Diaphorina citri psyllid: psy7141

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-----
MFQLRILSNCVLHQLNSNGKLFLPLITTASDLHTSQSCLKKSLAEIEVPRFTRHNNVVFPPQQEGEERRPAFVCHFKEKIKYSPDKMWYIACLIRGMSVDQALIQLGYVAKKGAPFIRDTILEAQEMAVKDHNVEFKSNLWVAESFVLKDIVIKGMRRHARVRMGRVEYKYCTYFVRLEEGKPPKNYYWTGPQTGPEKLEEYLQSLRYRKISSSL
ccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccccccccccccccEEEEEEEEcccccccccccccccHHHHHHHHHHHccccccccc
***LRILSNCVLHQLNSNGKLFLPLITTASDLHTSQSCLKKSLAEIEVPRFTRHNNVVF**********PAFVCHFKEKIKYSPDKMWYIACLIRGMSVDQALIQLGYVAKKGAPFIRDTILEAQEMAVKDHNVEFKSNLWVAESFVLKDIVIKGMRRHARVRMGRVEYKYCTYFVRLEEGKPPKNYYWTG**********YLQSLRYRK*****
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MFQLRILSNCVLHQLNSNGKLFLPLITTASDLHTSQSCLKKSLAEIEVPRFTRHNNVVFPPQQEGEERRPAFVCHFKEKIKYSPDKMWYIACLIRGMSVDQALIQLGYVAKKGAPFIRDTILEAQEMAVKDHNVEFKSNLWVAESFVLKDIVIKGMRRHARVRMGRVEYKYCTYFVRLEEGKPPKNYYWTGPQTGPEKLEEYLQSLRYRKISSSL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
39S ribosomal protein L22, mitochondrial very confidentQ9VXB5
39S ribosomal protein L22, mitochondrial confidentQ3SZX5
39S ribosomal protein L22, mitochondrial confidentP0C2C0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0003735 [MF]structural constituent of ribosomeprobableGO:0003674, GO:0005198
GO:0005762 [CC]mitochondrial large ribosomal subunitprobableGO:0015934, GO:0031974, GO:0043229, GO:0043228, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0005739, GO:0030529, GO:0005759, GO:0005761, GO:0000315, GO:0000313, GO:0044391, GO:0043231, GO:0032991, GO:0005840, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0006412 [BP]translationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FTC, chain M
Confidence level:very confident
Coverage over the Query: 75-184
View the alignment between query and template
View the model in PyMOL
Template: 3BBO, chain U
Confidence level:very confident
Coverage over the Query: 72-193
View the alignment between query and template
View the model in PyMOL