Diaphorina citri psyllid: psy7417


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--
MKTDVAGGGDPEFVKRQEAKSSALDEQLKEYIVEWRNQRAKEEEDLKRLKEKQAKRKVMRAEEEQKMAQRKKEEEERRQREVEEKKQRDLEEKRQRLEEAEKKRQAMMAALKEQTNKSKGPNFTIQRREPGLTLSTAQLERNKTKEQIEEEKKIALNIRIKPLNVEGWSIHKLQAKATELWETIVKLETDKYDLEERQKRQDYDVSKIIINKKIMPSPGQGRPGFNPRYVQTPNLFNNATALTGKYPPKIQVASKYERRVDTRSYDDKKKLFEGGYLSLTKESLEKQYAEKVDQFGNRQKTKLPKWFGERPGKKKDAPESPEEEEVKRDDEEEENPIYLKISDDEEEKEEENFMSNNATAEDFHPLIVEQNF
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHccccccccHHHHHHHHHcccccHHHHHHHHccccccccHHHHHHHHHHcHHHHHHHccccccccccccccccccccccccHHHHHcccccccccccccccccHHHHHHHHHHcccccccccccccccccc
******************************YIVEW*********************************************************************************************************************KIALNIRIKPLNVEGWSIHKLQAKATELWETIVKLETDKYDLEERQK**DYDVSKIIINKKI*******************NLFNN**ALTGKYPPKIQVASKY*************KLFEGGYLSL*************************************************************************************PLIVE***
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MKTDVAGGGDPEFxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSKGPNFTIQRREPGLTxxxxxxxxxxxxxxxxxxxxxALNIRIKPLNVEGWSIHKLQAKATELWETIVKLETDKYDLEERQKRQDYDVSKIIINKKIMPSPGQGRPGFNPRYVQTPNLFNNATALTGKYPPKIQVASKYERRVDTRSYDDKKKLFEGGYLSLTKESLEKQYAEKVDQFGNRQKTKLPKWFGERPGKKKDAPESPEEEEVKRDDEEEENPIYLKISDDEEEKEEENFMSNNATAEDFHPLIVEQNF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Troponin T, skeletal muscle Troponin T is the tropomyosin-binding subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.confidentP19351
Troponin T Troponin T is the tropomyosin-binding subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.confidentQ9XZ71

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005865 [CC]striated muscle thin filamentprobableGO:0036379, GO:0044446, GO:0043228, GO:0015629, GO:0043232, GO:0005856, GO:0044464, GO:0044444, GO:0005623, GO:0005737, GO:0030016, GO:0030017, GO:0043229, GO:0044430, GO:0043292, GO:0005575, GO:0044424, GO:0005622, GO:0043226, GO:0044422, GO:0044449
GO:0005509 [MF]calcium ion bindingprobableGO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0007005 [BP]mitochondrion organizationprobableGO:0006996, GO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0008150, GO:0071840
GO:0007498 [BP]mesoderm developmentprobableGO:0032502, GO:0048856, GO:0008150, GO:0009888
GO:0006937 [BP]regulation of muscle contractionprobableGO:0044057, GO:0008150, GO:0090257, GO:0051239, GO:0065007, GO:0050789
GO:0046716 [BP]muscle cell homeostasisprobableGO:0019725, GO:0060249, GO:0009987, GO:0042592, GO:0065007, GO:0044763, GO:0008150, GO:0065008, GO:0044699
GO:0048644 [BP]muscle organ morphogenesisprobableGO:0032502, GO:0007517, GO:0032501, GO:0044707, GO:0048856, GO:0009887, GO:0044767, GO:0048513, GO:0008150, GO:0061061, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0006941 [BP]striated muscle contractionprobableGO:0032501, GO:0006936, GO:0044707, GO:0003012, GO:0008150, GO:0044699, GO:0003008
GO:0006874 [BP]cellular calcium ion homeostasisprobableGO:0019725, GO:0072507, GO:0072503, GO:0006875, GO:0050801, GO:0009987, GO:0006873, GO:0048878, GO:0042592, GO:0065007, GO:0044763, GO:0055074, GO:0030003, GO:0055065, GO:0055080, GO:0008150, GO:0055082, GO:0065008, GO:0044699
GO:0045214 [BP]sarcomere organizationprobableGO:0022607, GO:0031032, GO:0030154, GO:0048468, GO:0030036, GO:0010927, GO:0051146, GO:0061061, GO:0009653, GO:0044699, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048646, GO:0032502, GO:0055001, GO:0055002, GO:0030029, GO:0030239, GO:0009987, GO:0044767, GO:0044763, GO:0070925, GO:0006996, GO:0007010, GO:0048856, GO:0044085, GO:0008150, GO:0042692
GO:0030240 [BP]skeletal muscle thin filament assemblyprobableGO:0022607, GO:0031032, GO:0043933, GO:0030154, GO:0048468, GO:0030036, GO:0010927, GO:0051146, GO:0061061, GO:0009653, GO:0044699, GO:0071822, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048646, GO:0032502, GO:0055001, GO:0055002, GO:0014866, GO:0030029, GO:0030239, GO:0009987, GO:0044767, GO:0044763, GO:0070925, GO:0006996, GO:0007015, GO:0007010, GO:0048856, GO:0044085, GO:0008150, GO:0042692

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YTZ, chain T
Confidence level:very confident
Coverage over the Query: 122-221
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View the model in PyMOL
Template: 1J1E, chain C
Confidence level:confident
Coverage over the Query: 132-215,252-265
View the alignment between query and template
View the model in PyMOL
Template: 2Z5H, chain T
Confidence level:confident
Coverage over the Query: 12-49
View the alignment between query and template
View the model in PyMOL
Template: 1I84, chain S
Confidence level:probable
Coverage over the Query: 14-60
View the alignment between query and template
View the model in PyMOL