Diaphorina citri psyllid: psy7343

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
MLVVVDFISSVLCYLSLHWVFGLVTSMELHRHSPVAHPPNPIPQECHSPAARCKGTNVVPKDCHSSTARSDAWTQLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRERFIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQQE
cEEEEHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccEEEccccccccHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHHcccccccccccHcccccccccccEEEccccccccHHHHHHHHHccccEEEcccccccHHHHcHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHcccccEEEccccccHHHHHcccccccccccHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHcccccEEEccccccHHHHHHHHHHHcccEEEEccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccc
MLVVVDFISSVLCYLSLHWVFGLVTSMEL****************************************SDAWTQLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRERFIDYHEGR************NHHNLSLPPWICQPYV*PT*****
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MLVVVDFISSVLCYLSLHWVFGLVTSMELHRHSPVAHPPNPIPQECHSPAARCKGTNVVPKDCHSSTARSDAWTQLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRERFIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQQE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.confidentQ6P1R4
tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.confidentQ8C2P3
tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.confidentQ8K582

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0017150 [MF]tRNA dihydrouridine synthase activityprobableGO:0003824, GO:0016627, GO:0003674, GO:0016491
GO:0008033 [BP]tRNA processingprobableGO:0016070, GO:0006139, GO:0044238, GO:0034470, GO:0044260, GO:0071704, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0006399, GO:0010467, GO:0006807, GO:0008150, GO:1901360, GO:0008152, GO:0034660, GO:0006396, GO:0046483
GO:0050660 [MF]flavin adenine dinucleotide bindingprobableGO:0043168, GO:0050662, GO:0097159, GO:0043167, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0000166, GO:1901363, GO:1901265

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1VHN, chain A
Confidence level:very confident
Coverage over the Query: 149-443
View the alignment between query and template
View the model in PyMOL
Template: 1VHN, chain A
Confidence level:very confident
Coverage over the Query: 79-309
View the alignment between query and template
View the model in PyMOL