Psyllid ID: psy7157

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MKDIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLPVGYLV
Secondary Structure (PSIPRED)
ccccccccccEEEccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHcccccccccEEEEcHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccccccEcccccccEEcccccccccEEEc
Coil and Loop (DISEMBL)
mkdidadyygyrddddgvliplemkeekHRYCHARNAEKAMTTLARWRAAhehtdqvkdrrpylaseckslpAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKeldgpdyarvgprmldhdgkevpgnrgykyfgaakdlpvgylv
Flexible Loop (DISEMBL)
mkdidadyygyrddddgvLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHehtdqvkdrrpyLASECKSLPAAEKWRSQIIREISRKVAQIqnaglgefrirDLNDEINKLLREKShweaqikeldgpdyarvgprmldhdgkevpgnrgykyfgaakdlpvgylv
Low Complexity Region (SEG)
MKdidadyygyrddddGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLPVGYLV
Disordered region (IsUnstruct)
******DYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHE**********YLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARV**************NRGYKYFGAAKDLPVG***
Disordered Region (DISOPRED)
**DIDADYYGYRDDDDGVLIPLEMKE************KAMTTLARW******************SECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPD***************VPGNRGYKYFGAAKDLPVGYL*
Disordered Region (DISEMBL)
MKDIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLPVGYLV
Disordered Region (DISPRO)
*KDIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEHTD*VKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLPVGYLV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKDIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRxxxxxxxxxxxxxxxxxxxxxIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLPVGYLV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	167	2.2.26 [Sep-21-2011]
Q69ZQ2	285	Pre-mRNA-splicing factor	yes	N/A	0.772	0.452	0.806	3e-57
Q9ULR0	285	Pre-mRNA-splicing factor	yes	N/A	0.772	0.452	0.806	3e-57
Q6AYB3	284	Pre-mRNA-splicing factor	yes	N/A	0.772	0.454	0.806	3e-57
P0CO36	348	Pre-mRNA-splicing factor	yes	N/A	0.772	0.370	0.537	2e-34
P0CO37	348	Pre-mRNA-splicing factor	N/A	N/A	0.772	0.370	0.537	2e-34
Q54N41	299	Pre-mRNA-splicing factor	yes	N/A	0.760	0.424	0.511	1e-33
Q7SHY8	239	Pre-mRNA-splicing factor	N/A	N/A	0.772	0.539	0.529	2e-33
Q4PEZ0	351	Pre-mRNA-splicing factor	N/A	N/A	0.766	0.364	0.575	1e-31
Q51LS1	246	Pre-mRNA-splicing factor	N/A	N/A	0.772	0.524	0.518	2e-31
Q5B423	256	Pre-mRNA-splicing factor	yes	N/A	0.772	0.503	0.5	4e-31

>sp|Q69ZQ2|ISY1_MOUSE Pre-mRNA-splicing factor ISY1 homolog OS=Mus musculus GN=Isy1 PE=1 SV=2

 Score =  220 bits (561), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 113/129 (87%)

Query: 34  ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
           ARNAEKAMT LAR+R A     +VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQ
Sbjct: 2   ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 61

Query: 94  NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
           NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP+MLDH+GKEVPGNRGYK
Sbjct: 62  NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYK 121

Query: 154 YFGAAKDLP 162
           YFGAAKDLP
Sbjct: 122 YFGAAKDLP 130

May play a role in pre-mRNA splicing.
Mus musculus (taxid: 10090)

>sp|Q9ULR0|ISY1_HUMAN Pre-mRNA-splicing factor ISY1 homolog OS=Homo sapiens GN=ISY1 PE=1 SV=3

 Score =  220 bits (561), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 113/129 (87%)

Query: 34  ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
           ARNAEKAMT LAR+R A     +VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQ
Sbjct: 2   ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 61

Query: 94  NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
           NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP+MLDH+GKEVPGNRGYK
Sbjct: 62  NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYK 121

Query: 154 YFGAAKDLP 162
           YFGAAKDLP
Sbjct: 122 YFGAAKDLP 130

May play a role in pre-mRNA splicing.

Homo sapiens (taxid: 9606)

>sp|Q6AYB3|ISY1_RAT Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus GN=Isy1 PE=2 SV=1

 Score =  220 bits (561), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 113/129 (87%)

Query: 34  ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
           ARNAEKAMT LAR+R A     +VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQ
Sbjct: 2   ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 61

Query: 94  NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
           NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP+MLDH+GKEVPGNRGYK
Sbjct: 62  NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYK 121

Query: 154 YFGAAKDLP 162
           YFGAAKDLP
Sbjct: 122 YFGAAKDLP 130

May play a role in pre-mRNA splicing.

Rattus norvegicus (taxid: 10116)

>sp|P0CO36|ISY1_CRYNJ Pre-mRNA-splicing factor ISY1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ISY1 PE=3 SV=1

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/134 (53%), Positives = 91/134 (67%), Gaps = 5/134 (3%)

Query: 34  ARNAEKAMTTLARWRAAHE-----HTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRK 88
           ARN+EKA + L R+R          T Q  DRRP +AS C SL  AE+WR  I+R+ISRK
Sbjct: 2   ARNSEKAQSMLYRFREQQAIDMGIGTRQKGDRRPRMASSCTSLREAERWRGDILRDISRK 61

Query: 89  VAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPG 148
           V++IQ+  L ++++RDLNDEIN+L REK  WE QI  L G +Y R    M D +G+EVPG
Sbjct: 62  VSKIQDVALTDYQVRDLNDEINQLFREKRAWENQIINLGGANYRRAAGVMTDDEGREVPG 121

Query: 149 NRGYKYFGAAKDLP 162
            RGYKYFG AK+LP
Sbjct: 122 TRGYKYFGRAKELP 135

Involved in pre-mRNA splicing.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CO37|ISY1_CRYNB Pre-mRNA-splicing factor ISY1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ISY1 PE=3 SV=1

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/134 (53%), Positives = 91/134 (67%), Gaps = 5/134 (3%)

Query: 34  ARNAEKAMTTLARWRAAHE-----HTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRK 88
           ARN+EKA + L R+R          T Q  DRRP +AS C SL  AE+WR  I+R+ISRK
Sbjct: 2   ARNSEKAQSMLYRFREQQAIDMGIGTRQKGDRRPRMASSCTSLREAERWRGDILRDISRK 61

Query: 89  VAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPG 148
           V++IQ+  L ++++RDLNDEIN+L REK  WE QI  L G +Y R    M D +G+EVPG
Sbjct: 62  VSKIQDVALTDYQVRDLNDEINQLFREKRAWENQIINLGGANYRRAAGVMTDDEGREVPG 121

Query: 149 NRGYKYFGAAKDLP 162
            RGYKYFG AK+LP
Sbjct: 122 TRGYKYFGRAKELP 135

Involved in pre-mRNA splicing.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

>sp|Q54N41|ISY1_DICDI Pre-mRNA-splicing factor ISY1 homolog OS=Dictyostelium discoideum GN=isy1 PE=3 SV=1

 Score =  142 bits (357), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 66/129 (51%), Positives = 92/129 (71%)

Query: 34  ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
           ARN EKA + L R+        + ++RRPYL++EC SL  AEKWR QI++EI+R + +IQ
Sbjct: 2   ARNEEKAKSMLNRYLQLKGTESKQEERRPYLSNECDSLVDAEKWRRQILKEITRGITEIQ 61

Query: 94  NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
           N+ L E++IRDLND INKL+REK HWE +I +L GP++  + P++ D DGKE  G   Y+
Sbjct: 62  NSALDEYKIRDLNDHINKLVREKGHWERRILQLGGPNHRALAPKLFDADGKEPLGTGTYR 121

Query: 154 YFGAAKDLP 162
           Y+G AK+LP
Sbjct: 122 YYGEAKNLP 130

May play a role in pre-mRNA splicing.

Dictyostelium discoideum (taxid: 44689)

>sp|Q7SHY8|ISY1_NEUCR Pre-mRNA-splicing factor isy-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=isy-1 PE=3 SV=1

 Score =  141 bits (356), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 95/134 (70%), Gaps = 5/134 (3%)

Query: 34  ARNAEKAMTTLARWRAAHEH----TDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
           ARN+EKA + L R+R A        D  + RRP   +E  S+PA EKWR Q+++EISRKV
Sbjct: 2   ARNSEKAQSMLFRFREAQAADLGIIDAGRTRRPRSITEQDSIPACEKWRGQVLKEISRKV 61

Query: 90  AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVP-G 148
           ++IQ+  L +++IRDLNDEINKL+REK  WE QI+ L GP+Y R G ++ D  G+E+P G
Sbjct: 62  SRIQDPALSDYQIRDLNDEINKLMREKHMWEVQIRNLGGPNYMRSGGKVYDEAGREIPGG 121

Query: 149 NRGYKYFGAAKDLP 162
            RGYKYFG A++LP
Sbjct: 122 GRGYKYFGRARELP 135

Involved in pre-mRNA splicing.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q4PEZ0|ISY1_USTMA Pre-mRNA-splicing factor ISY1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ISY1 PE=3 SV=1

 Score =  135 bits (340), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 88/132 (66%), Gaps = 4/132 (3%)

Query: 34  ARNAEKAMTTLARWRAAHEHTDQVKD---RRPYLASECKSLPAAEKWRSQIIREISRKVA 90
           ARN EKA + L R+R A   +  V     RRP LAS   SL   E+WRS +IREISRKV+
Sbjct: 2   ARNQEKAQSMLYRFREAQATSLGVSTKPARRPRLASSVSSLKECERWRSDVIREISRKVS 61

Query: 91  QIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNR 150
           +IQ+ GL ++ +RDLNDEINKLLREK HWE QI  L G +Y R  P ML  D K V G  
Sbjct: 62  KIQDFGLNDYEVRDLNDEINKLLREKGHWENQIVALGGANYKRGVPSMLG-DDKGVVGRG 120

Query: 151 GYKYFGAAKDLP 162
           GYKYFG AKDLP
Sbjct: 121 GYKYFGRAKDLP 132

Involved in pre-mRNA splicing.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

>sp|Q51LS1|ISY1_MAGO7 Pre-mRNA-splicing factor ISY1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ISY1 PE=3 SV=1

 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 94/135 (69%), Gaps = 6/135 (4%)

Query: 34  ARNAEKAMTTLARWRAAHEH----TDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
           ARN+EKA + L R+R A        D  + RRP   +E  S+PA EKWR Q++++ISRKV
Sbjct: 2   ARNSEKAQSMLFRFREAQAADLGIIDAGRTRRPRAITEQDSIPACEKWRGQVLKDISRKV 61

Query: 90  AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARV-GPRMLDHDGKEVPG 148
           ++IQ + L +++IRDLNDEINKL+REK  WE QI+ L GP+Y R  G ++ D  GKE+ G
Sbjct: 62  SRIQESSLSDYQIRDLNDEINKLMREKHMWEVQIRNLGGPNYTRAGGAKVYDEAGKEIGG 121

Query: 149 -NRGYKYFGAAKDLP 162
             RGY+YFG AK+LP
Sbjct: 122 AGRGYRYFGRAKELP 136

Involved in pre-mRNA splicing.

Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507)

>sp|Q5B423|ISY1_EMENI Pre-mRNA-splicing factor isy1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=isy1 PE=3 SV=1

 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/134 (50%), Positives = 92/134 (68%), Gaps = 5/134 (3%)

Query: 34  ARNAEKAMTTLARWRAAHEH----TDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
           ARN+EKA + L R+RA         D  + RRP   +   S+PA EKWR Q+++EISRKV
Sbjct: 2   ARNSEKAQSMLFRFRAQQAADLGIIDIGRTRRPKAITSVDSIPACEKWRGQVLKEISRKV 61

Query: 90  AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVP-G 148
           ++IQ   L + +IRDLNDEINKL+REK  WE QI+ + GP+Y R   R+ D +G+E+P G
Sbjct: 62  SRIQEPSLSDHQIRDLNDEINKLMREKWAWEMQIRNMGGPNYMRGSGRVYDDEGREIPGG 121

Query: 149 NRGYKYFGAAKDLP 162
            +GY+YFG A++LP
Sbjct: 122 GKGYRYFGRARELP 135

Involved in pre-mRNA splicing.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
332373104	271	unknown [Dendroctonus ponderosae]	0.772	0.476	0.846	4e-58
322799897	232	hypothetical protein SINV_05964 [Solenop	0.772	0.556	0.832	5e-57
332017439	234	Pre-mRNA-splicing factor ISY1-like prote	0.772	0.551	0.832	9e-57
340714040	231	PREDICTED: pre-mRNA-splicing factor ISY1	0.772	0.558	0.824	1e-56
383863885	240	PREDICTED: pre-mRNA-splicing factor ISY1	0.772	0.537	0.824	1e-56
350427522	237	PREDICTED: pre-mRNA-splicing factor ISY1	0.772	0.544	0.824	1e-56
380026077	237	PREDICTED: pre-mRNA-splicing factor ISY1	0.772	0.544	0.824	2e-56
395516763	345	PREDICTED: pre-mRNA-splicing factor ISY1	0.862	0.417	0.753	3e-56
327265861	282	PREDICTED: pre-mRNA-splicing factor ISY1	0.772	0.457	0.821	3e-56
345495813	240	PREDICTED: pre-mRNA-splicing factor ISY1	0.772	0.537	0.824	3e-56

>gi|332373104|gb|AEE61693.1| unknown [Dendroctonus ponderosae]

 Score =  229 bits (583), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 110/130 (84%), Positives = 118/130 (90%), Gaps = 1/130 (0%)

Query: 34  ARNAEKAMTTLARWRAAH-EHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQI 92
           ARNAEKAMTTLARWRAA    T++VK RRPYLASECKSL A EKWR QIIRE+++KVAQI
Sbjct: 2   ARNAEKAMTTLARWRAAQASETEKVKKRRPYLASECKSLYACEKWRMQIIREVAKKVAQI 61

Query: 93  QNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGY 152
           QNAGLGEFRIRDLNDEINKLLREK HWE QIKEL GPDY +VGPRMLDH+GKEVPGNRGY
Sbjct: 62  QNAGLGEFRIRDLNDEINKLLREKRHWEDQIKELGGPDYQKVGPRMLDHEGKEVPGNRGY 121

Query: 153 KYFGAAKDLP 162
           KYFGAAK+LP
Sbjct: 122 KYFGAAKELP 131

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322799897|gb|EFZ21038.1| hypothetical protein SINV_05964 [Solenopsis invicta]

 Score =  225 bits (573), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 109/131 (83%), Positives = 120/131 (91%), Gaps = 2/131 (1%)

Query: 34  ARNAEKAMTTLARWRAA--HEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQ 91
           ARNAEKAMTTLARWRAA  +E T + ++RRPYLASEC+ L  AEKWR QIIREI++KVAQ
Sbjct: 1   ARNAEKAMTTLARWRAAQNNEGTRKEQERRPYLASECRDLRKAEKWRMQIIREIAKKVAQ 60

Query: 92  IQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRG 151
           IQNAGLGEFRIRDLNDEINKLLREK HWEAQIKEL GPDY+RVGPRMLDH+G+EVPGNRG
Sbjct: 61  IQNAGLGEFRIRDLNDEINKLLREKRHWEAQIKELGGPDYSRVGPRMLDHEGREVPGNRG 120

Query: 152 YKYFGAAKDLP 162
           YKYFGAAK+LP
Sbjct: 121 YKYFGAAKELP 131

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332017439|gb|EGI58162.1| Pre-mRNA-splicing factor ISY1-like protein [Acromyrmex echinatior]

 Score =  224 bits (571), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 109/131 (83%), Positives = 120/131 (91%), Gaps = 2/131 (1%)

Query: 34  ARNAEKAMTTLARWRAA--HEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQ 91
           ARNAEKAMTTLARWRAA  +E T + ++RRPYLASEC+ L  AEKWR QIIREI++KVAQ
Sbjct: 1   ARNAEKAMTTLARWRAAQNNEGTRKEQERRPYLASECRDLRKAEKWRMQIIREIAKKVAQ 60

Query: 92  IQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRG 151
           IQNAGLGEFRIRDLNDEINKLLREK HWEAQIKEL GPDY+RVGPRMLDH+G+EVPGNRG
Sbjct: 61  IQNAGLGEFRIRDLNDEINKLLREKRHWEAQIKELGGPDYSRVGPRMLDHEGREVPGNRG 120

Query: 152 YKYFGAAKDLP 162
           YKYFGAAK+LP
Sbjct: 121 YKYFGAAKELP 131

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714040|ref|XP_003395540.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Bombus terrestris]

 Score =  224 bits (570), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 108/131 (82%), Positives = 119/131 (90%), Gaps = 2/131 (1%)

Query: 34  ARNAEKAMTTLARWRAA--HEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQ 91
           ARNAEKAMTTLARWRAA  +E   + ++RRPYLASEC+ L  AEKWR QIIREI++KVAQ
Sbjct: 2   ARNAEKAMTTLARWRAAQSNEGARKEQERRPYLASECRDLRKAEKWRMQIIREIAKKVAQ 61

Query: 92  IQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRG 151
           IQNAGLGEFRIRDLNDEINKLLREK HWEAQIKEL GPDY+RVGPRMLDH+G+EVPGNRG
Sbjct: 62  IQNAGLGEFRIRDLNDEINKLLREKRHWEAQIKELGGPDYSRVGPRMLDHEGREVPGNRG 121

Query: 152 YKYFGAAKDLP 162
           YKYFGAAK+LP
Sbjct: 122 YKYFGAAKELP 132

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863885|ref|XP_003707410.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Megachile rotundata]

 Score =  223 bits (569), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 108/131 (82%), Positives = 119/131 (90%), Gaps = 2/131 (1%)

Query: 34  ARNAEKAMTTLARWRAA--HEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQ 91
           ARNAEKAMTTLARWRAA  +E   + ++RRPYLASEC+ L  AEKWR QIIREI++KVAQ
Sbjct: 4   ARNAEKAMTTLARWRAAQSNEGARKEQERRPYLASECRDLRKAEKWRMQIIREIAKKVAQ 63

Query: 92  IQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRG 151
           IQNAGLGEFRIRDLNDEINKLLREK HWEAQIKEL GPDY+RVGPRMLDH+G+EVPGNRG
Sbjct: 64  IQNAGLGEFRIRDLNDEINKLLREKRHWEAQIKELGGPDYSRVGPRMLDHEGREVPGNRG 123

Query: 152 YKYFGAAKDLP 162
           YKYFGAAK+LP
Sbjct: 124 YKYFGAAKELP 134

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350427522|ref|XP_003494788.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Bombus impatiens]

 Score =  223 bits (569), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 108/131 (82%), Positives = 119/131 (90%), Gaps = 2/131 (1%)

Query: 34  ARNAEKAMTTLARWRAA--HEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQ 91
           ARNAEKAMTTLARWRAA  +E   + ++RRPYLASEC+ L  AEKWR QIIREI++KVAQ
Sbjct: 2   ARNAEKAMTTLARWRAAQSNEGARKEQERRPYLASECRDLRKAEKWRMQIIREIAKKVAQ 61

Query: 92  IQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRG 151
           IQNAGLGEFRIRDLNDEINKLLREK HWEAQIKEL GPDY+RVGPRMLDH+G+EVPGNRG
Sbjct: 62  IQNAGLGEFRIRDLNDEINKLLREKRHWEAQIKELGGPDYSRVGPRMLDHEGREVPGNRG 121

Query: 152 YKYFGAAKDLP 162
           YKYFGAAK+LP
Sbjct: 122 YKYFGAAKELP 132

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380026077|ref|XP_003696788.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Apis florea]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/131 (82%), Positives = 119/131 (90%), Gaps = 2/131 (1%)

Query: 34  ARNAEKAMTTLARWRAA--HEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQ 91
           ARNAEKAMTTLARWRAA  +E   + ++RRPYLASEC+ L  AEKWR QIIREI++KVAQ
Sbjct: 2   ARNAEKAMTTLARWRAAQSNEGARKEQERRPYLASECRDLRKAEKWRMQIIREIAKKVAQ 61

Query: 92  IQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRG 151
           IQNAGLGEFRIRDLNDEINKLLREK HWEAQIKEL GPDY+RVGPRMLDH+G+EVPGNRG
Sbjct: 62  IQNAGLGEFRIRDLNDEINKLLREKRHWEAQIKELGGPDYSRVGPRMLDHEGREVPGNRG 121

Query: 152 YKYFGAAKDLP 162
           YKYFGAAK+LP
Sbjct: 122 YKYFGAAKELP 132

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|395516763|ref|XP_003762556.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Sarcophilus harrisii]

 Score =  223 bits (567), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 110/146 (75%), Positives = 120/146 (82%), Gaps = 2/146 (1%)

Query: 19  LIPLEMKEEKHRYCH--ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEK 76
           LIP E+ EE        ARNAEKAMT LAR+R A     +VK+RRP+LASEC  LP AEK
Sbjct: 48  LIPREVGEEPALEAEPWARNAEKAMTALARFRQAQLEEGKVKERRPFLASECNELPKAEK 107

Query: 77  WRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGP 136
           WR QII EIS+KVAQIQNAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP
Sbjct: 108 WRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGP 167

Query: 137 RMLDHDGKEVPGNRGYKYFGAAKDLP 162
           +MLDH+GKEVPGNRGYKYFGAAKDLP
Sbjct: 168 KMLDHEGKEVPGNRGYKYFGAAKDLP 193

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|327265861|ref|XP_003217726.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Anolis carolinensis]

 Score =  222 bits (566), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 106/129 (82%), Positives = 114/129 (88%)

Query: 34  ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
           ARNAEKAMT LAR+R A     +VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQ
Sbjct: 2   ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQ 61

Query: 94  NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
           NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDYARVGP+MLDH+GKEVPGNRGYK
Sbjct: 62  NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYARVGPKMLDHEGKEVPGNRGYK 121

Query: 154 YFGAAKDLP 162
           YFGAAKDLP
Sbjct: 122 YFGAAKDLP 130

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|345495813|ref|XP_001607041.2| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Nasonia vitripennis]

 Score =  222 bits (566), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 108/131 (82%), Positives = 117/131 (89%), Gaps = 2/131 (1%)

Query: 34  ARNAEKAMTTLARWRAAH--EHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQ 91
           ARNAEKAMTTLARWRAAH  +   + ++RRPYLASECK L  AEKWR QIIREI++KVAQ
Sbjct: 2   ARNAEKAMTTLARWRAAHCNDGIKKEQERRPYLASECKDLRKAEKWRMQIIREIAKKVAQ 61

Query: 92  IQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRG 151
           IQNAGLGEFRIRDLNDEINKLLREK HWE QIKEL GPDY+R GPRMLDH+G+EVPGNRG
Sbjct: 62  IQNAGLGEFRIRDLNDEINKLLREKRHWEVQIKELGGPDYSRTGPRMLDHEGREVPGNRG 121

Query: 152 YKYFGAAKDLP 162
           YKYFGAAKDLP
Sbjct: 122 YKYFGAAKDLP 132

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
UNIPROTKB|Q9ULR0	285	ISY1 "Pre-mRNA-splicing factor	0.772	0.452	0.806	3.8e-53
MGI|MGI:1923310	285	Isy1 "ISY1 splicing factor hom	0.772	0.452	0.806	3.8e-53
RGD|1307688	284	Isy1 "ISY1 splicing factor hom	0.772	0.454	0.806	3.8e-53
FB|FBgn0037550	272	CG9667 [Drosophila melanogaste	0.772	0.474	0.775	5.8e-50
WB|WBGene00009966	267	F53B7.3 [Caenorhabditis elegan	0.772	0.483	0.530	1.2e-33
TAIR|locus:2093964	300	AT3G18790 "AT3G18790" [Arabido	0.772	0.43	0.558	3.2e-33
DICTYBASE|DDB_G0285521	299	isy1 "ISY1-like protein" [Dict	0.772	0.431	0.511	1.8e-32
UNIPROTKB|Q51LS1	246	ISY1 "Pre-mRNA-splicing factor	0.772	0.524	0.518	1.3e-31
ASPGD|ASPL0000071699	256	AN4707 [Emericella nidulans (t	0.772	0.503	0.5	1.1e-30
GENEDB_PFALCIPARUM|PF14_0688	201	PF14_0688 "hypothetical protei	0.766	0.636	0.418	4.9e-21

UNIPROTKB|Q9ULR0 ISY1 "Pre-mRNA-splicing factor ISY1 homolog" [Homo sapiens (taxid:9606)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 104/129 (80%), Positives = 113/129 (87%)

Query:    34 ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
             ARNAEKAMT LAR+R A     +VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQ
Sbjct:     2 ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 61

Query:    94 NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
             NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP+MLDH+GKEVPGNRGYK
Sbjct:    62 NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYK 121

Query:   154 YFGAAKDLP 162
             YFGAAKDLP
Sbjct:   122 YFGAAKDLP 130

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

MGI|MGI:1923310 Isy1 "ISY1 splicing factor homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 104/129 (80%), Positives = 113/129 (87%)

Query:    34 ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
             ARNAEKAMT LAR+R A     +VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQ
Sbjct:     2 ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 61

Query:    94 NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
             NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP+MLDH+GKEVPGNRGYK
Sbjct:    62 NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYK 121

Query:   154 YFGAAKDLP 162
             YFGAAKDLP
Sbjct:   122 YFGAAKDLP 130

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008380 "RNA splicing" evidence=IEA

RGD|1307688 Isy1 "ISY1 splicing factor homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 104/129 (80%), Positives = 113/129 (87%)

Query:    34 ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
             ARNAEKAMT LAR+R A     +VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQ
Sbjct:     2 ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 61

Query:    94 NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
             NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP+MLDH+GKEVPGNRGYK
Sbjct:    62 NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYK 121

Query:   154 YFGAAKDLP 162
             YFGAAKDLP
Sbjct:   122 YFGAAKDLP 130

GO:0005634 "nucleus" evidence=ISO

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

FB|FBgn0037550 CG9667 [Drosophila melanogaster (taxid:7227)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 100/129 (77%), Positives = 108/129 (83%)

Query:    34 ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
             ARNAEKAMTTLARWRAA E     K+RRPYLASEC  LP  EK+R +IIR+IS+KVAQIQ
Sbjct:     2 ARNAEKAMTTLARWRAAKEVESGEKERRPYLASECHDLPRCEKFRLEIIRDISKKVAQIQ 61

Query:    94 NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
             NAGLGEFRIRDLNDEINKLLREK HWE QI  L GP Y R GP+M D +G+EVPGNRGYK
Sbjct:    62 NAGLGEFRIRDLNDEINKLLREKRHWENQISSLGGPHYRRYGPKMFDAEGREVPGNRGYK 121

Query:   154 YFGAAKDLP 162
             YFGAAKDLP
Sbjct:   122 YFGAAKDLP 130

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

WB|WBGene00009966 F53B7.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 69/130 (53%), Positives = 94/130 (72%)

Query:    34 ARNAEKAMTTLARWRAAHEHTDQVK-DRRPYLASECKSLPAAEKWRSQIIREISRKVAQI 92
             ARNAEKAMT LARWR   E  ++    RRP+   +C++L  AE++R +I+R+ S+K+  I
Sbjct:     2 ARNAEKAMTALARWRRMKEEEERGPIARRPHDVKDCRNLSDAERFRREIVRDASKKITAI 61

Query:    93 QNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGY 152
             QN GLGEF++RDLNDE+N+L++ K  WE +I+EL G DY +   + LD  G+E   +RGY
Sbjct:    62 QNPGLGEFKLRDLNDEVNRLIKLKHAWEQRIRELGGTDYRKYAQKELDAIGRETGNSRGY 121

Query:   153 KYFGAAKDLP 162
             KYFGAAKDLP
Sbjct:   122 KYFGAAKDLP 131

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0007281 "germ cell development" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0016477 "cell migration" evidence=IMP

TAIR|locus:2093964 AT3G18790 "AT3G18790" [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 76/136 (55%), Positives = 94/136 (69%)

Query:    34 ARNAEKAMTTLARWRAAHE-HTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQI 92
             ARN EKA + L R+    E    + K+RRPYLASEC+ L  A+KWR QI+REI  KVA+I
Sbjct:     2 ARNEEKAQSMLNRFITQKESEKKKPKERRPYLASECRDLAEADKWRQQILREIGSKVAEI 61

Query:    93 QNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEV----PG 148
             QN GLGE R+RDLNDEINKLLRE+ HWE +I EL G +Y++   +M D +G  +    P 
Sbjct:    62 QNEGLGEHRLRDLNDEINKLLRERYHWERRIVELGGHNYSKHSAKMTDLEGNIIDVPNPS 121

Query:   149 NRG--YKYFGAAKDLP 162
              RG  Y+YFGAAK LP
Sbjct:   122 GRGPGYRYFGAAKKLP 137

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

DICTYBASE|DDB_G0285521 isy1 "ISY1-like protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 66/129 (51%), Positives = 92/129 (71%)

Query:    34 ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
             ARN EKA + L R+        + ++RRPYL++EC SL  AEKWR QI++EI+R + +IQ
Sbjct:     2 ARNEEKAKSMLNRYLQLKGTESKQEERRPYLSNECDSLVDAEKWRRQILKEITRGITEIQ 61

Query:    94 NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
             N+ L E++IRDLND INKL+REK HWE +I +L GP++  + P++ D DGKE  G   Y+
Sbjct:    62 NSALDEYKIRDLNDHINKLVREKGHWERRILQLGGPNHRALAPKLFDADGKEPLGTGTYR 121

Query:   154 YFGAAKDLP 162
             Y+G AK+LP
Sbjct:   122 YYGEAKNLP 130

GO:0005681 "spliceosomal complex" evidence=IEA;ISS

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

GO:0008380 "RNA splicing" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q51LS1 ISY1 "Pre-mRNA-splicing factor ISY1" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 70/135 (51%), Positives = 94/135 (69%)

Query:    34 ARNAEKAMTTLARWRAAHEHT----DQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
             ARN+EKA + L R+R A        D  + RRP   +E  S+PA EKWR Q++++ISRKV
Sbjct:     2 ARNSEKAQSMLFRFREAQAADLGIIDAGRTRRPRAITEQDSIPACEKWRGQVLKDISRKV 61

Query:    90 AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVG-PRMLDHDGKEVPG 148
             ++IQ + L +++IRDLNDEINKL+REK  WE QI+ L GP+Y R G  ++ D  GKE+ G
Sbjct:    62 SRIQESSLSDYQIRDLNDEINKLMREKHMWEVQIRNLGGPNYTRAGGAKVYDEAGKEIGG 121

Query:   149 -NRGYKYFGAAKDLP 162
               RGY+YFG AK+LP
Sbjct:   122 AGRGYRYFGRAKELP 136

GO:0003674 "molecular_function" evidence=ND

ASPGD|ASPL0000071699 AN4707 [Emericella nidulans (taxid:162425)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 67/134 (50%), Positives = 92/134 (68%)

Query:    34 ARNAEKAMTTLARWRAAHEHT----DQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
             ARN+EKA + L R+RA         D  + RRP   +   S+PA EKWR Q+++EISRKV
Sbjct:     2 ARNSEKAQSMLFRFRAQQAADLGIIDIGRTRRPKAITSVDSIPACEKWRGQVLKEISRKV 61

Query:    90 AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGN 149
             ++IQ   L + +IRDLNDEINKL+REK  WE QI+ + GP+Y R   R+ D +G+E+PG 
Sbjct:    62 SRIQEPSLSDHQIRDLNDEINKLMREKWAWEMQIRNMGGPNYMRGSGRVYDDEGREIPGG 121

Query:   150 -RGYKYFGAAKDLP 162
              +GY+YFG A++LP
Sbjct:   122 GKGYRYFGRARELP 135

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GENEDB_PFALCIPARUM|PF14_0688 PF14_0688 "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 54/129 (41%), Positives = 82/129 (63%)

Query:    34 ARNAEKAMTTLARWRAAHEHTDQVKDRR-PYLASECKSLPAAEKWRSQIIREISRKVAQI 92
             ARN EK  + L +W  A E +D+ +  + P    E ++L  A K+R  II+E+ +K+ +I
Sbjct:     2 ARNVEKGKSMLNQWIKAKEISDKREFFKIPKNIDEVENLDDALKYRIYIIKEMCKKIKEI 61

Query:    93 QNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGY 152
             QN  L +  IR+LND+INKL+  K+ WEA+I EL G DY++    +++    E+ G+  Y
Sbjct:    62 QNHSLSDQHIRELNDQINKLIFIKNKWEARIVELGGRDYSKESNLLINAHSSELRGSSNY 121

Query:   153 KYFGAAKDL 161
             KYFGAAK+L
Sbjct:   122 KYFGAAKNL 130

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6AYB3	ISY1_RAT	No assigned EC number	0.8062	0.7724	0.4542	yes	N/A
Q9ULR0	ISY1_HUMAN	No assigned EC number	0.8062	0.7724	0.4526	yes	N/A
P0CO36	ISY1_CRYNJ	No assigned EC number	0.5373	0.7724	0.3706	yes	N/A
Q54N41	ISY1_DICDI	No assigned EC number	0.5116	0.7604	0.4247	yes	N/A
Q69ZQ2	ISY1_MOUSE	No assigned EC number	0.8062	0.7724	0.4526	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	167
pfam06246	253	pfam06246, Isy1, Isy1-like splicing family	1e-72
pfam06246	253	pfam06246, Isy1, Isy1-like splicing family	6e-07

>gnl|CDD|218954 pfam06246, Isy1, Isy1-like splicing family

 Score =  218 bits (558), Expect = 1e-72
 Identities = 82/133 (61%), Positives = 99/133 (74%), Gaps = 4/133 (3%)

Query: 34  ARNAEKAMTTLARWRAAHE----HTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
           ARN+EKA + L R+R A        D  + RRP L SE  SLP AEKWRSQII+EISRKV
Sbjct: 2   ARNSEKAQSMLNRFREAKAAEAGGLDSNRTRRPKLISEVTSLPEAEKWRSQIIKEISRKV 61

Query: 90  AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGN 149
            +IQ+  LGE++IRDLNDEINKL REK HWE +I+EL GPDY R+  ++ D +GKEVPG 
Sbjct: 62  TEIQDPSLGEYQIRDLNDEINKLFREKRHWEDRIRELGGPDYRRLSGKLNDAEGKEVPGG 121

Query: 150 RGYKYFGAAKDLP 162
           RGY+YFG AK+LP
Sbjct: 122 RGYRYFGRAKELP 134

Isy1 protein is important in the optimisation of splicing. Length = 253

>gnl|CDD|218954 pfam06246, Isy1, Isy1-like splicing family

 Score = 47.3 bits (113), Expect = 6e-07
 Identities = 18/28 (64%), Positives = 22/28 (78%)

Query: 1   MKDIDADYYGYRDDDDGVLIPLEMKEEK 28
            K IDADYYGYRD++DGVL+  E + EK
Sbjct: 159 YKRIDADYYGYRDEEDGVLLEYEAEREK 186

Isy1 protein is important in the optimisation of splicing. Length = 253

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
PF06246	255	Isy1: Isy1-like splicing family; InterPro: IPR0093	100.0
KOG3068|consensus	268		100.0
KOG3068|consensus	268		98.38
PF06246	255	Isy1: Isy1-like splicing family; InterPro: IPR0093	98.25

>PF06246 Isy1: Isy1-like splicing family; InterPro: IPR009360 Isy1 protein is important in the optimisation of splicing []

Probab=100.00  E-value=8.4e-64  Score=426.07  Aligned_cols=135  Identities=63%  Similarity=1.039  Sum_probs=63.9

Q ss_pred             hhccHHHHHHHHHHHHHHhhcccCC-C--CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhCCCCchhhhhchHHH
Q psy7157          33 HARNAEKAMTTLARWRAAHEHTDQV-K--DRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEI  109 (167)
Q Consensus        33 MaRN~EKA~s~L~rw~~~k~~~~~~-~--~~RP~~~~~v~~l~~ae~wR~~ii~EIs~ki~~Iqd~~L~E~~IRdLNDeI  109 (167)
                      ||||+|||||||+||+++|+++.+. .  .+||++|++|+||++|++||++|++|||+||++||||+||||+||||||+|
T Consensus         1 MARN~EKA~s~L~R~~~~k~~e~~~~~~~~~RP~~~s~v~~l~~ae~WR~~ii~EIs~kv~~Iqd~~L~E~~IRdLNDeI   80 (255)
T PF06246_consen    1 MARNEEKAQSMLNRWQEQKAEEEGGYKDGSRRPKNVSEVKSLPEAEKWRRQIIKEISRKVTRIQDPSLGEFQIRDLNDEI   80 (255)
T ss_dssp             -----------------------SS--------S-TTT---HHHHHHHHHHHHHHHHHHHHHHHH--S-HHHHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhhCCcccccCCCCChhhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence            9999999999999999999988862 2  299999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhHHHHHHhhCCCCCCCCCCccccCCCCcccCCCCceEEeecCCCCCcccC
Q psy7157         110 NKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLPVGYLV  167 (167)
Q Consensus       110 NkLirEK~~WE~rI~eLGG~dy~~~~~~~~d~~G~~v~g~~GyrYFG~Ak~LPgVk~~  167 (167)
                      |+||+||+|||+||++||||||.+.+++++|++|.+|||++|||||||||+|||||.|
T Consensus        81 NkL~rEK~~WE~rI~~LGG~dy~~~~~~~~d~~G~~~~~~~GyrYFGrAkeLPgVkeL  138 (255)
T PF06246_consen   81 NKLIREKRHWERRIKELGGPDYRRSGPKMLDSEGREVPGGRGYRYFGRAKELPGVKEL  138 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTS--STTT---------------------------------
T ss_pred             HHHHHHHHHHHHHHHHhCCCCccccccccccccCcccCCCCCceEeehhccCccHHHH
Confidence            9999999999999999999999999999999999999999999999999999999975

; PDB: 1X4T_A.

>KOG3068|consensus

Probab=100.00  E-value=2.6e-62  Score=413.18  Aligned_cols=135  Identities=71%  Similarity=1.133  Sum_probs=132.7

Q ss_pred             hhccHHHHHHHHHHHHHHhhccc-CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhCCCCchhhhhchHHHHH
Q psy7157          33 HARNAEKAMTTLARWRAAHEHTD-QVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINK  111 (167)
Q Consensus        33 MaRN~EKA~s~L~rw~~~k~~~~-~~~~~RP~~~~~v~~l~~ae~wR~~ii~EIs~ki~~Iqd~~L~E~~IRdLNDeINk  111 (167)
                      ||||+|||+|+|+||+++|.+++ +++++||+++|+|+||++|++||+||++|||+||++||||+||||+|||||||||+
T Consensus         1 MaRN~eka~t~LaRf~~~k~ee~~~pkerRP~~~sec~~l~~aekwRrqIvreIskKva~Iqn~gLgE~rirDLNDEiNk   80 (268)
T KOG3068|consen    1 MARNAEKAMTALARFREAKEEEGGKPKERRPYLASECKSLPEAEKWRRQIVREISKKVARIQNAGLGEFRIRDLNDEINK   80 (268)
T ss_pred             CCccHHHHHHHHHHHHHHHHHhccCccccCcccHHhhcccHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHH
Confidence            99999999999999999999988 49999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhHHHHHHhhCCCCCCCCCCccccCCCCcccCCCCceEEeecCCCCCcccC
Q psy7157         112 LLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLPVGYLV  167 (167)
Q Consensus       112 LirEK~~WE~rI~eLGG~dy~~~~~~~~d~~G~~v~g~~GyrYFG~Ak~LPgVk~~  167 (167)
                      ||+||+|||+||++||||+|.+.+++++|++|..||+++|||||||||+|||||.|
T Consensus        81 LlrEk~~WE~rI~elGG~~y~k~~~Kmld~eg~ev~~~rGyrYFGaAkdLPgVrEl  136 (268)
T KOG3068|consen   81 LLREKHHWEVRIRELGGPNYRKYKAKMLDDEGREVPNIRGYRYFGAAKDLPGVREL  136 (268)
T ss_pred             HHHHHHHHHHHHHHhcCcchhhhhhhhhhhhcccCCCCCcchhhhhhccCccHHHH
Confidence            99999999999999999999999999999999999999999999999999999975

>KOG3068|consensus

Probab=98.38  E-value=1.4e-07  Score=81.04  Aligned_cols=42  Identities=52%  Similarity=0.920  Sum_probs=36.9

Q ss_pred             CCCCCCCCcccccCCCCccchhhhhHHHHHHhhhccHHHHHHHHHHHHHHh
Q psy7157           1 MKDIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAH   51 (167)
Q Consensus         1 ~~~i~~~yyg~rd~~d~~l~~~e~~~e~~~~~MaRN~EKA~s~L~rw~~~k   51 (167)
                      |+.||+.||||+|++||+|++||+..|..    +|     +.++..|+-.|
T Consensus       154 ~k~iDa~yfgY~ddedg~L~~lE~~~E~~----~~-----~~~v~ew~~~k  195 (268)
T KOG3068|consen  154 MKRIDAEYFGYLDDEDGVLEPLEAKIESK----NR-----ERIVEEWRIEK  195 (268)
T ss_pred             HHhhhHHHcccccccchhhhHHHHHHHHH----HH-----HHHHHHHHHHH
Confidence            57899999999999999999999999988    66     78888898333

>PF06246 Isy1: Isy1-like splicing family; InterPro: IPR009360 Isy1 protein is important in the optimisation of splicing []

Probab=98.25  E-value=2e-07  Score=80.32  Aligned_cols=44  Identities=45%  Similarity=0.908  Sum_probs=0.0

Q ss_pred             CCCCCCCCcccccCCCCccchhhhhHHHHHHhhhccHHHHHHHHHHHHHHhhc
Q psy7157           1 MKDIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEH   53 (167)
Q Consensus         1 ~~~i~~~yyg~rd~~d~~l~~~e~~~e~~~~~MaRN~EKA~s~L~rw~~~k~~   53 (167)
                      +++||++||||+|++||+|++.|+++|+.    ++     +.++.+|...+..
T Consensus       159 ~k~i~~~YYG~~deed~~L~~~E~~~e~~----~~-----~~~~~~~~~~~~~  202 (255)
T PF06246_consen  159 YKDIDADYYGYRDEEDGELLEYEAEAEKE----LR-----EEAVEEWKEEEDE  202 (255)
T ss_dssp             -----------------------------------------------------
T ss_pred             hhcCCccccCCCCCcchhhhHHHHHHHHH----HH-----HHHHHHHHHHHhh
Confidence            57899999999999999999999999999    55     6778889877764

; PDB: 1X4T_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	167
1x4t_A	92	Solution Structure Of Isy1 Domain In Hypothetical P		2e-33

>pdb|1X4T|A Chain A, Solution Structure Of Isy1 Domain In Hypothetical Protein Length = 92

Iteration: 1
 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/89 (74%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Query: 49  AAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDE 108
            +   + +VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQNAGLGEFRIRDLNDE
Sbjct: 1   GSSGSSGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDE 60
Query: 109 INKLLREKSHWEAQIKELDGPDYARV-GP 136
           INKLLREK HWE +IKEL GPDY +V GP
Sbjct: 61  INKLLREKGHWEVRIKELGGPDYGKVSGP 89

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	167
1x4t_A	92	Hypothetical protein LOC57905; structural genomics	6e-39

>1x4t_A Hypothetical protein LOC57905; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.2.15.1 Length = 92

 Score =  126 bits (318), Expect = 6e-39
 Identities = 64/84 (76%), Positives = 70/84 (83%)

Query: 55  DQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLR 114
            +VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQNAGLGEFRIRDLNDEINKLLR
Sbjct: 7   GKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLR 66

Query: 115 EKSHWEAQIKELDGPDYARVGPRM 138
           EK HWE +IKEL GPDY +V    
Sbjct: 67  EKGHWEVRIKELGGPDYGKVSGPS 90

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	167
1x4t_A	92	Hypothetical protein LOC57905; structural genomics	100.0
4gps_A	423	KLLA0E02245P; decapping, 5'-3' exoribonuclease, HY	81.3

>1x4t_A Hypothetical protein LOC57905; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.2.15.1

Probab=100.00  E-value=2e-41  Score=249.74  Aligned_cols=79  Identities=81%  Similarity=1.299  Sum_probs=76.8

Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhCCCCchhhhhchHHHHHHHHhhhhHHHHHHhhCCCCCCCCC
Q psy7157          57 VKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVG  135 (167)
Q Consensus        57 ~~~~RP~~~~~v~~l~~ae~wR~~ii~EIs~ki~~Iqd~~L~E~~IRdLNDeINkLirEK~~WE~rI~eLGG~dy~~~~  135 (167)
                      ++.+||++|++|+||++||+||++||+|||+||++||||+||||+|||||||||+||+||+|||.||++||||||.+.+
T Consensus         9 ~~~~RP~~~~~v~~l~~AekWR~qvikEIs~Kv~~Iqn~~L~E~~IRdLNDEINkL~rEK~~WE~rI~eLGGpdY~~~~   87 (92)
T 1x4t_A            9 VKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVS   87 (92)
T ss_dssp             SCCCCCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSTTTS
T ss_pred             ccccCCCChhhcCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccC
Confidence            5789999999999999999999999999999999999999999999999999999999999999999999999998754

>4gps_A KLLA0E02245P; decapping, 5'-3' exoribonuclease, HYDR; HET: CIT; 2.40A {Kluyveromyces lactis} PDB: 4gpu_A

Probab=81.30  E-value=1.3  Score=39.87  Aligned_cols=72  Identities=11%  Similarity=0.170  Sum_probs=51.6

Q ss_pred             CCCCCCcccccCCCCccchhhhhHHHHHHhhhccHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCh--HHHHHHHHH
Q psy7157           3 DIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSL--PAAEKWRSQ   80 (167)
Q Consensus         3 ~i~~~yyg~rd~~d~~l~~~e~~~e~~~~~MaRN~EKA~s~L~rw~~~k~~~~~~~~~RP~~~~~v~~l--~~ae~wR~~   80 (167)
                      +|.--++||||+-+|+|..+|.---...-.|.+                      ....|-.++.|-+-  .-|-.|-+.
T Consensus       322 GVpkIIVGfRDd~~GiL~~Ie~~~T~EIP~~vk----------------------~~~~~W~~~~CiNF~a~i~~~wL~~  379 (423)
T 4gps_A          322 PKSDLLIGFRNSYSNELEQLKAYKIQDIYHKIN----------------------NSSIVGKPGKFYKFNPNVANDWFQH  379 (423)
T ss_dssp             SSCEEEEEEECTTTCBEEEEEEECHHHHHHHHC----------------------CTTGGGSCCSSGGGCHHHHHHHHHH
T ss_pred             CCCEEEEEEecCCCCEEEEEEEEEHHHHHHHHh----------------------cCCCCCCcchhhCcCHHHHHHHHHH
Confidence            566678999999999999998644333222222                      12346677888653  568999999


Q ss_pred             HHHHHHHHHHHHhhCC
Q psy7157          81 IIREISRKVAQIQNAG   96 (167)
Q Consensus        81 ii~EIs~ki~~Iqd~~   96 (167)
                      |++.|.+.+....+++
T Consensus       380 ii~~I~~~~~~~~~~~  395 (423)
T 4gps_A          380 IFQVLKQNLLLLSQES  395 (423)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHhhhhhccccCCC
Confidence            9999998887766654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	167
d1x4ta1	80	a.2.15.1 (A:7-86) Pre-mRNA-splicing factor ISY1 ho	5e-41

>d1x4ta1 a.2.15.1 (A:7-86) Pre-mRNA-splicing factor ISY1 homolog {Mouse (Mus musculus) [TaxId: 10090]} Length = 80

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: ISY1 domain-like
family: ISY1 N-terminal domain-like
domain: Pre-mRNA-splicing factor ISY1 homolog
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  130 bits (329), Expect = 5e-41
 Identities = 64/78 (82%), Positives = 69/78 (88%)

Query: 57  VKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREK 116
           VK+RRP+LASEC  LP AEKWR QII EIS+KVAQIQNAGLGEFRIRDLNDEINKLLREK
Sbjct: 3   VKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREK 62

Query: 117 SHWEAQIKELDGPDYARV 134
            HWE +IKEL GPDY +V
Sbjct: 63  GHWEVRIKELGGPDYGKV 80

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	167
d1x4ta1	80	Pre-mRNA-splicing factor ISY1 homolog {Mouse (Mus	100.0

>d1x4ta1 a.2.15.1 (A:7-86) Pre-mRNA-splicing factor ISY1 homolog {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: ISY1 domain-like
family: ISY1 N-terminal domain-like
domain: Pre-mRNA-splicing factor ISY1 homolog
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.2e-42  Score=244.81  Aligned_cols=78  Identities=81%  Similarity=1.305  Sum_probs=75.8

Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHhhCCCCchhhhhchHHHHHHHHhhhhHHHHHHhhCCCCCCC
Q psy7157          56 QVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYAR  133 (167)
Q Consensus        56 ~~~~~RP~~~~~v~~l~~ae~wR~~ii~EIs~ki~~Iqd~~L~E~~IRdLNDeINkLirEK~~WE~rI~eLGG~dy~~  133 (167)
                      +++.+||+++++|+||++||+||++|++|||+||++||||+||||+|||||||||+||+||++||.||++||||||.+
T Consensus         2 ~~~~rRP~~~~~v~~l~~aekwR~~iikEI~~kvs~Iqn~~L~e~~IRdLNDeINkL~reK~~WE~rI~eLGGpdY~r   79 (80)
T d1x4ta1           2 KVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGK   79 (80)
T ss_dssp             SSCCCCCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSTT
T ss_pred             CccccCCCCchhccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence            357899999999999999999999999999999999999999999999999999999999999999999999999986