Diaphorina citri psyllid: psy7220


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MLVTSLQTVDSHLETFPYDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR
cccccHHEEEEccCEEEccccccEEEEEEEEcccEEEEEEccccccHHHHHHHHHcccccccCEEEEEECcccccccHcc
****SLQTVDSHLETFPYDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSM****
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MLVTSLQTVDSHLETFPYDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Nod factor export ATP-binding protein I Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.confidentQ39GT7
Uncharacterized ABC transporter ATP-binding protein YbhF confidentP0A9U2
ABC transporter A family member 3 confidentQ1PEH6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0034188 [MF]apolipoprotein A-I receptor activityprobableGO:0038023, GO:0030226, GO:0060089, GO:0004888, GO:0003674, GO:0004872, GO:0004871
GO:0009605 [BP]response to external stimulusprobableGO:0050896, GO:0008150
GO:0032489 [BP]regulation of Cdc42 protein signal transductionprobableGO:0051056, GO:0009966, GO:0048583, GO:0023051, GO:0046578, GO:0050794, GO:0065007, GO:0035023, GO:0008150, GO:0010646, GO:0050789
GO:0030819 [BP]positive regulation of cAMP biosynthetic processprobableGO:0019220, GO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:0031323, GO:1900371, GO:0045981, GO:0080090, GO:0030816, GO:0030817, GO:0030814, GO:0009891, GO:0030810, GO:0050789, GO:0065007, GO:0048518, GO:0045935, GO:0045937, GO:0019219, GO:0009889, GO:0050794, GO:0051174, GO:0008150, GO:0051171, GO:0051173, GO:0030799, GO:0030808, GO:1900542, GO:1900544, GO:0030804, GO:0030801, GO:1900373, GO:0030802, GO:0006140, GO:0010562, GO:0048522
GO:0016324 [CC]apical plasma membraneprobableGO:0045177, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0034186 [MF]apolipoprotein A-I bindingprobableGO:0003674, GO:0034185, GO:0005515, GO:0005488
GO:0031424 [BP]keratinizationprobableGO:0032502, GO:0032501, GO:0044707, GO:0030216, GO:0009913, GO:0048869, GO:0060429, GO:0044763, GO:0009888, GO:0048513, GO:0008150, GO:0030855, GO:0030154, GO:0048731, GO:0009987, GO:0008544, GO:0007275, GO:0044699, GO:0048856
GO:0017127 [MF]cholesterol transporter activityprobableGO:0005319, GO:0005215, GO:0015248, GO:0022892, GO:0003674
GO:0055094 [BP]response to lipoprotein particle stimulusprobableGO:0009719, GO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0055091 [BP]phospholipid homeostasisprobableGO:0042592, GO:0050801, GO:0048878, GO:0055088, GO:0065007, GO:0008150, GO:0055081, GO:0065008
GO:0005764 [CC]lysosomeprobableGO:0005737, GO:0000323, GO:0043231, GO:0005773, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005768 [CC]endosomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0031267 [MF]small GTPase bindingprobableGO:0051020, GO:0003674, GO:0005515, GO:0019899, GO:0005488
GO:0060155 [BP]platelet dense granule organizationprobableGO:0006996, GO:0071840, GO:0009987, GO:0016050, GO:0044763, GO:0033363, GO:0008150, GO:0044699, GO:0016043
GO:0005548 [MF]phospholipid transporter activityprobableGO:0005319, GO:0005215, GO:0022892, GO:0003674
GO:0034364 [CC]high-density lipoprotein particleprobableGO:0032994, GO:0032991, GO:0034358, GO:0005575, GO:0005576, GO:0044421, GO:0005615
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0006200 [BP]ATP catabolic processprobableGO:0046434, GO:0009141, GO:0009143, GO:0009144, GO:0009146, GO:0009166, GO:0009164, GO:0006807, GO:0044237, GO:0072521, GO:0072523, GO:0046130, GO:0009259, GO:1901360, GO:1901361, GO:0046700, GO:0006139, GO:1901575, GO:0006195, GO:0042278, GO:0071704, GO:0009199, GO:0006152, GO:0046483, GO:0044281, GO:0009207, GO:0009205, GO:0009987, GO:0009203, GO:0044238, GO:0046034, GO:0009154, GO:0006725, GO:0044710, GO:0009150, GO:0009261, GO:0019637, GO:0009117, GO:0009116, GO:0008152, GO:0034655, GO:0009119, GO:0046128, GO:0009056, GO:0055086, GO:0042454, GO:0044248, GO:1901564, GO:0044270, GO:1901136, GO:1901135, GO:0034641, GO:0019693, GO:0006163, GO:1901657, GO:0006796, GO:1901292, GO:0006793, GO:0019439, GO:0008150, GO:0006753, GO:1901658, GO:1901565
GO:0007186 [BP]G-protein coupled receptor signaling pathwayprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0023052, GO:0065007, GO:0044763, GO:0007165, GO:0007166, GO:0007154, GO:0050789, GO:0044699
GO:0032367 [BP]intracellular cholesterol transportprobableGO:0033036, GO:0006810, GO:0015918, GO:0046907, GO:0015850, GO:0032366, GO:0032365, GO:0030301, GO:0006869, GO:0044765, GO:0044763, GO:0044699, GO:0071702, GO:0008150, GO:0009987, GO:0051234, GO:0010876, GO:0051179, GO:0051649, GO:0051641
GO:0034380 [BP]high-density lipoprotein particle assemblyprobableGO:0034377, GO:0071825, GO:0071827, GO:0022607, GO:0044707, GO:0043933, GO:0071840, GO:0016043, GO:0065003, GO:0032501, GO:0097006, GO:0008150, GO:0065005, GO:0065007, GO:0050789, GO:0044699, GO:0044085
GO:0007040 [BP]lysosome organizationprobableGO:0006996, GO:0007033, GO:0009987, GO:0016043, GO:0044763, GO:0071840, GO:0008150, GO:0044699
GO:0042493 [BP]response to drugprobableGO:0042221, GO:0050896, GO:0008150
GO:0097208 [CC]alveolar lamellar bodyprobableGO:0005737, GO:0005622, GO:0043231, GO:0016023, GO:0030141, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0005575, GO:0043229, GO:0031410, GO:0044424, GO:0042599, GO:0043227, GO:0043226, GO:0031982
GO:0005815 [CC]microtubule organizing centerprobableGO:0005856, GO:0005575, GO:0015630, GO:0043228, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043226, GO:0044422
GO:0005774 [CC]vacuolar membraneprobableGO:0005737, GO:0005575, GO:0031090, GO:0005773, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044437, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0043129 [BP]surfactant homeostasisprobableGO:0048875, GO:0032501, GO:0044707, GO:0048871, GO:0060249, GO:0048878, GO:0042592, GO:0065007, GO:0008150, GO:0001894, GO:0065008, GO:0044699
GO:0019905 [MF]syntaxin bindingprobableGO:0000149, GO:0003674, GO:0005488, GO:0005515
GO:0016197 [BP]endosomal transportprobableGO:0009987, GO:0046907, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0061436 [BP]establishment of skin barrierprobableGO:0032502, GO:0032501, GO:0065008, GO:0044707, GO:0050878, GO:0008150, GO:0033561, GO:0048856, GO:0050891, GO:0009888, GO:0042592, GO:0048513, GO:0065007, GO:0044699, GO:0048878, GO:0030104, GO:0048731, GO:0008544, GO:0007275, GO:0043588
GO:0033700 [BP]phospholipid effluxprobableGO:0006810, GO:0051234, GO:0006869, GO:0015914, GO:0071702, GO:0015711, GO:0051179, GO:0044765, GO:0006820, GO:0008150, GO:0015748, GO:0033036, GO:0010876, GO:0006811, GO:0044699
GO:0042157 [BP]lipoprotein metabolic processprobableGO:0044238, GO:0019538, GO:0043170, GO:0071704, GO:0008150, GO:0008152
GO:0042626 [MF]ATPase activity, coupled to transmembrane movement of substancesprobableGO:0016787, GO:0016818, GO:0016820, GO:0042623, GO:0005215, GO:0043492, GO:0016817, GO:0003824, GO:0017111, GO:0015399, GO:0022857, GO:0003674, GO:0016887, GO:0016462, GO:0015405, GO:0022804
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0035627 [BP]ceramide transportprobableGO:0051234, GO:0006869, GO:0006810, GO:0071705, GO:0044765, GO:0008150, GO:0071702, GO:0033036, GO:0010876, GO:0051179, GO:0044699
GO:0045335 [CC]phagocytic vesicleprobableGO:0005737, GO:0005575, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0030139, GO:0043229, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0031982
GO:0006950 [BP]response to stressprobableGO:0050896, GO:0008150
GO:0006357 [BP]regulation of transcription from RNA polymerase II promoterprobableGO:0009889, GO:0019219, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0006355, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0008509 [MF]anion transmembrane transporter activityprobableGO:0022891, GO:0022892, GO:0005215, GO:0015075, GO:0022857, GO:0003674
GO:0032374 [BP]regulation of cholesterol transportprobableGO:0032368, GO:0051049, GO:0032371, GO:0065007, GO:0008150, GO:0032879, GO:0050789
GO:0009986 [CC]cell surfaceprobableGO:0005575, GO:0044464, GO:0005623
GO:0005743 [CC]mitochondrial inner membraneprobableGO:0019866, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0031090, GO:0016020, GO:0005740, GO:0005739, GO:0031967, GO:0031966, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0071222 [BP]cellular response to lipopolysaccharideprobableGO:0070887, GO:0032496, GO:0044699, GO:0051716, GO:0033993, GO:0009617, GO:0071310, GO:0071219, GO:0071216, GO:0009987, GO:0071396, GO:0008150, GO:0042221, GO:0051707, GO:0010033, GO:0051704, GO:1901700, GO:1901701, GO:0009607, GO:0050896, GO:0002237, GO:0044763
GO:0009506 [CC]plasmodesmaprobableGO:0055044, GO:0005575, GO:0030054, GO:0005911
GO:0045121 [CC]membrane raftprobableGO:0005575, GO:0044425, GO:0016020
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0050702 [BP]interleukin-1 beta secretionprobableGO:0008104, GO:0032940, GO:0044699, GO:0050663, GO:0050701, GO:0009306, GO:0006810, GO:0071702, GO:0033036, GO:0032501, GO:0032612, GO:0032611, GO:0045184, GO:0044765, GO:0044763, GO:0051649, GO:0051234, GO:0051179, GO:0051641, GO:0046903, GO:0044707, GO:0001816, GO:0015031, GO:0008150, GO:0009987
GO:0042632 [BP]cholesterol homeostasisprobableGO:0042592, GO:0048878, GO:0055088, GO:0065007, GO:0008150, GO:0065008, GO:0055092
GO:0055085 [BP]transmembrane transportprobableGO:0006810, GO:0009987, GO:0044765, GO:0008150, GO:0044763, GO:0051234, GO:0051179, GO:0044699
GO:0008203 [BP]cholesterol metabolic processprobableGO:0044238, GO:0044710, GO:0016125, GO:0008202, GO:0006629, GO:0006066, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:1901360, GO:1901615
GO:0038027 [BP]apolipoprotein A-I-mediated signaling pathwayprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0023052, GO:0065007, GO:0044763, GO:0007165, GO:0007166, GO:0007154, GO:0050789, GO:0044699
GO:0048286 [BP]lung alveolus developmentprobableGO:0032502, GO:0060541, GO:0030323, GO:0030324, GO:0044707, GO:0032501, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0035295, GO:0007275, GO:0044699
GO:0005887 [CC]integral to plasma membraneprobableGO:0031226, GO:0016021, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459, GO:0031224
GO:0071300 [BP]cellular response to retinoic acidprobableGO:1901700, GO:1901701, GO:0032526, GO:0033993, GO:0050896, GO:0009987, GO:0071396, GO:0051716, GO:0008150, GO:0071310, GO:0044763, GO:0070887, GO:0042221, GO:0010033, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2IW3, chain A
Confidence level:very confident
Coverage over the Query: 9-69
View the alignment between query and template
View the model in PyMOL