Diaphorina citri psyllid: psy7157

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------

MKDIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLPVGYLV

ccccccccccCECccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEECcccccccccc

**DIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHE**********YLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARV***********VPGNRGYKYFGAAKDLPVGYL*

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MKDIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRxxxxxxxxxxxxxxxxxxxxxIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLPVGYLV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Pre-mRNA-splicing factor ISY1 homolog	May play a role in pre-mRNA splicing.	confident	Q69ZQ2
Pre-mRNA-splicing factor ISY1 homolog	May play a role in pre-mRNA splicing.	confident	Q9ULR0
Pre-mRNA-splicing factor ISY1 homolog	May play a role in pre-mRNA splicing.	confident	Q6AYB3

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005730 [CC]	nucleolus	probable	GO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0071011 [CC]	precatalytic spliceosome	probable	GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0071013 [CC]	catalytic step 2 spliceosome	probable	GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0008380 [BP]	RNA splicing	probable	GO:0016070, GO:0006139, GO:0044260, GO:0044238, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0071704, GO:0010467, GO:0006807, GO:0008150, GO:1901360, GO:0008152, GO:0006396, GO:0046483
GO:0009507 [CC]	chloroplast	probable	GO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0006397 [BP]	mRNA processing	probable	GO:0016070, GO:0016071, GO:0044238, GO:0044260, GO:0006139, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0071704, GO:0010467, GO:0006807, GO:0008150, GO:1901360, GO:0008152, GO:0006396, GO:0046483

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1X4T, chain A
Confidence level:very confident
Coverage over the Query: 57-135
View the alignment between query and template
View the model in PyMOL

Template: 4GPS, chain A
Confidence level:probable
Coverage over the Query: 3-35,58-96
View the alignment between query and template
View the model in PyMOL