCceEeeEEEeCCCCCChH
Confidence            999999999999999999999999999999999999999999999999 9999987643  4789999999999999999


Q ss_pred             eeee-------eeEecCcccccC
Q psy7043         152 YRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~ep-------v~~v~~~~~ai~  167 (167)
                      ++||       |+.+++++|||+
T Consensus       394 ~~eE~FgPvl~v~~~~~~~eai~  416 (494)
T PRK09847        394 SREEIFGPVLVVTRFTSEEQALQ  416 (494)
T ss_pred             HhCcCcCceEEEEecCCHHHHHH
Confidence            9993       667777778774

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=5.8e-39  Score=267.70  Aligned_cols=163  Identities=31%  Similarity=0.544  Sum_probs=152.1

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      +++|.||||+++|     ...++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|++
T Consensus       203 v~~V~ftGs~~~g~~i~~~a~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~  282 (453)
T cd07149         203 VRMISFTGSPAVGEAIARKAGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLE  282 (453)
T ss_pred             CCEEEEECCHHHHHHHHHHcCCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHH
Confidence            5789999999998     24478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..    .++|++|||+.+++++|++++| 
T Consensus       283 ~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~----~g~~~~Ptvl~~~~~~~~~~~~E  358 (453)
T cd07149         283 RFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR----DGAILEPTVLTDVPPDMKVVCEE  358 (453)
T ss_pred             HHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCC----CCeEEcCEEEeCCCCCCHHHhCC
Confidence            99999999999999999999999999999999999999999999999999865    3889999999999999999998 


Q ss_pred             ---e---eeEecCcccccC
Q psy7043         155 ---P---CRLVDTIPTYIR  167 (167)
Q Consensus       155 ---p---v~~v~~~~~ai~  167 (167)
                         |   |+.+++++|||+
T Consensus       359 ~fgPvl~v~~~~~~~eai~  377 (453)
T cd07149         359 VFAPVVSLNPFDTLDEAIA  377 (453)
T ss_pred             CCCceEEEEEeCCHHHHHH
Confidence               3   667778888874

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=1.3e-38  Score=264.95  Aligned_cols=159  Identities=24%  Similarity=0.355  Sum_probs=145.7

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       +++++|+++|||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       177 vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f  256 (443)
T cd07132         177 FDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKF  256 (443)
T ss_pred             CCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|++++++++.|++ ++++++||++++.+++++.+++++     +++++||..+.  +++|++|||+.+++++|++++
T Consensus       257 ~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~~--~~~~~~Ptvl~~v~~~~~~~~  328 (443)
T cd07132         257 VEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTDE--KERYIAPTVLTDVKPSDPVMQ  328 (443)
T ss_pred             HHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccCC--CCCEEeeEEEeCCCCCChHHh
Confidence            9999999999988877 788999999999999999999873     48999987643  489999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       329 eE~FgPvl~v~~~~~~~eai~  349 (443)
T cd07132         329 EEIFGPILPIVTVNNLDEAIE  349 (443)
T ss_pred             ccccCceeEEEEeCCHHHHHH
Confidence            9       3777788888774

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=2.2e-38  Score=267.97  Aligned_cols=163  Identities=17%  Similarity=0.156  Sum_probs=148.3

Q ss_pred             CceEEeecChhhh-------c---cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccH
Q psy7043           1 MRLFGLKNSFPVT-------Q---KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY   70 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~---~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~   70 (167)
                      |.+|.||||+.+|       +   +.++|+++|||||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++
T Consensus       247 vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~  326 (518)
T cd07125         247 IDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIA  326 (518)
T ss_pred             cCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhH
Confidence            5789999999998       2   23899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCc
Q psy7043          71 DEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD  150 (167)
Q Consensus        71 ~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~  150 (167)
                      ++|+++|++++.++++|+|++++++|||++++.+++++.++++++.. ++++++||..+.. +|+|++|||+.++  +|+
T Consensus       327 d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~-~g~~~~Ptvl~~v--~~~  402 (518)
T cd07125         327 ERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDG-NGYFVAPGIIEIV--GIF  402 (518)
T ss_pred             HHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCC-CCeEEccEEEeec--CCh
Confidence            99999999999999999999999999999999999999999999987 4689999876432 5899999999888  899


Q ss_pred             eeee----e---eeEec--CcccccC
Q psy7043         151 CYRF----P---CRLVD--TIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~--~~~~ai~  167 (167)
                      +++|    |   |+.++  ++||||+
T Consensus       403 i~~eE~FgPVl~v~~~~~~~~deAi~  428 (518)
T cd07125         403 DLTTEVFGPILHVIRFKAEDLDEAIE  428 (518)
T ss_pred             HhhCcccCCeEEEEEeCCCCHHHHHH
Confidence            9999    3   66677  7777763

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=5.1e-38  Score=263.36  Aligned_cols=164  Identities=29%  Similarity=0.420  Sum_probs=151.5

Q ss_pred             CceEEeecChhhhc-----cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVTQ-----KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g~-----~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      +++|.||||..+|.     ..++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|++
T Consensus       221 v~~V~ftGs~~~g~~i~~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~  300 (473)
T cd07082         221 IDVISFTGSTEVGNRLKKQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVE  300 (473)
T ss_pred             CCEEEEECcHHHHHHHHHHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHH
Confidence            57899999999982     1289999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +|.++++++++|+|.++++++||++++.+++++.++++++..+|+++++||...   .|+|++|||+.+++++|++++| 
T Consensus       301 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~---~g~~~~Ptvl~~~~~~~~~~~eE  377 (473)
T cd07082         301 LLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE---GGNLIYPTLLDPVTPDMRLAWEE  377 (473)
T ss_pred             HHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC---CCeEEeeEEEecCCCCCHHHhCc
Confidence            999999999999999999999999999999999999999999999999999764   3899999999999999999987 


Q ss_pred             ---e---eeEecCcccccC
Q psy7043         155 ---P---CRLVDTIPTYIR  167 (167)
Q Consensus       155 ---p---v~~v~~~~~ai~  167 (167)
                         |   |+.+++++|||+
T Consensus       378 ~fgPvl~v~~~~~~~eai~  396 (473)
T cd07082         378 PFGPVLPIIRVNDIEEAIE  396 (473)
T ss_pred             CcCceEEEEEeCCHHHHHH
Confidence               3   566666777763

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>KOG2456|consensus

Probab=100.00  E-value=5.6e-39  Score=255.39  Aligned_cols=158  Identities=19%  Similarity=0.327  Sum_probs=148.1

Q ss_pred             eEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           3 LFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         3 ~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      +|+||||+++|       ++++.||+||||||||++|++++|++.++++|+|++|.|+||+|.+|++++++.++++.+++
T Consensus       183 ~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~  262 (477)
T KOG2456|consen  183 HIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLID  262 (477)
T ss_pred             EEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHH
Confidence            68999999998       79999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +++..++++ .|....++.+++.+||..|++|+.+++++-    .+++.||..+..  ..|++|||+.|+.+++++||| 
T Consensus       263 alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~~--d~~I~PTIL~DV~~~~p~M~eE  335 (477)
T KOG2456|consen  263 ALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDES--DRYIAPTILLDVPEDSPVMQEE  335 (477)
T ss_pred             HHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccchh--hcccCCeEEecCCCCChhhhhh
Confidence            999999999 576677889999999999999999998742    689999998765  789999999999999999999 


Q ss_pred             ------eeeEecCcccccC
Q psy7043         155 ------PCRLVDTIPTYIR  167 (167)
Q Consensus       155 ------pv~~v~~~~~ai~  167 (167)
                            ||++|.+++|+|+
T Consensus       336 IFGPiLPIi~v~~l~Eai~  354 (477)
T KOG2456|consen  336 IFGPILPIITVQSLDEAIN  354 (477)
T ss_pred             hccCccceeEhhhHHHHHH
Confidence                  6899999999884

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=9.2e-38  Score=262.96  Aligned_cols=164  Identities=15%  Similarity=0.183  Sum_probs=143.8

Q ss_pred             CceEEeecChhhh-------ccCC---CceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQ---PRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY   70 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~---~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~   70 (167)
                      |.+|.||||+++|       ++++   +|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|+|||++++
T Consensus       240 v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~  319 (500)
T TIGR01238       240 IAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVA  319 (500)
T ss_pred             cCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhH
Confidence            5689999999998       2344   89999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCCCCceEeeEEEecCCCC
Q psy7043          71 DEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPN--PTIGELYYEPTLITDITPE  148 (167)
Q Consensus        71 ~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~--~~~~g~~~~Ptvl~~~~~~  148 (167)
                      ++|+++|+++++++++|+|.+++++|||++++.+++++.++|+++.+.|++++.++...  ...+|+|++|||+.+  ++
T Consensus       320 d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~  397 (500)
T TIGR01238       320 DRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DD  397 (500)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CC
Confidence            99999999999999999999999999999999999999999999999999987543211  112599999999973  68


Q ss_pred             Cceeee----eeeEecC-----ccccc
Q psy7043         149 MDCYRF----PCRLVDT-----IPTYI  166 (167)
Q Consensus       149 ~~i~~e----pv~~v~~-----~~~ai  166 (167)
                      |.+++|    ||+.|..     ++|||
T Consensus       398 ~~~~~eE~FgPvl~v~~~~~~~~deai  424 (500)
T TIGR01238       398 IAELSEEVFGPVLHVVRYKARELDQIV  424 (500)
T ss_pred             chHhhCCCcCCEEEEEEeCCCCHHHHH
Confidence            888888    4555544     56665

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=2.8e-37  Score=261.28  Aligned_cols=161  Identities=19%  Similarity=0.248  Sum_probs=137.6

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecc-------
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEK-------   68 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~-------   68 (167)
                      |++|+||||+++|     ....+++++|||||||+||++|+|++.+++.+++++|.|+||+|++++|+|||++       
T Consensus       278 v~~I~FTGSt~~G~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g  357 (551)
T TIGR02288       278 VRIIDFTGSNAFGQWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQG  357 (551)
T ss_pred             ccEEEEECCHHHHHHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccc
Confidence            6899999999998     2335899999999999999999999999999999999999999999999999999       


Q ss_pred             --cHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC---CCCCceEeeEEEe
Q psy7043          69 --RYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP---TIGELYYEPTLIT  143 (167)
Q Consensus        69 --i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~---~~~g~~~~Ptvl~  143 (167)
                        +||+|+++|+++++++ +|+|.++.+++||++++.+++++    ++++++| +++.||....   .++++|++|||+.
T Consensus       358 ~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~  431 (551)
T TIGR02288       358 RKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLK  431 (551)
T ss_pred             hhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEE
Confidence              7999999999999999 99999999999999999999996    5667778 5666665421   1134699999995


Q ss_pred             cCCCCCceeee----e---eeEecCcccccC
Q psy7043         144 DITPEMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       144 ~~~~~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      ...++|++++|    |   |+.+++++|||+
T Consensus       432 ~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~  462 (551)
T TIGR02288       432 CDAADEAAYMQERFGPIAFVVAVDDGAHAVE  462 (551)
T ss_pred             cCCCCCHHHhCCCcCCEEEEEEECCHHHHHH
Confidence            33359999998    3   666677777763

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=1.1e-36  Score=252.29  Aligned_cols=159  Identities=27%  Similarity=0.403  Sum_probs=144.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+.+|       ++++||+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       177 v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  256 (426)
T cd07087         177 FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDEL  256 (426)
T ss_pred             CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEcHHHHHHH
Confidence            5789999999988       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|++++++++.|+| ++++++||+++..+++++.++++++     ++++||..+.  +|+|++|||+.+++++|++++
T Consensus       257 ~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~  328 (426)
T cd07087         257 IEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVDK--EERYIAPTILDDVSPDSPLMQ  328 (426)
T ss_pred             HHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccCC--CCCEEeeEEEecCCCCCHHHh
Confidence            9999999999975555 5789999999999999999999865     7999987643  489999999999999999999


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      |    |   |+.+++++|||+
T Consensus       329 eE~fgPvl~v~~~~~~~eai~  349 (426)
T cd07087         329 EEIFGPILPILTYDDLDEAIE  349 (426)
T ss_pred             cccccceEEEEEeCCHHHHHH
Confidence            8    3   677778888874

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=1.9e-36  Score=256.48  Aligned_cols=160  Identities=17%  Similarity=0.229  Sum_probs=139.3

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecc-------
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEK-------   68 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~-------   68 (167)
                      |++|.||||+.+|     ....+|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++       
T Consensus       278 v~~I~FTGS~~~G~~i~~~a~~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g  357 (549)
T cd07127         278 VRIIDFTGSNAFGDWLEANARQAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDG  357 (549)
T ss_pred             CCEEEEECCHHHHHHHHHHhccCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccc
Confidence            5789999999998     2346899999999999999999999999999999999999999999999999999       


Q ss_pred             --cHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEe
Q psy7043          69 --RYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLIT  143 (167)
Q Consensus        69 --i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~  143 (167)
                        +||+|+++|+++++++ +|+|.+..+.+|||+++.+++++.+    +++.|+ +++||..+..   ++++|++|||+.
T Consensus       358 ~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~  431 (549)
T cd07127         358 RKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLK  431 (549)
T ss_pred             hhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEE
Confidence              8999999999999999 9999999999999999999999864    555665 7777765421   134577999999


Q ss_pred             cCCCCCceeee----e---eeEecCccccc
Q psy7043         144 DITPEMDCYRF----P---CRLVDTIPTYI  166 (167)
Q Consensus       144 ~~~~~~~i~~e----p---v~~v~~~~~ai  166 (167)
                      +++++|++++|    |   |+.+++.+|||
T Consensus       432 ~~~~d~~i~~eE~FGPVl~V~~~~d~~eai  461 (549)
T cd07127         432 LDASDEAAYAEERFGPIAFVVATDSTDHSI  461 (549)
T ss_pred             eCCCCCHHHcCCCcCceEEEEEeCCHHHHH
Confidence            88899999999    4   56666666665

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=2.1e-36  Score=273.62  Aligned_cols=160  Identities=19%  Similarity=0.226  Sum_probs=144.5

Q ss_pred             CceEEeecChhhh-------ccCC------CceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------QKTQ------PRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~------~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|.||||+++|       ++++      +|+++|+|||||+||++|||++.+++.+++++|.|+||+|++++++|||+
T Consensus       848 V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e  927 (1318)
T PRK11809        848 VRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQD  927 (1318)
T ss_pred             cCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcH
Confidence            5789999999998       2333      89999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCceEeeEEEecC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT--IGELYYEPTLITDI  145 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~  145 (167)
                      +++|+|+++|+++++++++|+|++.++++||+|++.+++++.++|++++++|++++.++...+.  ..|+|++|||+.. 
T Consensus       928 ~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~- 1006 (1318)
T PRK11809        928 DVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL- 1006 (1318)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec-
Confidence            9999999999999999999999999999999999999999999999999999999987754321  2599999999974 


Q ss_pred             CCCCceeee----eeeEecCc
Q psy7043         146 TPEMDCYRF----PCRLVDTI  162 (167)
Q Consensus       146 ~~~~~i~~e----pv~~v~~~  162 (167)
                       +++.++++    ||++|..|
T Consensus      1007 -~~~~~l~eEiFGPVL~V~~~ 1026 (1318)
T PRK11809       1007 -DSFDELKREVFGPVLHVVRY 1026 (1318)
T ss_pred             -cchhhhcCcccCceEEEEEe
Confidence             56777877    67777665

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=4.3e-36  Score=268.48  Aligned_cols=160  Identities=16%  Similarity=0.184  Sum_probs=144.0

Q ss_pred             CceEEeecChhhh-------c---cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccH
Q psy7043           1 MRLFGLKNSFPVT-------Q---KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY   70 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~---~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~   70 (167)
                      |.+|.||||+.+|       +   ..++|+++|+|||||+||++|||++.|++.+++++|.|+||+|++++++|||++++
T Consensus       764 v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~  843 (1038)
T PRK11904        764 IAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIA  843 (1038)
T ss_pred             cCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHH
Confidence            5689999999998       1   23789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCC
Q psy7043          71 DEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEM  149 (167)
Q Consensus        71 ~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~  149 (167)
                      ++|+++|+++++++++|+|.+.++++||+|++.+++++.++|+++.+ |+++++||..++. .+|+|++|||+..  +++
T Consensus       844 d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~  920 (1038)
T PRK11904        844 DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSI  920 (1038)
T ss_pred             HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCc
Confidence            99999999999999999999999999999999999999999999876 8999999976532 2599999999963  567


Q ss_pred             ceeee----eeeEecCcc
Q psy7043         150 DCYRF----PCRLVDTIP  163 (167)
Q Consensus       150 ~i~~e----pv~~v~~~~  163 (167)
                      .+++|    ||++|..|+
T Consensus       921 ~~~~eEiFGPVL~V~~~~  938 (1038)
T PRK11904        921 SQLEREVFGPILHVIRYK  938 (1038)
T ss_pred             HHhCCCCcCcEEEEEEeC
Confidence            77887    677766653

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=8.5e-36  Score=247.18  Aligned_cols=167  Identities=33%  Similarity=0.520  Sum_probs=154.3

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |+.|.||||..++       +++++|+++|+||+||+||++|+|++.+++.+++++|.|+||.|++++++|||++++++|
T Consensus       176 i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~  255 (432)
T cd07078         176 VDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEF  255 (432)
T ss_pred             CCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHHHH
Confidence            5789999999987       477899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|+++++++||++++.+++++.++++++.++|+++++||..+..+.|+|++|||+.++++++++++
T Consensus       256 ~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~  335 (432)
T cd07078         256 VERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQ  335 (432)
T ss_pred             HHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChhhh
Confidence            99999999999999999999999999999999999999999999999999998765422489999999999999999998


Q ss_pred             e----e---eeEecCcccccC
Q psy7043         154 F----P---CRLVDTIPTYIR  167 (167)
Q Consensus       154 e----p---v~~v~~~~~ai~  167 (167)
                      +    |   |+.+.+++|||+
T Consensus       336 ~E~fgPvl~v~~~~~~~eai~  356 (432)
T cd07078         336 EEIFGPVLPVIPFKDEEEAIE  356 (432)
T ss_pred             CCCcCceEEEEEeCCHHHHHH
Confidence            8    3   667777777763

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=2.3e-35  Score=266.53  Aligned_cols=161  Identities=19%  Similarity=0.205  Sum_probs=144.1

Q ss_pred             CceEEeecChhhh-------c---cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccH
Q psy7043           1 MRLFGLKNSFPVT-------Q---KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY   70 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~---~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~   70 (167)
                      |++|.||||+.+|       +   ...+|+++|+|||||+||++|||++.+++.+++++|.|+||+|++++++|||++++
T Consensus       756 v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~  835 (1208)
T PRK11905        756 IAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVA  835 (1208)
T ss_pred             cCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHH
Confidence            5789999999998       2   33599999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCc
Q psy7043          71 DEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD  150 (167)
Q Consensus        71 ~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~  150 (167)
                      ++|+++|+++++++++|+|.+.++++||+|++.+++++.++|+++.++|+.++.++......+|+|++|||+. + +++.
T Consensus       836 d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~  913 (1208)
T PRK11905        836 DRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSIS  913 (1208)
T ss_pred             HHHHHHHHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChH
Confidence            9999999999999999999999999999999999999999999999999988877643221259999999996 3 5678


Q ss_pred             eeee----eeeEecCcc
Q psy7043         151 CYRF----PCRLVDTIP  163 (167)
Q Consensus       151 i~~e----pv~~v~~~~  163 (167)
                      ++++    ||++|..|+
T Consensus       914 ~~~eEiFGPVL~V~~y~  930 (1208)
T PRK11905        914 DLEREVFGPVLHVVRFK  930 (1208)
T ss_pred             HhcCCccCceEEEEEeC
Confidence            8887    677776653

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=3.2e-35  Score=246.44  Aligned_cols=160  Identities=20%  Similarity=0.309  Sum_probs=137.6

Q ss_pred             CceEEeecChhhh----ccCCCceeEeCCCCCeeeEeCCC-CHHHHHHHHHHhhhhhcCCceecCcEEEEeccc-HHHHH
Q psy7043           1 MRLFGLKNSFPVT----QKTQPRPKVMPREASLNMVFESA-NIDLAIQGALASKFRNCGQTCISANRFLIHEKR-YDEFI   74 (167)
Q Consensus         1 ~~~v~ftGs~~~g----~~~~~~v~lElgGknp~iV~~da-d~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i-~~~f~   74 (167)
                      +++|+||||+++|    ....+++.+|+|||||+||++|+ |++.+++.+++++|.|+||+|++++|+|||+++ +++|+
T Consensus       221 v~~V~FTGS~~vGr~i~~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~  300 (489)
T cd07126         221 PRMTLFTGSSKVAERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGIL  300 (489)
T ss_pred             CCEEEEECCHHHHHHHHHHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHH
Confidence            5789999999999    23447899999999999999999 999999999999999999999999999999995 68999


Q ss_pred             HHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHH-CCCEEEeCCccCCCC---CC-ceEeeEEEec-----
Q psy7043          75 SKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIK-KGAKVLLGGKPNPTI---GE-LYYEPTLITD-----  144 (167)
Q Consensus        75 ~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~~---~g-~~~~Ptvl~~-----  144 (167)
                      ++|++.++++++|+     +++||+++.. .+++.++++++++ +|+++++||..++..   ++ .|++|||+..     
T Consensus       301 ~~l~~~~~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~  374 (489)
T cd07126         301 DKLKALAEQRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEI  374 (489)
T ss_pred             HHHHHHHHhcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccc
Confidence            99999999998874     5789999998 9999999999997 999999999764321   23 3899999952     


Q ss_pred             -CCCCCceeee----eeeE---ecC--ccccc
Q psy7043         145 -ITPEMDCYRF----PCRL---VDT--IPTYI  166 (167)
Q Consensus       145 -~~~~~~i~~e----pv~~---v~~--~~~ai  166 (167)
                       ++++|++++|    ||+.   +.+  ++|||
T Consensus       375 ~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai  406 (489)
T cd07126         375 AIEENFELVTTEVFGPFQVVTEYKDEQLPLVL  406 (489)
T ss_pred             cCCCCCHHHhCCCcCCEEEEEEECCCCHHHHH
Confidence             5789999998    4444   455  45565

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=7.3e-35  Score=243.19  Aligned_cols=154  Identities=17%  Similarity=0.164  Sum_probs=135.6

Q ss_pred             CceEEeecChhhh-------cc--CCCceeEeCCCCCeeeEeCCC---CHHHHHHHHHHhhhhhcCCceecCcEEEEecc
Q psy7043           1 MRLFGLKNSFPVT-------QK--TQPRPKVMPREASLNMVFESA---NIDLAIQGALASKFRNCGQTCISANRFLIHEK   68 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~--~~~~v~lElgGknp~iV~~da---d~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~   68 (167)
                      |++|+||||+.+|       ++  +++|+++|||||||+||++|+   |++.+++.+++++|.|+||.|++++|+|||++
T Consensus       191 v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~  270 (454)
T cd07129         191 IKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAG  270 (454)
T ss_pred             ccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCc
Confidence            5789999999998       34  699999999999999999999   89999999999999999999999999999999


Q ss_pred             -cHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC-CCEEEeCCccCCCCCCceEeeEEEecCC
Q psy7043          69 -RYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKK-GAKVLLGGKPNPTIGELYYEPTLITDIT  146 (167)
Q Consensus        69 -i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~-Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~  146 (167)
                       ++|+|+++|+++++++++          ||++++...++..++|++++++ |+++++||....  +|+|++|||+...+
T Consensus       271 ~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~~--~g~~~~Ptvl~~~~  338 (454)
T cd07129         271 PAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAAE--GGNQAAPTLFKVDA  338 (454)
T ss_pred             ccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcCC--CCCccCCEEEEccC
Confidence             999999999999998865          4677777778888888999888 999999997642  58999999998665


Q ss_pred             ---CCCceeee----e---eeEecCccccc
Q psy7043         147 ---PEMDCYRF----P---CRLVDTIPTYI  166 (167)
Q Consensus       147 ---~~~~i~~e----p---v~~v~~~~~ai  166 (167)
                         ++|++++|    |   |+.+++.++||
T Consensus       339 ~~~~~~~i~~~E~FGPv~~v~~~~~~~eai  368 (454)
T cd07129         339 AAFLADPALQEEVFGPASLVVRYDDAAELL  368 (454)
T ss_pred             CccccchhhcccCCCCeEEEEEeCCHHHHH
Confidence               68999999    4   55566666665

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>KOG2454|consensus

Probab=100.00  E-value=4.7e-35  Score=232.16  Aligned_cols=154  Identities=25%  Similarity=0.474  Sum_probs=148.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      ||++.|.||..+|       ++++.||+||||||+|+||++|+|++..+.-++++-|-.+||.|.+..|++||+++|+.|
T Consensus       271 ~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~  350 (583)
T KOG2454|consen  271 VKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAF  350 (583)
T ss_pred             cceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHH
Confidence            6899999999987       799999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +..|.++++.++.|.|+..+.+||.|++..++|.++++|++|+.+||+++.||.+...   +.|.|++||+|.+++++|+
T Consensus       351 i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMK  430 (583)
T KOG2454|consen  351 IGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMK  430 (583)
T ss_pred             HHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhh
Confidence            9999999999999999999999999999999999999999999999999999986543   4699999999999999999


Q ss_pred             eeee
Q psy7043         151 CYRF  154 (167)
Q Consensus       151 i~~e  154 (167)
                      |+||
T Consensus       431 Iaqe  434 (583)
T KOG2454|consen  431 IAQE  434 (583)
T ss_pred             hHhh
Confidence            9999

>KOG2452|consensus

Probab=100.00  E-value=1.7e-34  Score=234.16  Aligned_cols=163  Identities=24%  Similarity=0.449  Sum_probs=156.9

Q ss_pred             CceEEeecChhhh--------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT--------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g--------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      +|+|+||||++.|        ..+.|+|+|||||++|+|++.|||++.|++.-..+.|+|-|..|++..|+||.+++.|+
T Consensus       622 vrkigftgsteig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~  701 (881)
T KOG2452|consen  622 VRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDE  701 (881)
T ss_pred             cceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHH
Confidence            6999999999999        37899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+.++.++.+++++|+|+|.+++-||....+|..++-.|.+.+++.||++.+||++.+. .|+|++|||++++.+.|-+.
T Consensus       702 fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r-~g~~f~pti~s~i~d~~f~a  780 (881)
T KOG2452|consen  702 FVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPR-PGFFFEPTVFTDVEDHMFIA  780 (881)
T ss_pred             HHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCC-CCcccCCeeecccchhhhhh
Confidence            99999999999999999999999999999999999999999999999999999998765 79999999999999999999


Q ss_pred             ee----eeeEecCccc
Q psy7043         153 RF----PCRLVDTIPT  164 (167)
Q Consensus       153 ~e----pv~~v~~~~~  164 (167)
                      .|    ||+.|.+|+|
T Consensus       781 ~eesfgpim~is~f~d  796 (881)
T KOG2452|consen  781 KEESFGPVMIISRFAD  796 (881)
T ss_pred             hccccCceEEEEecCC
Confidence            88    8999999986

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=5.2e-34  Score=237.32  Aligned_cols=155  Identities=14%  Similarity=0.172  Sum_probs=131.6

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCC-CHHHHHHHHHHhhhhhcCCceecCcEEEEecc-cHHHH
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESA-NIDLAIQGALASKFRNCGQTCISANRFLIHEK-RYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~da-d~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~-i~~~f   73 (167)
                      |++|.||||+++|     ....+|+++|||||||+||++|+ |++.+++.+++++|.|+||.|++++|+|||++ ++++|
T Consensus       180 v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f  259 (442)
T cd07084         180 PKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPL  259 (442)
T ss_pred             CCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccHHHH
Confidence            5789999999998     12227999999999999999999 69999999999999999999999999999999 99999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC-CCEEEeCCccCC-----CCCCceEeeEEEecCCC
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKK-GAKVLLGGKPNP-----TIGELYYEPTLITDITP  147 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~-Ga~v~~gg~~~~-----~~~g~~~~Ptvl~~~~~  147 (167)
                      +++|+++++++++|     ++.+||++++.    +.++|+++.++ |+++++||...+     ...|+|++|||+.++++
T Consensus       260 ~~~l~~~~~~~~~g-----~~~~gpl~~~~----~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~  330 (442)
T cd07084         260 VEKLKALLARRKLE-----DLLLGPVQTFT----TLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDE  330 (442)
T ss_pred             HHHHHHHHHhcccC-----ccccChhhhHH----HHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCc
Confidence            99999999999988     57899997764    55566677777 589999987532     11489999999999999


Q ss_pred             CC---ceeee----eeeEecCccc
Q psy7043         148 EM---DCYRF----PCRLVDTIPT  164 (167)
Q Consensus       148 ~~---~i~~e----pv~~v~~~~~  164 (167)
                      +|   ++++|    ||+.|..|++
T Consensus       331 ~~~~~~i~~eE~FGPvl~v~~~~~  354 (442)
T cd07084         331 ILKTYELVTEEIFGPFAIVVEYKK  354 (442)
T ss_pred             ccccchHHheeccCceEEEEEeCC
Confidence            97   89988    5555544443

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=1.7e-34  Score=239.49  Aligned_cols=152  Identities=15%  Similarity=0.148  Sum_probs=134.6

Q ss_pred             CceEEeecChhhh---ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKF   77 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l   77 (167)
                      |++|.||||+.++   ++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++.+|+|||+++||+|+++|
T Consensus       179 V~~V~FTGs~~v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l  258 (439)
T cd07081         179 IGLLLATGGPAVVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLF  258 (439)
T ss_pred             CCEEEEECCHHHHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHHHHHHHH
Confidence            6899999999886   6889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCc-cCCCCCCceEeeE---EEecCC--CCCce
Q psy7043          78 SEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK-PNPTIGELYYEPT---LITDIT--PEMDC  151 (167)
Q Consensus        78 ~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~-~~~~~~g~~~~Pt---vl~~~~--~~~~i  151 (167)
                      ++++               ||+++..+++++.++|+++..+|++++.|+. ......|+|++||   ++.+++  ++|++
T Consensus       259 ~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i  323 (439)
T cd07081         259 EGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHEP  323 (439)
T ss_pred             HHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEEecCCCCCCch
Confidence            8874               8999999999999999999999998754432 1010148899998   999988  99999


Q ss_pred             eeee-------eeEecCcccccC
Q psy7043         152 YRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~ep-------v~~v~~~~~ai~  167 (167)
                      ++||       |+.++++||||+
T Consensus       324 ~~eE~FGPVl~v~~~~~~dEAi~  346 (439)
T cd07081         324 FAHEKLSPVLAMYRAANFADADA  346 (439)
T ss_pred             hhhCccCceEEEEEcCCHHHHHH
Confidence            9993       677788888873

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=2.5e-33  Score=232.28  Aligned_cols=152  Identities=14%  Similarity=0.145  Sum_probs=132.2

Q ss_pred             CceEEeecChhhh---ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKF   77 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l   77 (167)
                      |++|.||||+++|   .+..||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus       181 v~~I~fTGs~~~g~~v~~~~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L  260 (429)
T cd07121         181 INLLVVTGGPAVVKAALSSGKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAM  260 (429)
T ss_pred             ccEEEeeCCHHHHHHHHhCCCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEEeHHHHHHHHHHH
Confidence            6799999999999   4668999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC--CCEEEeCCccCC--CCCCceEe---eEEEecCCCCCc
Q psy7043          78 SEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKK--GAKVLLGGKPNP--TIGELYYE---PTLITDITPEMD  150 (167)
Q Consensus        78 ~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~--Ga~v~~gg~~~~--~~~g~~~~---Ptvl~~~~~~~~  150 (167)
                      +++      +         .++++..+++++.++++++.+.  |++++.||....  ...|+|++   |||+.+++++|+
T Consensus       261 ~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~  325 (429)
T cd07121         261 QRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIVETDKDHP  325 (429)
T ss_pred             HHC------C---------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCC
Confidence            886      1         1479999999999999998864  689999885310  01377877   599999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.++++++||+
T Consensus       326 i~~eE~FgPVl~v~~~~~~~eAi~  349 (429)
T cd07121         326 FVVEEQMMPILPVVRVKNFDEAIE  349 (429)
T ss_pred             ccccccccceEEEEEeCCHHHHHH
Confidence            9987    3   666778888874

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=99.98  E-value=2.9e-32  Score=228.92  Aligned_cols=152  Identities=13%  Similarity=0.132  Sum_probs=138.2

Q ss_pred             CceEEeecChhhh---ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKF   77 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l   77 (167)
                      |++|.||||+..+   ..+.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++.+|+|||+++|++|+++|
T Consensus       188 vd~V~fTGs~~v~~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L  267 (488)
T TIGR02518       188 TSLILATGGEAMVKAAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEEL  267 (488)
T ss_pred             cCEEEEeCCHHHHHHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHH
Confidence            6799999999876   5789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHH-------HHhhccCCC-CCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCC
Q psy7043          78 SEK-------IKLLVVGDG-AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM  149 (167)
Q Consensus        78 ~~~-------~~~~~~g~~-~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~  149 (167)
                      +++       .+.+++|+| +++++++||+++..+++++.++++.++.+|+++++||..               .+.++|
T Consensus       268 ~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~---------------~v~~~~  332 (488)
T TIGR02518       268 KKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN---------------GVGNKN  332 (488)
T ss_pred             HHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC---------------CCCCCC
Confidence            998       899999996 678899999999999999999999999999999998853               256677


Q ss_pred             ceeee------eeeEecCcccccC
Q psy7043         150 DCYRF------PCRLVDTIPTYIR  167 (167)
Q Consensus       150 ~i~~e------pv~~v~~~~~ai~  167 (167)
                      ++.+|      +|..+++++|||+
T Consensus       333 ~~~~E~fgPVl~v~~~~~~dEAI~  356 (488)
T TIGR02518       333 PYSREKLTTILAFYTEENWHEACE  356 (488)
T ss_pred             ccccCccCceEEEEEeCCHHHHHH
Confidence            77656      4777888888874

>KOG2453|consensus

Probab=99.98  E-value=5e-33  Score=217.28  Aligned_cols=161  Identities=22%  Similarity=0.357  Sum_probs=150.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |+.++||||++.|       ..+.-+..|||||+|+.||++|||+..++...++++...+||+|+..+|+++|+++||++
T Consensus       236 vnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~v  315 (507)
T KOG2453|consen  236 VNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQV  315 (507)
T ss_pred             eeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHH
Confidence            5789999999998       477888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+....++++|+|+++++.+||+-++.+..+...-+++++++|+++++||+..+. +|+|++|||++ +..|.++..
T Consensus       316 lerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er-~gnfveptivt-l~hda~vv~  393 (507)
T KOG2453|consen  316 LERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLER-DGNFVEPTIVT-LKHDAPVVL  393 (507)
T ss_pred             HHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeecc-CCCcccceEEE-ecCCcchhh
Confidence            9999999999999999999999999999999999999999999999999999998765 79999999997 888988887


Q ss_pred             e----eeeEecCcc
Q psy7043         154 F----PCRLVDTIP  163 (167)
Q Consensus       154 e----pv~~v~~~~  163 (167)
                      +    ||+.|..|+
T Consensus       394 ~etfapilyvlkf~  407 (507)
T KOG2453|consen  394 RETFAPILYVLKFS  407 (507)
T ss_pred             hhhccceeeEEecc
Confidence            7    666655543

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=99.98  E-value=1.8e-32  Score=228.98  Aligned_cols=151  Identities=16%  Similarity=0.180  Sum_probs=129.0

Q ss_pred             CceEEeecChhhh---ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKF   77 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l   77 (167)
                      |++|+||||+++|   .+..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus       213 vd~I~fTGS~~~G~~v~~~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l  292 (465)
T PRK15398        213 IALLVVTGGPAVVKAAMKSGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLM  292 (465)
T ss_pred             ccEEEeeCCHHHHHHHHHcCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHH
Confidence            5799999999999   4578999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccC---CCCCCceE---eeEEEecCCCCCce
Q psy7043          78 SEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPN---PTIGELYY---EPTLITDITPEMDC  151 (167)
Q Consensus        78 ~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~---~~~~g~~~---~Ptvl~~~~~~~~i  151 (167)
                      +++      +         +|++++.+++++.++++++.+++++++.|+...   .. .|+++   +|||+.+++++|++
T Consensus       293 ~~~------~---------~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~-~G~~~~~~~~tvl~~v~~d~~i  356 (465)
T PRK15398        293 EKN------G---------AVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEA-AGINVPKDTRLLIVETDANHPF  356 (465)
T ss_pred             HHc------C---------CccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHh-CCCCCCCCCCEEEecCCCCCch
Confidence            886      1         278999999999999986544556777765421   11 25555   48999999999999


Q ss_pred             eee-------eeeEecCcccccC
Q psy7043         152 YRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~e-------pv~~v~~~~~ai~  167 (167)
                      ++|       +|+.+++++|||+
T Consensus       357 ~~eE~FGPVl~V~~~~d~deAi~  379 (465)
T PRK15398        357 VVTELMMPVLPVVRVKDVDEAIA  379 (465)
T ss_pred             hcccccCceEEEEEeCCHHHHHH
Confidence            988       3677788888874

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=99.97  E-value=2e-32  Score=226.94  Aligned_cols=152  Identities=16%  Similarity=0.202  Sum_probs=132.8

Q ss_pred             CceEEeecChhhh---ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKF   77 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l   77 (167)
                      |++|+||||++++   +++++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|+|||+++||+|+++|
T Consensus       179 v~~v~ftGs~~v~~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l  258 (436)
T cd07122         179 VDLILATGGPGMVKAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAEL  258 (436)
T ss_pred             cCEEEEcCCHHHHHHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEEEechhHHHHHHHH
Confidence            5789999999987   5789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhh-------ccCCC-CCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCC
Q psy7043          78 SEKIKLL-------VVGDG-AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM  149 (167)
Q Consensus        78 ~~~~~~~-------~~g~~-~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~  149 (167)
                      +++...+       ++|++ .+..+.+||+++..+.+++..+++.+..+|++++.++               +.+++++|
T Consensus       259 ~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~---------------~~~v~~~~  323 (436)
T cd07122         259 KRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE---------------ETGVGPEE  323 (436)
T ss_pred             HHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe---------------cCCCCCCC
Confidence            9999887       78887 4677889999999999988887776666666666444               45788899


Q ss_pred             ceeee---e---eeEecCcccccC
Q psy7043         150 DCYRF---P---CRLVDTIPTYIR  167 (167)
Q Consensus       150 ~i~~e---p---v~~v~~~~~ai~  167 (167)
                      ++++|   |   |+.+++++|||+
T Consensus       324 ~~~~E~FGPVl~v~~~~~~~eAi~  347 (436)
T cd07122         324 PLSREKLSPVLAFYRAEDFEEALE  347 (436)
T ss_pred             cchhcccCCeEEEEEeCCHHHHHH
Confidence            99988   4   666777888774

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>KOG2455|consensus

Probab=99.97  E-value=6.9e-31  Score=210.83  Aligned_cols=159  Identities=21%  Similarity=0.343  Sum_probs=147.4

Q ss_pred             eEEeecChhhh-------------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEeccc
Q psy7043           3 LFGLKNSFPVT-------------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKR   69 (167)
Q Consensus         3 ~v~ftGs~~~g-------------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i   69 (167)
                      ++.||||..+-             ..+..+++.|.||||..+|+++||++.++...++++|..+||.|.+.+|+||++++
T Consensus       278 glnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~  357 (561)
T KOG2455|consen  278 GLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESL  357 (561)
T ss_pred             eeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhh
Confidence            57899999886             37789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhccCCC-CCCCCccCccCCHHHHHHHHHHHHHHHH-CCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          70 YDEFISKFSEKIKLLVVGDG-AVSGVNVGPLINKAQLTKVTRIVDDAIK-KGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        70 ~~~f~~~l~~~~~~~~~g~~-~~~~~~~gp~i~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      |+.+.++|.+..+++++|+| .|.++.+||+|+.++++|+.++|+.|.+ ....|++||+.++. .|+|+.|||+...+|
T Consensus       358 wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS-~G~FV~PTiv~~kdP  436 (561)
T KOG2455|consen  358 WPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDS-TGYFVEPTIVLSKDP  436 (561)
T ss_pred             cHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCC-CCeeecceEEEccCC
Confidence            99999999999999999997 7899999999999999999999999986 34789999999876 899999999999999


Q ss_pred             CCceeee----eeeEecCc
Q psy7043         148 EMDCYRF----PCRLVDTI  162 (167)
Q Consensus       148 ~~~i~~e----pv~~v~~~  162 (167)
                      .++||.|    ||+.|.=|
T Consensus       437 ~~pim~ee~fGPvLsVyvY  455 (561)
T KOG2455|consen  437 KDPIMTEEIFGPVLSVYVY  455 (561)
T ss_pred             CcchhhhhccCceeEEEEe
Confidence            9999999    56666543

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=99.96  E-value=1.5e-29  Score=224.83  Aligned_cols=152  Identities=13%  Similarity=0.150  Sum_probs=130.3

Q ss_pred             CceEEeecChhhh---ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKF   77 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l   77 (167)
                      |++|.||||+.++   +.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|+++|
T Consensus       192 vd~I~fTGs~~v~~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l  271 (862)
T PRK13805        192 IALILATGGPGMVKAAYSSGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEF  271 (862)
T ss_pred             ccEEEecCCHHHHHHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHH
Confidence            5789999999986   5789999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEE-EeCCccCC--CCCCceEeeEE------EecCCCC
Q psy7043          78 SEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKV-LLGGKPNP--TIGELYYEPTL------ITDITPE  148 (167)
Q Consensus        78 ~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v-~~gg~~~~--~~~g~~~~Ptv------l~~~~~~  148 (167)
                      +++.               +|+++..+++++.++++++...|++. +.|+....  ...|+|++||+      +.+++++
T Consensus       272 ~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~  336 (862)
T PRK13805        272 ASHG---------------AYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGES  336 (862)
T ss_pred             HHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCC
Confidence            8861               58999999999999999887655532 44553211  01378889987      7789999


Q ss_pred             Cceeee------eeeEecCcccccC
Q psy7043         149 MDCYRF------PCRLVDTIPTYIR  167 (167)
Q Consensus       149 ~~i~~e------pv~~v~~~~~ai~  167 (167)
                      |++++|      +|+.+++++|||+
T Consensus       337 ~~~~~E~fgPVl~v~~~~~~deAi~  361 (862)
T PRK13805        337 EPLSHEKLSPVLAMYKAKDFEDAVE  361 (862)
T ss_pred             CcchhcccCcEEEEEEECCHHHHHH
Confidence            999999      4777788888874

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=99.95  E-value=2.3e-28  Score=201.51  Aligned_cols=123  Identities=15%  Similarity=0.222  Sum_probs=104.9

Q ss_pred             CceEEeecChhhh----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |++|+||||+++|    ..-++|++||||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++||+|+++
T Consensus       192 v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~  270 (406)
T cd07079         192 IDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPK  270 (406)
T ss_pred             ccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHH
Confidence            5789999999999    23389999999999999999999999999999999999999 999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee--
Q psy7043          77 FSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF--  154 (167)
Q Consensus        77 l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e--  154 (167)
                      |+++++++                                  |++++ +|...    ..|++||    ++++|++++|  
T Consensus       271 l~~~~~~~----------------------------------ga~~~-~g~~~----~~~~~pt----v~~d~~i~~eE~  307 (406)
T cd07079         271 LAEALREA----------------------------------GVELR-GDEET----LAILPGA----KPATEEDWGTEY  307 (406)
T ss_pred             HHHHHHHC----------------------------------CCEEe-cCHHH----HHhcccc----cCCCcchhhhhh
Confidence            99987752                                  45654 33221    2378888    7899999999  


Q ss_pred             -----eeeEecCcccccC
Q psy7043         155 -----PCRLVDTIPTYIR  167 (167)
Q Consensus       155 -----pv~~v~~~~~ai~  167 (167)
                           +|+.++++||||+
T Consensus       308 FGPVl~v~~~~~~deAi~  325 (406)
T cd07079         308 LDLILAVKVVDSLDEAIA  325 (406)
T ss_pred             hCceeEEEEeCCHHHHHH
Confidence                 3667788888874

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=99.94  E-value=2.8e-27  Score=194.93  Aligned_cols=162  Identities=21%  Similarity=0.237  Sum_probs=142.0

Q ss_pred             CceEEeecChhhh----------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccH
Q psy7043           1 MRLFGLKNSFPVT----------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY   70 (167)
Q Consensus         1 ~~~v~ftGs~~~g----------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~   70 (167)
                      ++.|.||||++++          .....|++.|+||.|++||+++|--++++..++.|+|.++||+|++.+.+|+++++.
T Consensus       316 v~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvA  395 (769)
T COG4230         316 VAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVA  395 (769)
T ss_pred             cceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHH
Confidence            5789999999998          356788999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCc
Q psy7043          71 DEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD  150 (167)
Q Consensus        71 ~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~  150 (167)
                      |..+++|+-.|.++++|+|..-.+++||+|+....+.+++.|+.....|-.+..-....+...|.|+.||++ .++.-+.
T Consensus       396 d~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~-El~~~~e  474 (769)
T COG4230         396 DRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLI-ELENLDE  474 (769)
T ss_pred             HHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeE-EcCCHHH
Confidence            999999999999999999999999999999999999999999988777644433222221136999999999 5666667


Q ss_pred             eeee---eeeEecCcc
Q psy7043         151 CYRF---PCRLVDTIP  163 (167)
Q Consensus       151 i~~e---pv~~v~~~~  163 (167)
                      +-+|   ||++|.+|+
T Consensus       475 L~rEVFGPVLHVvRy~  490 (769)
T COG4230         475 LQREVFGPVLHVVRYK  490 (769)
T ss_pred             HHHHhccceeEEEEec
Confidence            7777   999998885

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=99.94  E-value=3.3e-27  Score=195.31  Aligned_cols=123  Identities=18%  Similarity=0.223  Sum_probs=102.4

Q ss_pred             CceEEeecChhhh----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |++|+||||+++|    ...++|++||||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++|++|+++
T Consensus       198 v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~  276 (417)
T PRK00197        198 VDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPK  276 (417)
T ss_pred             ccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHH
Confidence            5789999999998    34689999999999999999999999999999999999999 999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee--
Q psy7043          77 FSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF--  154 (167)
Q Consensus        77 l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e--  154 (167)
                      |++++++++.+                                  ++ ++...   .+ |+ |||+   +++|++++|  
T Consensus       277 l~~~~~~~~~~----------------------------------~~-~~~~~---~~-~~-PTi~---~~~~~i~~eE~  313 (417)
T PRK00197        277 LAEALAEAGVE----------------------------------LR-GDEAA---LA-LL-PDVV---PATEEDWDTEY  313 (417)
T ss_pred             HHHHHHHCCCe----------------------------------Ee-cCHHH---HH-hh-cccc---cCCcchhhhhh
Confidence            99999987531                                  11 11110   12 33 9998   468999998  


Q ss_pred             --e---eeEecCcccccC
Q psy7043         155 --P---CRLVDTIPTYIR  167 (167)
Q Consensus       155 --p---v~~v~~~~~ai~  167 (167)
                        |   |+.+++++|||+
T Consensus       314 FGPVl~v~~~~~~deAi~  331 (417)
T PRK00197        314 LDLILAVKVVDSLDEAIA  331 (417)
T ss_pred             hCceEEEEEeCCHHHHHH
Confidence              3   666677777774

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=99.92  E-value=1.8e-25  Score=194.95  Aligned_cols=121  Identities=19%  Similarity=0.274  Sum_probs=104.9

Q ss_pred             CceEEeecChhhh----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |++|+||||++.+    +.++||++||||||||+||++|||++.|++.+++++|.| ||.|++++|+|||+++||+    
T Consensus       485 v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~----  559 (718)
T PLN02418        485 IDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN----  559 (718)
T ss_pred             CCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc----
Confidence            6899999999875    578999999999999999999999999999999999999 9999999999999999997    


Q ss_pred             HHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeeee-
Q psy7043          77 FSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRFP-  155 (167)
Q Consensus        77 l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~ep-  155 (167)
                                          |         .+..+|++|+++|+++ +||.+..   |      ++. + ++|++++|| 
T Consensus       560 --------------------G---------~~~~~i~~a~~~Ga~l-~Gg~~~~---g------~l~-~-~~~~i~~eE~  598 (718)
T PLN02418        560 --------------------G---------GLNDLLVALRSAGVTL-YGGPRAS---K------LLN-I-PEAQSFHHEY  598 (718)
T ss_pred             --------------------c---------cHHHHHHHHHHCCCEE-ECCcccc---C------eeC-C-CCchhhhCCc
Confidence                                2         3588999999999999 6776431   3      243 4 889999993 


Q ss_pred             ------eeEecCcccccC
Q psy7043         156 ------CRLVDTIPTYIR  167 (167)
Q Consensus       156 ------v~~v~~~~~ai~  167 (167)
                            |..+++++|||+
T Consensus       599 FgPv~~i~~~~~~dEAI~  616 (718)
T PLN02418        599 SSLACTVEIVDDVHAAID  616 (718)
T ss_pred             CCeeEEEEEECCHHHHHH
Confidence                  557788888874

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=99.91  E-value=2.2e-24  Score=177.26  Aligned_cols=84  Identities=15%  Similarity=0.105  Sum_probs=78.1

Q ss_pred             CceEEeecChhhh----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |++|+||||+.+|    +...+|+++|+|||||+||++|||++.|++.+++++|.+ ||.|++++|+|||+++||+|+++
T Consensus       186 v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~  264 (398)
T TIGR00407       186 IDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQR-PSTCNAIETLLVNKAIAREFLPV  264 (398)
T ss_pred             eeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcCC-CCcccccceEEEeHHHHHHHHHH
Confidence            5799999999998    345779999999999999999999999999999999965 99999999999999999999999


Q ss_pred             HHHHHHhhc
Q psy7043          77 FSEKIKLLV   85 (167)
Q Consensus        77 l~~~~~~~~   85 (167)
                      |+++++++.
T Consensus       265 l~~~~~~~~  273 (398)
T TIGR00407       265 LENQLLEKG  273 (398)
T ss_pred             HHHHHHhcC
Confidence            999998764

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=99.90  E-value=1.5e-23  Score=172.60  Aligned_cols=119  Identities=22%  Similarity=0.195  Sum_probs=100.8

Q ss_pred             CceEEeecChhhh---ccC--CCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QKT--QPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~~--~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      |++|.||||+.++   +++  .+|+++|+||+||+||++|+|++.|++.+++++|.| ||.|++++++|||++++++|++
T Consensus       182 vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~  260 (397)
T cd07077         182 IDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACASEQNLYVVDDVLDPLYE  260 (397)
T ss_pred             CCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccC-CccCCCCeEEEEehhhhHHHHH
Confidence            5789999999998   233  489999999999999999999999999999999999 9999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +|++++..                                  +|++++.|+.      ++|+.||      ++|++++| 
T Consensus       261 ~l~~~~~~----------------------------------~G~~~~~g~~------~~~~~pt------~~~~~~~~E  294 (397)
T cd07077         261 EFKLKLVV----------------------------------EGLKVPQETK------PLSKETT------PSFDDEALE  294 (397)
T ss_pred             HHHHHHHh----------------------------------cCcCcCCCce------eeEEecc------CCCChhhhh
Confidence            99998865                                  5677776653      5688887      67888877 


Q ss_pred             ---e---eeEecCccccc
Q psy7043         155 ---P---CRLVDTIPTYI  166 (167)
Q Consensus       155 ---p---v~~v~~~~~ai  166 (167)
                         |   |+.+++++++|
T Consensus       295 ~FgPvl~v~~~~~~~eai  312 (397)
T cd07077         295 SMTPLECQFRVLDVISAV  312 (397)
T ss_pred             hhCceeEEEEEcchHHHH
Confidence               4   56666665443

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=99.89  E-value=2.2e-23  Score=182.03  Aligned_cols=123  Identities=18%  Similarity=0.208  Sum_probs=98.0

Q ss_pred             CceEEeecChhhh----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |++|+||||+.+|    ..-.+|++||||||||+||++|||++.|++.+..++|.| ||.|++++|+|||++++++    
T Consensus       477 vd~I~fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~----  551 (715)
T TIGR01092       477 IDLVIPRGSNKLVSQIKKSTKIPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN----  551 (715)
T ss_pred             ccEEEEcCCHHHHHHHHHhCCCCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc----
Confidence            5789999999998    112399999999999999999999999986666666555 9999999999999999985    


Q ss_pred             HHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee--
Q psy7043          77 FSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF--  154 (167)
Q Consensus        77 l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e--  154 (167)
                                           |        .+.++++.+.++|++++ ||.+.+    .|+.   +  .+++|++++|  
T Consensus       552 ---------------------~--------~~~~~v~~~~~~Ga~l~-Gg~~~~----~~~~---~--~~~~~~i~~eE~  592 (715)
T TIGR01092       552 ---------------------G--------LLDDLIDMLRTEGVTIH-GGPRFA----AYLT---F--NISETKSFRTEY  592 (715)
T ss_pred             ---------------------h--------hHHHHHHHHHHCCCEEE-CCcchh----heec---c--CCCCchhhhccc
Confidence                                 1        26678888888999985 775431    2432   1  3678999998  


Q ss_pred             -----eeeEecCcccccC
Q psy7043         155 -----PCRLVDTIPTYIR  167 (167)
Q Consensus       155 -----pv~~v~~~~~ai~  167 (167)
                           ||+.+++++|||+
T Consensus       593 FGPvl~v~~~~~~deAi~  610 (715)
T TIGR01092       593 SSLACTVEIVDDVYDAID  610 (715)
T ss_pred             cCceEEEEEECCHHHHHH
Confidence                 3777788888874

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=99.84  E-value=5.1e-21  Score=155.85  Aligned_cols=78  Identities=32%  Similarity=0.477  Sum_probs=74.3

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||.+++       +++++|+++|+||+||+||++|+|++.+++.+++++|.++||.|++++++|||++++++|
T Consensus       172 vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f  251 (367)
T cd06534         172 VDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEF  251 (367)
T ss_pred             cCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHH
Confidence            5789999999987       466899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q psy7043          74 ISKFS   78 (167)
Q Consensus        74 ~~~l~   78 (167)
                      +++|+
T Consensus       252 ~~~l~  256 (367)
T cd06534         252 VEKLV  256 (367)
T ss_pred             HHhhc
Confidence            99998

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=99.59  E-value=1.9e-14  Score=119.56  Aligned_cols=84  Identities=10%  Similarity=0.018  Sum_probs=72.5

Q ss_pred             eEEeecChhhhc-----cCCCceeEeCCCCCe-eeEeCCC----CHHHHHHHHHHhhhhhcCCceecCcEEEEeccc---
Q psy7043           3 LFGLKNSFPVTQ-----KTQPRPKVMPREASL-NMVFESA----NIDLAIQGALASKFRNCGQTCISANRFLIHEKR---   69 (167)
Q Consensus         3 ~v~ftGs~~~g~-----~~~~~v~lElgGknp-~iV~~da----d~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i---   69 (167)
                      +|.||||..++.     ....+.+||+|||++ +|+.+++    |++.+++.+++++|.|+||.|++++++||++++   
T Consensus       196 ~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~  275 (422)
T cd07080         196 AVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEE  275 (422)
T ss_pred             EEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCch
Confidence            689999999981     112356999999955 5555558    999999999999999999999999999999999   


Q ss_pred             HHHHHHHHHHHHHhhcc
Q psy7043          70 YDEFISKFSEKIKLLVV   86 (167)
Q Consensus        70 ~~~f~~~l~~~~~~~~~   86 (167)
                      +++|.++|.++++++.-
T Consensus       276 ~~~f~~~l~~~l~~~~~  292 (422)
T cd07080         276 LREFAEALAAALERLPR  292 (422)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999998754

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=97.87  E-value=0.00011  Score=55.59  Aligned_cols=118  Identities=20%  Similarity=0.219  Sum_probs=79.6

Q ss_pred             CeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHH
Q psy7043          28 SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTK  107 (167)
Q Consensus        28 np~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~  107 (167)
                      .-+||+++.|++.|+..++.+.-..-|-  -+...|+|||++.++|+++++.+++.+.      +.     +.+...+.|
T Consensus         6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~~--~~VatVlVqEsireefi~rvr~~m~pl~------~~-----va~Hpny~r   72 (215)
T PF07368_consen    6 QLMIVFEDGDLNSAMHYLLESLHNPFAP--GAVATVLVQESIREEFIERVRSRMKPLS------PQ-----VANHPNYLR   72 (215)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHHhCcccC--CcEEEEEEeHHHHHHHHHHHHHhCccCC------hh-----hccCcHHHH
Confidence            3478999999999999999986544442  2555789999999999999999997663      11     334444555


Q ss_pred             HHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee--eeeEecCcccc
Q psy7043         108 VTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF--PCRLVDTIPTY  165 (167)
Q Consensus       108 i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e--pv~~v~~~~~a  165 (167)
                      -.+.++   .-+++.+.+.....   -..-.|.++.|++.+. +=..  .|++.-+|++.
T Consensus        73 sl~~i~---~l~~~~I~~~~~~~---~~~aSPilV~d~~h~~-fg~~PTgViTlhtFRt~  125 (215)
T PF07368_consen   73 SLKKIK---CLNAKTIVADFENV---PPPASPILVCDFTHSY-FGDGPTGVITLHTFRTP  125 (215)
T ss_pred             HHHHHH---hcCCeEEEecccCC---CCCCCCEEEcCCCHHH-cCCCCCeEEEEEccCCH
Confidence            544444   46888888743321   2334688888766431 1112  48887777654

The function of this family is unknown.

>KOG2449|consensus

Probab=97.86  E-value=4.6e-05  Score=53.50  Aligned_cols=88  Identities=22%  Similarity=0.397  Sum_probs=64.1

Q ss_pred             cHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHH-HCCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          69 RYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAI-KKGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        69 i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~-~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      ....|.+.|++..+.+++-+...+.++.     .+..+|+.++|+.-. ..|..+..-|-    ..|.|..||+|. ++|
T Consensus         7 ~aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y----a~~~f~~~tiLs-vtP   76 (157)
T KOG2449|consen    7 AAKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY----AEGNFVGPTILS-VTP   76 (157)
T ss_pred             hhhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc----ccCCcccceEEE-ecC
Confidence            3467889999999999988877788876     677788888887521 12222222222    158999999997 999


Q ss_pred             CCceeee----ee---eEecCccccc
Q psy7043         148 EMDCYRF----PC---RLVDTIPTYI  166 (167)
Q Consensus       148 ~~~i~~e----pv---~~v~~~~~ai  166 (167)
                      +|.++.|    ||   +--.++||+|
T Consensus        77 ~ms~ykeeI~gpVlv~l~~~tldd~I  102 (157)
T KOG2449|consen   77 NMSCYKEEIFGPVLVRLETETLDDAI  102 (157)
T ss_pred             CcceeHhhhhcceEEEEeecCCCcee
Confidence            9999999    43   3456777777

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=97.12  E-value=0.00047  Score=56.50  Aligned_cols=67  Identities=19%  Similarity=0.205  Sum_probs=59.8

Q ss_pred             CCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHHHHHHHhh
Q psy7043          17 QPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLL   84 (167)
Q Consensus        17 ~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~   84 (167)
                      -.||+--.-|.+.++|+.+||+|.|.+-++.++....+ .|.+...++||+.+.++|+.+|.+.+...
T Consensus       217 ~vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~  283 (417)
T COG0014         217 TVPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA  283 (417)
T ss_pred             cCCEEecCcceEEEEecccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc
Confidence            45565555699999999999999999999999998877 89999999999999999999999988753

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=96.22  E-value=0.18  Score=42.01  Aligned_cols=82  Identities=13%  Similarity=0.142  Sum_probs=60.4

Q ss_pred             eEEeecChhhh---ccCCCc--eeEeCCCC-CeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec---ccHHHH
Q psy7043           3 LFGLKNSFPVT---QKTQPR--PKVMPREA-SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE---KRYDEF   73 (167)
Q Consensus         3 ~v~ftGs~~~g---~~~~~~--v~lElgGk-np~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~---~i~~~f   73 (167)
                      ++.-+||..+-   .+..+|  -.++-|-| |-.+|..+++++.+++.+..-.+...+|-|.||+.+|+..   .-.++|
T Consensus       171 ~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~ifv~~g~~~~~~~f  250 (399)
T PF05893_consen  171 AVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVIFVETGDGDSVEEF  250 (399)
T ss_pred             EEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEEEEECCCcccHHHH
Confidence            34556777665   233333  34444554 5566777778999999999999999999999999999993   346788


Q ss_pred             HHHHHHHHHhh
Q psy7043          74 ISKFSEKIKLL   84 (167)
Q Consensus        74 ~~~l~~~~~~~   84 (167)
                      .++|.+++.+.
T Consensus       251 ~~~L~~~L~~~  261 (399)
T PF05893_consen  251 AERLAEALERA  261 (399)
T ss_pred             HHHHHHHHHHH
Confidence            88887777764

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>KOG4165|consensus

Probab=91.45  E-value=0.13  Score=41.53  Aligned_cols=64  Identities=20%  Similarity=0.217  Sum_probs=52.4

Q ss_pred             cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEeccc-----HHHHHHHHHH
Q psy7043          15 KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKR-----YDEFISKFSE   79 (167)
Q Consensus        15 ~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i-----~~~f~~~l~~   79 (167)
                      .+.+||..--.|.+.++|++|||++.|.+-+..++..+.. -|.+...+++|++.     ++.++..|++
T Consensus       210 ~tkIPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~  278 (433)
T KOG4165|consen  210 TTKIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKE  278 (433)
T ss_pred             cccCcccccccceeEEEeccccCHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHh
Confidence            4458998888999999999999999998888888888875 79999999999973     4555555443

>PF12340 DUF3638: Protein of unknown function (DUF3638); InterPro: IPR022099 This domain family is found in eukaryotes, and is approximately 230 amino acids in length

Probab=84.87  E-value=8.1  Score=29.82  Aligned_cols=86  Identities=10%  Similarity=0.200  Sum_probs=59.8

Q ss_pred             eEeCC-CCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHHHHHHHhhccCC-----CCCCCC
Q psy7043          21 KVMPR-EASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGD-----GAVSGV   94 (167)
Q Consensus        21 ~lElg-Gknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~-----~~~~~~   94 (167)
                      .|-|| ||+.+|+           -++...+.++.+    .-|++|++...++-.+.|.+++..+ ++.     |.+.++
T Consensus        47 QlnMGeGKTsVI~-----------Pmla~~LAdg~~----LvrviVpk~Ll~q~~~~L~~~lg~l-~~r~i~~lpFsR~~  110 (229)
T PF12340_consen   47 QLNMGEGKTSVIV-----------PMLALALADGSR----LVRVIVPKALLEQMRQMLRSRLGGL-LNRRIYHLPFSRST  110 (229)
T ss_pred             eecccCCccchHH-----------HHHHHHHcCCCc----EEEEEcCHHHHHHHHHHHHHHHHHH-hCCeeEEecccCCC
Confidence            44445 7887774           334444444443    4578999999988888888888776 444     344444


Q ss_pred             ccCccCCHHHHHHHHHHHHHHHHCCCEEEeCC
Q psy7043          95 NVGPLINKAQLTKVTRIVDDAIKKGAKVLLGG  126 (167)
Q Consensus        95 ~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg  126 (167)
                      .    ++....+.+.++.+++.+.|+.+++-.
T Consensus       111 ~----~~~~~~~~~~~l~~~~~~~~gill~~P  138 (229)
T PF12340_consen  111 P----LTPETLEKIRQLLEECMRSGGILLATP  138 (229)
T ss_pred             C----CCHHHHHHHHHHHHHHHHcCCEEEeCh
Confidence            3    466778889999999999888877644

There are two conserved sequence motifs: LLE and NMG.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	167
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		3e-29
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		2e-27
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		3e-26
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		2e-25
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		2e-25
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		1e-21
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		2e-21
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		4e-19
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		8e-19
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		2e-17
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		2e-16
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		4e-16
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		6e-16
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		1e-15
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		1e-15
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		3e-15
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		3e-15
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		1e-14
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		3e-14
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		3e-14
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		6e-14
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		6e-14
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		7e-14
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		7e-14
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		7e-14
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		1e-13
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		3e-13
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		5e-13
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		9e-13
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		9e-13
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		1e-12
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		2e-12
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		2e-12
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		2e-12
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		3e-12
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		3e-12
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		3e-12
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		3e-12
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		3e-12
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		3e-12
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		4e-12
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		6e-12
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		8e-12
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		2e-11
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		2e-11
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		4e-11
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		4e-11
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		6e-11
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		6e-11
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		9e-11
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		9e-11
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		1e-10
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		3e-10
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		5e-10
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		6e-10
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		7e-10
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		1e-09
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		2e-09
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-09
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-09
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		2e-09
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		1e-08
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-08
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		4e-08
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		1e-07
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		1e-07
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		1e-07
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		1e-07
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		1e-07
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		9e-07
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		1e-06
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		1e-05
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		2e-05
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		4e-05
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		4e-05
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		6e-05
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		9e-05
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-04
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		3e-04

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score =  124 bits (311), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A++D A++GA+ASK+RN GQTC+  NRF +HE+ YD F  K +  +  L VG G 
Sbjct: 265 IVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGT 324
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
            SG  +GPLIN+A + KV   + DA+ KGA ++ GGK +  +G  ++EPT++T + P+MD
Sbjct: 325 ESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH-ALGHGFFEPTVLTGVKPDMD 383
Query: 151 CYR 153
             +
Sbjct: 384 VAK 386

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 86/122 (70%), Gaps = 2/122 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
           +VF+SAN+D A+ GA+ASKFRN GQTC+ +N+FL+    +D F+  F+E +K  L VG+G
Sbjct: 266 IVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNG 325
Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN+  + KV + V+DA+ KGA V+ GGK +  +G+ ++EPTL+ ++T +M
Sbjct: 326 FEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDM 384
Query: 150 DC 151
            C
Sbjct: 385 LC 386

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKL-LVVGDG 89
           +VF+SAN+D A+ GA+ASKFRN GQT + +N+FL+    +D F+  F+E +K  L VG+G
Sbjct: 266 IVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNG 325
Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              G   GPLIN+  + KV + V+DA+ KGA V+ GGK +  +G+ ++EPTL+ ++T +M
Sbjct: 326 FEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDM 384
Query: 150 DC 151
            C
Sbjct: 385 LC 386

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A++D A++GALASKFRN GQTC+ ANR  + +  YD F  K  + +  L +GDG 
Sbjct: 262 IVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGL 321
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDI 145
            +GV +GPLI++  + KV   + DA++KGA+V+ GGK +   G  +++PT++ D+
Sbjct: 322 DNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGN-FFQPTILVDV 375

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A++D A++GALASKFRN GQTC+ ANR  + +  YD F  K  + +  L +GDG 
Sbjct: 262 IVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGL 321
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDI 145
            +GV +GPLI++  + KV   + DA++KGA+V+ GGK +   G  +++PT++ D+
Sbjct: 322 DNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGN-FFQPTILVDV 375

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 46  LASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQL 105
           + SK+RN GQTC+ ANR  +    YD+F  K + K+K L VG+G   GV +GP+I +  +
Sbjct: 300 MVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAI 359
Query: 106 TKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
           TKV   ++DA+ KGAK++ GGK    +G L++EP ++T +T +M
Sbjct: 360 TKVKAHIEDAVSKGAKLITGGKE---LGGLFFEPGILTGVTSDM 400

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/108 (41%), Positives = 66/108 (61%)
Query: 46  LASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQL 105
           +A+KFR  GQTC+ ANR  +HEK  D F  K +E++    VGDG   G+++GPLINK   
Sbjct: 279 IANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINKQGF 338
Query: 106 TKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR 153
            KV R + DA+ KGA ++ G +P      L++ PT++  +  E  CY+
Sbjct: 339 DKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREXCCYQ 386

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF  A++D A++ A    F N GQ+CI+A++  + E  YDEF+ +  E+ K  V G+  
Sbjct: 277 IVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPL 336
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
             GVN GP INKAQ  K+  +++   K+GAK+  GG P    G  + +PT+ +++T +M
Sbjct: 337 TPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKG-YFIQPTVFSNVTDDM 394

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V + A++D A + AL  +F NCGQ C    R  +H   YDEF++KF   +K L VGD  
Sbjct: 265 VVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPM 324
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTI----GELYYEPTLITDI 145
            +   +GP  N+ ++  +  IV +AIK+GA V  GGK   T+    G  +YEPT++ D+
Sbjct: 325 DADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGK-TATVEGFEGGCWYEPTVLVDV 382

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF  A++D A++ A    F + GQ CI+A+R  + E  YDEF+ +  E+ K  V+G+  
Sbjct: 277 IVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPL 336
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
             GV+ GP I+K Q  K+  +++   K+GAK+  GG P    G  + +PT+ +D+T +M
Sbjct: 337 TPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKG-YFIQPTVFSDVTDDM 394

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VFE  ++D A + A+   F   GQ C + +R ++HE    EF+++  + IK + + D  
Sbjct: 268 VVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPL 327
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGG-KPNPTIGELYYEPTLITDITPEM 149
             G  +GP++++ Q  K+ + V +A  +GA +L GG +P       + EPT+ITD+T  M
Sbjct: 328 EEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNM 387
Query: 150 DCYR 153
             +R
Sbjct: 388 QIWR 391

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V + A+++LA++  + S+  N GQ C  A R  + +  YD+F+++  E ++ +  G+ A
Sbjct: 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318
Query: 91  V-SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
             + + +GPLIN A L +V + V  A+++GA+V LGGK     G  YY PTL+ D+  EM
Sbjct: 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKG-YYYPPTLLLDVRQEM 377

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score = 80.1 bits (196), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VFE  +ID  ++  +   F   GQ C + +R L+HE    EF+ K  +  K + + D  
Sbjct: 265 VVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPF 324
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGG-KPNPTIGELYYEPTLITDITPEM 149
             G  +GP+I+K Q  K+ + +  A  +GA +L GG +P       Y EPT++TDI+  M
Sbjct: 325 EEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSM 384
Query: 150 DCYR 153
             ++
Sbjct: 385 QIWK 388

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V + A+++LA++  + S+  N GQ C  A R  + +  YD+F+++  E ++ +  G+ A
Sbjct: 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318
Query: 91  V-SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
             + + +GPLIN A L +V + V  A+++GA+V  GGK     G  YY PTL+ D+  EM
Sbjct: 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKG-YYYPPTLLLDVRQEM 377

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V + A+++LA++  + S+  N GQ C  A R  + +  YD+F+++  E ++ +  G+ A
Sbjct: 259 IVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPA 318
Query: 91  V-SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
             + + +GPLIN A L +V + V  A+++GA+V  GGK     G  YY PTL+ D+  EM
Sbjct: 319 ERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKG-YYYPPTLLLDVRQEM 377

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+  +ID A++  L   F   GQ C + +R LIH K   +F  +     K + V D  
Sbjct: 285 VVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPL 344
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGG-KPNPTIGELYYEPTLITDITPEM 149
             G  +GP++++ Q  K+ + + +A  +GA +L GG +P       + EPT+ITDIT  M
Sbjct: 345 EEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSM 404
Query: 150 DCYR 153
           + +R
Sbjct: 405 EIWR 408

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A+I+ A+ GA+   F + GQ C +  R  + +K    F+     + + +++GD  
Sbjct: 266 IVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPL 325
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK-PNPTIGE-LYYEPTLITDITPE 148
               ++GPL++KAQ  KV   ++    +GA ++ GG  PN   GE  Y +PT+  D+T +
Sbjct: 326 DYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDD 385
Query: 149 MDCYR 153
           M   R
Sbjct: 386 MTIAR 390

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++F  A++D A++ A    F N GQ C + +R  + E  Y+EF+ +  E+ K  +VG
Sbjct: 272 SPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVG 331
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
                    GP I+K Q  K+  ++   + +GAK+  GGK     G  + EPT+ +++T 
Sbjct: 332 SPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKG-FFIEPTVFSNVTD 390
Query: 148 EM 149
           +M
Sbjct: 391 DM 392

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 56/96 (58%)
Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   A++D A+  A+  KF + GQ C+  NR ++H+  YDEF+ KF+ ++K L  GD   
Sbjct: 262 VLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321
Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK 127
               VGPLIN+ Q+ K   I++ A   G ++ + GK
Sbjct: 322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK 357

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VFE  ++D   +  +   F   GQ C + +R ++HE    EF+ K  +  + + + D  
Sbjct: 268 VVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPL 327
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDITPEM 149
             G  +GP++++AQ  KV   +  A  +GA +L GG+    + + Y+ EPT+ITD+T  M
Sbjct: 328 EEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSM 387
Query: 150 DCYR 153
             +R
Sbjct: 388 QIWR 391

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
           N++F  A+ID A+Q  +   F N GQ+C +  R L+ +  YD+ I    +  +   VG G
Sbjct: 277 NIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPG 335
Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGE--LYYEPTLITDITP 147
             +G ++GP+++K Q  K+  ++   I +GA ++ GG   P   E   Y  PT+  D+ P
Sbjct: 336 HQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKP 395
Query: 148 EMDCYR 153
            M  +R
Sbjct: 396 HMRIFR 401

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V   A+++LA++ A+A +++N GQ C +A RF++ E     F  +F      L  GD  
Sbjct: 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPL 301
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
           V   ++GP        ++ + V  ++ +GA++LLGG+     G  YY  T++ D+TP+  
Sbjct: 302 VEENDLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGN-YYAATVLADVTPDXT 360
Query: 151 CYR 153
            +R
Sbjct: 361 AFR 363

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 73.2 bits (178), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F   +++ A+Q  ++S F N G+ CI+A R  + E  +++F+ K  E+++ + +G+  
Sbjct: 296 IIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               N GP  ++A L K+       +K+GA ++ GG   P  G  +++PT+ TD+   M
Sbjct: 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPG-FFFQPTVFTDVEDHM 413

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 73.2 bits (178), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F   +++ A+Q  ++S F N G+ CI+A R  + E  +++F+ K  E+++ + +G+  
Sbjct: 296 IIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               N GP  ++A L K+       +K+GA ++ GG   P  G  +++PT+ TD+   M
Sbjct: 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPG-FFFQPTVFTDVEDHM 413

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 73.2 bits (178), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F   +++ A+Q  ++S F N G+ CI+A R  + E  +++F+ K  E+++ + +G+  
Sbjct: 296 IIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               N GP  ++A L K+       +K+GA ++ GG   P  G  +++PT+ TD+   M
Sbjct: 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPG-FFFQPTVFTDVEDHM 413

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F+   ++ A++GAL + F   GQ C +  R  +  +   +F+ +  ++ K +VVGD  
Sbjct: 271 LIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPL 330
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKP----NPTIGELYY-EPTLITDI 145
           ++   +G LI+K QL KV   V  A K+GA+VL GG+P    +P +   Y+  P ++ + 
Sbjct: 331 LTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNC 390
Query: 146 TPEMDCYR 153
             +M C +
Sbjct: 391 RDDMTCVK 398

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
           N+V + A+++ A+   +   F   GQ CIS    L+ E   D+FI  F  K K+L VG+ 
Sbjct: 248 NIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNP 307
Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                +VGPLI+      V ++V+ AI +G K+LLGGK +     L+Y PT++     E+
Sbjct: 308 LDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKA---LFY-PTIL-----EV 358
Query: 150 DCYRFPCR 157
           D     C+
Sbjct: 359 DRDNILCK 366

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 50  FRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVT 109
           F + GQ C+S NR ++    +DEF+ KF E +K +  GD +  G  VGP+IN +QL+ + 
Sbjct: 287 FLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLK 346
Query: 110 RIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR 153
             ++ A K+GA V + G   P  G L + P + +D+T +M+  R
Sbjct: 347 EKIELAKKEGATVQVEG---PIEGRLVH-PHVFSDVTSDMEIAR 386

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F   +++ A+Q  ++S F N G+  I+A R  + E  +++F+ K  E+++ + +G+  
Sbjct: 296 IIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               N GP  ++A L K+       +K+GA ++ GG   P  G  +++PT+ TD+   M
Sbjct: 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPG-FFFQPTVFTDVEDHM 413

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F   +++ A+Q  ++S F N G+  I+A R  + E  +++F+ K  E+++ + +G+  
Sbjct: 296 IIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               N GP  ++A L K+       +K+GA ++ GG   P  G  +++PT+ TD+   M
Sbjct: 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPG-FFFQPTVFTDVEDHM 413

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F   +++ A+Q  ++S F N G+  I+A R  + E  +++F+ K  E+++ + +G+  
Sbjct: 296 IIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPL 355
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               N GP  ++A L K+       +K+GA ++ GG   P  G  +++PT+ TD+   M
Sbjct: 356 ERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPG-FFFQPTVFTDVEDHM 413

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ+C + +R  + E  YDEF+ +   + K  VVG
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 391
Query: 148 EM 149
            M
Sbjct: 392 GM 393

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 37  NIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNV 96
           N+D+A +  L   F N GQ C + +R ++ E     F+ +  +  K + + D       +
Sbjct: 288 NLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKL 347
Query: 97  GPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDITPEMDCYR 153
           GP+++  Q  KV + + +A  +GA +L GG+    + + YY +PT+ITD+   M+ ++
Sbjct: 348 GPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWK 405

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 37  NIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNV 96
           N+D+A +  L   F N GQ C + +R ++ E     F+ +  +  K + + D       +
Sbjct: 288 NLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEEDCKL 347
Query: 97  GPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDITPEMDCYR 153
           GP+++  Q  KV + + +A  +GA +L GG+    + + YY +PT+ITD+   M+ ++
Sbjct: 348 GPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEIWK 405

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ C + +R  + E  YDEF+ +   + K  VVG
Sbjct: 267 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 326
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 327 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 385
Query: 148 EM 149
            M
Sbjct: 386 GM 387

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ C + +R  + E  YDEF+ +   + K  VVG
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 391
Query: 148 EM 149
            M
Sbjct: 392 GM 393

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ C + +R  + E  YDEF+ +   + K  VVG
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 391
Query: 148 EM 149
            M
Sbjct: 392 GM 393

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ C + +R  + E  YDEF+ +   + K  VVG
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 391
Query: 148 EM 149
            M
Sbjct: 392 GM 393

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ C + +R  + E  YDEF+ +   + K  VVG
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 391
Query: 148 EM 149
            M
Sbjct: 392 GM 393

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 59/115 (51%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V ESAN++LA    L     N GQ+C+S  R  + E +++EF  +   K   L +    
Sbjct: 240 IVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPL 299
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDI 145
           V    +GP+I + Q   +   + DA++KGA +  GGK     G  +  PT+ T++
Sbjct: 300 VEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNV 354

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
           N++F+ A+ +LA+  AL   + + GQ C + +R L+     D+F     +++K + +G+G
Sbjct: 286 NIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNG 345
Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK---PNPTIGELYYEPTLITDIT 146
             +   +GP+I+     K+   +D A  +GA + +GGK    +     L++EPT+IT+  
Sbjct: 346 FDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCD 405
Query: 147 PEM 149
             M
Sbjct: 406 TSM 408

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V   A++DLA +  L S F   GQ C + +R +IH+  YDE + K     K L VGD  
Sbjct: 295 VVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPT 354
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPE 148
                +GP+I++    K+   ++   K+G +++ GG+ + + G  + +PT+I D+ PE
Sbjct: 355 NRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTG-FFIQPTIIADLDPE 410

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E  +I+LA Q    S F   GQ C + +R ++HEK YDE + +  E  +   VG+  
Sbjct: 295 VVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVGEPD 354
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
            + V +GP+I++A   K+   ++   ++G +++ GGK + + G  + EPT+  D+ P
Sbjct: 355 SADVYMGPVIDQASFNKIMDYIEIGKEEG-RLVSGGKGDDSKG-YFIEPTIFADLDP 409

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  ++ E  ++  AI   + S   N GQ C++  R L    RYDE ++  +  +  L VG
Sbjct: 259 SAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVG 318
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLL-GGKPNPTIGELYYEPTLITDIT 146
             +     +GPLI++ Q T+V   +   I++GA+++  GG+P       + +PT+  D+ 
Sbjct: 319 PPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVD 378
Query: 147 PEM 149
            +M
Sbjct: 379 NKM 381

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 66/123 (53%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V   AN++  +   + + F + G+ C++     + E   DEF++K  EK+  + +G+G 
Sbjct: 257 IVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGL 316
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             GV +GP+I +    +    ++  +++GA+++  G+ N +    +  PT+  ++T EM 
Sbjct: 317 DDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMT 376
Query: 151 CYR 153
            ++
Sbjct: 377 IWK 379

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ   + +R  + E  YDEF+ +   + K  VVG
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 391
Query: 148 EM 149
            M
Sbjct: 392 GM 393

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ   + +R  + E  YDEF+ +   + K  VVG
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 391
Query: 148 EM 149
            M
Sbjct: 392 GM 393

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           + FE A++ L +  AL +     GQ C +A R  IHE  +DE +++  +    + VG+  
Sbjct: 277 IAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPW 336
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDI 145
              V  GPL  K  ++     V++A K+G  V+ GGK     G  Y EPT++T +
Sbjct: 337 DPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGN-YVEPTIVTGL 390

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ   + +R  + E  YDEF+ +   + K  VVG
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 391
Query: 148 EM 149
            M
Sbjct: 392 GM 393

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A++DLA        +   GQ C +    L     Y + + + ++++  L VGD  
Sbjct: 271 IVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLI---TDITP 147
              V+VGPLI+ + + ++   ++DA++KG +VL GG+    +G  Y +PTL+    D   
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR---RLGPTYVQPTLVEAPADRVK 387
Query: 148 EMDCYR 153
           +M  Y+
Sbjct: 388 DMVLYK 393

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A++DLA        +   GQ C +    L     Y + + + ++++  L VGD  
Sbjct: 271 IVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLI---TDITP 147
              V+VGPLI+ + + ++   ++DA++KG +VL GG+    +G  Y +PTL+    D   
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR---RLGPTYVQPTLVEAPADRVK 387
Query: 148 EMDCYR 153
           +M  Y+
Sbjct: 388 DMVLYK 393

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ C + +R  + E  Y EF+ +   + K  VVG
Sbjct: 272 SPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVG 331
Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  KV   +    ++G K+L GG      G  + +PT+  D+  
Sbjct: 332 NPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRG-YFIQPTVFGDLQD 390
Query: 148 EM 149
            M
Sbjct: 391 GM 392

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A++DLA        +   GQ C +    L     Y + + + ++++  L VGD  
Sbjct: 271 IVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 330
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLI---TDITP 147
              V+VGPLI+ + + ++   ++DA++KG +VL GG+    +G  Y +PT +    D   
Sbjct: 331 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR---RLGPTYVQPTFVEAPADRVK 387
Query: 148 EMDCYR 153
           +M  Y+
Sbjct: 388 DMVLYK 393

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/123 (31%), Positives = 58/123 (47%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF  A++D A  G     + N GQ CIS +R L+ E   D    +  +  + +  GD  
Sbjct: 278 IVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGDPL 337
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
                +G  I++A   KV   V   I  GA++LLGG+       LYY PT+   +TP+  
Sbjct: 338 NERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDXS 397
Query: 151 CYR 153
             R
Sbjct: 398 IAR 400

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 56/97 (57%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF  A+++ A+   +   F   G+ C +++R L+ EK +++F+ K  E+ + + VG   
Sbjct: 279 LVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPL 338
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK 127
                VGPLI+   L +V   V+   ++GA++L+GG+
Sbjct: 339 DPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGE 375

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VFE A+++L +  A+ +     GQ C +  R ++HE  +D  + + ++  K + +GD  
Sbjct: 275 IVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDPW 334
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDI 145
                 GPL  K  + +    ++ A ++G  ++ GGK     G  Y EPT+IT +
Sbjct: 335 DPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGN-YVEPTIITGL 388

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V +  +I  A +        N GQ C +  R L+  K  D F+++  E+   + VG+  
Sbjct: 256 IVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPR 315
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLG--GKPNPTIGELYYEPTLITDI 145
             G  VGP+I+K Q  +V   ++  I++GA++  G  GKP       +  PT+  ++
Sbjct: 316 EDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINV 372

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F  A++D A   A+ + F + GQ C +  R  IH  +   F +K  E+++ + +GD  
Sbjct: 259 IIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK--PNPTIGE-LYYEPTLITDITP 147
               N GPL++   +  V   ++    + A++L GG+   +   G+  Y  PT+ TD   
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 148 EMDCYR 153
           +M   R
Sbjct: 379 DMTIVR 384

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F  A++D A   A+ + F + GQ C +  R  IH  +   F +K  E+++ + +GD  
Sbjct: 259 IIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 318
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK--PNPTIGE-LYYEPTLITDITP 147
               N GPL++   +  V   ++    + A++L GG+   +   G+  Y  PT+ TD   
Sbjct: 319 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 378
Query: 148 EMDCYR 153
           +M   R
Sbjct: 379 DMTIVR 384

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F  A++D A   A+ + F + GQ C +  R  IH  +   F +K  E+++ + +GD  
Sbjct: 260 IIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK--PNPTIGE-LYYEPTLITDITP 147
               N GPL++   +  V   ++    + A++L GG+   +   G+  Y  PT+ TD   
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 148 EMDCYR 153
           +M   R
Sbjct: 380 DMTIVR 385

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +VF+ A+I+  ++G     + N GQ C +A R    +  YD  + K    +  L  G   
Sbjct: 275 IVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPD 334
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGA-KVLLGGKPNPTIGELYYEPTLIT 143
                +GPL + A L +V + V++A   G  KV+ GG+     G  YY PTL+ 
Sbjct: 335 DESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG-YYYAPTLLA 387

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V + A++ L     ++  F   GQ C +  R  + +   D+ ++   E ++ L VG   
Sbjct: 267 IVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS-P 325
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               ++ P+I++     +  ++DDA++ GA +L G K    +      PTL+ D+TP M
Sbjct: 326 EDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNL----LSPTLLDDVTPAM 380

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F  A++D A   A+ + F + GQ   +  R  IH  +   F +K  E+++ + +GD  
Sbjct: 260 IIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK--PNPTIGE-LYYEPTLITDITP 147
               N GPL++   +  V   ++    + A++L GG+   +   G+  Y  PT+ TD   
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 148 EMDCYR 153
           +M   R
Sbjct: 380 DMTIVR 385

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           ++F  A++D A   A+ + F + GQ   +  R  IH  +   F +K  E+++ + +GD  
Sbjct: 260 IIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQ 319
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK--PNPTIGE-LYYEPTLITDITP 147
               N GPL++   +  V   ++    + A++L GG+   +   G+  Y  PT+ TD   
Sbjct: 320 DENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRD 379
Query: 148 EMDCYR 153
           +M   R
Sbjct: 380 DMTIVR 385

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E+A+ DLA +G + S +   GQ C +A+R ++ +  Y+  + +  ++ + L VG  A
Sbjct: 296 IVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGP-A 354
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDITPE 148
               ++GP+++  Q  KV   ++    +G +++LGGK     GE Y+  PT+ T++ P+
Sbjct: 355 EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGK--RLEGEGYFIAPTVFTEVPPK 410

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E+A+ DLA +G + S +   GQ C +A+R ++ +  Y+  + +  ++ + L VG  A
Sbjct: 296 IVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGP-A 354
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDITPE 148
               ++GP+++  Q  KV   ++    +G +++LGGK     GE Y+  PT+ T++ P+
Sbjct: 355 EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGK--RLEGEGYFIAPTVFTEVPPK 410

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A+++L  +  +A  F   GQ C +  R L+ E   DE + K  EK+  L +G+  
Sbjct: 258 IVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN-P 316
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVL 123
               ++ PLI+      V  +++DA  KGA  L
Sbjct: 317 EDDADITPLIDTKSADYVEGLINDANDKGATAL 349

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A+++L  +  +A  F   GQ C +  R L+ E   DE + K  EK+  L +G+  
Sbjct: 258 IVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN-P 316
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVL 123
               ++ PLI+      V  +++DA  KGA  L
Sbjct: 317 EDDADITPLIDTKSADYVEGLINDANDKGATAL 349

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A+++L  +  +A  F   GQ C +  R L+ E   DE + K  EK+  L +G+  
Sbjct: 258 IVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN-P 316
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVL 123
               ++ PLI+      V  +++DA  KGA  L
Sbjct: 317 EDDADITPLIDTKSADYVEGLINDANDKGATAL 349

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 28/174 (16%)
Query: 19  RPKVMPREA------SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE 72
           R +  PR A      + + V  SA++D  + G L S F   GQ C + +R  + +  + +
Sbjct: 304 RFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQ 363
Query: 73  FISKFSEKIKLLVVGDGAVS-GVNVGPLINKAQLTKVTRIVDDAIKKGA-KVLLGGKPNP 130
              +  E+   + VGD A   G     +I+     ++ + ++ A    +  +L GG+ N 
Sbjct: 364 IKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNE 423
Query: 131 TIGELYYEPTLITDITPEM-------------------DCYRFPCRLVDTIPTY 165
           ++G  Y EP +I    P+                    D YR   +LVD+  +Y
Sbjct: 424 SVG-YYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSY 476

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V E A+++L  +  +A  F   GQ   +  R L+ E   DE + K  EK+  L +G+  
Sbjct: 258 IVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELVEKIREKVLALTIGN-P 316
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVL 123
               ++ PLI+      V  +++DA  KGA  L
Sbjct: 317 EDDADITPLIDTKSADYVEGLINDANDKGATAL 349

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 52  NCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRI 111
           N GQ C S+ R ++ + RYDE + +       L  GD   +   + P  ++    K+   
Sbjct: 260 NDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQ 319
Query: 112 VDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPE 148
           V +AI  GAKV     P       ++ PT++TDI  +
Sbjct: 320 VKEAIDAGAKVFY-QYPEIDSKGAFFRPTILTDIAKD 355

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGA 90
           +V+  A+++  + G     + N GQ C +A R       Y++ ++  +  +  +      
Sbjct: 277 IVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDD 336
Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAI-KKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
            +   +GPLI++ Q  +V   V+ A  +K  ++  GG+     G  +++PT++   T E 
Sbjct: 337 DTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEG-FFFQPTVVAGATQED 395
Query: 150 DCYR 153
           +  R
Sbjct: 396 EIVR 399

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V ++ ++D+A +     KF N GQTC++ +  L      ++ + K  + +K    G+ A 
Sbjct: 235 VDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAK 293
Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPE 148
              + G +I+     +V  +++     G KV  GG  +      Y  PT++TD+ P+
Sbjct: 294 KSRDYGRIISARHFQRVMGLIE-----GQKVAYGGTGDAAT--RYIAPTILTDVDPQ 343

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V +  ++D+A +     KF N GQTC++ +  L      ++ + K  + +K    G+ A 
Sbjct: 218 VDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAK 276
Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPE 148
              + G +IN     +V  ++D+      KV  GG  + +    Y  PT++ D+ P+
Sbjct: 277 QSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTWDQS--SRYIAPTILVDVDPQ 326

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 31  MVFESANIDLAIQGALASKFRNCGQTCISANRFL-IHEKRYDEFISKFSEKIKLLVVGDG 89
           ++   A++D A    + + + + G+ C + +  + + E+  +  I K    ++ L +G  
Sbjct: 278 IIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIGPY 337
Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEP------TLIT 143
                + GP++ K    ++  ++D  I++GAK+++ G+     G   YE        L  
Sbjct: 338 TDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQG---YENGHFIGGCLFD 394
Query: 144 DITPEMDCYR 153
           D+TP+ D Y+
Sbjct: 395 DVTPDXDIYK 404

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           + + V  SA+++  + G L S F   GQ C + +R  +    + +   +  E+   + VG
Sbjct: 322 NFHFVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVG 381
Query: 88  DGAVS-GVNVGPLINKAQLTKVTRIVDDAIKKGA-KVLLGGKPNPTIGELYYEPTLITDI 145
           D A   G     +I+     ++ + ++ A    +  +L GGK + ++G  + EP ++   
Sbjct: 382 DPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVG-YFVEPCIVESK 440
Query: 146 TPE 148
            P+
Sbjct: 441 DPQ 443

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           + + V  SA+++  + G L S F   GQ C +  R  +    + +   +  E+   + VG
Sbjct: 322 NFHFVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVG 381
Query: 88  DGAVS-GVNVGPLINKAQLTKVTRIVDDAIKKGA-KVLLGGKPNPTIGELYYEPTLITDI 145
           D A   G     +I+     ++ + ++ A    +  +L GGK + ++G  + EP ++   
Sbjct: 382 DPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVG-YFVEPCIVESK 440
Query: 146 TPE 148
            P+
Sbjct: 441 DPQ 443

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           + + V  SA+++  + G L S F   GQ C +  R  +    + +   +  E+   + VG
Sbjct: 322 NFHFVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVG 381
Query: 88  DGAVS-GVNVGPLINKAQLTKVTRIVDDAIKKGA-KVLLGGKPNPTIGELYYEPTLITDI 145
           D A   G     +I+     ++ + ++ A    +  +L GGK + ++G  + EP ++   
Sbjct: 382 DPAEDFGTFFSAVIDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVG-YFVEPCIVESK 440
Query: 146 TPE 148
            P+
Sbjct: 441 DPQ 443

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	167
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	7e-60
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	1e-59
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	2e-59
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	3e-59
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	1e-58
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	1e-58
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	4e-57
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	7e-56
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	4e-54
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	7e-54
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	3e-53
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	6e-53
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	6e-53
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	8e-53
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	3e-52
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	3e-50
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	2e-43
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	2e-36
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	2e-36
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	9e-36
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	2e-35
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	3e-35
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	4e-35
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	7e-35
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	8e-35
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	1e-34
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	1e-34
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	1e-34
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	3e-34
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	1e-33
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	6e-33
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	2e-32
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	2e-32
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	3e-32
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	4e-30
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	1e-25
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	1e-23
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	2e-22
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	4e-22
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	3e-19
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	4e-19
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	2e-18
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	7e-18
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	1e-16
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	1e-14
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	4e-13

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  192 bits (490), Expect = 7e-60
 Identities = 50/122 (40%), Positives = 76/122 (62%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           VF+ A+++ A    +A+KFR  GQTC+ ANR  +HEK  D F  K +E++  + VGDG  
Sbjct: 265 VFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
            G+++GPLINK    KV R + DA+ KGA ++ G +P      L++ PT++  +  EM C
Sbjct: 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCC 384

Query: 152 YR 153
           Y+
Sbjct: 385 YQ 386

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  191 bits (488), Expect = 1e-59
 Identities = 50/122 (40%), Positives = 78/122 (63%), Gaps = 1/122 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           VF+ A++D A++GALASKFRN GQTC+ ANR  + +  YD F  K  + +  L +GDG  
Sbjct: 263 VFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLD 322

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
           +GV +GPLI++  + KV   + DA++KGA+V+ GGK     G  +++PT++ D+      
Sbjct: 323 NGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA-HERGGNFFQPTILVDVPANAKV 381

Query: 152 YR 153
            +
Sbjct: 382 SK 383

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  190 bits (486), Expect = 2e-59
 Identities = 55/122 (45%), Positives = 82/122 (67%), Gaps = 1/122 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           VF+ A++D A++GA+ASK+RN GQTC+  NRF +HE+ YD F  K +  +  L VG G  
Sbjct: 266 VFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTE 325

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
           SG  +GPLIN+A + KV   + DA+ KGA ++ GGK    +G  ++EPT++T + P+MD 
Sbjct: 326 SGATLGPLINEAAVKKVESHIADALAKGASLMTGGKR-HALGHGFFEPTVLTGVKPDMDV 384

Query: 152 YR 153
            +
Sbjct: 385 AK 386

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  190 bits (486), Expect = 3e-59
 Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A++D A + AL  +F NCGQ C    R  +H   YDEF++KF   +K L VGD   
Sbjct: 266 VMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMD 325

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP---TIGELYYEPTLITDITPE 148
           +   +GP  N+ ++  +  IV +AIK+GA V  GGK        G  +YEPT++ D+  +
Sbjct: 326 ADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQD 385

Query: 149 MDCYR 153
                
Sbjct: 386 NIVVH 390

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  188 bits (481), Expect = 1e-58
 Identities = 52/122 (42%), Positives = 81/122 (66%), Gaps = 3/122 (2%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           VF+ A++D A+ GA+ SK+RN GQTC+ ANR  +    YD+F  K + K+K L VG+G  
Sbjct: 286 VFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTE 345

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
            GV +GP+I +  +TKV   ++DA+ KGAK++ GGK    +G L++EP ++T +T +M  
Sbjct: 346 PGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE---LGGLFFEPGILTGVTSDMLV 402

Query: 152 YR 153
            +
Sbjct: 403 AK 404

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  188 bits (480), Expect = 1e-58
 Identities = 57/123 (46%), Positives = 84/123 (68%), Gaps = 2/123 (1%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKI-KLLVVGDGA 90
           VF+SAN+D A+ GA+ASKFRN GQTC+ +N+FL+    +D F+  F+E + K L VG+G 
Sbjct: 267 VFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326

Query: 91  VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
             G   GPLIN+  + KV + V+DA+ KGA V+ GGK    +G+ ++EPTL+ ++T +M 
Sbjct: 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR-HQLGKNFFEPTLLCNVTQDML 385

Query: 151 CYR 153
           C  
Sbjct: 386 CTH 388

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  184 bits (470), Expect = 4e-57
 Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 2/123 (1%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A+++LA++  + S+  N GQ C  A R  + +  YD+F+++  E ++ +  G+ A 
Sbjct: 260 VMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAE 319

Query: 92  SG-VNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD 150
              + +GPLIN A L +V + V  A+++GA+V  GGK        YY PTL+ D+  EM 
Sbjct: 320 RNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKA-VEGKGYYYPPTLLLDVRQEMS 378

Query: 151 CYR 153
              
Sbjct: 379 IMH 381

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  181 bits (462), Expect = 7e-56
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 4/122 (3%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   A++D A+  A+  KF + GQ C+  NR ++H+  YDEF+ KF+ ++K L  GD   
Sbjct: 262 VLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
               VGPLIN+ Q+ K   I++ A   G ++ + GK           P +          
Sbjct: 322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGN----VLTPYVFVGADNNSKI 377

Query: 152 YR 153
            +
Sbjct: 378 AQ 379

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  176 bits (450), Expect = 4e-54
 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 1/122 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V + A+  +       ++  N GQ C S+ R ++ + RYDE + +       L  GD   
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLE 299

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
           +   + P+ ++    K+   V +AI  GAKV        + G  ++ PT++TDI  +   
Sbjct: 300 ADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKG-AFFRPTILTDIAKDNPV 358

Query: 152 YR 153
           + 
Sbjct: 359 FD 360

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  175 bits (447), Expect = 7e-54
 Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 1/122 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   A+++LA++ A+A +++N GQ C +A RF++ E     F  +F      L +GD  V
Sbjct: 243 VLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLV 302

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
              ++GP+       ++ + V  ++ +GA++LLGG+     G  YY  T++ D+TP+M  
Sbjct: 303 EENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEG-NYYAATVLADVTPDMTA 361

Query: 152 YR 153
           +R
Sbjct: 362 FR 363

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  174 bits (444), Expect = 3e-53
 Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 5/124 (4%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
           N+V + A+++ A+   +   F   GQ CIS    L+ E   D+FI  F  K K+L VG+ 
Sbjct: 248 NIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNP 307

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                +VGPLI+      V ++V+ AI +G K+LLGGK +       + PT++ ++  + 
Sbjct: 308 LDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKA----LFYPTIL-EVDRDN 362

Query: 150 DCYR 153
              +
Sbjct: 363 ILCK 366

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  173 bits (442), Expect = 6e-53
 Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 5/122 (4%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V E A+++L  +  +A  F   GQ C +  R L+ E   DE + K  EK+  L +G+   
Sbjct: 259 VLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNP-E 317

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
              ++ PLI+      V  +++DA  KGA  L   K           P L   +T +M  
Sbjct: 318 DDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGN----LICPILFDKVTTDMRL 373

Query: 152 YR 153
             
Sbjct: 374 AW 375

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  174 bits (443), Expect = 6e-53
 Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 6/127 (4%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V E A++DLA        +   GQ C +    L     Y + + + ++++  L VGD 
Sbjct: 270 AIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLI---TDIT 146
               V+VGPLI+ + + ++   ++DA++KG +VL GG+    +G  Y +PT +    D  
Sbjct: 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRV 386

Query: 147 PEMDCYR 153
            +M  Y+
Sbjct: 387 KDMVLYK 393

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  173 bits (442), Expect = 8e-53
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 5/124 (4%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V + A++ L     ++  F   GQ C +  R  + +   D+ ++   E ++ L VG  
Sbjct: 266 AIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSP 325

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                ++ P+I++     +  ++DDA++ GA +L G K           PTL+ D+TP M
Sbjct: 326 -EDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGN----LLSPTLLDDVTPAM 380

Query: 150 DCYR 153
               
Sbjct: 381 RVAW 384

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  172 bits (439), Expect = 3e-52
 Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 4/124 (3%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V   A+ID A Q A    F + GQ C+S NR ++    +DEF+ KF E +K +  GD 
Sbjct: 267 FVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDP 326

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
           +  G  VGP+IN +QL+ +   ++ A K+GA V + G            P + +D+T +M
Sbjct: 327 SAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGR----LVHPHVFSDVTSDM 382

Query: 150 DCYR 153
           +  R
Sbjct: 383 EIAR 386

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  167 bits (425), Expect = 3e-50
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 1/122 (0%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
            FE A++ L +  AL +     GQ C +A R  IHE  +DE +++  +    + VG+   
Sbjct: 278 AFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWD 337

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
             V  GPL  K  ++     V++A K+G  V+ GGK        Y EPT++T +  +   
Sbjct: 338 PNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKV-MDRPGNYVEPTIVTGLGHDASI 396

Query: 152 YR 153
             
Sbjct: 397 AH 398

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  148 bits (377), Expect = 2e-43
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 4/126 (3%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY-DEFISKFSEKIKLLVVGD 88
            +V E A++D A+   + S F + GQ C  A R L+ +  + D  +++       L VG 
Sbjct: 255 LVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGR 314

Query: 89  G-AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
                   +G +I+ +    + +  +  I KGA+ LL     P  G     P ++ D++ 
Sbjct: 315 FDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQ-PIDGAALLTPGIL-DVSA 372

Query: 148 EMDCYR 153
             +   
Sbjct: 373 VAERPD 378

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  130 bits (329), Expect = 2e-36
 Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 1/127 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  +VFE  ++D A + A+   F   GQ C + +R ++HE    EF+++  + IK + + 
Sbjct: 265 SPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKIS 324

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGE-LYYEPTLITDIT 146
           D    G  +GP++++ Q  K+ + V +A  +GA +L GG     + +  + EPT+ITD+T
Sbjct: 325 DPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVT 384

Query: 147 PEMDCYR 153
             M  +R
Sbjct: 385 TNMQIWR 391

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  130 bits (329), Expect = 2e-36
 Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 5/130 (3%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           + N++F+ A+ +LA+  AL   + + GQ C + +R L+     D+F     +++K + +G
Sbjct: 284 NPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLG 343

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL----YYEPTLIT 143
           +G  +   +GP+I+     K+   +D A  +GA + +GGK  P   +L    ++EPT+IT
Sbjct: 344 NGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKR-PDRDDLKDGLFFEPTVIT 402

Query: 144 DITPEMDCYR 153
           +    M   +
Sbjct: 403 NCDTSMRIVQ 412

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  128 bits (325), Expect = 9e-36
 Identities = 40/126 (31%), Positives = 61/126 (48%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
              +VF  A++D A  G     + N GQ CIS +R L+ E   D  + +  +  + +  G
Sbjct: 275 GPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFG 334

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           D       +G +I++A   KV   V   I  GA++LLGG+       LYY PT+   +TP
Sbjct: 335 DPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTP 394

Query: 148 EMDCYR 153
           +M   R
Sbjct: 395 DMSIAR 400

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  128 bits (323), Expect = 2e-35
 Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 2/128 (1%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  +VF+ A+I+ A+ GA+   F + GQ C +  R  + +K    F+     + + +++G
Sbjct: 263 SPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGE--LYYEPTLITDI 145
           D      ++GPL++KAQ  KV   ++    +GA ++ GG     +     Y +PT+  D+
Sbjct: 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADV 382

Query: 146 TPEMDCYR 153
           T +M   R
Sbjct: 383 TDDMTIAR 390

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  127 bits (321), Expect = 3e-35
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  ++F+   ++ A++GAL + F   GQ C +  R  +  +   +F+ +  ++ K +VVG
Sbjct: 268 SPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVG 327

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL-----YYEPTLI 142
           D  ++   +G LI+K QL KV   V  A K+GA+VL GG+P            +  P ++
Sbjct: 328 DPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVL 387

Query: 143 TDITPEMDCYR 153
            +   +M C +
Sbjct: 388 DNCRDDMTCVK 398

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  126 bits (320), Expect = 4e-35
 Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 1/122 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  +VF  A++D A++ A    F + GQ CI+A+R  + E  YDEF+ +  E+ K  V+G
Sbjct: 274 SPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 333

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +    GV+ GP I+K Q  K+  +++   K+GAK+  GG P    G  + +PT+ +D+T 
Sbjct: 334 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKG-YFIQPTVFSDVTD 392

Query: 148 EM 149
           +M
Sbjct: 393 DM 394

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  126 bits (318), Expect = 7e-35
 Identities = 35/122 (28%), Positives = 68/122 (55%), Gaps = 1/122 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  ++F   +++ A+Q  ++S F N G+ CI+A R  + E  +++F+ K  E+++ + +G
Sbjct: 293 SPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIG 352

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +      N GP  ++A L K+       +K+GA ++ GG   P  G  +++PT+ TD+  
Sbjct: 353 NPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPG-FFFQPTVFTDVED 411

Query: 148 EM 149
            M
Sbjct: 412 HM 413

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  125 bits (317), Expect = 8e-35
 Identities = 26/125 (20%), Positives = 57/125 (45%), Gaps = 2/125 (1%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V+  A+++  + G     + N GQ C +A R       Y++ ++  +  +  +     
Sbjct: 276 VIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLD 335

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKG-AKVLLGGKPNPTIGELYYEPTLITDITPE 148
             +   +GPLI++ Q  +V   V+ A  +   ++  GG+     G  +++PT++   T E
Sbjct: 336 DDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEG-FFFQPTVVAGATQE 394

Query: 149 MDCYR 153
            +  R
Sbjct: 395 DEIVR 399

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  125 bits (317), Expect = 1e-34
 Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 1/122 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ   + +R  + E  YDEF+ +   + K  VVG
Sbjct: 273 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG 332

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 333 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 391

Query: 148 EM 149
            M
Sbjct: 392 GM 393

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  125 bits (316), Expect = 1e-34
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +VF+ A+I+  ++G     + N GQ C +A R    +  YD  + K    +  L  G  
Sbjct: 274 VIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP 333

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKG-AKVLLGGKPNPTIGELYYEPTLITDITPE 148
                 +GPL + A L +V + V++A   G  KV+ GG+     G  YY PTL+     +
Sbjct: 334 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG-YYYAPTLLAGALQD 392

Query: 149 MDCYR 153
               +
Sbjct: 393 DAIVQ 397

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  125 bits (316), Expect = 1e-34
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 2/124 (1%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  +V +  +I  A +        N GQ C +  R L+  K  D F+++  E+   + VG
Sbjct: 253 SPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVG 312

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGE--LYYEPTLITDI 145
           +    G  VGP+I+K Q  +V   ++  I++GA++  GG   P   E   +  PT+  ++
Sbjct: 313 NPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINV 372

Query: 146 TPEM 149
             +M
Sbjct: 373 DNQM 376

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  122 bits (309), Expect = 1e-33
 Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 1/123 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  ++ E  ++  AI   + S   N GQ C++  R L    RYDE ++  +  +  L VG
Sbjct: 259 SAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVG 318

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYY-EPTLITDIT 146
             +     +GPLI++ Q T+V   +   I++GA+++ GG     +   ++ +PT+  D+ 
Sbjct: 319 PPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVD 378

Query: 147 PEM 149
            +M
Sbjct: 379 NKM 381

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  121 bits (305), Expect = 6e-33
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V   A++DLA +  L S F   GQ C + +R +IH+  YDE + K     K L VGD 
Sbjct: 294 VVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDP 353

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                 +GP+I++    K+   ++   K+G +++ GG+ + + G  + +PT+I D+ PE 
Sbjct: 354 TNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTG-FFIQPTIIADLDPEA 411

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  119 bits (300), Expect = 2e-32
 Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 3/124 (2%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
             N++F  A+ID A+Q  +   F N GQ+C +  R L+ +  YD+ I    +  +   VG
Sbjct: 275 GANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVG 333

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGE--LYYEPTLITDI 145
            G  +G ++GP+++K Q  K+  ++   I +GA ++ GG   P   E   Y  PT+  D+
Sbjct: 334 PGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADV 393

Query: 146 TPEM 149
            P M
Sbjct: 394 KPHM 397

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  119 bits (301), Expect = 2e-32
 Identities = 20/137 (14%), Positives = 42/137 (30%), Gaps = 11/137 (8%)

Query: 28  SLNMVFESAN-----IDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIK 82
           +  ++   A       DL I+  +       GQ C +  R  + E   +  +     K+ 
Sbjct: 265 NSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLA 324

Query: 83  LLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL----YYE 138
            + VG+     V +G L+++ Q   V   +    ++               +        
Sbjct: 325 KITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVA 384

Query: 139 PTL--ITDITPEMDCYR 153
           P L  + D       + 
Sbjct: 385 PHLFVVNDPDNATLLHD 401

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  119 bits (300), Expect = 3e-32
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 8/131 (6%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +VF  A+++ A+   +   F   G+ C +++R L+ EK +++F+ K  E+ + + VG  
Sbjct: 278 ALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHP 337

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL-------YYEPTLI 142
                 VGPLI+   L +V   V+   ++GA++L+GG+   T           Y  PT+ 
Sbjct: 338 LDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVF 397

Query: 143 TDITPEMDCYR 153
                 M   +
Sbjct: 398 VG-ENHMKIAQ 407

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  113 bits (284), Expect = 4e-30
 Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V E+A+ DLA +G + S +   GQ C +A+R ++ +  Y+  + +  ++ + L VG  
Sbjct: 295 IIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA 354

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                ++GP+++  Q  KV   ++    +G +++LGGK     G  +  PT+ T++ P+ 
Sbjct: 355 E-ENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEG-YFIAPTVFTEVPPKA 411

Query: 150 D 150
            
Sbjct: 412 R 412

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  101 bits (253), Expect = 1e-25
 Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 2/122 (1%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           + + A++D A+   L S F   GQ C + +R ++ +  YD+FI +     K   VG    
Sbjct: 790 IDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSED 849

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC 151
               +G + +   +  +    +   ++G  +     P    G  +   T+I  I PE   
Sbjct: 850 PANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPA-GEG-YFVPMTIIGGIKPEHRI 907

Query: 152 YR 153
            +
Sbjct: 908 AQ 909

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score = 95.4 bits (238), Expect = 1e-23
 Identities = 29/123 (23%), Positives = 65/123 (52%), Gaps = 2/123 (1%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   AN++  +   + + F + G+ C++     + E   DEF++K  EK+  + +G+G  
Sbjct: 258 VLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLD 317

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYE-PTLITDITPEMD 150
            GV +GP+I +    +    ++  +++GA+++  G+      + Y+  PT+  ++T EM 
Sbjct: 318 DGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGR-ENVSDDGYFVGPTIFDNVTTEMT 376

Query: 151 CYR 153
            ++
Sbjct: 377 IWK 379

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score = 91.7 bits (228), Expect = 2e-22
 Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
              +A  +      + S FR+ GQ C +     + E   D  I   +   + L +GD + 
Sbjct: 769 ADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSD 828

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              +VGP+I+     ++   +     +      G  P       +  P +        
Sbjct: 829 VATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGC----FVAPHIFELTEAGQ 882

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score = 90.8 bits (226), Expect = 4e-22
 Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 12/130 (9%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTC--ISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
           +   A++D A    + + + + G+ C  IS     + E+  +  I K    ++ L +G  
Sbjct: 279 IMPDADLDQAANALIGAGYGSAGERCMAISVAVP-VGEETANRLIDKLVPMVESLRIGPY 337

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYE------PTLIT 143
                ++GP++ K    ++  ++D  I++GAK+++ G+ +  +    YE        L  
Sbjct: 338 TDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGR-DFKLQG--YENGHFIGGCLFD 394

Query: 144 DITPEMDCYR 153
           D+TP+MD Y+
Sbjct: 395 DVTPDMDIYK 404

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score = 82.3 bits (204), Expect = 3e-19
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 7/122 (5%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
              ++ E+A+I  A+   L SK  + G  C S    ++ ++ YDE   +F+     ++  
Sbjct: 217 VPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSK 276

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
             A   V    LI+ A   K+      AI + A V +                 +  ++ 
Sbjct: 277 TDA-DKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADTK------VLIGEGLGKVSY 329

Query: 148 EM 149
           + 
Sbjct: 330 DD 331

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 82.0 bits (203), Expect = 4e-19
 Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 8/119 (6%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
               +  SANI  A++  L SK  + G  C S    ++     +  I++F ++    +  
Sbjct: 222 GPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSD 281

Query: 88  DGAV--------SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYE 138
             AV           ++ P I    +  +  +    +   A+VL+  +        Y  
Sbjct: 282 AEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEETKVGAKIPYSR 340

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score = 80.1 bits (198), Expect = 2e-18
 Identities = 24/142 (16%), Positives = 39/142 (27%), Gaps = 22/142 (15%)

Query: 17  QPRPKVMPREASL-----NMVFESANIDLAI---QGALASKFRNCGQTCISANRFLIHE- 67
             RP+ +P    L       +   A    A    QG   S     GQ C +    ++ E 
Sbjct: 275 AARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEG 334

Query: 68  KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK 127
              D F +   E +  +        G+       +A+          A +   K LL  +
Sbjct: 335 ADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARF---------ATRNAVKPLLATE 385

Query: 128 PNPTIGELYYEPTLITDITPEM 149
                      P L      + 
Sbjct: 386 S----SGRDASPNLFETTGAQF 403

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score = 78.7 bits (195), Expect = 7e-18
 Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 8/118 (6%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V ++ ++D+A +     KF N GQTC++ +  L      ++ + K  + +K    G+ A 
Sbjct: 235 VDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAK 293

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              + G +I+     +V  +++       KV  GG  +      Y  PT++TD+ P+ 
Sbjct: 294 KSRDYGRIISARHFQRVMGLIEG-----QKVAYGGTGDA--ATRYIAPTILTDVDPQS 344

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score = 75.1 bits (185), Expect = 1e-16
 Identities = 25/146 (17%), Positives = 41/146 (28%), Gaps = 16/146 (10%)

Query: 12  VTQKTQPRPKVMPREASL-----NMVFESANIDLA--IQGALASKFRNCGQTCISANRFL 64
           +      RP+ +P    L       +F SA    A      +AS    CGQ C       
Sbjct: 237 LFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVF 296

Query: 65  IHEKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLL 124
                  +    F E  + L+          + P I  +  ++V          G  V  
Sbjct: 297 ALNTPETQ---AFIETAQSLIRQQSP--STLLTPGIRDSYQSQVVSR---GSDDGIDVTF 348

Query: 125 GGKPNPTIGE-LYYEPTLITDITPEM 149
               +P +   L+   +      P  
Sbjct: 349 SQAESPCVASALFVTSSENWRKHPAW 374

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score = 69.2 bits (170), Expect = 1e-14
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 5/118 (4%)

Query: 34  ESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAVS- 92
            SA++D  + G L S F   GQ C + +R  + +  + +   +  E+   + VGD A   
Sbjct: 325 SSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDF 384

Query: 93  GVNVGPLINKAQLTKVTRIVDDAIKKG-AKVLLGGKPNPTIGELYY-EPTLITDITPE 148
           G     +I+     ++ + ++ A       +L GG+ N ++G  YY EP +I    P+
Sbjct: 385 GTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVG--YYVEPCIIESKDPQ 440

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score = 65.1 bits (159), Expect = 4e-13
 Identities = 21/118 (17%), Positives = 51/118 (43%), Gaps = 10/118 (8%)

Query: 32  VFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDGAV 91
           V   A++D  +   +  KF N GQT I+ +   +H    D  + +  E++K  +      
Sbjct: 245 VLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN-- 302

Query: 92  SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
              + G L+ + Q+ ++  +++       +VL+G + + +  +     T++  +    
Sbjct: 303 ---STGKLVTERQVQRLVSLLEAT---QGQVLVGSQADVS--KRALSATVVDGVEWND 352

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	167
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	99.97
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	99.97
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	99.95
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	99.94
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	99.93
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	99.93

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=1.6e-46  Score=314.25  Aligned_cols=167  Identities=22%  Similarity=0.339  Sum_probs=157.0

Q ss_pred             CceEEeecChhhh--------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT--------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g--------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+++|        ++++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++
T Consensus       222 v~~I~FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~  301 (490)
T 2wme_A          222 IEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQAR  301 (490)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHH
T ss_pred             CCEEEEECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHH
Confidence            6899999999998        36799999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCC
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEM  149 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~  149 (167)
                      |+++|+++++++++|+|.+++++|||++++.+++++.++|++++.+|+++++||.+...   .+|+|++||||.+++++|
T Consensus       302 f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~  381 (490)
T 2wme_A          302 FEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDM  381 (490)
T ss_dssp             HHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTS
T ss_pred             HHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999987543   258999999999999999


Q ss_pred             ceeee-------eeeEecCcccccC
Q psy7043         150 DCYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       150 ~i~~e-------pv~~v~~~~~ai~  167 (167)
                      ++++|       +|+.+++++|||+
T Consensus       382 ~i~~eEiFGPVl~v~~~~~~deAi~  406 (490)
T 2wme_A          382 TIVREEIFGPVMSILVYDDEDEAIR  406 (490)
T ss_dssp             HHHHSCCCSSEEEEEEESCHHHHHH
T ss_pred             hhhhccccCCEEEEEEeCCHHHHHH
Confidence            99999       3777788888874

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=3.2e-45  Score=306.24  Aligned_cols=166  Identities=37%  Similarity=0.642  Sum_probs=156.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       228 v~~v~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  307 (484)
T 3ifg_A          228 VRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAF  307 (484)
T ss_dssp             CCEEEEESCHHHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHH
T ss_pred             cCEEEEECCHHHHHHHHHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHH
Confidence            6899999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+. +|+|++|||+.+++++|++++
T Consensus       308 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~  386 (484)
T 3ifg_A          308 ADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHAL-GHGFFEPTVLTGVKPDMDVAK  386 (484)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTT-CTTCBCCEEEEEECTTSGGGT
T ss_pred             HHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCC-CCceEcCEEEecCCCCChhhC
Confidence            9999999999999999999999999999999999999999999999999999987543 699999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.++++||||+
T Consensus       387 eEiFGPVl~v~~~~~~deAi~  407 (484)
T 3ifg_A          387 EETFGPLAPLFRFASEEELVR  407 (484)
T ss_dssp             SCCCSSEEEEEEECCHHHHHH
T ss_pred             CeeeCcEEEEEEeCCHHHHHH
Confidence            8       3677788888774

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=4.7e-45  Score=305.16  Aligned_cols=166  Identities=20%  Similarity=0.287  Sum_probs=156.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       202 vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  281 (484)
T 3ros_A          202 IQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEV  281 (484)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHH
T ss_pred             cCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHH
Confidence            5789999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|++++
T Consensus       282 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~  360 (484)
T 3ros_A          282 LHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDS-KGAFFRPTILTDIAKDNPVFD  360 (484)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCC-SSCCCCCEEEECCCTTSTTTT
T ss_pred             HHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCC-CCceeCCeEeecCCCCCcccc
Confidence            9999999999999999999999999999999999999999999999999999986443 699999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       361 eEiFGPVl~v~~~~~~deAi~  381 (484)
T 3ros_A          361 KEVFGPIAEVFVVEDDNAAIQ  381 (484)
T ss_dssp             SCCCSSEEEEEEESSHHHHHH
T ss_pred             cccccceEEEEEcCCHHHHHH
Confidence            8       3677788888874

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=7.1e-45  Score=304.97  Aligned_cols=166  Identities=17%  Similarity=0.338  Sum_probs=157.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       240 v~~V~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  319 (498)
T 4f3x_A          240 VGMVSITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKL  319 (498)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHH
T ss_pred             cCEEEEECCHHHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHH
Confidence            6899999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCC-EEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGA-KVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga-~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+ ++++||...+. +|+|++|||+.+++++|+++
T Consensus       320 ~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~  398 (498)
T 4f3x_A          320 VADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSD-EGFFFQPTVVAGATQEDEIV  398 (498)
T ss_dssp             HHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCS-SSCCBCCEEEESCCTTSHHH
T ss_pred             HHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCC-CCcEECCEEeecCCCCChhh
Confidence            99999999999999999999999999999999999999999999999 99999987543 69999999999999999999


Q ss_pred             eee-------eeEecCcccccC
Q psy7043         153 RFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~ep-------v~~v~~~~~ai~  167 (167)
                      +||       |+.++++||||+
T Consensus       399 ~eEiFGPVl~v~~~~~~deAi~  420 (498)
T 4f3x_A          399 RREVFGPVVSVTRFTGKDDAVA  420 (498)
T ss_dssp             HSCCCSSEEEEEEECTTSCHHH
T ss_pred             CCceeCcEEEEEEeCCHHHHHH
Confidence            993       677788888874

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=1.3e-44  Score=303.83  Aligned_cols=167  Identities=34%  Similarity=0.590  Sum_probs=156.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       227 vd~I~FTGS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  306 (506)
T 3rh9_A          227 VPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAF  306 (506)
T ss_dssp             CCEEEEESCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHH
T ss_pred             CCEEEEECCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHH
Confidence            6799999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.++|++++++|+++++||...+..+|+|++|||+.+++++|++++
T Consensus       307 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~  386 (506)
T 3rh9_A          307 GQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQ  386 (506)
T ss_dssp             HHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHH
T ss_pred             HHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhc
Confidence            99999999999999999999999999999999999999999999999999999753211599999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.++++||||+
T Consensus       387 eEiFGPVl~v~~~~~~deAi~  407 (506)
T 3rh9_A          387 EETFGPLVPMALFRTEEEVID  407 (506)
T ss_dssp             SCCCSSEEEEEEECCHHHHHH
T ss_pred             ccccCcEEEEEEeCCHHHHHH
Confidence            9       3677788888874

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=1.4e-44  Score=303.63  Aligned_cols=167  Identities=26%  Similarity=0.403  Sum_probs=156.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       231 v~~I~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  310 (503)
T 3iwj_A          231 VDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEF  310 (503)
T ss_dssp             CCEEEEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHH
T ss_pred             ccEEEEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHH
Confidence            6799999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||...+. ..|+|++|||+.+++++|+++
T Consensus       311 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~  390 (503)
T 3iwj_A          311 LNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIW  390 (503)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHH
T ss_pred             HHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhh
Confidence            9999999999999999999999999999999999999999999999999999986541 269999999999999999999


Q ss_pred             eee-------eeEecCcccccC
Q psy7043         153 RFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~ep-------v~~v~~~~~ai~  167 (167)
                      +||       |+.+++++|||+
T Consensus       391 ~eEiFGPVl~v~~~~~~deAi~  412 (503)
T 3iwj_A          391 REEVFGPVLCVKTFSTEEEAID  412 (503)
T ss_dssp             HSCCCSSEEEEEEESSHHHHHH
T ss_pred             CceeeCceEEEEEeCCHHHHHH
Confidence            993       667788888874

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=1.4e-44  Score=303.24  Aligned_cols=166  Identities=23%  Similarity=0.345  Sum_probs=156.1

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+.+|       + +++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++
T Consensus       238 v~~I~FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~  317 (500)
T 1o04_A          238 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDE  317 (500)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHH
T ss_pred             cCEEEEECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHH
Confidence            6899999999998       4 8899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|+++
T Consensus       318 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~  396 (500)
T 1o04_A          318 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD-RGYFIQPTVFGDVQDGMTIA  396 (500)
T ss_dssp             HHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCS-SSSCBCCEEEESCCTTSHHH
T ss_pred             HHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC-CCCeeCCEEEeCCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999986532 58999999999999999999


Q ss_pred             ee-------eeeEecCcccccC
Q psy7043         153 RF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e-------pv~~v~~~~~ai~  167 (167)
                      +|       +|+.+++++|||+
T Consensus       397 ~eEiFGPVl~v~~~~~~deAi~  418 (500)
T 1o04_A          397 KEEIFGPVMQILKFKTIEEVVG  418 (500)
T ss_dssp             HSCCCSSEEEEEEECCHHHHHH
T ss_pred             hCcccceEEEEEeeCCHHHHHH
Confidence            99       3677777788773

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=1.7e-44  Score=303.84  Aligned_cols=166  Identities=23%  Similarity=0.436  Sum_probs=155.6

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+++|       + +++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||+++|++
T Consensus       258 v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~  337 (517)
T 2o2p_A          258 VRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ  337 (517)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHH
T ss_pred             CCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHH
Confidence            6899999999998       4 7899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|++++++|||++++.+++++.++|++++++|+++++||...+. +|+|++||||.+++++|+++
T Consensus       338 f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~  416 (517)
T 2o2p_A          338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR-PGFFFQPTVFTDVEDHMYIA  416 (517)
T ss_dssp             HHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSS-SSCCBCCEEEESCCTTSGGG
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCC-CCCeECCEEEeCCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999999987542 59999999999999999999


Q ss_pred             ee----e---eeEecC--cccccC
Q psy7043         153 RF----P---CRLVDT--IPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~--~~~ai~  167 (167)
                      +|    |   |+.+++  ++|||+
T Consensus       417 ~eEiFGPVl~v~~~~~~~~deAi~  440 (517)
T 2o2p_A          417 KEESFGPIMIISRFADGDVDAVLS  440 (517)
T ss_dssp             TSCCCSSEEEEEEECTTCSHHHHH
T ss_pred             hccccccEEEEEEcCCCCHHHHHH
Confidence            99    3   666777  777763

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=1.9e-44  Score=303.66  Aligned_cols=167  Identities=23%  Similarity=0.428  Sum_probs=156.7

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++|++|
T Consensus       250 vd~V~FTGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f  329 (520)
T 3ed6_A          250 VDLVSFTGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKF  329 (520)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHH
T ss_pred             cCEEEEECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHH
Confidence            6899999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC---CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT---IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||.....   .+|+|++|||+.+++++|+
T Consensus       330 ~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~  409 (520)
T 3ed6_A          330 EQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMR  409 (520)
T ss_dssp             HHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSH
T ss_pred             HHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCc
Confidence            9999999999999999999999999999999999999999999999999999987531   2599999999999999999


Q ss_pred             eeee----e---eeEecCcccccC
Q psy7043         151 CYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e----p---v~~v~~~~~ai~  167 (167)
                      +++|    |   |+.+++++|||+
T Consensus       410 i~~eEiFGPVl~v~~~~~~deAi~  433 (520)
T 3ed6_A          410 IVQEEVFGPVVTVEGFETEQEAIQ  433 (520)
T ss_dssp             HHHSCCCSSEEEEEEESSHHHHHH
T ss_pred             cccCceeCcEEEEEEeCCHHHHHH
Confidence            9999    3   677788888873

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-44  Score=303.95  Aligned_cols=167  Identities=27%  Similarity=0.435  Sum_probs=156.5

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       241 vd~I~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  320 (528)
T 3u4j_A          241 VDMVAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDAL  320 (528)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHH
T ss_pred             cCEEEEeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHH
Confidence            6899999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+..+|+|++|||+.+++++|++++
T Consensus       321 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~  400 (528)
T 3u4j_A          321 MERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAR  400 (528)
T ss_dssp             HHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHH
T ss_pred             HHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCcccc
Confidence            99999999999999999999999999999999999999999999999999999764311489999999999999999999


Q ss_pred             ee-------eeEecCcccccC
Q psy7043         154 FP-------CRLVDTIPTYIR  167 (167)
Q Consensus       154 ep-------v~~v~~~~~ai~  167 (167)
                      ||       |+.+++++|||+
T Consensus       401 eEiFGPVl~v~~~~~~deAi~  421 (528)
T 3u4j_A          401 EEIFGPVLSTLTFKTADEAVA  421 (528)
T ss_dssp             SCCCSSEEEEEEESSHHHHHH
T ss_pred             ceeeccEEEEEEeCCHHHHHH
Confidence            93       667788888873

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.9e-44  Score=301.15  Aligned_cols=167  Identities=24%  Similarity=0.370  Sum_probs=155.9

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       225 v~~I~FTGS~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  304 (495)
T 3b4w_A          225 IDMFTFTGSSAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI  304 (495)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHH
T ss_pred             cCEEEEeCCHHHHHHHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHH
Confidence            6799999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-CCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-IGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..+.. ..|+|++|||+.+++++|+++
T Consensus       305 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~  384 (495)
T 3b4w_A          305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIA  384 (495)
T ss_dssp             HHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHH
T ss_pred             HHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhh
Confidence            9999999999999999999999999999999999999999999999999999976531 148999999999999999999


Q ss_pred             ee-------eeeEecCcccccC
Q psy7043         153 RF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e-------pv~~v~~~~~ai~  167 (167)
                      +|       +|+.+++++|||+
T Consensus       385 ~eEiFGPVl~v~~~~~~deAi~  406 (495)
T 3b4w_A          385 QEEIFGPVLAIIPYDTEEDAIA  406 (495)
T ss_dssp             HSCCCSSEEEEEEESSHHHHHH
T ss_pred             hcccccceEEEEecCCHHHHHH
Confidence            99       3677777888773

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=2e-44  Score=302.41  Aligned_cols=166  Identities=28%  Similarity=0.445  Sum_probs=155.9

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+.+|       + +++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++
T Consensus       239 v~~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~  318 (501)
T 1bxs_A          239 VDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDE  318 (501)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHH
T ss_pred             cCEEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHH
Confidence            6899999999998       4 8899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|+++
T Consensus       319 f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~  397 (501)
T 1bxs_A          319 FVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGN-KGYFIQPTVFSDVTDDMRIA  397 (501)
T ss_dssp             HHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECS-SSCEECCEEEESCCTTSHHH
T ss_pred             HHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC-CCCeeCCEEEecCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999976432 58999999999999999999


Q ss_pred             ee-------eeeEecCcccccC
Q psy7043         153 RF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e-------pv~~v~~~~~ai~  167 (167)
                      +|       +|+.+++++|||+
T Consensus       398 ~eEiFGPVl~v~~~~~~deAi~  419 (501)
T 1bxs_A          398 KEEIFGPVQQIMKFKSLDDVIK  419 (501)
T ss_dssp             HSCCCSSEEEEEEECCHHHHHH
T ss_pred             hcccccceEEEEEeCCHHHHHH
Confidence            99       3677777888773

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=2.2e-44  Score=302.33  Aligned_cols=164  Identities=37%  Similarity=0.601  Sum_probs=155.5

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|
T Consensus       248 v~~V~FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f  327 (504)
T 3ek1_A          248 VRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKF  327 (504)
T ss_dssp             CCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHH
T ss_pred             cCEEEEECCHHHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHH
Confidence            6899999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...   +|+|++|||+.+++++|++++
T Consensus       328 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~---~g~~~~PTvl~~v~~~~~i~~  404 (504)
T 3ek1_A          328 AEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL---GGLFFEPGILTGVTSDMLVAK  404 (504)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE---ETTEECCEEEEEECTTSGGGT
T ss_pred             HHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC---CCceECCeEEecCCCcChhhc
Confidence            99999999999999999999999999999999999999999999999999999762   599999999999999999999


Q ss_pred             ee-------eeEecCcccccC
Q psy7043         154 FP-------CRLVDTIPTYIR  167 (167)
Q Consensus       154 ep-------v~~v~~~~~ai~  167 (167)
                      ||       |+.++++||||+
T Consensus       405 eEiFGPVl~v~~~~~~deAi~  425 (504)
T 3ek1_A          405 EETFGPLAPLFAFDTEEEVIA  425 (504)
T ss_dssp             SCCCSSEEEEEEECCHHHHHH
T ss_pred             ccccCcEEEEEEeCCHHHHHH
Confidence            93       667788888873

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=3.7e-44  Score=300.88  Aligned_cols=166  Identities=25%  Similarity=0.343  Sum_probs=155.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       240 vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  319 (500)
T 2j6l_A          240 VNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEV  319 (500)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHH
T ss_pred             cCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHH
Confidence            6799999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|++++
T Consensus       320 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~  398 (500)
T 2j6l_A          320 VNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDR-PGNYVEPTIVTGLGHDASIAH  398 (500)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSS-SSSCBCCEEEESCCTTCHHHH
T ss_pred             HHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCC-CCCEEcCEEEECCCCcChhhc
Confidence            9999999999999999999999999999999999999999999999999999986432 589999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       399 eEiFGPVl~v~~~~~~deAi~  419 (500)
T 2j6l_A          399 TETFAPILYVFKFQNEEEVFA  419 (500)
T ss_dssp             SCCSSSEEEEEEECCHHHHHH
T ss_pred             CcccCceEEEEeeCCHHHHHH
Confidence            9       3667778888773

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=4.7e-44  Score=299.80  Aligned_cols=165  Identities=24%  Similarity=0.409  Sum_probs=155.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       238 vd~I~FTGS~~~G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  317 (495)
T 1wnd_A          238 VRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTL  317 (495)
T ss_dssp             EEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHH
T ss_pred             cCEEEEECcHHHHHHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCC-CEEEeCCc-cCCCCCCceEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKG-AKVLLGGK-PNPTIGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G-a~v~~gg~-~~~~~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +++|+++++++++|+|.+++++||||+++.+++++.++|++++++| +++++||. .++  .|+|++|||+.+++++|++
T Consensus       318 ~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~--~g~~~~PTvl~~v~~~~~i  395 (495)
T 1wnd_A          318 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG--NGYYYAPTLLAGALQDDAI  395 (495)
T ss_dssp             HHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSS--SSCCBCCEEEECCCTTSHH
T ss_pred             HHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCC--CCCeeCCEEEeCCCCCChh
Confidence            9999999999999999999999999999999999999999999999 99999997 542  4899999999999999999


Q ss_pred             eee-------eeeEecCcccccC
Q psy7043         152 YRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~e-------pv~~v~~~~~ai~  167 (167)
                      ++|       +|+.+++++|||+
T Consensus       396 ~~eEiFGPVl~v~~~~~~deAi~  418 (495)
T 1wnd_A          396 VQKEVFGPVVSVTPFDNEEQVVN  418 (495)
T ss_dssp             HHSCCCSSEEEEEEECCHHHHHH
T ss_pred             hhccccCceEEEEEeCCHHHHHH
Confidence            998       3777777788773

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=4.7e-44  Score=299.94  Aligned_cols=166  Identities=24%  Similarity=0.402  Sum_probs=154.6

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++||| +.+++.+++++|.|+||.|++++|+|||+++|++|
T Consensus       241 v~~I~FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f  319 (497)
T 3i44_A          241 LEMISFTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKA  319 (497)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHH
T ss_pred             cCEEEEeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHH
Confidence            6899999999998       588999999999999999999999 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCc-cCCC-CCCceEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGK-PNPT-IGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~-~~~~-~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +++|+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||. .... ..|+|++|||+.+++++|++
T Consensus       320 ~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i  399 (497)
T 3i44_A          320 IKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRI  399 (497)
T ss_dssp             HHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHH
T ss_pred             HHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHH
Confidence            999999999999999999999999999999999999999999999999999994 3321 25999999999999999999


Q ss_pred             eeee-------eeEecCcccccC
Q psy7043         152 YRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~ep-------v~~v~~~~~ai~  167 (167)
                      ++||       |+.+++++|||+
T Consensus       400 ~~eEiFGPVl~v~~~~~~deAi~  422 (497)
T 3i44_A          400 FREEIFGPVLSLLPFNTEDEAVT  422 (497)
T ss_dssp             HHSCCCSSEEEEEEESSHHHHHH
T ss_pred             HcCcccCceEEEEecCCHHHHHH
Confidence            9993       667778888773

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=6.5e-44  Score=298.26  Aligned_cols=166  Identities=33%  Similarity=0.594  Sum_probs=156.3

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       225 v~~I~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  304 (481)
T 3jz4_A          225 VRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRF  304 (481)
T ss_dssp             EEEEEEESCHHHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHH
T ss_pred             cCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHH
Confidence            5789999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+. +|+|++|||+.+++++|++++
T Consensus       305 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~v~~~~~i~~  383 (481)
T 3jz4_A          305 AEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHER-GGNFFQPTILVDVPANAKVSK  383 (481)
T ss_dssp             HHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTT-CTTCBCCEEEESCCTTSGGGT
T ss_pred             HHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC-CCceeccEEEecCCCCccccc
Confidence            9999999999999999999999999999999999999999999999999999987433 589999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       384 eEiFGPVl~v~~~~~~deAi~  404 (481)
T 3jz4_A          384 EETFGPLAPLFRFKDEADVIA  404 (481)
T ss_dssp             SCCCSSEEEEEEECCHHHHHH
T ss_pred             ccccCceEEEEEECCHHHHHH
Confidence            9       3677788888874

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=7.2e-44  Score=299.28  Aligned_cols=167  Identities=26%  Similarity=0.456  Sum_probs=155.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       234 v~~V~FTGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  313 (503)
T 1a4s_A          234 VAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQF  313 (503)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHH
T ss_pred             cCEEEEeCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHH
Confidence            6899999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CC---CCCceEeeEEEecCCCC
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPN--PT---IGELYYEPTLITDITPE  148 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~--~~---~~g~~~~Ptvl~~~~~~  148 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...  +.   ..|+|++|||+.+++++
T Consensus       314 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~  393 (503)
T 1a4s_A          314 LEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDD  393 (503)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTT
T ss_pred             HHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCC
Confidence            99999999999999999999999999999999999999999999999999999764  21   15899999999999999


Q ss_pred             Cceeee-------eeeEecCcccccC
Q psy7043         149 MDCYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       149 ~~i~~e-------pv~~v~~~~~ai~  167 (167)
                      |++++|       +|+.+++++|||+
T Consensus       394 ~~i~~eEiFGPVl~v~~~~~~deAi~  419 (503)
T 1a4s_A          394 MTCVKEEIFGPVMSVLPFDTEEEVLQ  419 (503)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred             CHHHhccccCceEEEEecCCHHHHHH
Confidence            999999       3677778888773

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=9.9e-44  Score=297.02  Aligned_cols=166  Identities=28%  Similarity=0.508  Sum_probs=155.3

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       222 v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f  301 (479)
T 2imp_A          222 VAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQF  301 (479)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHH
T ss_pred             cCEEEEeCCHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHH
Confidence            5789999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCC-CCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAV-SGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~-~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|+|.+ +++++||++++.+++++.++|++++++|+++++||...+. .|+|++|||+.+++++|+++
T Consensus       302 ~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~Ptvl~~v~~~~~~~  380 (479)
T 2imp_A          302 VNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEG-KGYYYPPTLLLDVRQEMSIM  380 (479)
T ss_dssp             HHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCS-SSCCCCCEEEESCCTTSGGG
T ss_pred             HHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCC-CCceECCEEEeCCCCCCHHH
Confidence            999999999999999999 9999999999999999999999999999999999976432 58999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       381 ~eEiFGPVl~v~~~~~~~eAi~  402 (479)
T 2imp_A          381 HEETFGPVLPVVAFDTLEDAIS  402 (479)
T ss_dssp             GSCCCSSEEEEEEESSHHHHHH
T ss_pred             hCccCCceEEEEeeCCHHHHHH
Confidence            98    3   667777788773

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-44  Score=302.01  Aligned_cols=167  Identities=17%  Similarity=0.363  Sum_probs=154.7

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecc-cHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEK-RYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~-i~~~   72 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ ++++
T Consensus       241 vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~  320 (521)
T 4e4g_A          241 IAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANR  320 (521)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHH
T ss_pred             cCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHH
Confidence            6899999999998       4789999999999999999999999999999999999999999999999999999 9999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC---CCCCceEeeEEEecCCCCC
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP---TIGELYYEPTLITDITPEM  149 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~  149 (167)
                      |+++|+++++++++|+|.++++++||+++..+++++.++|++++.+|+++++||....   ..+|+|++|||+.+++++|
T Consensus       321 f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~  400 (521)
T 4e4g_A          321 LIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDM  400 (521)
T ss_dssp             HHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTS
T ss_pred             HHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCC
Confidence            9999999999999999999999999999999999999999999999999999997531   1269999999999999999


Q ss_pred             ceeee----e---eeEecCcccccC
Q psy7043         150 DCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       150 ~i~~e----p---v~~v~~~~~ai~  167 (167)
                      ++++|    |   |+.+++++|||+
T Consensus       401 ~i~~eEiFGPVl~v~~~~~~deAi~  425 (521)
T 4e4g_A          401 DIYKTEIFGPVLSVVRARNYEEALS  425 (521)
T ss_dssp             HHHHSCCCSSEEEECCBSSHHHHHH
T ss_pred             HhhcCcccCcEEEEEEeCCHHHHHH
Confidence            99999    4   556666777763

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=3.4e-44  Score=299.50  Aligned_cols=167  Identities=23%  Similarity=0.338  Sum_probs=157.4

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       203 v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f  282 (474)
T 4h7n_A          203 VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEF  282 (474)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHH
T ss_pred             cceEEeccccchhhhhhhhhhcccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++++++.++|++++.||...+..+|+|++|||+.+++++|++++
T Consensus       283 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~  362 (474)
T 4h7n_A          283 YHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMT  362 (474)
T ss_dssp             HHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGT
T ss_pred             HHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeecccccccc
Confidence            99999999999999999999999999999999999999999999999999999865433689999999999999999999


Q ss_pred             ee-------eeEecCcccccC
Q psy7043         154 FP-------CRLVDTIPTYIR  167 (167)
Q Consensus       154 ep-------v~~v~~~~~ai~  167 (167)
                      ||       |+.++++||||+
T Consensus       363 eEiFGPVl~v~~~~~~deAi~  383 (474)
T 4h7n_A          363 EETFGPIMPVMPFPDVEEAVY  383 (474)
T ss_dssp             SCCCSSEEEEEEESSHHHHHH
T ss_pred             ccccCcEEEEEEECCHHHHHH
Confidence            93       777788888874

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=9.1e-44  Score=300.57  Aligned_cols=165  Identities=25%  Similarity=0.386  Sum_probs=154.7

Q ss_pred             CceEEeecChhhh-------ccC------CCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------QKT------QPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~------~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|+||||+.+|       +++      +||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+
T Consensus       252 v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~  331 (538)
T 3qan_A          252 TSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHK  331 (538)
T ss_dssp             EEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEET
T ss_pred             cCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEeh
Confidence            5789999999998       456      999999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      +++++|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++++||..++. .|+|++|||+.++++
T Consensus       332 ~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~-~g~~~~PTvl~~v~~  409 (538)
T 3qan_A          332 DVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSS-TGFFIQPTIIADLDP  409 (538)
T ss_dssp             TTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECS-SSCEECCEEEESCCT
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCC-CCceeCCeeeecCCC
Confidence            9999999999999999999999999999999999999999999999999999 99999987543 599999999999999


Q ss_pred             CCceeee-------eeeEecCcccccC
Q psy7043         148 EMDCYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       148 ~~~i~~e-------pv~~v~~~~~ai~  167 (167)
                      +|++++|       +|+.+++++|||+
T Consensus       410 ~~~i~~eEiFGPVl~V~~~~~~deAi~  436 (538)
T 3qan_A          410 EAVIMQEEIFGPVVAFSKANDFDHALE  436 (538)
T ss_dssp             TSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred             CChhhCCCcCCcEEEEEEeCCHHHHHH
Confidence            9999999       3677788888873

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=5.9e-44  Score=299.50  Aligned_cols=167  Identities=29%  Similarity=0.477  Sum_probs=154.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       228 vd~I~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  307 (497)
T 3k2w_A          228 TKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEF  307 (497)
T ss_dssp             EEEEEEESCHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHH
T ss_pred             cCEEEEECcHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHH
Confidence            5789999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCC-CCCceEeeEEEecCCCCCc
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKP--NPT-IGELYYEPTLITDITPEMD  150 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~--~~~-~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..  .+. .+|+|++|||+.+++++|+
T Consensus       308 ~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~  387 (497)
T 3k2w_A          308 MAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNI  387 (497)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSH
T ss_pred             HHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcH
Confidence            9999999999999999999999999999999999999999999999999999973  221 2589999999999999999


Q ss_pred             eeee-------eeeEecCcccccC
Q psy7043         151 CYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e-------pv~~v~~~~~ai~  167 (167)
                      +++|       +|+.++++||||+
T Consensus       388 i~~eEiFGPVl~v~~~~~~deAi~  411 (497)
T 3k2w_A          388 VVHEETFGPILPIVKVSSMEQAIE  411 (497)
T ss_dssp             HHHSCCCSSEEEEEEESCHHHHHH
T ss_pred             hhcCCccCcEEEEEEeCCHHHHHH
Confidence            9999       3777888888874

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=1.7e-43  Score=297.72  Aligned_cols=166  Identities=23%  Similarity=0.376  Sum_probs=155.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       242 vd~I~FTGS~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  321 (515)
T 2d4e_A          242 VPLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDF  321 (515)
T ss_dssp             CCEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHH
T ss_pred             cCEEEEeCcHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHH
Confidence            6899999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-------CCCceEeeEEEecCC
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-------IGELYYEPTLITDIT  146 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-------~~g~~~~Ptvl~~~~  146 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..++.       ..|+|++|||+.+ +
T Consensus       322 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~  400 (515)
T 2d4e_A          322 VGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-E  400 (515)
T ss_dssp             HHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-C
T ss_pred             HHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-C
Confidence            9999999999999999999999999999999999999999999999999999986430       1489999999999 9


Q ss_pred             CCCceeee-------eeeEecCcccccC
Q psy7043         147 PEMDCYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       147 ~~~~i~~e-------pv~~v~~~~~ai~  167 (167)
                      ++|++++|       +|+.+++++|||+
T Consensus       401 ~~~~i~~eEiFGPVl~v~~~~~~deAi~  428 (515)
T 2d4e_A          401 NHMKIAQEEIFGPVLVAIPFKDEEEALR  428 (515)
T ss_dssp             TTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred             CCChhhhccccCCceEEEeeCCHHHHHH
Confidence            99999999       3777778888873

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.6e-44  Score=300.62  Aligned_cols=167  Identities=24%  Similarity=0.393  Sum_probs=155.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       229 vd~I~FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f  308 (517)
T 3r31_A          229 VAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARF  308 (517)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHH
T ss_pred             cCEEeccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCceEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT--IGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+.  .+|+|++|||+.+++++|++
T Consensus       309 ~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i  388 (517)
T 3r31_A          309 LENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTI  388 (517)
T ss_dssp             HHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHH
T ss_pred             HHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999931221  25999999999999999999


Q ss_pred             eeee-------eeEecCcccccC
Q psy7043         152 YRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~ep-------v~~v~~~~~ai~  167 (167)
                      ++||       |+.++++||||+
T Consensus       389 ~~eEiFGPVl~v~~~~~~deAi~  411 (517)
T 3r31_A          389 AREEIFGPVMCVLDFDDEDEVLA  411 (517)
T ss_dssp             HHSCCSSSEEEEEEECCHHHHHH
T ss_pred             ccceeeccEEEEEEeCCHHHHHH
Confidence            9993       677888888874

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=2.4e-43  Score=296.16  Aligned_cols=161  Identities=21%  Similarity=0.376  Sum_probs=152.5

Q ss_pred             CceEEeecChhhh------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHH
Q psy7043           1 MRLFGLKNSFPVT------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFI   74 (167)
Q Consensus         1 ~~~v~ftGs~~~g------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~   74 (167)
                      |++|+||||+.+|      +. +||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|+
T Consensus       232 vd~I~FTGS~~~G~~i~~~aa-l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~  310 (505)
T 3prl_A          232 IDMITFTGGTTTGERISEKAK-MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLV  310 (505)
T ss_dssp             CCEEEEESCHHHHHHHHHHCC-SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHH
T ss_pred             CCEEEEeCCHHHHHHHHHHcc-CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHH
Confidence            6799999999998      24 8999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee
Q psy7043          75 SKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF  154 (167)
Q Consensus        75 ~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e  154 (167)
                      ++|+++++++++|+|. +++++||+++..+++++.++|++++++|+++++||..    .|+|++|||+.+++++|++++|
T Consensus       311 ~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~----~g~~~~PTvl~~v~~~~~i~~e  385 (505)
T 3prl_A          311 ANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR----QGNLLSPTLLDDVTPAMRVAWE  385 (505)
T ss_dssp             HHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE----ETTEECCEEEESCCTTSGGGTS
T ss_pred             HHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC----CCceeCCeEeecCCCCChhhcC
Confidence            9999999999999999 9999999999999999999999999999999999974    4899999999999999999999


Q ss_pred             -------eeeEecCcccccC
Q psy7043         155 -------PCRLVDTIPTYIR  167 (167)
Q Consensus       155 -------pv~~v~~~~~ai~  167 (167)
                             +|+.++++||||+
T Consensus       386 EiFGPVl~V~~~~~~deAi~  405 (505)
T 3prl_A          386 EPFGPVLPIIRVKDANEAIS  405 (505)
T ss_dssp             CCCSSEEEEEEESSHHHHHH
T ss_pred             CccCcEEEEEEeCCHHHHHH
Confidence                   3777888888874

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=1.8e-43  Score=294.38  Aligned_cols=166  Identities=23%  Similarity=0.433  Sum_probs=156.3

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       205 v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  284 (462)
T 3etf_A          205 IAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAF  284 (462)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHH
T ss_pred             CCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHH
Confidence            4789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++
T Consensus       285 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~v~~~~~~~~  363 (462)
T 3etf_A          285 TDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAG-EGNYYAATVLADVTPDMTAFR  363 (462)
T ss_dssp             HHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSS-SSCCBCCEEEESCCTTSHHHH
T ss_pred             HHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCC-CCcEEeeEEEECCCCCChhhc
Confidence            9999999999999999999999999999999999999999999999999999986543 699999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       364 eE~FGPVl~v~~~~~~deAi~  384 (462)
T 3etf_A          364 QELFGPVAAITVAKDAAHALA  384 (462)
T ss_dssp             SCCCSSEEEEEEESSHHHHHH
T ss_pred             CceeCcEEEEEEcCCHHHHHH
Confidence            8       3677788888873

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=3.1e-43  Score=298.39  Aligned_cols=165  Identities=20%  Similarity=0.322  Sum_probs=152.0

Q ss_pred             CceEEeecChhhh-------ccCCC------ceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------QKTQP------RPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~------~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|+||||+.+|       +++++      |+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+
T Consensus       279 v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~  358 (563)
T 4e3x_A          279 LCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPK  358 (563)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEG
T ss_pred             cCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEec
Confidence            5789999999998       45666      5999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCC-CCCCCccCccCCHHHHHHHHHHHHHHHH-CCCEEEeCCccCCCCCCceEeeEEEecC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDG-AVSGVNVGPLINKAQLTKVTRIVDDAIK-KGAKVLLGGKPNPTIGELYYEPTLITDI  145 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~-~~~~~~~gp~i~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~  145 (167)
                      ++|++|+++|+++++++++|+| .+++++|||++++.+++++.++|+++++ +|+++++||..++. +|+|++|||+.++
T Consensus       359 si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~-~G~fv~PTvl~~v  437 (563)
T 4e3x_A          359 SLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNES-VGYYVEPCIIESK  437 (563)
T ss_dssp             GGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECS-SSCEECCEEEEES
T ss_pred             chHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCC-CCcEecCEEEecC
Confidence            9999999999999999999999 9999999999999999999999999996 89999999986543 6999999999999


Q ss_pred             CCCCceeee----eeeEecC-----ccccc
Q psy7043         146 TPEMDCYRF----PCRLVDT-----IPTYI  166 (167)
Q Consensus       146 ~~~~~i~~e----pv~~v~~-----~~~ai  166 (167)
                      +++|++++|    ||+.|..     ++|||
T Consensus       438 ~~~~~i~~eEiFGPVl~V~~~~d~~~deAi  467 (563)
T 4e3x_A          438 DPQEPIMKEEIFGPVLTVYVYPDDKYRETL  467 (563)
T ss_dssp             CTTCGGGTSCCCSSEEEEEEECGGGHHHHH
T ss_pred             CCCChhhcCCCcCeEEEEEEECCCCHHHHH
Confidence            999999999    5666644     46666

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=1.4e-43  Score=296.59  Aligned_cols=165  Identities=38%  Similarity=0.591  Sum_probs=155.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       229 v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  308 (487)
T 2w8n_A          229 VSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAF  308 (487)
T ss_dssp             EEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHH
T ss_pred             cCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHH
Confidence            5789999999998       578999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHh-hccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCc-eEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKL-LVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGEL-YYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~-~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~-~~~Ptvl~~~~~~~~i  151 (167)
                      +++|++++++ +++|+|.++++++||++++.+++++.++|++++++|+++++||..++  .|+ |++|||+.+++++|++
T Consensus       309 ~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~--~g~~~~~Ptvl~~v~~~~~i  386 (487)
T 2w8n_A          309 VKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ--LGKNFFEPTLLCNVTQDMLC  386 (487)
T ss_dssp             HHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCT--TCTTCBCCEEEEEECGGGGT
T ss_pred             HHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC--CCCceECCEEEecCCCcchh
Confidence            9999999999 99999999999999999999999999999999999999999998653  489 9999999999999999


Q ss_pred             eee-------eeeEecCcccccC
Q psy7043         152 YRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~e-------pv~~v~~~~~ai~  167 (167)
                      ++|       +|+.+++++|||+
T Consensus       387 ~~eEiFGPVl~v~~~~~~~eAi~  409 (487)
T 2w8n_A          387 THEETFGPLAPVIKFDTEEEAIA  409 (487)
T ss_dssp             TCTTCCSSEEEEEEESCHHHHHH
T ss_pred             hhcccccceEEEEEeCCHHHHHH
Confidence            999       3667777788773

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=6.2e-43  Score=292.48  Aligned_cols=160  Identities=27%  Similarity=0.445  Sum_probs=150.0

Q ss_pred             CceEEeecChhhhc-----cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVTQ-----KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g~-----~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      |++|+||||+.+|.     ..+||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|++
T Consensus       214 vd~V~fTGS~~~g~~i~~~aa~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~  293 (486)
T 3pqa_A          214 VNMISFTGSSKVGELITKKAGFKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIE  293 (486)
T ss_dssp             CCEEEEESCHHHHHHHHHHCCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHH
T ss_pred             ccEEEEECChHHHHHHHHHcCCCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHH
Confidence            67999999999981     2299999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      +|+++++++++|+|+++++++||+++..+++++.++|++++.+|+++++||..    .|+|++|||+ +++++|++++| 
T Consensus       294 ~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~----~g~~~~Ptvl-~v~~~~~i~~eE  368 (486)
T 3pqa_A          294 MFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR----DKALFYPTIL-EVDRDNILCKTE  368 (486)
T ss_dssp             HHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE----ETTEECCEEE-ECCTTSGGGTCC
T ss_pred             HHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC----CCcEeccEEE-eCCCCChhhccc
Confidence            99999999999999999999999999999999999999999999999999975    3899999999 99999999999 


Q ss_pred             ---e---eeEecCccccc
Q psy7043         155 ---P---CRLVDTIPTYI  166 (167)
Q Consensus       155 ---p---v~~v~~~~~ai  166 (167)
                         |   |+.+++ +|||
T Consensus       369 iFGPVl~v~~~~~-deAi  385 (486)
T 3pqa_A          369 TFAPVIPIIRTNE-EEMI  385 (486)
T ss_dssp             CCSSEEEEEEECH-HHHH
T ss_pred             ccccEEEEEEEcH-HHHH
Confidence               3   566666 7776

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=4.4e-43  Score=295.36  Aligned_cols=164  Identities=23%  Similarity=0.387  Sum_probs=152.5

Q ss_pred             CceEEeecChhhh-------c------cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------Q------KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~------~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|+||||+.+|       +      +++||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||+
T Consensus       253 v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~  332 (516)
T 1uzb_A          253 IRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ  332 (516)
T ss_dssp             CCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEH
T ss_pred             cCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEch
Confidence            6899999999998       3      67999999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      +++++|+++|+++++++++|+| ++++++|||+++.+++++.++|++++++| ++++||...+. .|+|++|||+.++++
T Consensus       333 ~i~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~-~g~~~~Ptvl~~v~~  409 (516)
T 1uzb_A          333 GAYEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEG-EGYFIAPTVFTEVPP  409 (516)
T ss_dssp             HHHHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSS-SSCCBCCEEEESCCT
T ss_pred             HHHHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCC-CCcEECCEEEECCCC
Confidence            9999999999999999999999 99999999999999999999999999998 89999976322 589999999999999


Q ss_pred             CCceeee-------eeeEecCcccccC
Q psy7043         148 EMDCYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       148 ~~~i~~e-------pv~~v~~~~~ai~  167 (167)
                      +|++++|       +|+.+++++|||+
T Consensus       410 ~~~i~~eEiFGPVl~v~~~~~~~eAi~  436 (516)
T 1uzb_A          410 KARIAQEEIFGPVLSVIRVKDFAEALE  436 (516)
T ss_dssp             TSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred             CCHhhhccccCceEEEEEeCCHHHHHH
Confidence            9999998       3667777778773

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=8.2e-43  Score=291.45  Aligned_cols=167  Identities=22%  Similarity=0.395  Sum_probs=155.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       +++++|++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       219 v~~v~fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f  298 (478)
T 3ty7_A          219 VRMMSFTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAF  298 (478)
T ss_dssp             CCEEEECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHH
T ss_pred             cCEEEEECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHH
Confidence            6799999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CC-CCCceEeeEEEecCCCCCce
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPN-PT-IGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~-~~-~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||... +. ..|+|++|||+.+++++|++
T Consensus       299 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~  378 (478)
T 3ty7_A          299 LAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTI  378 (478)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHH
T ss_pred             HHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999432 21 25999999999999999999


Q ss_pred             eeee-------eeEecCcccccC
Q psy7043         152 YRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~ep-------v~~v~~~~~ai~  167 (167)
                      ++||       |+.+++++|||+
T Consensus       379 ~~eE~FGPvl~v~~~~~~~eAi~  401 (478)
T 3ty7_A          379 AQEEIFGPVMSVITYNDLDEAIQ  401 (478)
T ss_dssp             HHSCCCSSEEEEEEESSHHHHHH
T ss_pred             cCceeECceeEEEecCCHHHHHH
Confidence            9993       677788888873

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=7.4e-43  Score=293.49  Aligned_cols=163  Identities=29%  Similarity=0.400  Sum_probs=154.2

Q ss_pred             CceEEeecChhhh-------cc--CCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHH
Q psy7043           1 MRLFGLKNSFPVT-------QK--TQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYD   71 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~--~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~   71 (167)
                      |++|+||||+.+|       ++  ++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++++
T Consensus       229 vd~I~fTGS~~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d  308 (508)
T 3r64_A          229 PKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHD  308 (508)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHH
T ss_pred             ccEEEEECCHHHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHH
Confidence            6799999999998       34  89999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCce
Q psy7043          72 EFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDC  151 (167)
Q Consensus        72 ~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i  151 (167)
                      +|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||..    .|+|++|||+.+++++|++
T Consensus       309 ~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~----~g~~~~Ptvl~~v~~~~~i  384 (508)
T 3r64_A          309 EFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI----EGRLVHPHVFSDVTSDMEI  384 (508)
T ss_dssp             HHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE----ETTEECCEEEEEECTTSGG
T ss_pred             HHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC----CCcEEecEEEecCCCCChh
Confidence            999999999999999999999999999999999999999999999999999999976    3899999999999999999


Q ss_pred             eeee-------eeEecCcccccC
Q psy7043         152 YRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       152 ~~ep-------v~~v~~~~~ai~  167 (167)
                      ++||       |+.+++++|||+
T Consensus       385 ~~eEiFGPVl~v~~~~~~deAi~  407 (508)
T 3r64_A          385 AREEIFGPLISVLKADDEAHAAE  407 (508)
T ss_dssp             GTSCCCSSEEEEEEESSHHHHHH
T ss_pred             hcccccCceEEEEEeCCHHHHHH
Confidence            9993       667788888873

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=8.4e-43  Score=290.64  Aligned_cols=159  Identities=23%  Similarity=0.357  Sum_probs=148.4

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       197 vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  276 (469)
T 3sza_A          197 FDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQI  276 (469)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHH
T ss_pred             CCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHH
Confidence            6799999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++ .|+|.++++++||++++.+++++.++|     +|+++++||..+.  +|+|++|||+.+++++|++++
T Consensus       277 ~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~~--~g~~~~PTvl~~v~~~~~i~~  348 (469)
T 3sza_A          277 VEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGDA--ATRYIAPTILTDVDPQSPVMQ  348 (469)
T ss_dssp             HHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEET--TTTEECCEEEESCCTTSGGGT
T ss_pred             HHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccCC--CCceeCCeeecCCCCcchhhh
Confidence            99999999998 699999999999999999999999998     6999999998753  499999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       349 eEiFGPVl~v~~~~~~deAi~  369 (469)
T 3sza_A          349 EEIFGPVLPIVCVRSLEEAIQ  369 (469)
T ss_dssp             SCCCSSEEEEEECSSHHHHHH
T ss_pred             ccccCCeEEEEecCCHHHHHH
Confidence            9       3667778888773

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=5.5e-43  Score=292.94  Aligned_cols=163  Identities=26%  Similarity=0.381  Sum_probs=150.8

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       224 v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f  303 (485)
T 4dng_A          224 PRLISFTGSTAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEF  303 (485)
T ss_dssp             CSEEEEEECHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHH
T ss_pred             CCEEEEECCcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHH
Confidence            6799999999998       478999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||..    .|+|++|||+.+++++|++++
T Consensus       304 ~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~----~g~~~~Ptvl~~v~~~~~i~~  379 (485)
T 4dng_A          304 VEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR----VGNVLTPYVFVGADNNSKIAQ  379 (485)
T ss_dssp             HHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE----ETTEECCEEEESCCTTSHHHH
T ss_pred             HHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC----CCcEECCEEEecCCCCChhhc
Confidence            9999999999999999999999999999999999999999999999999999976    489999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       380 eE~FGPvl~v~~~~~~~eAi~  400 (485)
T 4dng_A          380 TELFAPIATIIKAGSDQEAID  400 (485)
T ss_dssp             CCCCSSEEEEEEESSHHHHHH
T ss_pred             CccccceEEEEEeCCHHHHHH
Confidence            8       3777788888873

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=9.4e-43  Score=292.38  Aligned_cols=162  Identities=23%  Similarity=0.375  Sum_probs=152.6

Q ss_pred             CceEEeecChhhh------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHH
Q psy7043           1 MRLFGLKNSFPVT------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFI   74 (167)
Q Consensus         1 ~~~v~ftGs~~~g------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~   74 (167)
                      |++|+||||+.+|      +. +||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|+
T Consensus       236 vd~I~FTGS~~~G~~i~~~aa-l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~  314 (501)
T 1uxt_A          236 VAAVSFTGSTEVGERVVKVGG-VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLV  314 (501)
T ss_dssp             CCEEEEESCHHHHHHHHHHHC-SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHH
T ss_pred             cCEEEEeCcHHHHHHHHHhcC-CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHH
Confidence            6899999999998      23 8999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCC-ceEeeEEEecCC---CCCc
Q psy7043          75 SKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGE-LYYEPTLITDIT---PEMD  150 (167)
Q Consensus        75 ~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g-~~~~Ptvl~~~~---~~~~  150 (167)
                      ++|+++++++++|+|.++++++||++++.+++++.++|++++++|+++++||..    .| +|++|||+.+++   ++|+
T Consensus       315 ~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~----~g~~~~~Ptvl~~v~~~~~~~~  390 (501)
T 1uxt_A          315 EEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR----LGPTYVQPTFVEAPADRVKDMV  390 (501)
T ss_dssp             HHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB----CSSSCBCCEEEECCHHHHTTSH
T ss_pred             HHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc----CCCceECCEEEeCCCCCCCcCH
Confidence            999999999999999999999999999999999999999999999999999976    37 999999999999   9999


Q ss_pred             eeee-------eeeEecCcccccC
Q psy7043         151 CYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e-------pv~~v~~~~~ai~  167 (167)
                      +++|       +|+.+++++|||+
T Consensus       391 i~~eEiFGPVl~v~~~~~~deAi~  414 (501)
T 1uxt_A          391 LYKREVFAPVALAVEVKDLDQAIE  414 (501)
T ss_dssp             HHHSCCCSSEEEEEEESSHHHHHH
T ss_pred             HHhCcccCceEEEEeeCCHHHHHH
Confidence            9999       3667778888773

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.1e-42  Score=291.24  Aligned_cols=166  Identities=20%  Similarity=0.424  Sum_probs=154.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcE-EEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANR-FLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~-v~v~~~i~~~   72 (167)
                      |++|+||||+++|       ++++||+++|||||||+||++|||++.+++.+++++|.|+||.|++++| +|||++ +++
T Consensus       220 v~~I~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~  298 (486)
T 1t90_A          220 IKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADE  298 (486)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHH
T ss_pred             CCEEEEeCCHHHHHHHHHHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHH
Confidence            5799999999998       4789999999999999999999999999999999999999999999999 999999 999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||.......|+|++|||+.+++++|+++
T Consensus       299 f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~  378 (486)
T 1t90_A          299 FMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIW  378 (486)
T ss_dssp             HHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHH
T ss_pred             HHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhh
Confidence            99999999999999999999999999999999999999999999999999999975321258999999999999999999


Q ss_pred             ee-------eeeEecCcccccC
Q psy7043         153 RF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e-------pv~~v~~~~~ai~  167 (167)
                      +|       +|+.+++++|||+
T Consensus       379 ~eEiFGPvl~v~~~~~~~eai~  400 (486)
T 1t90_A          379 KDEIFAPVLSVIRVKNLKEAIE  400 (486)
T ss_dssp             HSCCCSSEEEEEEESSHHHHHH
T ss_pred             cCcccCceEEEEEeCCHHHHHH
Confidence            99       3677777788773

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.4e-42  Score=287.22  Aligned_cols=165  Identities=18%  Similarity=0.214  Sum_probs=154.1

Q ss_pred             CceEEeecChhhh-------ccCCCce-eEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEeccc-HH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRP-KVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKR-YD   71 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v-~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i-~~   71 (167)
                      |++|+||||+.+|       +++++|+ +||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ++
T Consensus       218 v~~V~fTGS~~~g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d  297 (490)
T 3ju8_A          218 LDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGD  297 (490)
T ss_dssp             CSEEEEESCHHHHHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHH
T ss_pred             cCEEEEECcHHHHHHHHHHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHH
Confidence            6789999999998       4789998 8999999999999999999999999999999999999999999999996 99


Q ss_pred             HHHHHHHHHHHhhccCC-CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCc
Q psy7043          72 EFISKFSEKIKLLVVGD-GAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD  150 (167)
Q Consensus        72 ~f~~~l~~~~~~~~~g~-~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~  150 (167)
                      +|+++|+++++++++|+ |.++++++||+++..+++++.++|++++++|+++++||...+. +|+|++|||+. ++++|+
T Consensus       298 ~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~PTvl~-v~~~~~  375 (490)
T 3ju8_A          298 ALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPID-GAALLTPGILD-VSAVAE  375 (490)
T ss_dssp             HHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCST-TSCCCCCEEEE-CTTCSS
T ss_pred             HHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCC-CCCEEccEEEE-eCCCCc
Confidence            99999999999999999 9999999999999999999999999999999999999976543 69999999998 999999


Q ss_pred             eeee-------eeeEecCcccccC
Q psy7043         151 CYRF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       151 i~~e-------pv~~v~~~~~ai~  167 (167)
                      +++|       +|+.+++++|||+
T Consensus       376 i~~eEiFGPVl~v~~~~~~~eAi~  399 (490)
T 3ju8_A          376 RPDEEFFGPLLQVIRYSDFAAAIR  399 (490)
T ss_dssp             CCCCCCCSSEEEEEEESSHHHHHH
T ss_pred             cccccccccEEEEEEeCCHHHHHH
Confidence            9999       3677778888773

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=3.5e-42  Score=287.45  Aligned_cols=161  Identities=24%  Similarity=0.339  Sum_probs=151.5

Q ss_pred             CceEEeecChhhh------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHH
Q psy7043           1 MRLFGLKNSFPVT------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFI   74 (167)
Q Consensus         1 ~~~v~ftGs~~~g------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~   74 (167)
                      |++|+||||+.+|      +. +||++||||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|+
T Consensus       223 v~~V~fTGS~~~g~~i~~~aa-~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~  301 (475)
T 1euh_A          223 VNFINFTGSTGIGERIGKMAG-MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELV  301 (475)
T ss_dssp             CCEEEEESCHHHHHHHHHHTT-TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHH
T ss_pred             cCEEEEECchHHHHHHHHhcC-CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHH
Confidence            6799999999998      23 8999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee
Q psy7043          75 SKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF  154 (167)
Q Consensus        75 ~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e  154 (167)
                      ++|+++++++++|+|.+ ++++||++++.+++++.+++++++++|+++++||..    .|+|++|||+.+++++|++++|
T Consensus       302 ~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~----~g~~~~Ptvl~~v~~~~~~~~e  376 (475)
T 1euh_A          302 EKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR----EGNLICPILFDKVTTDMRLAWE  376 (475)
T ss_dssp             HHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE----ETTEECCEEEESCCTTSGGGTS
T ss_pred             HHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc----CCceeCCEEEeCCCCcCHHHcC
Confidence            99999999999999999 999999999999999999999999999999999975    3899999999999999999998


Q ss_pred             -------eeeEecCcccccC
Q psy7043         155 -------PCRLVDTIPTYIR  167 (167)
Q Consensus       155 -------pv~~v~~~~~ai~  167 (167)
                             +|+.+++++|||+
T Consensus       377 E~FGPvl~v~~~~~~~eai~  396 (475)
T 1euh_A          377 EPFGPVLPIIRVTSVEEAIE  396 (475)
T ss_dssp             CCCSSEEEEEEESCHHHHHH
T ss_pred             ccccceEEEEecCCHHHHHH
Confidence                   3667778888873

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=8.2e-42  Score=288.68  Aligned_cols=165  Identities=16%  Similarity=0.233  Sum_probs=149.9

Q ss_pred             CceEEeecChhhh-------c--cCCCceeEeCCCCCeeeEeCCC-----CHHHHHHHHHHhhhhhcCCceecCcEEEEe
Q psy7043           1 MRLFGLKNSFPVT-------Q--KTQPRPKVMPREASLNMVFESA-----NIDLAIQGALASKFRNCGQTCISANRFLIH   66 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~--~~~~~v~lElgGknp~iV~~da-----d~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~   66 (167)
                      |++|+||||+.+|       +  +++||++||||||||+||++||     |++.+++.+++++|.|+||.|++++|+|||
T Consensus       229 vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~  308 (534)
T 2y53_A          229 FDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVP  308 (534)
T ss_dssp             TCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEE
T ss_pred             cCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEe
Confidence            5799999999998       1  7899999999999999999999     999999999999999999999999999999


Q ss_pred             cccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC-----CCCCceEeeEE
Q psy7043          67 EKRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP-----TIGELYYEPTL  141 (167)
Q Consensus        67 ~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~-----~~~g~~~~Ptv  141 (167)
                      ++++++|+++|+++++++++|+|.+++++|||++++.+++++.++|+++ .+|+++++||....     ..+|+|++|||
T Consensus       309 ~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTv  387 (534)
T 2y53_A          309 EAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHL  387 (534)
T ss_dssp             GGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEE
T ss_pred             ccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEE
Confidence            9999999999999999999999999999999999999999999999999 68999999987531     12589999999


Q ss_pred             EecCCCC--Cceeee----e---eeEec---Cc-----cccc
Q psy7043         142 ITDITPE--MDCYRF----P---CRLVD---TI-----PTYI  166 (167)
Q Consensus       142 l~~~~~~--~~i~~e----p---v~~v~---~~-----~~ai  166 (167)
                      +.+++++  |++++|    |   |+.++   ++     +|||
T Consensus       388 l~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi  429 (534)
T 2y53_A          388 FVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAV  429 (534)
T ss_dssp             EECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHH
T ss_pred             EEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHH
Confidence            9999987  689998    3   56666   66     6766

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=1.4e-40  Score=296.37  Aligned_cols=165  Identities=18%  Similarity=0.267  Sum_probs=153.2

Q ss_pred             CceEEeecChhhh-------c------cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------Q------KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~------~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|+||||+.+|       +      +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+
T Consensus       746 v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~  825 (1026)
T 4f9i_A          746 ISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLD  825 (1026)
T ss_dssp             EEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEG
T ss_pred             CCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecH
Confidence            5789999999998       2      47899999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      +++++|+++|+++++++++|+|.++++++||+|++.+++++.++|++++++| ++++||..++. .|+|++|||+.++++
T Consensus       826 ~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~-~G~fv~PTvl~~v~~  903 (1026)
T 4f9i_A          826 AVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAG-EGYFVPMTIIGGIKP  903 (1026)
T ss_dssp             GGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSS-SSCCCCCEEEESCCT
T ss_pred             HHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCC-CCceecceeeecCCC
Confidence            9999999999999999999999999999999999999999999999999998 99999976543 499999999999999


Q ss_pred             CCceeee----e---eeEecCcccccC
Q psy7043         148 EMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       148 ~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      +|++++|    |   |+.+++++|||+
T Consensus       904 ~~~i~~eEiFGPVl~V~~~~d~deAI~  930 (1026)
T 4f9i_A          904 EHRIAQEEIFGPVLAVMRAKDFDQAIE  930 (1026)
T ss_dssp             TSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred             CccccCceecCcEEEEEEeCCHHHHHH
Confidence            9999998    3   566777787763

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=3.3e-40  Score=274.39  Aligned_cols=157  Identities=17%  Similarity=0.260  Sum_probs=144.0

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+.+|       ++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       207 vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  286 (457)
T 3lns_A          207 FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDAL  286 (457)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHH
T ss_pred             CCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHH
Confidence            6899999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|++++++++   |.++  ++||++++.+++++.++|+++   ++++++||..+.  +|+|++|||+.+++++|++++
T Consensus       287 ~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~~--~g~~~~Ptvl~~v~~~~~i~~  356 (457)
T 3lns_A          287 LERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQADV--SKRALSATVVDGVEWNDPLMS  356 (457)
T ss_dssp             HHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEEG--GGTEECCEEEESCCTTSGGGS
T ss_pred             HHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccCC--CCceeCCEEEecCCCCChhhc
Confidence            999999999987   5665  999999999999999999986   359999997643  489999999999999999999


Q ss_pred             ee-------eeEecCcccccC
Q psy7043         154 FP-------CRLVDTIPTYIR  167 (167)
Q Consensus       154 ep-------v~~v~~~~~ai~  167 (167)
                      ||       |+.+++++|||+
T Consensus       357 eEiFGPVl~v~~~~~~deAi~  377 (457)
T 3lns_A          357 EELFGPILPVLEFDSVRTAID  377 (457)
T ss_dssp             SCCCSSEEEEEEESCHHHHHH
T ss_pred             CcccCcEEEEEEeCCHHHHHH
Confidence            93       667788888873

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=1.5e-37  Score=276.50  Aligned_cols=160  Identities=16%  Similarity=0.189  Sum_probs=145.8

Q ss_pred             CceEEeecChhhh-------c---cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccH
Q psy7043           1 MRLFGLKNSFPVT-------Q---KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRY   70 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~---~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~   70 (167)
                      |++|+||||+.+|       +   .+++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++++|||++++
T Consensus       728 Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~  807 (1001)
T 3haz_A          728 IAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVA  807 (1001)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHH
T ss_pred             cCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHH
Confidence            6799999999998       2   25899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCc
Q psy7043          71 DEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMD  150 (167)
Q Consensus        71 ~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~  150 (167)
                      ++|+++|+++++++++|+|.++++++||+++..+++++.++|+++.++| ++ +||..++  .|+|++|||+.+  +++.
T Consensus       808 d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~~--~G~fv~PTvl~~--~~~~  881 (1001)
T 3haz_A          808 DRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPAP--EGCFVAPHIFEL--TEAG  881 (1001)
T ss_dssp             HHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCCC--SSSCCCCEEEEC--SSGG
T ss_pred             HHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccCC--CCcEEeeEEecC--CCHH
Confidence            9999999999999999999999999999999999999999999999888 88 8887654  499999999974  6788


Q ss_pred             eeee----eeeEecCc-----cccc
Q psy7043         151 CYRF----PCRLVDTI-----PTYI  166 (167)
Q Consensus       151 i~~e----pv~~v~~~-----~~ai  166 (167)
                      +++|    ||++|..|     +|||
T Consensus       882 ~~~eEiFGPVL~V~~~~~~~ldeAI  906 (1001)
T 3haz_A          882 QLTEEVFGPILHVVRYRPENLERVL  906 (1001)
T ss_dssp             GCCSCCCSSEEEEEEECGGGHHHHH
T ss_pred             HHhccccCcEEEEEEeCCCCHHHHH
Confidence            9988    66666544     5565

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=2.8e-36  Score=253.67  Aligned_cols=152  Identities=13%  Similarity=0.123  Sum_probs=137.5

Q ss_pred             CceEEeecChhhh-------ccCC--CceeEeCCCCCeeeEeCCCCHH--HHHHHHHHhhhhhcCCceecCcEEEEecc-
Q psy7043           1 MRLFGLKNSFPVT-------QKTQ--PRPKVMPREASLNMVFESANID--LAIQGALASKFRNCGQTCISANRFLIHEK-   68 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~--~~v~lElgGknp~iV~~dad~~--~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~-   68 (167)
                      |++|+||||+.+|       ++++  ||++||||||||+||++|||++  .+++.+++++|.|+||.|++++|+|||++ 
T Consensus       222 v~~I~FTGS~~~G~~i~~~aa~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~  301 (510)
T 1ez0_A          222 IKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP  301 (510)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSH
T ss_pred             CCEEEEeCcHHHHHHHHHHhhccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCc
Confidence            6899999999998       3554  9999999999999999999999  99999999999999999999999999999 


Q ss_pred             cHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHH-CCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          69 RYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIK-KGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        69 i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~-~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      ++++|+++|++++++++.          ||++++.+.+++.++|+++++ +|+++++||.   .  |+|++|||+.++++
T Consensus       302 i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~--g~~~~Ptvl~~~~~  366 (510)
T 1ez0_A          302 ETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---E--SPCVASALFVTSSE  366 (510)
T ss_dssp             HHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---C--TTSBCCEEEEEEHH
T ss_pred             cHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---C--CCEecCEEEEecCC
Confidence            999999999999998863          688999999999999999984 7999999997   2  89999999998887


Q ss_pred             C---Cceeee----e---eeEecCcccccC
Q psy7043         148 E---MDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       148 ~---~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      +   |++++|    |   |+.+++++|||+
T Consensus       367 ~~~~~~i~~eEiFGPVl~v~~~~~~deai~  396 (510)
T 1ez0_A          367 NWRKHPAWEEEIFGPQSLIVVCENVADMLS  396 (510)
T ss_dssp             HHHHCGGGGSCCCSSEEEEEEESSHHHHHH
T ss_pred             ccccCHHHcCCccCCeEEEEEeCCHHHHHH
Confidence            7   999999    3   666777777763

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.9e-36  Score=253.73  Aligned_cols=154  Identities=15%  Similarity=0.079  Sum_probs=137.2

Q ss_pred             CceEEeecChhhh-------ccCC--CceeEeCCCCCeeeEeCCC---CHHHHHHHHHHhhhhhcCCceecCcEEEEecc
Q psy7043           1 MRLFGLKNSFPVT-------QKTQ--PRPKVMPREASLNMVFESA---NIDLAIQGALASKFRNCGQTCISANRFLIHEK   68 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~--~~v~lElgGknp~iV~~da---d~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~   68 (167)
                      |++|+||||+.+|       ++++  +|+++|||||||+||++||   |++.+++.+++++|.|+||.|++++|+|||++
T Consensus       255 v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~  334 (528)
T 3v4c_A          255 IKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEG  334 (528)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESS
T ss_pred             CCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecc
Confidence            6899999999998       4677  9999999999999999999   88999999999999999999999999999997


Q ss_pred             -cHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          69 -RYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        69 -i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                       ++++|+++|++++++++.|      +.+||+++..+.+++..+++   .+|+++++||..    .|+|++|||+.++++
T Consensus       335 ~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~----~g~~~~PTvl~~~~~  401 (528)
T 3v4c_A          335 ADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES----SGRDASPNLFETTGA  401 (528)
T ss_dssp             HHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC----CTTEECCEEEEEEHH
T ss_pred             cHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc----CCceeccEEEEecCc
Confidence             9999999999999988643      67899999888888877753   479999999975    499999999998888


Q ss_pred             C---Cceeeee-------eeEecCcccccC
Q psy7043         148 E---MDCYRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       148 ~---~~i~~ep-------v~~v~~~~~ai~  167 (167)
                      +   |++++||       |+.+++++|||+
T Consensus       402 ~~~~~~i~~eEiFGPVl~V~~~~~~deAi~  431 (528)
T 3v4c_A          402 QFLADHALGEEVFGPLGLVVRVGSPAEMEE  431 (528)
T ss_dssp             HHHHCGGGGCCCSSSEEEEEEESSHHHHHH
T ss_pred             ccccChhhcccccCCeEEEEecCCHHHHHH
Confidence            7   8999993       667778888874

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=99.97  E-value=3.5e-33  Score=232.51  Aligned_cols=150  Identities=14%  Similarity=0.173  Sum_probs=134.7

Q ss_pred             CceEEeecChhhh---ccCCCceeEeCC-CCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QKTQPRPKVMPR-EASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~~~~~v~lElg-Gknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |++|.||||+.+.   ++++||+ +|+| ||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++|++|+++
T Consensus       192 vd~I~fTGs~~v~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~  270 (464)
T 3k9d_A          192 TAVILATGGSAMVKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAE  270 (464)
T ss_dssp             EEEEEECSCHHHHHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHH
T ss_pred             CCEEEEeCChHHHHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHH
Confidence            4789999999875   6889999 8999 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHH-------HhhccCCCC-CCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCC
Q psy7043          77 FSEKI-------KLLVVGDGA-VSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPE  148 (167)
Q Consensus        77 l~~~~-------~~~~~g~~~-~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~  148 (167)
                      |+++.       +.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||..               +++++
T Consensus       271 l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~---------------~v~~~  335 (464)
T 3k9d_A          271 FRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET---------------KVGAK  335 (464)
T ss_dssp             HHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC---------------CCSTT
T ss_pred             HHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC---------------CCCCC
Confidence            99985       466788877 67899999999999999999999888899999998863               46778


Q ss_pred             Cceeee------eeeEecCccccc
Q psy7043         149 MDCYRF------PCRLVDTIPTYI  166 (167)
Q Consensus       149 ~~i~~e------pv~~v~~~~~ai  166 (167)
                      +++.+|      +|+.+++++|||
T Consensus       336 ~~~~~E~fgPVl~v~~~~~~~eAi  359 (464)
T 3k9d_A          336 IPYSREKLAPILAFYTAETWQEAC  359 (464)
T ss_dssp             CGGGSCCCSSEEEEEEESSHHHHH
T ss_pred             CcccccccCceEEEEEeCCHHHHH
Confidence            888877      477778888886

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=99.97  E-value=2.3e-33  Score=232.93  Aligned_cols=151  Identities=15%  Similarity=0.181  Sum_probs=128.9

Q ss_pred             CceEEeecChhhh---ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKF   77 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l   77 (167)
                      |++|.||||+.++   ++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|
T Consensus       187 v~~V~fTGs~~~~~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l  266 (452)
T 3my7_A          187 IALILATGGPGMVKAAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERF  266 (452)
T ss_dssp             CCEEEECSCHHHHHHHHTSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHH
T ss_pred             ccEEEEECcHHHHHHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHH
Confidence            6789999999876   5789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC--CCCCceEeeEE-------EecCCCC
Q psy7043          78 SEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNP--TIGELYYEPTL-------ITDITPE  148 (167)
Q Consensus        78 ~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~--~~~g~~~~Ptv-------l~~~~~~  148 (167)
                      +++               +||++++.+++++.++++.+...|+++ .|+....  ...|+|++||+       +.+++++
T Consensus       267 ~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~  330 (452)
T 3my7_A          267 ASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYD  330 (452)
T ss_dssp             HTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTT
T ss_pred             HHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCc
Confidence            875               289999999999999998766667776 4665321  01489999997       7789999


Q ss_pred             Cceeee---e---eeEecCcccccC
Q psy7043         149 MDCYRF---P---CRLVDTIPTYIR  167 (167)
Q Consensus       149 ~~i~~e---p---v~~v~~~~~ai~  167 (167)
                      +++++|   |   |+.+++++|||+
T Consensus       331 ~~~~~E~FgPVl~v~~~~~~~eAi~  355 (452)
T 3my7_A          331 DAFAHEKLSPTLGMFRADNFEDAVA  355 (452)
T ss_dssp             CGGGSCCSSSEEEEEEESSHHHHHH
T ss_pred             chhhcCccCcEEEEEEeCCHHHHHH
Confidence            999999   4   566677788763

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=99.95  E-value=6.1e-30  Score=213.07  Aligned_cols=134  Identities=13%  Similarity=0.032  Sum_probs=102.3

Q ss_pred             CceEEeecChhhh----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |++|+||||+.+|    ..-+||+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++ ++|+++
T Consensus       211 vd~I~fTGS~~~g~~i~~~a~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~  288 (468)
T 1vlu_A          211 IDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEV  288 (468)
T ss_dssp             CCEEEEESCHHHHHHHHHTCCSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHH
T ss_pred             cCEEEEECCHHHHHHHHHhcCCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHH
Confidence            6799999999999    23389999999999999999999999999999999999999 99999999999999 999999


Q ss_pred             HHHHHHhhcc---CCCCCCCCccCccCCHHHHHHHHHH-HHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          77 FSEKIKLLVV---GDGAVSGVNVGPLINKAQLTKVTRI-VDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        77 l~~~~~~~~~---g~~~~~~~~~gp~i~~~~~~~i~~~-i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++++++++   |+|.+                 .++ |+++.    ++++||.      |  ++||++  ++++|+++
T Consensus       289 l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~------g--~~Ptvl--v~~~~~i~  337 (468)
T 1vlu_A          289 LENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE------A--IQCKTV--DADEEQDF  337 (468)
T ss_dssp             HHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH------H--HHTTBC----------
T ss_pred             HHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC------C--CCCcee--eCCCchhh
Confidence            9999999987   76532                 345 66665    3566664      4  689987  78999999


Q ss_pred             ee-------eeeEecCcccccC
Q psy7043         153 RF-------PCRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e-------pv~~v~~~~~ai~  167 (167)
                      +|       +|+.+++++|||+
T Consensus       338 ~eEiFGPVl~v~~~~~~deAi~  359 (468)
T 1vlu_A          338 DKEFLSLDLAAKFVTSTESAIQ  359 (468)
T ss_dssp             -----CCCCEEEECCSHHHHHH
T ss_pred             hcCccCceEEEEEeCCHHHHHH
Confidence            99       3777888888874

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=99.94  E-value=1.2e-27  Score=199.04  Aligned_cols=122  Identities=20%  Similarity=0.171  Sum_probs=96.5

Q ss_pred             CceEEeecChhhh------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHH
Q psy7043           1 MRLFGLKNSFPVT------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFI   74 (167)
Q Consensus         1 ~~~v~ftGs~~~g------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~   74 (167)
                      |++|+||||+.+|      +. +||++||||||||+||++|||++.|++.+++++|.| ||.|++++|+|||+++++   
T Consensus       220 vd~I~FTGS~~~G~~i~~~aa-l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d---  294 (463)
T 2h5g_A          220 IDLIIPRGSSQLVRDIQKAAK-GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR---  294 (463)
T ss_dssp             CSEEEEESCHHHHHHHHHHCS-SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT---
T ss_pred             cCEEEEECCHHHHHHHHHhcC-CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc---
Confidence            6899999999998      23 899999999999999999999999999999999999 999999999999999998   


Q ss_pred             HHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee
Q psy7043          75 SKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF  154 (167)
Q Consensus        75 ~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e  154 (167)
                                            ||+     ++   ++++.++++|++++.|+....  .++|+        +++|++++|
T Consensus       295 ----------------------~p~-----~~---~~i~~~~~~Ga~v~~G~~~~~--~g~~~--------~~~~~i~~e  334 (463)
T 2h5g_A          295 ----------------------TPL-----FD---QIIDMLRVEQVKIHAGPKFAS--YLTFS--------PSEVKSLRT  334 (463)
T ss_dssp             ----------------------SHH-----HH---HHHHHHHHTTCEEEECHHHHC-------------------CCSSC
T ss_pred             ----------------------hHH-----HH---HHHHHHHhCCCEEEeCCcccc--cCccC--------CCCchHHhc
Confidence                                  343     33   357888899999985544221  35553        578999999


Q ss_pred             e-------eeEecCcccccC
Q psy7043         155 P-------CRLVDTIPTYIR  167 (167)
Q Consensus       155 p-------v~~v~~~~~ai~  167 (167)
                      |       |+.++++||||+
T Consensus       335 E~FgPvl~v~~~~~~deAi~  354 (463)
T 2h5g_A          335 EYGDLELCIEVVDNVQDAID  354 (463)
T ss_dssp             CCCSSEEEEEEESSHHHHHH
T ss_pred             cccCceEEEEEeCCHHHHHH
Confidence            3       667788888874

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=99.93  E-value=2.7e-27  Score=196.03  Aligned_cols=125  Identities=14%  Similarity=0.120  Sum_probs=95.8

Q ss_pred             CceEEeecChhhh----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |++|+||||+.+|    ...+||++||||||||+||++|||++.|++.+++++|.|+| .|++++|+|||++++++|+++
T Consensus       220 vd~V~fTGs~~vg~~v~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~  298 (444)
T 4ghk_A          220 VDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSP  298 (444)
T ss_dssp             CSEEEECSCHHHHHHHHHHCCSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHH
T ss_pred             ccEEEEECcHHHHHHHHHhCCCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHH
Confidence            6899999999998    23389999999999999999999999999999999999999 999999999999999999999


Q ss_pred             HHHHHHhhcc---CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          77 FSEKIKLLVV---GDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        77 l~~~~~~~~~---g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      |+++++++++   |+|.                 ..++++++. .               |      ++  ++++|++++
T Consensus       299 l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~-~---------------G------~~--~~~~~~~~~  337 (444)
T 4ghk_A          299 LGRLYREKGVELRVDAD-----------------ARAVLEAAG-V---------------G------PL--VDATDEDWR  337 (444)
T ss_dssp             HHHHHHHTTCEEEECHH-----------------HHHHHHHTT-C---------------C------CC--EECCSGGGT
T ss_pred             HHHHHHHcCCeecCCHH-----------------HHHHHHhcc-c---------------C------cc--cCCCchhhh
Confidence            9999999987   6532                 135566542 1               2      12  356789999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.++++||||+
T Consensus       338 eEiFGPVl~v~~~~~~deAi~  358 (444)
T 4ghk_A          338 TEYLAPVLAIKIVDGIDAAIE  358 (444)
T ss_dssp             CC---CEEEEEEESSHHHHHH
T ss_pred             ccccCceEEEEEeCCHHHHHH
Confidence            9       3667788888874

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=99.93  E-value=1.5e-27  Score=196.69  Aligned_cols=123  Identities=20%  Similarity=0.285  Sum_probs=102.3

Q ss_pred             CceEEeecChhhh----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |++|+||||+++|    ..-.||++||||||||+||++|||++.|++.+++++|.|+| .|++++|+|||++++|+|+++
T Consensus       208 v~~I~fTGS~~~G~~i~~~a~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~  286 (427)
T 1o20_A          208 LSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPV  286 (427)
T ss_dssp             CSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHH
T ss_pred             ccEEEeCCChHHHHHHHHhcCCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHH
Confidence            6899999999999    23379999999999999999999999999999999999999 999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee--
Q psy7043          77 FSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF--  154 (167)
Q Consensus        77 l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e--  154 (167)
                      |++++++++++                                   +.||.+.   .++ + |||   ++++|++++|  
T Consensus       287 l~~~~~~~~~~-----------------------------------~~gg~~~---~~~-~-Ptl---~~~~~~i~~eEi  323 (427)
T 1o20_A          287 IVEELRKHGVE-----------------------------------VRGCEKT---REI-V-PDV---VPATEDDWPTEY  323 (427)
T ss_dssp             HHHHHHHTTCE-----------------------------------EEECHHH---HHH-S-TTS---EECCGGGTTCCC
T ss_pred             HHHHHHHcCCe-----------------------------------eecChhh---hhh-C-Ccc---cCCCcchhhccc
Confidence            99999988642                                   1233221   133 3 885   3457889999  


Q ss_pred             -----eeeEecCcccccC
Q psy7043         155 -----PCRLVDTIPTYIR  167 (167)
Q Consensus       155 -----pv~~v~~~~~ai~  167 (167)
                           +|+.+++++|||+
T Consensus       324 FGPVl~v~~~~~~deAi~  341 (427)
T 1o20_A          324 LDLIIAIKVVKNVDEAIE  341 (427)
T ss_dssp             CSSEEEEEEESSHHHHHH
T ss_pred             ccceEEEEEECCHHHHHH
Confidence                 3777788888873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	167
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	7e-26
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	5e-25
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-24
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	3e-18
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	7e-17
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-11
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	5e-10
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	2e-09

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  100 bits (249), Expect = 7e-26
 Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 1/126 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S N++   A++D A++ A  + F N GQ   + +R  + E  YDEF+ +   + K  VVG
Sbjct: 267 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG 326

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +   S    GP +++ Q  K+   ++   ++GAK+L GG      G  + +PT+  D+  
Sbjct: 327 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG-YFIQPTVFGDVQD 385

Query: 148 EMDCYR 153
            M   +
Sbjct: 386 GMTIAK 391

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 97.8 bits (243), Expect = 5e-25
 Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 1/126 (0%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  +VF  A++D A++ A    F + GQ CI+A+R  + E  YDEF+ +  E+ K  V+G
Sbjct: 267 SPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 326

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +    GV+ GP I+K Q  K+  +++   K+GAK+  GG P    G  + +PT+ +D+T 
Sbjct: 327 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKG-YFIQPTVFSDVTD 385

Query: 148 EMDCYR 153
           +M   +
Sbjct: 386 DMRIAK 391

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score = 95.2 bits (236), Expect = 4e-24
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S  ++F+   ++ A++GAL + F   GQ C +  R  +  +   +F+ +  ++ K +VVG
Sbjct: 268 SPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVG 327

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGE-----LYYEPTLI 142
           D  ++   +G LI+K QL KV   V  A K+GA+VL GG+P            +  P ++
Sbjct: 328 DPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVL 387

Query: 143 TDITPEMDCYR 153
            +   +M C +
Sbjct: 388 DNCRDDMTCVK 398

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 78.4 bits (192), Expect = 3e-18
 Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 3/124 (2%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V E+A+ DLA +G + S +   GQ C +A+R ++ +  Y+  + +  ++ + L VG  
Sbjct: 295 IIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA 354

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                ++GP+++  Q  KV   ++    +G  VL G +        +  PT+ T++ P+ 
Sbjct: 355 E-ENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGE--GYFIAPTVFTEVPPKA 411

Query: 150 DCYR 153
              +
Sbjct: 412 RIAQ 415

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score = 74.6 bits (182), Expect = 7e-17
 Identities = 32/128 (25%), Positives = 58/128 (45%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +V E A++DLA        +   GQ C +    L     Y + + + ++++  L VGD 
Sbjct: 268 AIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 327

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
               V+VGPLI+ + + ++   ++DA++KG +VL GG+                D   +M
Sbjct: 328 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDM 387

Query: 150 DCYRFPCR 157
             Y+    
Sbjct: 388 VLYKREVF 395

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.4 bits (140), Expect = 3e-11
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
           S   V +  ++D+A +     KF N GQTC++ +  L      ++ + K  + +K    G
Sbjct: 213 SPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YG 271

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           + A    + G +IN     +V  ++D+                     Y  PT++ D+ P
Sbjct: 272 EDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQSSR-------YIAPTILVDVDP 324

Query: 148 EMDCYR 153
           +    +
Sbjct: 325 QSPVMQ 330

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score = 54.9 bits (131), Expect = 5e-10
 Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 28  SLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVG 87
              +V E A+++L  +  +A  F   GQ C +  R L+ E   DE + K  EK+  L +G
Sbjct: 254 DSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 313

Query: 88  DGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP 147
           +      ++ PLI+      V  +++DA  KGA  L   K           P L   +T 
Sbjct: 314 NP-EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGN----LICPILFDKVTT 368

Query: 148 EMDCYRFPCR 157
           +M        
Sbjct: 369 DMRLAWEEPF 378

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 31/128 (24%), Positives = 53/128 (41%)

Query: 30  NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISKFSEKIKLLVVGDG 89
            +VF+ A+I+  ++G     + N GQ C +A R    +  YD  + K    +  L  G  
Sbjct: 253 VIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAP 312

Query: 90  AVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEM 149
                 +GPL + A L +V + V++A   G   ++ G         YY PTL+     + 
Sbjct: 313 DDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDD 372

Query: 150 DCYRFPCR 157
              +    
Sbjct: 373 AIVQKEVF 380

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	167
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	99.98
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	99.94
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	99.64
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	99.36

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=2.1e-43  Score=294.06  Aligned_cols=166  Identities=28%  Similarity=0.444  Sum_probs=155.7

Q ss_pred             CceEEeecChhhh-------c-cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT-------Q-KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~-~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|.||||+.+|       + .++||+++|||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++
T Consensus       232 v~~i~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~  311 (494)
T d1bxsa_         232 VDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDE  311 (494)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHH
T ss_pred             cCEEEecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHH
Confidence            6899999999998       2 4699999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |+++|+++++++++|+|.++++++||++++.+++++.++|++|+++|+++++||..... .|+|++|||+.+++++|+++
T Consensus       312 f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~  390 (494)
T d1bxsa_         312 FVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGN-KGYFIQPTVFSDVTDDMRIA  390 (494)
T ss_dssp             HHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECS-SSCEECCEEEESCCTTSHHH
T ss_pred             HHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCC-CceeEcCEEEeCCCCCcHHH
Confidence            99999999999999999999999999999999999999999999999999999976544 69999999999999999999


Q ss_pred             eee-------eeEecCcccccC
Q psy7043         153 RFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~ep-------v~~v~~~~~ai~  167 (167)
                      +||       |+.+++++|||+
T Consensus       391 ~~E~FGPvl~v~~~~~~~eai~  412 (494)
T d1bxsa_         391 KEEIFGPVQQIMKFKSLDDVIK  412 (494)
T ss_dssp             HSCCCSSEEEEEEECCHHHHHH
T ss_pred             hccccCceEEEEEECCHHHHHH
Confidence            993       677777788774

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=3.5e-43  Score=292.73  Aligned_cols=166  Identities=24%  Similarity=0.363  Sum_probs=156.2

Q ss_pred             CceEEeecChhhh--------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHH
Q psy7043           1 MRLFGLKNSFPVT--------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDE   72 (167)
Q Consensus         1 ~~~v~ftGs~~~g--------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~   72 (167)
                      |++|+||||+++|        .+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++
T Consensus       232 v~~v~fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~  311 (494)
T d1o04a_         232 VDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDE  311 (494)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHH
T ss_pred             cCEEEEeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHH
Confidence            6899999999987        37899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          73 FISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        73 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      |++++++++..+++|+|.++++++||++++.+++++.++|++|+++|+++++||..... .|+|++|||+.+++++|+++
T Consensus       312 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~  390 (494)
T d1o04a_         312 FVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD-RGYFIQPTVFGDVQDGMTIA  390 (494)
T ss_dssp             HHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCS-SSSCBCCEEEESCCTTSHHH
T ss_pred             HHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-CCceEcCEEEeCCCCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999987654 68999999999999999999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       391 ~eE~FGPvl~v~~~~~~~eai~  412 (494)
T d1o04a_         391 KEEIFGPVMQILKFKTIEEVVG  412 (494)
T ss_dssp             HSCCCSSEEEEEEECCHHHHHH
T ss_pred             hccccCceEEEEEeCCHHHHHH
Confidence            98    3   667778888773

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=1e-41  Score=284.36  Aligned_cols=167  Identities=26%  Similarity=0.454  Sum_probs=156.5

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|+||||+++|       ++++||+++|||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|
T Consensus       234 v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~  313 (503)
T d1a4sa_         234 VAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQF  313 (503)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHH
T ss_pred             cCEEEEeCCHHHHHHHHHHhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhH
Confidence            6799999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC-----CCCceEeeEEEecCCCC
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPT-----IGELYYEPTLITDITPE  148 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~-----~~g~~~~Ptvl~~~~~~  148 (167)
                      ++++.+.++++++|+|.++.+++||++++.+++++.+++++++++|+++++||.....     ..|+|++|||+.+++++
T Consensus       314 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~  393 (503)
T d1a4sa_         314 LEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDD  393 (503)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTT
T ss_pred             HHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCC
Confidence            9999999999999999999999999999999999999999999999999999975432     26899999999999999


Q ss_pred             Cceeeee-------eeEecCcccccC
Q psy7043         149 MDCYRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       149 ~~i~~ep-------v~~v~~~~~ai~  167 (167)
                      |++++||       |+.+++++|||+
T Consensus       394 ~~~~~~E~FgPvl~v~~~~~~~eai~  419 (503)
T d1a4sa_         394 MTCVKEEIFGPVMSVLPFDTEEEVLQ  419 (503)
T ss_dssp             SHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred             CHHHhccccCceEEEEEcCCHHHHHH
Confidence            9999993       777788888773

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-41  Score=280.20  Aligned_cols=166  Identities=23%  Similarity=0.393  Sum_probs=154.1

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      |++|.||||+++|       ++++||+++|||||||+||++|||++.+++.+++++|.|+||.|++++|+|||+++||+|
T Consensus       217 i~~v~fTGS~~~G~~i~~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~  296 (474)
T d1wnda_         217 VRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTL  296 (474)
T ss_dssp             EEEEEEESCHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHH
T ss_pred             cCEEEeeCCHHHHHHHHHhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhh
Confidence            5789999999998       589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCE-EEeCCccCCCCCCceEeeEEEecCCCCCcee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAK-VLLGGKPNPTIGELYYEPTLITDITPEMDCY  152 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~-v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~  152 (167)
                      +++|+++++++++|++.++++.+||+++..+.+++..++++++.+|+. ++.|+..+.. .|+|++|||+.+++++|+++
T Consensus       297 ~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~-~g~~~~Ptil~~~~~~~~~~  375 (474)
T d1wnda_         297 VEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG-NGYYYAPTLLAGALQDDAIV  375 (474)
T ss_dssp             HHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSS-SSCCBCCEEEECCCTTSHHH
T ss_pred             hhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCC-CceEEeeeEeecccccccce
Confidence            999999999999999999999999999999999999999999999985 5566665543 79999999999999999999


Q ss_pred             eee-------eeEecCcccccC
Q psy7043         153 RFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~ep-------v~~v~~~~~ai~  167 (167)
                      +||       |+.+++++|||+
T Consensus       376 ~eE~FGPVl~v~~~~~~deai~  397 (474)
T d1wnda_         376 QKEVFGPVVSVTPFDNEEQVVN  397 (474)
T ss_dssp             HSCCCSSEEEEEEECCHHHHHH
T ss_pred             eecccCCeEEEEEeCCHHHHHH
Confidence            993       777778888773

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.8e-40  Score=277.53  Aligned_cols=164  Identities=24%  Similarity=0.395  Sum_probs=148.9

Q ss_pred             CceEEeecChhhh-------c------cCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEec
Q psy7043           1 MRLFGLKNSFPVT-------Q------KTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHE   67 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~------~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~   67 (167)
                      |++|+||||+++|       +      .++||+++|||||||+||++|||++.+++.+++++|.|+||.|++++|+|||+
T Consensus       253 v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~  332 (516)
T d1uzba_         253 IRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQ  332 (516)
T ss_dssp             CCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEH
T ss_pred             cCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCcccccc
Confidence            6899999999998       1      67899999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCC
Q psy7043          68 KRYDEFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITP  147 (167)
Q Consensus        68 ~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~  147 (167)
                      +++++|+++++++++++++| |.++++++||+++..+++++.++|++|+++|+.+ +||...+. .|+|++||||.++++
T Consensus       333 ~i~d~~~~~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~-~g~~~~Ptvl~~v~~  409 (516)
T d1uzba_         333 GAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEG-EGYFIAPTVFTEVPP  409 (516)
T ss_dssp             HHHHHHHHHHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSS-SSCCBCCEEEESCCT
T ss_pred             ccccchhhHHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCC-CCceECCEEEecCCC
Confidence            99999999999999999999 5688899999999999999999999999888765 55555443 599999999999999


Q ss_pred             CCceeee----e---eeEecCcccccC
Q psy7043         148 EMDCYRF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       148 ~~~i~~e----p---v~~v~~~~~ai~  167 (167)
                      +|++++|    |   |+.+++++|||+
T Consensus       410 ~~~~~~eE~FGPvl~v~~~~d~eeai~  436 (516)
T d1uzba_         410 KARIAQEEIFGPVLSVIRVKDFAEALE  436 (516)
T ss_dssp             TSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred             CchhhcCCCcCceEEEEEeCCHHHHHH
Confidence            9999998    3   667777777763

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-37  Score=255.21  Aligned_cols=159  Identities=23%  Similarity=0.351  Sum_probs=143.2

Q ss_pred             CceEEeecChhhh-------ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHH
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEF   73 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f   73 (167)
                      ++++.||||+.+|       +++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|
T Consensus       179 ~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f  258 (446)
T d1ad3a_         179 FDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQI  258 (446)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHH
T ss_pred             cCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccchhHHH
Confidence            5789999999998       588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceee
Q psy7043          74 ISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYR  153 (167)
Q Consensus        74 ~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~  153 (167)
                      +++|.++++.+ +|++.++.+++||++++.+++++..+++.     ++...|+..+.  +++|++|||+.+++++|++++
T Consensus       259 ~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~~~--~~~~~~Ptil~~v~~~~~~~~  330 (446)
T d1ad3a_         259 VEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTWDQ--SSRYIAPTILVDVDPQSPVMQ  330 (446)
T ss_dssp             HHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCEET--TTTEECCEEECSCCTTSGGGT
T ss_pred             HHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhcccceeecC--CCCCcCCEEEECCCCCCHHHh
Confidence            99999999888 89999999999999999999999887764     34555554443  489999999999999999999


Q ss_pred             e-------eeeEecCcccccC
Q psy7043         154 F-------PCRLVDTIPTYIR  167 (167)
Q Consensus       154 e-------pv~~v~~~~~ai~  167 (167)
                      |       +|+.+++++|||+
T Consensus       331 eE~FgPVl~v~~~~~~~eai~  351 (446)
T d1ad3a_         331 EEIFGPVMPIVCVRSLEEAIQ  351 (446)
T ss_dssp             SCCCSSEECEEECSSHHHHHH
T ss_pred             CcccCcceEEEEeccHHHHHH
Confidence            8       3777888888873

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=1.7e-37  Score=258.41  Aligned_cols=164  Identities=25%  Similarity=0.404  Sum_probs=145.8

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      |+++.||||...|     ....+|+++|||||||+||++|||++.+++.+++++|.|+||.|++++|+|||++++++|++
T Consensus       234 i~~v~ftGs~~~g~~i~~~~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~  313 (499)
T d1ky8a_         234 VAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVE  313 (499)
T ss_dssp             CCEEEEESCHHHHHHHHHHHCSSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHH
T ss_pred             eeEEEeecccccceEEeecccccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHH
Confidence            5789999999998     45679999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEE---ecCCCCCcee
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLI---TDITPEMDCY  152 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl---~~~~~~~~i~  152 (167)
                      +|+++++++++|+|.+++++|||+++..+++++++++++|+.+|++++.|+.....   .+..++++   .++.+||+++
T Consensus       314 ~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~  390 (499)
T d1ky8a_         314 EVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP---TYVQPTLVEAPADRVKDMVLY  390 (499)
T ss_dssp             HHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEET---TEECCEEEECCHHHHTTSHHH
T ss_pred             HHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccc---cccccccccccccCCCCChhh
Confidence            99999999999999999999999999999999999999999999999999986532   33333333   4567899999


Q ss_pred             ee----e---eeEecCcccccC
Q psy7043         153 RF----P---CRLVDTIPTYIR  167 (167)
Q Consensus       153 ~e----p---v~~v~~~~~ai~  167 (167)
                      +|    |   |+.+++++|||+
T Consensus       391 ~eE~FGPvl~v~~~~~~~eai~  412 (499)
T d1ky8a_         391 KREVFAPVASAVEVKDLDQAIE  412 (499)
T ss_dssp             HSCCCSSEEEEEEESSHHHHHH
T ss_pred             hccccCceEEEEEcCCHHHHHH
Confidence            88    3   666677777763

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=99.98  E-value=3.2e-32  Score=224.90  Aligned_cols=162  Identities=23%  Similarity=0.335  Sum_probs=147.6

Q ss_pred             CceEEeecChhhh-----ccCCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHH
Q psy7043           1 MRLFGLKNSFPVT-----QKTQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFIS   75 (167)
Q Consensus         1 ~~~v~ftGs~~~g-----~~~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~   75 (167)
                      |+.|.||||+.+|     ....+|+++|+||+||+||++|||++.+++.+++++|.|+||.|++++++|||++++++|++
T Consensus       222 v~~v~ftGs~~~~~~i~~~a~~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~  301 (474)
T d1euha_         222 VNFINFTGSTGIGERIGKMAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVE  301 (474)
T ss_dssp             CCEEEEESCHHHHHHHHHHTTTSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHH
T ss_pred             ccEEEecCccccccchhhhcccceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhH
Confidence            6789999999998     35589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEecCCCCCceeee-
Q psy7043          76 KFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLITDITPEMDCYRF-  154 (167)
Q Consensus        76 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~e-  154 (167)
                      .++++...++.|++.+. ..++|+++..+.+++...+..+...++..+.++..    .|+|++|||+.+++++|++++| 
T Consensus       302 ~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~Ptvl~~~~~~~~~~~eE  376 (474)
T d1euha_         302 KIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR----EGNLICPILFDKVTTDMRLAWEE  376 (474)
T ss_dssp             HHHHHHHTSCBSCGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE----ETTEECCEEEESCCTTSGGGTSC
T ss_pred             hhhhhhhhccccCcccc-cccccccchHHHHHHHHHHHhhhcccccccccCCC----CCCCcCCEEEecCCCcchhhhcc
Confidence            99999999999988765 45799999999999999999999999887765543    4899999999999999999999 


Q ss_pred             ------eeeEecCcccccC
Q psy7043         155 ------PCRLVDTIPTYIR  167 (167)
Q Consensus       155 ------pv~~v~~~~~ai~  167 (167)
                            +|+.++++||||+
T Consensus       377 ~fgPvl~v~~~~~~deai~  395 (474)
T d1euha_         377 PFGPVLPIIRVTSVEEAIE  395 (474)
T ss_dssp             CCSSEEEEEEESCHHHHHH
T ss_pred             cCCcEEEEEEeCCHHHHHH
Confidence                  3778888888874

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=99.94  E-value=8.7e-28  Score=199.79  Aligned_cols=153  Identities=14%  Similarity=0.143  Sum_probs=118.4

Q ss_pred             CceEEeecChhhh-------ccCCCce--eEeCCCCCeeeEeCCCCHHHHH--HHHHHhhhhhcCCceecCcEEEEeccc
Q psy7043           1 MRLFGLKNSFPVT-------QKTQPRP--KVMPREASLNMVFESANIDLAI--QGALASKFRNCGQTCISANRFLIHEKR   69 (167)
Q Consensus         1 ~~~v~ftGs~~~g-------~~~~~~v--~lElgGknp~iV~~dad~~~aa--~~i~~~~~~~~GQ~C~a~~~v~v~~~i   69 (167)
                      |++|+||||+.+|       +++++|+  ++|||||||+||++|||++.++  +.+++++|.|+||.|++++|+||+++.
T Consensus       218 v~~V~FTGS~~~g~~i~~~aa~~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~  297 (504)
T d1ez0a_         218 IKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP  297 (504)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSH
T ss_pred             cceeeeccchHHHHHHHhhhhcccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhh
Confidence            6799999999998       4677665  5599999999999999999874  479999999999999999999998886


Q ss_pred             HH-HHHHHHHHHHHhhccCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCceEeeEEEe---cC
Q psy7043          70 YD-EFISKFSEKIKLLVVGDGAVSGVNVGPLINKAQLTKVTRIVDDAIKKGAKVLLGGKPNPTIGELYYEPTLIT---DI  145 (167)
Q Consensus        70 ~~-~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~---~~  145 (167)
                      +. .|++.+++.++..      ++.+.+||+++..+++++   ++.+..+|+.+..|+..     +.+..|+++.   ++
T Consensus       298 ~~~~~~~~~~~~~~~~------~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  363 (504)
T d1ez0a_         298 ETQAFIETAQSLIRQQ------SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE-----SPCVASALFVTSSEN  363 (504)
T ss_dssp             HHHHHHHHHHHHHHHC------CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC-----TTSBCCEEEEEEHHH
T ss_pred             hHHHHhhhhhhhhhhc------ccccccccchhhhhhhhh---hhhhhhhhhhccccccc-----ccccCCccccccccc
Confidence            54 5667776665532      456789999999888776   56677788888887764     3334444443   44


Q ss_pred             CCCCceeeee-------eeEecCcccccC
Q psy7043         146 TPEMDCYRFP-------CRLVDTIPTYIR  167 (167)
Q Consensus       146 ~~~~~i~~ep-------v~~v~~~~~ai~  167 (167)
                      ..++++++||       |+.+++++|||+
T Consensus       364 ~~~~~~~~eE~FGPvl~i~~~~~~~eai~  392 (504)
T d1ez0a_         364 WRKHPAWEEEIFGPQSLIVVCENVADMLS  392 (504)
T ss_dssp             HHHCGGGGSCCCSSEEEEEEESSHHHHHH
T ss_pred             cccchhhcccccCCeeeeeecCCHHHHHH
Confidence            4578899993       667777778763

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.64  E-value=2.9e-17  Score=132.65  Aligned_cols=85  Identities=21%  Similarity=0.194  Sum_probs=72.2

Q ss_pred             eEEeecChhhh-------ccCCCceeEeCCCCCe-eeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHH
Q psy7043           3 LFGLKNSFPVT-------QKTQPRPKVMPREASL-NMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFI   74 (167)
Q Consensus         3 ~v~ftGs~~~g-------~~~~~~v~lElgGknp-~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~   74 (167)
                      .+.||||+.++       +++.+++++|+||+|| +||++|||++.|++.++.++|.| ||.|++++|++||+++|++|+
T Consensus       193 ~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~  271 (414)
T d1o20a_         193 EYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFL  271 (414)
T ss_dssp             TTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHH
T ss_pred             ccCeEEEcccHHHHHHHhhhccccceecccCCCCCeecccccchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHH
Confidence            44555555554       5778999999998765 67889999999999999999877 999999999999999999999


Q ss_pred             HHHHHHHHhhccCC
Q psy7043          75 SKFSEKIKLLVVGD   88 (167)
Q Consensus        75 ~~l~~~~~~~~~g~   88 (167)
                      ++|.+...+..++.
T Consensus       272 ~~l~~~~~~~~~~~  285 (414)
T d1o20a_         272 PVIVEELRKHGVEV  285 (414)
T ss_dssp             HHHHHHHHHTTCEE
T ss_pred             HHHhHHHHHcCCcc
Confidence            99999998775543

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.36  E-value=3.7e-13  Score=109.13  Aligned_cols=81  Identities=15%  Similarity=0.026  Sum_probs=65.6

Q ss_pred             CceEEeecChhhh---cc-CCCceeEeCCCCCeeeEeCCCCHHHHHHHHHHhhhhhcCCceecCcEEEEecccHHHHHHH
Q psy7043           1 MRLFGLKNSFPVT---QK-TQPRPKVMPREASLNMVFESANIDLAIQGALASKFRNCGQTCISANRFLIHEKRYDEFISK   76 (167)
Q Consensus         1 ~~~v~ftGs~~~g---~~-~~~~v~lElgGknp~iV~~dad~~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~   76 (167)
                      |..|.||||....   .. ..+|+++++||++|++|++|||++.|++.++.++|.+.|| |.+.++++||+++++.|...
T Consensus       200 Id~ii~tGg~~lv~~v~~~~~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~  278 (436)
T d1vlua_         200 IDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVL  278 (436)
T ss_dssp             CCEEEEESCHHHHHHHHHTCCSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHH
T ss_pred             CceEEEecCCceeeeeeccccceEEEecCCccceeecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhh
Confidence            5689999999887   23 3349999999999999999999999999999999999997 88899999999998887655


Q ss_pred             HHHHHH
Q psy7043          77 FSEKIK   82 (167)
Q Consensus        77 l~~~~~   82 (167)
                      +....+
T Consensus       279 ~~~~~~  284 (436)
T d1vlua_         279 ENLTLE  284 (436)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            544433