Diaphorina citri psyllid: psy7149


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
MDRGVNIVFDDASSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMNDGEELDSWSVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCDDCQFVCITQTDYYRIQHQ
cccccccEEccccccccccccccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHccHHcccccHHHHHHHHHHHEEEEEEccccEEEcccccccEEEEEEEEEEEEEEcccEEEEEccccCEEECcccccccEEEEEEEEcccCEEEEEcHHHHHHHHcc
*********DD***NLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMNDGEELDSWSVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCDDCQFVCITQTDYYRIQHQ
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MDRGVNIVFDDASSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMNDGEELDSWSVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCDDCQFVCITQTDYYRIQHQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Rap guanine nucleotide exchange factor 2 Guanine nucleotide exchange factor (GEF) for Rap1A, Rap1B and Rap2B GTPases. Does not interact with cAMP or cGMP.confidentQ9Y4G8
Rap guanine nucleotide exchange factor 2 Guanine nucleotide exchange factor (GEF) for Rap1, Rap1B and Rap2 GTPases.confidentQ8CHG7
Rap guanine nucleotide exchange factor 2 Guanine nucleotide exchange factor (GEF) for Rap1, Rap1B and Rap2 GTPases.confidentF1M386

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030742 [MF]GTP-dependent protein bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0007264 [BP]small GTPase mediated signal transductionprobableGO:0044700, GO:0051716, GO:0050896, GO:0009987, GO:0050794, GO:0008150, GO:0065007, GO:0044763, GO:0007165, GO:0023052, GO:0007154, GO:0035556, GO:0050789, GO:0044699
GO:0019901 [MF]protein kinase bindingprobableGO:0019900, GO:0003674, GO:0005515, GO:0019899, GO:0005488
GO:0017016 [MF]Ras GTPase bindingprobableGO:0019899, GO:0031267, GO:0051020, GO:0003674, GO:0005488, GO:0005515
GO:0048167 [BP]regulation of synaptic plasticityprobableGO:0065008, GO:0044057, GO:0031644, GO:0050804, GO:0065007, GO:0051239, GO:0023051, GO:0008150, GO:0051969, GO:0010646, GO:0050789, GO:0050794
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0046582 [MF]Rap GTPase activator activityprobableGO:0005099, GO:0030234, GO:0005096, GO:0030695, GO:0003674, GO:0008047, GO:0060589, GO:0005083
GO:0017034 [MF]Rap guanyl-nucleotide exchange factor activityprobableGO:0005088, GO:0005083, GO:0005085, GO:0030695, GO:0003674, GO:0060589, GO:0030234
GO:0005622 [CC]intracellularprobableGO:0005575, GO:0044464, GO:0005623
GO:0032854 [BP]positive regulation of Rap GTPase activityprobableGO:0009894, GO:0019220, GO:0080090, GO:0019222, GO:0046578, GO:0023051, GO:0010646, GO:0043087, GO:0050789, GO:0043085, GO:0032318, GO:0043547, GO:0051345, GO:0009966, GO:0031323, GO:0032317, GO:0030811, GO:0008150, GO:0065007, GO:0044093, GO:0065009, GO:0051056, GO:0033121, GO:0033124, GO:0019219, GO:0048583, GO:0050790, GO:0050794, GO:0051174, GO:0032487, GO:0051171, GO:0009118, GO:0051336, GO:1900542, GO:0032320, GO:0031329, GO:0006140

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1O7F, chain A
Confidence level:very confident
Coverage over the Query: 34-166
View the alignment between query and template
View the model in PyMOL