Psyllid ID: psy7447

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
Protein Sequence
MTLVPRFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQFSQDQ
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccEEccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccEEEcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccEEEcHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccccHcccccEEEccccccccccccccccccc
Coil and Loop (DISEMBL)
mtlvprfsefnlpphtlfnpllqfrytcdscgkvyKLKRSLYRHRtlecgkepryqcphcpyrgkqkvhLKTHVAIkhqgpemlsvkhqgpemlsikhqgpetlsiKHQFSQDQ
Flexible Loop (DISEMBL)
mtlvprfsefnlpphTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRtlecgkepryqcpHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQFSQDQ
Low Complexity Region (SEG)
MTLVPRFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQFSQDQ
Disordered region (IsUnstruct)
*******SEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIK*************************************
Disordered Region (DISOPRED)
****PR******************RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK***************************
Disordered Region (DISEMBL)
MTLVPRFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQFSQDQ
Disordered Region (DISPRO)
*TLVPRFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ***********************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTLVPRFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSIKHQFSQDQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	114	2.2.26 [Sep-21-2011]
Q7KQZ4	787	Longitudinals lacking pro	yes	N/A	0.473	0.068	0.537	1e-13
P42283	891	Longitudinals lacking pro	no	N/A	0.561	0.071	0.461	4e-11
Q9V5M3	878	Longitudinals lacking pro	no	N/A	0.359	0.046	0.560	6e-10
Q867Z4	970	Longitudinals lacking pro	no	N/A	0.535	0.062	0.460	2e-09
O62836	800	Zinc finger X-chromosomal	yes	N/A	0.631	0.09	0.341	4e-05
P17010	805	Zinc finger X-chromosomal	yes	N/A	0.631	0.089	0.341	4e-05
Q95LI3	801	Zinc finger Y-chromosomal	no	N/A	0.631	0.089	0.341	4e-05
P08048	801	Zinc finger Y-chromosomal	no	N/A	0.631	0.089	0.329	6e-05
Q6B4Z5	801	Zinc finger Y-chromosomal	no	N/A	0.631	0.089	0.329	6e-05
Q52V16	801	Zinc finger Y-chromosomal	N/A	N/A	0.631	0.089	0.329	6e-05

>sp|Q7KQZ4|LOLA3_DROME Longitudinals lacking protein, isoforms A/B/D/L OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 26  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 79
           + C  CG+VYKLK SL  H+  ECGKEP++QCP C YR KQK+H+  H+   H+
Sbjct: 685 HPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 738

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.
Drosophila melanogaster (taxid: 7227)

>sp|P42283|LOLA1_DROME Longitudinals lacking protein, isoform G OS=Drosophila melanogaster GN=lola PE=1 SV=2

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 26  YTCDSCGKVYKLKRSLYRHRTLECG-KEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEML 84
           Y C  CGK Y+ K +L RH  +ECG KEP +QCP+CPY+ KQ+ +L  HV   H     L
Sbjct: 791 YECRHCGKKYRWKSTLRRHENVECGGKEPSHQCPYCPYKSKQRGNLGVHVRKHHTDLPQL 850

Query: 85  SVKHQ 89
             K +
Sbjct: 851 PSKRR 855

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms N/O/W/X/Y OS=Drosophila melanogaster GN=lola PE=1 SV=3

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/41 (56%), Positives = 30/41 (73%)

Query: 25  RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGK 65
           +Y C+ CGK YK+K SL RH+  ECG EP  +CPHCP++ K
Sbjct: 708 KYACNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCK 748

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|Q867Z4|LOLA4_DROME Longitudinals lacking protein, isoforms F/I/K/T OS=Drosophila melanogaster GN=lola PE=1 SV=1

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)

Query: 25  RYTCDSCGKVYKLKRSLYRHRTLECG-KEPRYQCPHCPYRGKQKVHLKTHVAIKH-QGPE 82
           RY C  CGK Y+ K +L RH  +ECG KEP + CP+C Y+ KQ+ +L  HV   H + P+
Sbjct: 902 RYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVRKHHPEKPQ 961

Query: 83  MLS 85
           + S
Sbjct: 962 LES 964

Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.

Drosophila melanogaster (taxid: 7227)

>sp|O62836|ZFX_BOVIN Zinc finger X-chromosomal protein OS=Bos taurus GN=ZFX PE=2 SV=2

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 6   RFSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH 59
           +F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +
Sbjct: 517 KFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQY 575

Query: 60  CPYRGKQKVHLKTHVAIKH 78
           C YR     +LKTHV  KH
Sbjct: 576 CEYRSADSSNLKTHVKTKH 594

Probable transcriptional activator.

Bos taurus (taxid: 9913)

>sp|P17010|ZFX_HUMAN Zinc finger X-chromosomal protein OS=Homo sapiens GN=ZFX PE=2 SV=2

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 6   RFSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH 59
           +F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +
Sbjct: 522 KFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQY 580

Query: 60  CPYRGKQKVHLKTHVAIKH 78
           C YR     +LKTHV  KH
Sbjct: 581 CEYRSADSSNLKTHVKTKH 599

Probable transcriptional activator.

Homo sapiens (taxid: 9606)

>sp|Q95LI3|ZFY_BOVIN Zinc finger Y-chromosomal protein OS=Bos taurus GN=ZFY PE=2 SV=1

 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 6   RFSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH 59
           +F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +
Sbjct: 518 KFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQY 576

Query: 60  CPYRGKQKVHLKTHVAIKH 78
           C YR     +LKTHV  KH
Sbjct: 577 CEYRSADSSNLKTHVKTKH 595

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Bos taurus (taxid: 9913)

>sp|P08048|ZFY_HUMAN Zinc finger Y-chromosomal protein OS=Homo sapiens GN=ZFY PE=1 SV=3

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 6   RFSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH 59
           +F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +
Sbjct: 518 KFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELRKHMRIHTGEKP-YQCQY 576

Query: 60  CPYRGKQKVHLKTHVAIKH 78
           C YR     +LKTH+  KH
Sbjct: 577 CEYRSADSSNLKTHIKTKH 595

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Homo sapiens (taxid: 9606)

>sp|Q6B4Z5|ZFY_PANTR Zinc finger Y-chromosomal protein OS=Pan troglodytes GN=ZFY PE=2 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 6   RFSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH 59
           +F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +
Sbjct: 518 KFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQY 576

Query: 60  CPYRGKQKVHLKTHVAIKH 78
           C YR     +LKTH+  KH
Sbjct: 577 CEYRSADSSNLKTHIKTKH 595

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Pan troglodytes (taxid: 9598)

>sp|Q52V16|ZFY_GORGO Zinc finger Y-chromosomal protein OS=Gorilla gorilla gorilla GN=ZFY PE=3 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 6   RFSEFNLPPHTLFNPLL------QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH 59
           +F E+      L N  L       F + C  CGK ++    L +H  +  G++P YQC +
Sbjct: 518 KFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQY 576

Query: 60  CPYRGKQKVHLKTHVAIKH 78
           C YR     +LKTH+  KH
Sbjct: 577 CEYRSADSSNLKTHIKTKH 595

Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.

Gorilla gorilla gorilla (taxid: 9595)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
270003818	92	hypothetical protein TcasGA2_TC003099 [T	0.473	0.586	0.574	3e-12
157121098	731	lola [Aedes aegypti] gi|108874717|gb|EAT	0.473	0.073	0.537	4e-12
24652482	787	longitudinals lacking, isoform C [Drosop	0.473	0.068	0.537	6e-12
29539411	786	Lola protein isoform L [Drosophila melan	0.473	0.068	0.537	6e-12
158292853	634	AGAP005245-PG [Anopheles gambiae str. PE	0.666	0.119	0.407	2e-11
194884229	346	GG22734 [Drosophila erecta] gi|190659385	0.473	0.156	0.518	3e-11
255522809	444	longitudinals lacking isoform 8 [Triboli	0.552	0.141	0.444	3e-11
195425439	359	GK10676 [Drosophila willistoni] gi|19415	0.473	0.150	0.537	7e-11
45552567	771	longitudinals lacking, isoform W [Drosop	0.473	0.070	0.5	7e-11
312374696	238	hypothetical protein AND_15641 [Anophele	0.719	0.344	0.376	7e-11

>gi|270003818|gb|EFA00266.1| hypothetical protein TcasGA2_TC003099 [Tribolium castaneum]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 41/54 (75%)

Query: 26 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 79
          + CD+CG+ YK K SLY HR  ECGKEP+++C +CPY+GKQK+H   HV  KH+
Sbjct: 26 FVCDNCGRSYKRKSSLYNHRRWECGKEPQFKCSYCPYKGKQKIHFVMHVMAKHK 79

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157121098|ref|XP_001659824.1| lola [Aedes aegypti] gi|108874717|gb|EAT38942.1| AAEL009212-PC [Aedes aegypti]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 39/54 (72%)

Query: 26  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 79
           + C  CG+VYKLK SL  H+  ECGKEP++QCP+C YR KQK+H+  H+   H+
Sbjct: 650 FACPDCGRVYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHK 703

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24652482|ref|NP_724946.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|78711864|ref|NP_724949.2| longitudinals lacking, isoform B [Drosophila melanogaster] gi|73920870|sp|Q7KQZ4.1|LOLA3_DROME RecName: Full=Longitudinals lacking protein, isoforms A/B/D/L gi|7303724|gb|AAF58773.1| longitudinals lacking, isoform C [Drosophila melanogaster] gi|71911713|gb|AAF58776.3| longitudinals lacking, isoform B [Drosophila melanogaster]

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 26  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 79
           + C  CG+VYKLK SL  H+  ECGKEP++QCP C YR KQK+H+  H+   H+
Sbjct: 685 HPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 738

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|29539411|dbj|BAC67588.1| Lola protein isoform L [Drosophila melanogaster] gi|29539451|dbj|BAC67608.1| Lola protein isoform L [Drosophila melanogaster] gi|29539491|dbj|BAC67628.1| Lola protein isoform L [Drosophila melanogaster] gi|29539531|dbj|BAC67648.1| Lola protein isoform L [Drosophila melanogaster]

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 26  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 79
           + C  CG+VYKLK SL  H+  ECGKEP++QCP C YR KQK+H+  H+   H+
Sbjct: 684 HPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 737

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158292853|ref|XP_314150.4| AGAP005245-PG [Anopheles gambiae str. PEST] gi|157017188|gb|EAA09485.4| AGAP005245-PG [Anopheles gambiae str. PEST]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 5/81 (6%)

Query: 26  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS 85
           + C  CG+ YKLK SL  H+  ECGKEP++QCP+C YR KQK+H+  H+   H+      
Sbjct: 553 FACPDCGRTYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHKERYF-- 610

Query: 86  VKHQGPEMLSIKHQGPETLSI 106
            K +G +++++  + P TL++
Sbjct: 611 -KMEGDKVIAL--EDPTTLAL 628

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194884229|ref|XP_001976198.1| GG22734 [Drosophila erecta] gi|190659385|gb|EDV56598.1| GG22734 [Drosophila erecta]

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/54 (51%), Positives = 38/54 (70%)

Query: 26  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 79
           + C  CG++YKLK SL  H+  ECGKEP++QCP C YR KQK+H+  H+   H+
Sbjct: 244 HPCPVCGRIYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 297

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|255522809|ref|NP_001157317.1| longitudinals lacking isoform 8 [Tribolium castaneum]

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 44/63 (69%)

Query: 25  RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEML 84
           ++ C  CG+ YKL+ SL  H+  ECGK+P+++CPHCPY+ KQK+H++ H+   H+  +  
Sbjct: 370 KFACPQCGRYYKLRSSLRNHQKWECGKDPQFECPHCPYKAKQKMHVRRHIERMHKIIDYD 429

Query: 85  SVK 87
            VK
Sbjct: 430 DVK 432

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195425439|ref|XP_002061014.1| GK10676 [Drosophila willistoni] gi|194157099|gb|EDW72000.1| GK10676 [Drosophila willistoni]

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query: 26  YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 79
           + C  CG+VYKLK SL  H+  ECGKEP++QCP C YR KQK+H+  H+   H+
Sbjct: 254 HPCPVCGRVYKLKSSLRNHQKWECGKEPQFQCPFCVYRAKQKMHIGRHMERMHK 307

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|45552567|ref|NP_995806.1| longitudinals lacking, isoform W [Drosophila melanogaster] gi|29539421|dbj|BAC67593.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539461|dbj|BAC67613.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539501|dbj|BAC67633.1| Lola protein isoform Q [Drosophila melanogaster] gi|29539541|dbj|BAC67653.1| Lola protein isoform Q [Drosophila melanogaster] gi|45445597|gb|AAS64876.1| longitudinals lacking, isoform W [Drosophila melanogaster]

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/54 (50%), Positives = 37/54 (68%)

Query: 25  RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH 78
           +Y C+ CGK YK+K SL RH+  ECG EP  +CPHCP++ K +  L+ H+  KH
Sbjct: 708 KYACNVCGKTYKIKGSLKRHKNYECGVEPNLKCPHCPHKCKYRSDLRKHMNQKH 761

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374696|gb|EFR22194.1| hypothetical protein AND_15641 [Anopheles darlingi]

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 24  FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEM 83
           + ++C  CG+ YKLK SL  H+  ECGKEP++QCP+C YR KQK+H+  H+   H+    
Sbjct: 155 YGFSCQDCGRSYKLKSSLRNHQKWECGKEPQFQCPYCVYRAKQKMHIGRHMERMHKER-- 212

Query: 84  LSVKHQGPEMLSIKHQGPETLSIKH 108
              K +G ++++++      L + H
Sbjct: 213 -FFKMEGDKVIALEDPSSMALDLNH 236

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
FB|FBgn0005630	970	lola "longitudinals lacking" [	0.491	0.057	0.508	6.3e-10
ZFIN|ZDB-GENE-050208-626	256	si:dkey-15h8.15 "si:dkey-15h8.	0.464	0.207	0.472	1.3e-08
ZFIN|ZDB-GENE-060503-194	1084	znf516 "zinc finger protein 51	0.421	0.044	0.408	6.5e-08
UNIPROTKB|P80944	148	ZFX "Zinc finger X-chromosomal	0.473	0.364	0.4	8.7e-08
UNIPROTKB|Q29419	148	ZFY "Zinc finger Y-chromosomal	0.473	0.364	0.4	8.7e-08
ZFIN|ZDB-GENE-070424-49	459	zgc:162972 "zgc:162972" [Danio	0.552	0.137	0.4	1.7e-07
UNIPROTKB|O42424	179	ZNF6 "ZNF6 protein" [Gallus ga	0.473	0.301	0.381	2.3e-07
WB|WBGene00009937	318	lsl-1 [Caenorhabditis elegans	0.464	0.166	0.396	3.1e-07
ZFIN|ZDB-GENE-020806-1	639	plagl2 "pleiomorphic adenoma g	0.745	0.133	0.287	3.6e-07
RGD|1563179	472	Bcl6b "B-cell CLL/lymphoma 6,	0.622	0.150	0.315	3.7e-07

FB|FBgn0005630 lola "longitudinals lacking" [Drosophila melanogaster (taxid:7227)]

 Score = 155 (59.6 bits), Expect = 6.3e-10, P = 6.3e-10
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query:    25 RYTCDSCGKVYKLKRSLYRHRTLECG-KEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE 82
             RY C  CGK Y+ K +L RH  +ECG KEP + CP+C Y+ KQ+ +L  HV  KH  PE
Sbjct:   902 RYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYCSYKAKQRGNLGVHVR-KHH-PE 958

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0007411 "axon guidance" evidence=IGI;NAS;IMP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0007409 "axonogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=NAS

GO:0016199 "axon midline choice point recognition" evidence=IGI;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0019730 "antimicrobial humoral response" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0045467 "R7 cell development" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007464 "R3/R4 cell fate commitment" evidence=IMP

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0008406 "gonad development" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-050208-626 si:dkey-15h8.15 "si:dkey-15h8.15" [Danio rerio (taxid:7955)]

 Score = 133 (51.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 26/55 (47%), Positives = 32/55 (58%)

Query:    26 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG 80
             YTC  CGK Y LK +L RH  +  G+ P Y+C HC  R   + +LKTH  I H G
Sbjct:    62 YTCTQCGKSYNLKETLKRHLIIHTGERP-YKCSHCDMRFNNRGNLKTHKLI-HTG 114

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-060503-194 znf516 "zinc finger protein 516" [Danio rerio (taxid:7955)]

 Score = 118 (46.6 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
 Identities = 20/49 (40%), Positives = 30/49 (61%)

Query:    26 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHV 74
             +TC+ CG+ +    SL +H     G++P Y+CPHC +R  QK  LK H+
Sbjct:    30 HTCELCGRSFPFLSSLSQHMRKHTGEKP-YKCPHCEHRSAQKGSLKAHI 77

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|P80944 ZFX "Zinc finger X-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query:    24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH 78
             F + C  CGK ++    L +H  +  G++P YQC +C YR     +LKTHV  KH
Sbjct:    74 FPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYCEYRSADSSNLKTHVKTKH 127

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q29419 ZFY "Zinc finger Y-chromosomal protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 22/55 (40%), Positives = 31/55 (56%)

Query:    24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH 78
             F + C  CGK ++    L +H  +  G++P YQC +C YR     +LKTHV  KH
Sbjct:    74 FPHICVECGKGFRHPSELKKHMRIHTGEKP-YQCQYCEYRSADSSNLKTHVKTKH 127

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-070424-49 zgc:162972 "zgc:162972" [Danio rerio (taxid:7955)]

 Score = 128 (50.1 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 26/65 (40%), Positives = 36/65 (55%)

Query:    26 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS 85
             YTC  CGK + +K++L RH  +  G++P Y CP C    + K  LK HV I H G +  S
Sbjct:   199 YTCQECGKSFAIKQNLERHMRIHTGEKP-YSCPECGRSFRVKQDLKIHVRI-HTGEKPFS 256

Query:    86 VKHQG 90
              +  G
Sbjct:   257 CQQCG 261

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|O42424 ZNF6 "ZNF6 protein" [Gallus gallus (taxid:9031)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 21/55 (38%), Positives = 31/55 (56%)

Query:    24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH 78
             F + C  CGK ++    L +H     G++P YQC HC +R   + +LKTH+  KH
Sbjct:    97 FPHVCVECGKGFRHPSELKKHMRTHTGEKP-YQCQHCVFRCADQSNLKTHIKTKH 150

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

WB|WBGene00009937 lsl-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 123 (48.4 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 23/58 (39%), Positives = 34/58 (58%)

Query:    26 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC--PYR--GKQKVHLKTHVAIKHQ 79
             Y CD CG+ ++ K +++ HRT+  G  P Y CP C   +R  G  K H++THV  K +
Sbjct:    65 YICDVCGRGFRYKSNMFEHRTVHTGYTP-YVCPFCGKQFRLKGNMKKHMRTHVTSKEE 121

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

ZFIN|ZDB-GENE-020806-1 plagl2 "pleiomorphic adenoma gene-like 2" [Danio rerio (taxid:7955)]

 Score = 127 (49.8 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 25/87 (28%), Positives = 45/87 (51%)

Query:    25 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEML 84
             ++ CD C + +  ++ + RH  +  G++  + C +C  R  +K HL  HV   H   E+L
Sbjct:   255 KHPCDHCDRRFYTRKDVRRHMVVHTGRKD-FLCQYCAQRFGRKDHLTRHVKKSHS-QELL 312

Query:    85 SVKHQGPEMLSIKHQGPETLSIKHQFS 111
              +K + P+ML I   G    ++K + S
Sbjct:   313 KIKTEPPDMLGILGSGSPPCAVKEEIS 339

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IBA

GO:0006917 "induction of apoptosis" evidence=IBA

GO:0005634 "nucleus" evidence=IBA

RGD|1563179 Bcl6b "B-cell CLL/lymphoma 6, member B" [Rattus norvegicus (taxid:10116)]

 Score = 110 (43.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query:    26 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS 85
             Y C  C   ++ K +L  HRT+  G++P Y+C  C  R  +  +LKTH  I H G +   
Sbjct:   321 YKCQLCRSAFRYKGNLASHRTVHTGEKP-YRCSVCGARFNRPANLKTHSRI-HSGEKPYK 378

Query:    86 VKHQGPEMLSIKH 98
              +  G   + + H
Sbjct:   379 CETCGSRFVQVAH 391

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7KQZ4	LOLA3_DROME	No assigned EC number	0.5370	0.4736	0.0686	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	114
KOG2462|consensus	279		99.85
KOG2462|consensus	279		99.78
KOG3623|consensus	1007		99.58
KOG3623|consensus	1007		99.51
KOG1074|consensus	958		99.43
KOG3576|consensus	267		99.34
KOG3576|consensus	267		99.29
KOG3608|consensus	467		99.06
KOG1074|consensus	958		99.06
KOG3608|consensus	467		98.99
PHA02768	55	hypothetical protein; Provisional	98.93
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.86
PHA00733	128	hypothetical protein	98.86
PHA00733	128	hypothetical protein	98.84
PHA02768	55	hypothetical protein; Provisional	98.84
PLN03086	567	PRLI-interacting factor K; Provisional	98.68
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.58
PHA00616	44	hypothetical protein	98.54
PLN03086	567	PRLI-interacting factor K; Provisional	98.47
PHA00616	44	hypothetical protein	98.46
PHA00732	79	hypothetical protein	98.29
PHA00732	79	hypothetical protein	98.11
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.89
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.85
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.81
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.48
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.47
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.44
KOG3993|consensus	500		97.38
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.36
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.29
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.27
PRK04860	160	hypothetical protein; Provisional	97.26
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.2
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.06
smart00355	26	ZnF_C2H2 zinc finger.	96.84
smart00355	26	ZnF_C2H2 zinc finger.	96.82
PRK04860	160	hypothetical protein; Provisional	96.7
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.65
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.42
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.28
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.21
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.81
KOG3993|consensus	500		94.9
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.08
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.07
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.06
COG5048	467	FOG: Zn-finger [General function prediction only]	92.64
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.32
KOG1146|consensus	1406		91.28
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	90.0
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	89.11
PF05290	140	Baculo_IE-1: Baculovirus immediate-early protein (	88.43
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	88.28
COG1592	166	Rubrerythrin [Energy production and conversion]	88.09
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	87.81
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	87.78
KOG4317|consensus	383		86.68
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	85.62
KOG2186|consensus	276		85.35
KOG2893|consensus	341		84.32
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.91
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	82.43
COG1997	89	RPL43A Ribosomal protein L37AE/L43A [Translation,	82.24
KOG2186|consensus	276		82.12
COG4049	65	Uncharacterized protein containing archaeal-type C	81.59
PRK06266	178	transcription initiation factor E subunit alpha; V	81.0
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	80.88
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	80.72
smart00531	147	TFIIE Transcription initiation factor IIE.	80.12

>KOG2462|consensus

Probab=99.85  E-value=2.8e-22  Score=127.61  Aligned_cols=91  Identities=20%  Similarity=0.302  Sum_probs=79.8

Q ss_pred             cCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          10 FNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        10 ~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      -.|+.|+++ |+  -+..|.+||+.|..++-|+.|+++|+| +|||.|..|+++|...++|+.|+++|.+.|+ |.|..|
T Consensus       175 pALkMHirT-H~--l~c~C~iCGKaFSRPWLLQGHiRTHTG-EKPF~C~hC~kAFADRSNLRAHmQTHS~~K~-~qC~~C  249 (279)
T KOG2462|consen  175 PALKMHIRT-HT--LPCECGICGKAFSRPWLLQGHIRTHTG-EKPFSCPHCGKAFADRSNLRAHMQTHSDVKK-HQCPRC  249 (279)
T ss_pred             HHHhhHhhc-cC--CCcccccccccccchHHhhcccccccC-CCCccCCcccchhcchHHHHHHHHhhcCCcc-ccCcch
Confidence            356788888 75  688999999999999999999999999 9999999999999999999999999999998 999999


Q ss_pred             CcccccccccCCCccc
Q psy7447          90 GPEMLSIKHQGPETLS  105 (114)
Q Consensus        90 ~~~f~~~~~~~~~~~~  105 (114)
                      ++.|.-.+=...|..+
T Consensus       250 ~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  250 GKSFALKSYLNKHSES  265 (279)
T ss_pred             hhHHHHHHHHHHhhhh
Confidence            9999855444444433

>KOG2462|consensus

Probab=99.78  E-value=5.7e-20  Score=117.16  Aligned_cols=96  Identities=19%  Similarity=0.213  Sum_probs=82.8

Q ss_pred             ccCccCCCCccccCC---CCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447           6 RFSEFNLPPHTLFNP---LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h---~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      ..+.++|..|.-+ |   ...+.+.|.+|++.+..-..|..|+++|+.   +++|.+||+.|.+..-|+.|+|+||||||
T Consensus       140 ysT~snLsrHkQ~-H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l---~c~C~iCGKaFSRPWLLQGHiRTHTGEKP  215 (279)
T KOG2462|consen  140 YSTSSNLSRHKQT-HRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL---PCECGICGKAFSRPWLLQGHIRTHTGEKP  215 (279)
T ss_pred             cccccccchhhcc-cccccccccccCCCCCceeeehHHHhhHhhccCC---CcccccccccccchHHhhcccccccCCCC
Confidence            3456677777655 4   335778999999999999999999999954   78999999999999999999999999999


Q ss_pred             cccccCCCcccccccccCCCcccc
Q psy7447          83 MLSVKHQGPEMLSIKHQGPETLSI  106 (114)
Q Consensus        83 ~~~C~~C~~~f~~~~~~~~~~~~~  106 (114)
                       |.|..|++.|++.++..+|+..+
T Consensus       216 -F~C~hC~kAFADRSNLRAHmQTH  238 (279)
T KOG2462|consen  216 -FSCPHCGKAFADRSNLRAHMQTH  238 (279)
T ss_pred             -ccCCcccchhcchHHHHHHHHhh
Confidence             99999999999998877776654

>KOG3623|consensus

Probab=99.58  E-value=7.6e-16  Score=109.08  Aligned_cols=81  Identities=23%  Similarity=0.354  Sum_probs=73.3

Q ss_pred             CCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccC
Q psy7447          21 LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQG  100 (114)
Q Consensus        21 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~  100 (114)
                      +.+..|.|..|.+.|...++|.+|.-.|+| .+||+|.+|.++|..+.+|..|+|+|.|+|| |.|++|++.|.-...+.
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsG-qRPyqC~iCkKAFKHKHHLtEHkRLHSGEKP-fQCdKClKRFSHSGSYS  967 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSG-QRPYQCIICKKAFKHKHHLTEHKRLHSGEKP-FQCDKCLKRFSHSGSYS  967 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcC-CCCcccchhhHhhhhhhhhhhhhhhccCCCc-chhhhhhhhcccccchH
Confidence            456789999999999999999999999999 9999999999999999999999999999999 99999999998654444


Q ss_pred             CCc
Q psy7447         101 PET  103 (114)
Q Consensus       101 ~~~  103 (114)
                      .|+
T Consensus       968 QHM  970 (1007)
T KOG3623|consen  968 QHM  970 (1007)
T ss_pred             hhh
Confidence            443

>KOG3623|consensus

Probab=99.51  E-value=3.1e-15  Score=106.04  Aligned_cols=93  Identities=19%  Similarity=0.290  Sum_probs=79.0

Q ss_pred             CCCccccCC-CCCCceecCcchhhcCCchHHHHHHHHhcCC------------CCCeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          12 LPPHTLFNP-LLQFRYTCDSCGKVYKLKRSLYRHRTLECGK------------EPRYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        12 l~~h~~~~h-~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~------------~k~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      |+.|++..| ..+..|.|..|..+|.....|.+|+..|...            .+.|.|.+|+++|..+.+|..|+|+|.
T Consensus       226 lkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHS  305 (1007)
T KOG3623|consen  226 LKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHS  305 (1007)
T ss_pred             HHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeec
Confidence            466776655 3456789999999999999999999998532            467899999999999999999999999


Q ss_pred             CCCCcccccCCCcccccccccCCCccc
Q psy7447          79 QGPEMLSVKHQGPEMLSIKHQGPETLS  105 (114)
Q Consensus        79 ~~~p~~~C~~C~~~f~~~~~~~~~~~~  105 (114)
                      |+|| |.|+.|++.|.-...+..|+.+
T Consensus       306 GEKP-feCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  306 GEKP-FECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             CCCC-cCCcccccccccCCcccccccc
Confidence            9999 9999999999876556666654

>KOG1074|consensus

Probab=99.43  E-value=2.4e-14  Score=102.74  Aligned_cols=49  Identities=14%  Similarity=0.083  Sum_probs=26.2

Q ss_pred             eCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCccc
Q psy7447          56 QCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLS  105 (114)
Q Consensus        56 ~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~~~  105 (114)
                      +|.+|.+...-.++|+.|.|+|+||+| |+|.+||+.|..+-+...|+.-
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERP-FkCKiCgRAFtTkGNLkaH~~v  655 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERP-FKCKICGRAFTTKGNLKAHMSV  655 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCc-cccccccchhccccchhhcccc
Confidence            455555555555555555555555555 5555555555554444444433

>KOG3576|consensus

Probab=99.34  E-value=8.8e-14  Score=85.84  Aligned_cols=76  Identities=22%  Similarity=0.274  Sum_probs=64.7

Q ss_pred             CCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccc
Q psy7447          21 LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   98 (114)
Q Consensus        21 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~   98 (114)
                      +..-.+.|.+|++.|....-|.+|++-|.. .+.+.|..||+.|...-.|.+|.++|+|-+| |+|..|++.|+..-.
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~-vkr~lct~cgkgfndtfdlkrh~rthtgvrp-ykc~~c~kaftqrcs  188 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSD-VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRP-YKCSLCEKAFTQRCS  188 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccH-HHHHHHhhccCcccchhhhhhhhccccCccc-cchhhhhHHHHhhcc
Confidence            334567899999999888888899998888 8888999999999998899999999999888 999999998886543

>KOG3576|consensus

Probab=99.29  E-value=2.8e-13  Score=83.67  Aligned_cols=81  Identities=23%  Similarity=0.275  Sum_probs=72.1

Q ss_pred             CCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC-----------
Q psy7447          12 LPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG-----------   80 (114)
Q Consensus        12 l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~-----------   80 (114)
                      |..|++. |..-|.+.|.-||+.|.....|.+|+++|+| .+||.|..|+++|.+...|..|.+..+|.           
T Consensus       133 lnrh~kc-h~~vkr~lct~cgkgfndtfdlkrh~rthtg-vrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~  210 (267)
T KOG3576|consen  133 LNRHLKC-HSDVKRHLCTFCGKGFNDTFDLKRHTRTHTG-VRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRA  210 (267)
T ss_pred             HHHHhhh-ccHHHHHHHhhccCcccchhhhhhhhccccC-ccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhh
Confidence            4678888 9889999999999999999999999999999 99999999999999999999999887773           


Q ss_pred             CCcccccCCCccccc
Q psy7447          81 PEMLSVKHQGPEMLS   95 (114)
Q Consensus        81 ~p~~~C~~C~~~f~~   95 (114)
                      +- |.|..||..-..
T Consensus       211 kl-~vcedcg~t~~~  224 (267)
T KOG3576|consen  211 KL-YVCEDCGYTSER  224 (267)
T ss_pred             he-eeecccCCCCCC
Confidence            34 899999975443

>KOG3608|consensus

Probab=99.06  E-value=1.9e-11  Score=81.07  Aligned_cols=98  Identities=16%  Similarity=0.308  Sum_probs=71.4

Q ss_pred             cCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCC---------------------------CCCeeCCC
Q psy7447           7 FSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGK---------------------------EPRYQCPH   59 (114)
Q Consensus         7 ~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~---------------------------~k~~~C~~   59 (114)
                      -++..|+.|+++ |+++|...|..||..|.....|..|.+..+.-                           ..-|.|+.
T Consensus       190 ~~k~~LreH~r~-Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCpl  268 (467)
T KOG3608|consen  190 GNKYRLREHIRT-HSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPL  268 (467)
T ss_pred             ccHHHHHHHHHh-cCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccc
Confidence            456778889998 99988777777777776666666665543211                           34567888


Q ss_pred             CCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCccc
Q psy7447          60 CPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLS  105 (114)
Q Consensus        60 c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~~~  105 (114)
                      |.......+.|..|++.-+...+||+|+.|+..+........|...
T Consensus       269 Cdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~  314 (467)
T KOG3608|consen  269 CDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV  314 (467)
T ss_pred             cccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHh
Confidence            8888888999999999776655559999999998877765555443

>KOG1074|consensus

Probab=99.06  E-value=2.3e-11  Score=87.80  Aligned_cols=69  Identities=23%  Similarity=0.430  Sum_probs=45.1

Q ss_pred             ccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCC---CCCeeCC---CCCcccCCchHHHHHHHHhc
Q psy7447           9 EFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGK---EPRYQCP---HCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus         9 ~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~---~k~~~C~---~c~~~~~~~~~l~~h~~~~~   78 (114)
                      +++|+.|+++ |+|++||+|.+||+.|..+.+|+.|+..|...   ...+.|+   +|-+.|...-.+..|+++|.
T Consensus       618 ~saLqmHyrt-HtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQhIriH~  692 (958)
T KOG1074|consen  618 PSALQMHYRT-HTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQHIRIHL  692 (958)
T ss_pred             hhhhhhhhhc-ccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccceEEeec
Confidence            3556677777 77777777777777777777777776666541   1234566   66666776666777777665

>KOG3608|consensus

Probab=98.99  E-value=1.9e-10  Score=76.42  Aligned_cols=89  Identities=19%  Similarity=0.323  Sum_probs=76.9

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHHHHhc-CCCC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKH-QGPE   82 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~~-~~~p   82 (114)
                      +...++|..|++..|+..|||+|..|.+.+...+.|.+|...|+  +..|.|.-  |..++.+...+..|.+-++ |..|
T Consensus       273 c~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS--~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np  350 (467)
T KOG3608|consen  273 CSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS--KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNP  350 (467)
T ss_pred             CCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc--ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCC
Confidence            45678899999999999999999999999999999999999887  56789976  9999999999999988776 5443


Q ss_pred             -cccccCCCcccccc
Q psy7447          83 -MLSVKHQGPEMLSI   96 (114)
Q Consensus        83 -~~~C~~C~~~f~~~   96 (114)
                       +|.|-.|++-|.+=
T Consensus       351 ~~Y~CH~Cdr~ft~G  365 (467)
T KOG3608|consen  351 ILYACHCCDRFFTSG  365 (467)
T ss_pred             Cceeeecchhhhccc
Confidence             49999999988754

>PHA02768 hypothetical protein; Provisional

Probab=98.93  E-value=8.8e-10  Score=54.77  Aligned_cols=39  Identities=21%  Similarity=0.343  Sum_probs=31.0

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLS   95 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~   95 (114)
                      .|+|+.||+.|...++|..|+++|+  ++ +.|..|++.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~-~kc~~C~k~f~~   43 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TN-LKLSNCKRISLR   43 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Cc-ccCCcccceecc
Confidence            4678888888888888888888887  45 888888887763

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.86  E-value=1.7e-09  Score=46.15  Aligned_cols=25  Identities=12%  Similarity=0.163  Sum_probs=19.5

Q ss_pred             HHHHHHHHhcCCCCcccccCCCcccc
Q psy7447          69 HLKTHVAIKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        69 ~l~~h~~~~~~~~p~~~C~~C~~~f~   94 (114)
                      +|..|+++|+|++| |.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~~k~-~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP-YKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSS-EEESSSSEEES
T ss_pred             CHHHHhhhcCCCCC-CCCCCCcCeeC
Confidence            46778888888887 88888888775

...

>PHA00733 hypothetical protein

Probab=98.86  E-value=1.1e-09  Score=64.24  Aligned_cols=74  Identities=18%  Similarity=0.118  Sum_probs=54.7

Q ss_pred             CCCCceecCcchhhcCCchHHHHH--H---HHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccc
Q psy7447          21 LLQFRYTCDSCGKVYKLKRSLYRH--R---TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLS   95 (114)
Q Consensus        21 ~~~k~~~C~~C~~~f~~~~~l~~h--~---~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~   95 (114)
                      +.++++.|.+|...|..+..|..+  .   ..+.+ .++|.|..|++.|.....|..|++.+  +.+ |.|..|++.|..
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~-~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~-~~C~~CgK~F~~  111 (128)
T PHA00733         36 PEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKA-VSPYVCPLCLMPFSSSVSLKQHIRYT--EHS-KVCPVCGKEFRN  111 (128)
T ss_pred             hhhhhHHHHHHhhhccChhhhcchHHHHhhcccCC-CCCccCCCCCCcCCCHHHHHHHHhcC--CcC-ccCCCCCCccCC
Confidence            346788899988887766555444  1   12234 67899999999999999999998875  345 899999999886


Q ss_pred             ccc
Q psy7447          96 IKH   98 (114)
Q Consensus        96 ~~~   98 (114)
                      ...
T Consensus       112 ~~s  114 (128)
T PHA00733        112 TDS  114 (128)
T ss_pred             HHH
Confidence            544

>PHA00733 hypothetical protein

Probab=98.84  E-value=4.4e-09  Score=61.75  Aligned_cols=63  Identities=24%  Similarity=0.258  Sum_probs=52.5

Q ss_pred             CCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          12 LPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        12 l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      |..|+..  .+.+||.|..|++.|.....|..|++.+   ..++.|..|++.|.....|..|+...++
T Consensus        62 l~~~~~~--~~~kPy~C~~Cgk~Fss~s~L~~H~r~h---~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         62 LYKLLTS--KAVSPYVCPLCLMPFSSSVSLKQHIRYT---EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             HHhhccc--CCCCCccCCCCCCcCCCHHHHHHHHhcC---CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            3444333  3579999999999999999999999876   3468999999999999999999887765

>PHA02768 hypothetical protein; Provisional

Probab=98.84  E-value=1.8e-09  Score=53.68  Aligned_cols=42  Identities=19%  Similarity=0.461  Sum_probs=37.6

Q ss_pred             eecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHH
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHL   70 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l   70 (114)
                      |.|..||+.|...+.|..|++.|.   +++.|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~---k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN---TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC---CcccCCcccceeccccee
Confidence            689999999999999999999995   578899999999877655

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.68  E-value=1.3e-08  Score=72.24  Aligned_cols=66  Identities=18%  Similarity=0.318  Sum_probs=30.3

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCC----------chHHHHHHHHhcCCCCcccccCCCccc
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQ----------KVHLKTHVAIKHQGPEMLSVKHQGPEM   93 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~----------~~~l~~h~~~~~~~~p~~~C~~C~~~f   93 (114)
                      +++.|. |+..+ ....|..|+..|.. .+++.|..|+..+..          ...|..|.... |.++ +.|..||+.+
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp-~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt-~~C~~Cgk~V  551 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCP-LRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRT-APCDSCGRSV  551 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCC-CCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcc-eEccccCCee
Confidence            444554 55332 33445555555544 455555555544421          12444444442 4444 5555555444


Q ss_pred             c
Q psy7447          94 L   94 (114)
Q Consensus        94 ~   94 (114)
                      +
T Consensus       552 r  552 (567)
T PLN03086        552 M  552 (567)
T ss_pred             e
Confidence            4

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.58  E-value=6e-08  Score=41.32  Aligned_cols=25  Identities=36%  Similarity=0.639  Sum_probs=18.0

Q ss_pred             HHHHHHHHhcCCCCCeeCCCCCcccC
Q psy7447          40 SLYRHRTLECGKEPRYQCPHCPYRGK   65 (114)
Q Consensus        40 ~l~~h~~~h~~~~k~~~C~~c~~~~~   65 (114)
                      +|..|++.|++ ++||.|+.|++.|.
T Consensus         1 ~l~~H~~~H~~-~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTG-EKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSS-SSSEEESSSSEEES
T ss_pred             CHHHHhhhcCC-CCCCCCCCCcCeeC
Confidence            35677777777 77777777777664

...

>PHA00616 hypothetical protein

Probab=98.54  E-value=3.7e-08  Score=46.77  Aligned_cols=33  Identities=24%  Similarity=0.415  Sum_probs=19.8

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      ||+|..||+.|...+.+..|++.++|+++ +.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~-~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK-LTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc-ccee
Confidence            35566666666666666666666666655 5554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.47  E-value=3.1e-07  Score=65.37  Aligned_cols=67  Identities=18%  Similarity=0.354  Sum_probs=56.6

Q ss_pred             CCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccc
Q psy7447          21 LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        21 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~   94 (114)
                      ..++++.|..|++.|. ...+..|+..++   +++.|+ |+..+ ....|..|+..+.+.++ +.|.+|+..|.
T Consensus       449 el~~H~~C~~Cgk~f~-~s~LekH~~~~H---kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kp-i~C~fC~~~v~  515 (567)
T PLN03086        449 EAKNHVHCEKCGQAFQ-QGEMEKHMKVFH---EPLQCP-CGVVL-EKEQMVQHQASTCPLRL-ITCRFCGDMVQ  515 (567)
T ss_pred             ccccCccCCCCCCccc-hHHHHHHHHhcC---CCccCC-CCCCc-chhHHHhhhhccCCCCc-eeCCCCCCccc
Confidence            3456789999999996 577999999873   578999 99765 55889999999999988 99999999883

>PHA00616 hypothetical protein

Probab=98.46  E-value=1e-07  Score=45.27  Aligned_cols=33  Identities=18%  Similarity=0.449  Sum_probs=30.8

Q ss_pred             ceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      ||+|..||+.|...+.|..|++.|++ ++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg-~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK-QNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC-CCcccee
Confidence            68999999999999999999999999 8988875

>PHA00732 hypothetical protein

Probab=98.29  E-value=6.8e-07  Score=48.17  Aligned_cols=45  Identities=22%  Similarity=0.388  Sum_probs=30.0

Q ss_pred             ceecCcchhhcCCchHHHHHHHH-hcCCCCCeeCCCCCcccCCchHHHHHHHH
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRTL-ECGKEPRYQCPHCPYRGKQKVHLKTHVAI   76 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~k~~~C~~c~~~~~~~~~l~~h~~~   76 (114)
                      ||.|..|++.|.....|..|++. |.+    +.|+.|++.|.+   +..|...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~----~~C~~CgKsF~~---l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL----TKCPVCNKSYRR---LNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC----CccCCCCCEeCC---hhhhhcc
Confidence            46777787777777777777763 433    367777777763   5556543

>PHA00732 hypothetical protein

Probab=98.11  E-value=1.9e-06  Score=46.40  Aligned_cols=40  Identities=18%  Similarity=0.329  Sum_probs=33.8

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   96 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~   96 (114)
                      ||.|..|++.|.....|..|++.++.  + +.|+.||+.|..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~--~-~~C~~CgKsF~~l   40 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT--L-TKCPVCNKSYRRL   40 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC--C-CccCCCCCEeCCh
Confidence            57899999999999999999985332  3 7899999999865

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.89  E-value=9.6e-06  Score=33.21  Aligned_cols=22  Identities=41%  Similarity=0.798  Sum_probs=10.9

Q ss_pred             eecCcchhhcCCchHHHHHHHH
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTL   47 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~   47 (114)
                      |.|..|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.85  E-value=4.4e-05  Score=38.15  Aligned_cols=52  Identities=29%  Similarity=0.491  Sum_probs=37.1

Q ss_pred             ceecCcchhhcCCchHHHHHHH-HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRT-LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      .|.|+.|++. .....|..|.. .|....+.+.|++|...+.  .+|..|+...++
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            4789999994 44677888855 4554245789999987544  478888887654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.81  E-value=1.9e-05  Score=32.30  Aligned_cols=23  Identities=35%  Similarity=0.645  Sum_probs=20.9

Q ss_pred             eeCCCCCcccCCchHHHHHHHHh
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~~   77 (114)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67999999999999999999874

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.48  E-value=0.00013  Score=29.67  Aligned_cols=22  Identities=32%  Similarity=0.625  Sum_probs=9.7

Q ss_pred             eCCCCCcccCCchHHHHHHHHh
Q psy7447          56 QCPHCPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        56 ~C~~c~~~~~~~~~l~~h~~~~   77 (114)
                      .|+.|+..|.....|..|+..+
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHHhh
Confidence            4444555555555555554443

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.47  E-value=6.5e-05  Score=31.91  Aligned_cols=23  Identities=30%  Similarity=0.782  Sum_probs=12.1

Q ss_pred             eecCcchhhcCCchHHHHHHHHh
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~h   48 (114)
                      |.|..|++.|.....|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            45555555555555555555443

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.44  E-value=7.3e-05  Score=31.75  Aligned_cols=26  Identities=15%  Similarity=0.308  Sum_probs=22.6

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +++|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57899999999999999999987653

>KOG3993|consensus

Probab=97.38  E-value=9.3e-05  Score=50.97  Aligned_cols=56  Identities=21%  Similarity=0.501  Sum_probs=41.8

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCC-------C-------------------------CCeeCCCCCcccCCchHHH
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGK-------E-------------------------PRYQCPHCPYRGKQKVHLK   71 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~-------~-------------------------k~~~C~~c~~~~~~~~~l~   71 (114)
                      --|+|.+|+|.|+-..+|..|.+=|.-.       .                         -.|.|..|++.|.++..|+
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLr  373 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLR  373 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHH
Confidence            4578999999999999998888766211       1                         1367888888888888888


Q ss_pred             HHHHHhcC
Q psy7447          72 THVAIKHQ   79 (114)
Q Consensus        72 ~h~~~~~~   79 (114)
                      .|+-+|+.
T Consensus       374 KHqlthq~  381 (500)
T KOG3993|consen  374 KHQLTHQR  381 (500)
T ss_pred             HhHHhhhc
Confidence            88777754

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.36  E-value=0.00019  Score=29.22  Aligned_cols=23  Identities=30%  Similarity=0.728  Sum_probs=19.2

Q ss_pred             eecCcchhhcCCchHHHHHHHHh
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~h   48 (114)
                      |.|..|+..|.....|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999875

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.29  E-value=8.3e-05  Score=49.55  Aligned_cols=66  Identities=14%  Similarity=0.145  Sum_probs=36.5

Q ss_pred             CCceecCc--chhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccccc
Q psy7447          23 QFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   99 (114)
Q Consensus        23 ~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~   99 (114)
                      +|||.|++  |.+.++..-.|..|+..-.-..+..+-+       ..  . .+.-.....|| |.|.+|++.+-.+.|.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p-------~p--~-~~~~F~~~~KP-YrCevC~KRYKNlNGL  414 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP-------SP--E-KMNIFSAKDKP-YRCEVCDKRYKNLNGL  414 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC-------Cc--c-ccccccccCCc-eeccccchhhccCccc
Confidence            48899875  8888888888888866322101111111       00  0 00011223455 8888888887777663

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.27  E-value=0.00037  Score=33.99  Aligned_cols=31  Identities=29%  Similarity=0.488  Sum_probs=17.8

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      +.|..|++|+..+.+.-+|.+|+.+.++.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            5566777777777777777777777766655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=97.26  E-value=0.0003  Score=42.91  Aligned_cols=38  Identities=13%  Similarity=0.392  Sum_probs=31.7

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   96 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~   96 (114)
                      +|.|. |+.   ....+.+|.++++++++ |.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~-YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAV-YRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCcc-EECCCCCceeEEe
Confidence            58887 876   55667899999999998 9999999988754

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.20  E-value=0.00084  Score=32.77  Aligned_cols=44  Identities=20%  Similarity=0.215  Sum_probs=26.1

Q ss_pred             cCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCC
Q psy7447          10 FNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPR   54 (114)
Q Consensus        10 ~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~   54 (114)
                      .....+.+..+..+.|-.|.+|+..+....+|.+|+..+.+ .+|
T Consensus         9 ~~~~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~-~k~   52 (54)
T PF09237_consen    9 KPSTKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHF-KKP   52 (54)
T ss_dssp             SS-----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTT-TS-
T ss_pred             chhhhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhc-ccC
Confidence            33344555544556889999999999999999999988776 554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.06  E-value=0.00069  Score=37.56  Aligned_cols=25  Identities=28%  Similarity=0.655  Sum_probs=20.1

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      .+.|..|+..|.+...|..|++.+.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCcc
Confidence            5889999999999899999988654

>smart00355 ZnF_C2H2 zinc finger

Probab=96.84  E-value=0.0015  Score=26.81  Aligned_cols=20  Identities=40%  Similarity=0.675  Sum_probs=9.7

Q ss_pred             eCCCCCcccCCchHHHHHHH
Q psy7447          56 QCPHCPYRGKQKVHLKTHVA   75 (114)
Q Consensus        56 ~C~~c~~~~~~~~~l~~h~~   75 (114)
                      .|..|++.|.....+..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHH
Confidence            34445555555444544444

>smart00355 ZnF_C2H2 zinc finger

Probab=96.82  E-value=0.0012  Score=27.10  Aligned_cols=24  Identities=42%  Similarity=0.818  Sum_probs=21.2

Q ss_pred             eecCcchhhcCCchHHHHHHHHhc
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTLEC   49 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~h~   49 (114)
                      |.|..|++.|.....+..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998664

>PRK04860 hypothetical protein; Provisional

Probab=96.70  E-value=0.002  Score=39.40  Aligned_cols=39  Identities=31%  Similarity=0.644  Sum_probs=33.3

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCc
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQK   67 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~   67 (114)
                      -+|.|. |+.   ....+..|.+++.+ .++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g-~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRG-EAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcC-CccEECCCCCceeEEe
Confidence            479998 987   56778999999999 9999999999887654

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.65  E-value=0.0013  Score=44.12  Aligned_cols=25  Identities=32%  Similarity=0.568  Sum_probs=21.3

Q ss_pred             CCCeeCCC--CCcccCCchHHHHHHHH
Q psy7447          52 EPRYQCPH--CPYRGKQKVHLKTHVAI   76 (114)
Q Consensus        52 ~k~~~C~~--c~~~~~~~~~l~~h~~~   76 (114)
                      +|||.|++  |.+.+.+...|+.|+..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lh  373 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLH  373 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhc
Confidence            68999986  88999999999988653

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.42  E-value=0.0058  Score=30.39  Aligned_cols=39  Identities=15%  Similarity=0.308  Sum_probs=29.5

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCC-CcccccCCCccc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGP-EMLSVKHQGPEM   93 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~-p~~~C~~C~~~f   93 (114)
                      .|.|+.|++. .....|..|....+... ..+.|+.|...+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~   41 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRV   41 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhh
Confidence            4789999994 55678999988776543 349999998743

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.28  E-value=0.0029  Score=26.09  Aligned_cols=21  Identities=33%  Similarity=0.727  Sum_probs=11.8

Q ss_pred             eecCcchhhcCCchHHHHHHH
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      |.|..|+..|.....+..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.21  E-value=0.0053  Score=25.07  Aligned_cols=23  Identities=48%  Similarity=1.084  Sum_probs=11.9

Q ss_pred             eeCCCCCcccCCchHHHHHHHHhc
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      |.|..|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            34566665555 556666665544

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.81  E-value=0.0062  Score=25.04  Aligned_cols=23  Identities=22%  Similarity=0.428  Sum_probs=19.2

Q ss_pred             eeCCCCCcccCCchHHHHHHHHh
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~~   77 (114)
                      |.|.+|+..|.+...+..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57899999999999998887643

>KOG3993|consensus

Probab=94.90  E-value=0.0048  Score=42.89  Aligned_cols=52  Identities=25%  Similarity=0.461  Sum_probs=43.8

Q ss_pred             ceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHh
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~   77 (114)
                      -|.|..|...|.....|.+|.-...- ...|.|++|++.|+-..+|..|.|=|
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV-~vEYrCPEC~KVFsCPANLASHRRWH  318 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIV-HVEYRCPECDKVFSCPANLASHRRWH  318 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeE-EeeecCCcccccccCchhhhhhhccc
Confidence            37899999888888888888765555 56799999999999999999998755

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.08  E-value=0.013  Score=24.73  Aligned_cols=21  Identities=29%  Similarity=0.743  Sum_probs=12.7

Q ss_pred             eecCcchhhcCCchHHHHHHH
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      |.|..|++.|.....+..|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666655544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.07  E-value=0.056  Score=22.41  Aligned_cols=18  Identities=28%  Similarity=0.547  Sum_probs=8.0

Q ss_pred             eCCCCCcccCCchHHHHHH
Q psy7447          56 QCPHCPYRGKQKVHLKTHV   74 (114)
Q Consensus        56 ~C~~c~~~~~~~~~l~~h~   74 (114)
                      .|+.||+.| ....|..|.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~   21 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHE   21 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHH
Confidence            345555555 223344443

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.06  E-value=0.051  Score=24.11  Aligned_cols=24  Identities=25%  Similarity=0.466  Sum_probs=14.5

Q ss_pred             eeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCc
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGP   91 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~   91 (114)
                      |.|.+||..+....            .+ +.|+.||.
T Consensus         2 ~~C~~CGy~y~~~~------------~~-~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------AP-WVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CC-CcCcCCCC
Confidence            56777776554332            33 77777775

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.64  E-value=0.025  Score=38.87  Aligned_cols=63  Identities=21%  Similarity=0.337  Sum_probs=53.7

Q ss_pred             CceecCcchhhcCCchHHHHHHH--HhcCCC--CCeeCC--CCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRT--LECGKE--PRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~--~h~~~~--k~~~C~--~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      .++.|..|...|.....+..|.+  .|.+ +  +++.|+  .|++.|.+...+..|...+++..+ ..+..
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  356 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSG-ESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISP-AKEKL  356 (467)
T ss_pred             cCCCCccccCCcccccccccccccccccc-ccCCceeeeccCCCccccccccccCCcccccCCCc-ccccc
Confidence            46788999999999999999999  7888 7  899998  799999999999999999988776 55554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.32  E-value=0.12  Score=22.89  Aligned_cols=22  Identities=18%  Similarity=0.409  Sum_probs=12.8

Q ss_pred             ceecCcchhhcCCchHHHHHHH
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      +|.|..|+..|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4556666666665555555544

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=91.28  E-value=0.17  Score=40.25  Aligned_cols=64  Identities=25%  Similarity=0.450  Sum_probs=50.5

Q ss_pred             CCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHh-------------------------cCCCCCeeCCCCCcccC
Q psy7447          11 NLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLE-------------------------CGKEPRYQCPHCPYRGK   65 (114)
Q Consensus        11 ~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h-------------------------~~~~k~~~C~~c~~~~~   65 (114)
                      .+-.++...++..+.+.|..|+..++....|..||+.-                         .+ .++|.|..|..++.
T Consensus       451 ~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~-~~p~~C~~C~~stt  529 (1406)
T KOG1146|consen  451 SLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCP-GKPYPCRACNYSTT  529 (1406)
T ss_pred             ccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCC-CCcccceeeeeeee
Confidence            33456666678889999999999999999999999971                         11 57788888888888


Q ss_pred             CchHHHHHHH
Q psy7447          66 QKVHLKTHVA   75 (114)
Q Consensus        66 ~~~~l~~h~~   75 (114)
                      ...+|.+|+.
T Consensus       530 tng~Lsihlq  539 (1406)
T KOG1146|consen  530 TNGNLSIHLQ  539 (1406)
T ss_pred             cchHHHHHHH
Confidence            8788887765

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=90.00  E-value=0.28  Score=26.84  Aligned_cols=26  Identities=19%  Similarity=0.537  Sum_probs=22.2

Q ss_pred             ceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      .+.|..|++.|.....|..|++.+..
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~~H   75 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSKHH   75 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHTTT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCccC
Confidence            68999999999999999999997543

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=89.11  E-value=0.39  Score=21.84  Aligned_cols=10  Identities=10%  Similarity=0.149  Sum_probs=5.3

Q ss_pred             ccccCCCccc
Q psy7447          84 LSVKHQGPEM   93 (114)
Q Consensus        84 ~~C~~C~~~f   93 (114)
                      ..|..|+..|
T Consensus        26 vrC~~C~~~f   35 (37)
T PF13719_consen   26 VRCPKCGHVF   35 (37)
T ss_pred             EECCCCCcEe
Confidence            4555555544

>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0

Probab=88.43  E-value=0.9  Score=26.95  Aligned_cols=60  Identities=15%  Similarity=0.105  Sum_probs=33.6

Q ss_pred             CCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccc
Q psy7447          21 LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIK   97 (114)
Q Consensus        21 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~   97 (114)
                      ...+-|+|.+|..+......           -||-+|  ||...-..-  -.....+....|  .|+.|..+|.+.+
T Consensus        76 ~d~~lYeCnIC~etS~ee~F-----------LKPneC--CgY~iCn~C--ya~LWK~~~~yp--vCPvCkTSFKss~  135 (140)
T PF05290_consen   76 LDPKLYECNICKETSAEERF-----------LKPNEC--CGYSICNAC--YANLWKFCNLYP--VCPVCKTSFKSSS  135 (140)
T ss_pred             cCCCceeccCcccccchhhc-----------CCcccc--cchHHHHHH--HHHHHHHcccCC--CCCcccccccccc
Confidence            44588999999877553322           344444  554322211  112222333445  8999999998654

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=88.28  E-value=0.45  Score=21.21  Aligned_cols=8  Identities=13%  Similarity=-0.039  Sum_probs=4.5

Q ss_pred             ccccCCCc
Q psy7447          84 LSVKHQGP   91 (114)
Q Consensus        84 ~~C~~C~~   91 (114)
                      ..|+.||.
T Consensus        19 ~~CP~Cg~   26 (34)
T cd00729          19 EKCPICGA   26 (34)
T ss_pred             CcCcCCCC
Confidence            55666654

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=88.09  E-value=0.33  Score=29.94  Aligned_cols=26  Identities=19%  Similarity=0.370  Sum_probs=18.8

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGP   91 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~   91 (114)
                      ++.|.|.+||..             +.| .+|-.|+.||-
T Consensus       132 ~~~~vC~vCGy~-------------~~g-e~P~~CPiCga  157 (166)
T COG1592         132 GKVWVCPVCGYT-------------HEG-EAPEVCPICGA  157 (166)
T ss_pred             CCEEEcCCCCCc-------------ccC-CCCCcCCCCCC
Confidence            346999999863             345 44599999994

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=87.81  E-value=0.47  Score=27.15  Aligned_cols=13  Identities=23%  Similarity=0.488  Sum_probs=5.8

Q ss_pred             CeeCCCCCcccCC
Q psy7447          54 RYQCPHCPYRGKQ   66 (114)
Q Consensus        54 ~~~C~~c~~~~~~   66 (114)
                      |..|+.||..|..
T Consensus        26 PivCP~CG~~~~~   38 (108)
T PF09538_consen   26 PIVCPKCGTEFPP   38 (108)
T ss_pred             CccCCCCCCccCc
Confidence            4444444444443

The function of members of this family is unknown.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=87.78  E-value=0.076  Score=34.05  Aligned_cols=13  Identities=15%  Similarity=0.095  Sum_probs=10.5

Q ss_pred             ccccCCCcccccc
Q psy7447          84 LSVKHQGPEMLSI   96 (114)
Q Consensus        84 ~~C~~C~~~f~~~   96 (114)
                      +.|+.||.+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            6899999888744

>KOG4317|consensus

Probab=86.68  E-value=0.23  Score=33.60  Aligned_cols=30  Identities=17%  Similarity=0.102  Sum_probs=24.7

Q ss_pred             ccccCCCcccccccccCCCccccccccccC
Q psy7447          84 LSVKHQGPEMLSIKHQGPETLSIKHQFSQD  113 (114)
Q Consensus        84 ~~C~~C~~~f~~~~~~~~~~~~~~~~~~~~  113 (114)
                      |.|+.|+..+.+++.+..|..++.+.+=.|
T Consensus        20 YtCPRCn~~YCsl~CYr~h~~~CsE~Fyrd   49 (383)
T KOG4317|consen   20 YTCPRCNLLYCSLKCYRNHKHSCSEKFYRD   49 (383)
T ss_pred             ccCCCCCccceeeeeecCCCccchHHHHHH
Confidence            899999999999999888888887765443

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=85.62  E-value=1.2  Score=27.19  Aligned_cols=33  Identities=12%  Similarity=0.165  Sum_probs=26.3

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~   94 (114)
                      ..-|.|+.|+..|+...++.         .. |.|+.||....
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~~---------~~-F~Cp~Cg~~L~  139 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAME---------LN-FTCPRCGAMLD  139 (158)
T ss_pred             CCeEECCCCCcEeeHHHHHH---------cC-CcCCCCCCEee
Confidence            56789999999888887774         13 99999997644

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>KOG2186|consensus

Probab=85.35  E-value=0.61  Score=30.67  Aligned_cols=50  Identities=20%  Similarity=0.418  Sum_probs=34.0

Q ss_pred             eecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      |.|..||....-+ .+..|+..-.+  .-|.|..|+..|... ....|...-+-
T Consensus         4 FtCnvCgEsvKKp-~vekH~srCrn--~~fSCIDC~k~F~~~-sYknH~kCITE   53 (276)
T KOG2186|consen    4 FTCNVCGESVKKP-QVEKHMSRCRN--AYFSCIDCGKTFERV-SYKNHTKCITE   53 (276)
T ss_pred             Eehhhhhhhcccc-chHHHHHhccC--CeeEEeecccccccc-hhhhhhhhcch
Confidence            6789999887654 45667665443  458888999999884 44566554443

>KOG2893|consensus

Probab=84.32  E-value=0.27  Score=32.08  Aligned_cols=45  Identities=18%  Similarity=0.427  Sum_probs=32.5

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHH
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTH   73 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h   73 (114)
                      .|+| |=+|++.|.....|.+|++     .|.|.|-+|-+.+.+...|..|
T Consensus         9 ~kpw-cwycnrefddekiliqhqk-----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen    9 DKPW-CWYCNREFDDEKILIQHQK-----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             CCce-eeecccccchhhhhhhhhh-----hccceeeeehhhhccCCCceee
Confidence            4666 5688889988888888887     6678898888765554445444

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.91  E-value=1.1  Score=20.28  Aligned_cols=10  Identities=10%  Similarity=0.172  Sum_probs=4.8

Q ss_pred             ccccCCCccc
Q psy7447          84 LSVKHQGPEM   93 (114)
Q Consensus        84 ~~C~~C~~~f   93 (114)
                      ..|..|+..|
T Consensus        26 v~C~~C~~~f   35 (36)
T PF13717_consen   26 VRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEe
Confidence            4455554443

>TIGR00622 ssl1 transcription factor ssl1

Probab=82.43  E-value=4.3  Score=23.42  Aligned_cols=71  Identities=13%  Similarity=-0.016  Sum_probs=36.8

Q ss_pred             CceecCcchhhcCCchHHHHHHH---HhcCC-CCC-------eeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcc
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRT---LECGK-EPR-------YQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPE   92 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~---~h~~~-~k~-------~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~   92 (114)
                      -|..|..|+-+......|.+.--   ..... +.+       ..|-.|...|.......  ......... |.|+.|...
T Consensus        14 LP~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~--~~~~~~~~~-y~C~~C~~~   90 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSP--FDELKDSHR-YVCAVCKNV   90 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCccccc--ccccccccc-eeCCCCCCc
Confidence            46788889887776666654211   00000 111       13667777776532111  000111224 889999988


Q ss_pred             ccccc
Q psy7447          93 MLSIK   97 (114)
Q Consensus        93 f~~~~   97 (114)
                      |-..-
T Consensus        91 FC~dC   95 (112)
T TIGR00622        91 FCVDC   95 (112)
T ss_pred             ccccc
Confidence            87443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG1997 RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis]

Probab=82.24  E-value=0.38  Score=26.31  Aligned_cols=31  Identities=19%  Similarity=0.354  Sum_probs=20.9

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccc
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~   94 (114)
                      ..+.|+.|++.        ...+.-+|  - |.|..||..|+
T Consensus        34 ~~~~Cp~C~~~--------~VkR~a~G--I-W~C~kCg~~fA   64 (89)
T COG1997          34 AKHVCPFCGRT--------TVKRIATG--I-WKCRKCGAKFA   64 (89)
T ss_pred             cCCcCCCCCCc--------ceeeeccC--e-EEcCCCCCeec
Confidence            46789999863        12233333  3 89999999887

>KOG2186|consensus

Probab=82.12  E-value=0.79  Score=30.15  Aligned_cols=39  Identities=15%  Similarity=0.255  Sum_probs=31.2

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLS   95 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~   95 (114)
                      -|.|.+||....-+ .+.+|+-..++ .- |.|.-|+..|-.
T Consensus         3 ~FtCnvCgEsvKKp-~vekH~srCrn-~~-fSCIDC~k~F~~   41 (276)
T KOG2186|consen    3 FFTCNVCGESVKKP-QVEKHMSRCRN-AY-FSCIDCGKTFER   41 (276)
T ss_pred             EEehhhhhhhcccc-chHHHHHhccC-Ce-eEEeeccccccc
Confidence            36899999887764 46678887777 44 999999999986

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=81.59  E-value=1.1  Score=22.35  Aligned_cols=31  Identities=23%  Similarity=0.420  Sum_probs=22.3

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ..++.-+.|+.|+..|....++..|..-..+
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            4577778888888888877777777554333

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=81.00  E-value=2  Score=26.81  Aligned_cols=33  Identities=15%  Similarity=0.272  Sum_probs=25.2

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~   94 (114)
                      ..-|.|+.|+..|....++.         .. |.|+.||....
T Consensus       115 ~~~Y~Cp~C~~rytf~eA~~---------~~-F~Cp~Cg~~L~  147 (178)
T PRK06266        115 NMFFFCPNCHIRFTFDEAME---------YG-FRCPQCGEMLE  147 (178)
T ss_pred             CCEEECCCCCcEEeHHHHhh---------cC-CcCCCCCCCCe
Confidence            46789999998888876653         23 99999997655

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=80.88  E-value=1.3  Score=19.94  Aligned_cols=10  Identities=10%  Similarity=0.046  Sum_probs=4.9

Q ss_pred             ccccCCCccc
Q psy7447          84 LSVKHQGPEM   93 (114)
Q Consensus        84 ~~C~~C~~~f   93 (114)
                      ..|+.|+..|
T Consensus        26 v~C~~C~~~~   35 (38)
T TIGR02098        26 VRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEE
Confidence            4555555444

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=80.72  E-value=1.7  Score=20.63  Aligned_cols=11  Identities=18%  Similarity=0.386  Sum_probs=6.3

Q ss_pred             ccccCCCcccc
Q psy7447          84 LSVKHQGPEML   94 (114)
Q Consensus        84 ~~C~~C~~~f~   94 (114)
                      ..|+.||...+
T Consensus        20 irC~~CG~rIl   30 (44)
T smart00659       20 VRCRECGYRIL   30 (44)
T ss_pred             eECCCCCceEE
Confidence            56666665444

present in RNA polymerase I, II and III

>smart00531 TFIIE Transcription initiation factor IIE

Probab=80.12  E-value=3.9  Score=24.61  Aligned_cols=38  Identities=16%  Similarity=0.331  Sum_probs=25.7

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~   94 (114)
                      ...|.|+.|+..|.....+.    ....... |.|+.||....
T Consensus        97 ~~~Y~Cp~C~~~y~~~ea~~----~~d~~~~-f~Cp~Cg~~l~  134 (147)
T smart00531       97 NAYYKCPNCQSKYTFLEANQ----LLDMDGT-FTCPRCGEELE  134 (147)
T ss_pred             CcEEECcCCCCEeeHHHHHH----hcCCCCc-EECCCCCCEEE
Confidence            56789999998888654432    1112333 99999998664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	114
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-04

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.8 bits (101), Expect = 6e-07
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 26 YTCDSCGKVYKLKRSLYRHR---TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE 82
            C+ CG   + K SL  H+            + C  C  R ++   +  H +  H    
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 83 MLSVKHQGP 91
          +   +  GP
Sbjct: 67 LAPQESSGP 75

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.4 bits (93), Expect = 1e-05
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 26 YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAI 76
            C  C      K +L  H  + C   P ++C +C +  KQ  +L  H+  
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMKK 59

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.3 bits (90), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 26 YTCDSCGKVYKLKRSLYRH-RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ 79
          Y C  C +VY    +  RH  T        Y CP C     +K ++  HV I H+
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.2 bits (88), Expect = 3e-05
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 25 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAI 76
          +Y C+ CG   K    L +H        P Y C +C +  K K +L  H+  
Sbjct: 1  KYICEECGIRXKKPSMLKKHIRTHTDVRP-YHCTYCNFSFKTKGNLTKHMKS 51

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 26 YTCDSCGKVYKLKRSLYRHRTLECGKEPR-YQCPHCPYRGKQKVHLKTHVAIKHQG 80
          Y C  C   +    ++  H   +  +    + CPHC     +K  L  H+  +H  
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	114
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.82
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.8
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.78
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.78
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.78
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.77
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.76
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.75
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.75
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.74
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.73
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.73
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.71
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.7
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.7
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.69
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.68
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.67
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.67
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.67
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.67
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.67
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.66
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.65
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.65
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.65
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.65
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.63
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.63
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.61
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.61
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.61
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.6
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.6
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.6
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.59
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.59
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.57
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.56
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.55
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.55
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.54
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.54
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.52
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.51
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.51
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.5
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.48
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.41
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.4
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.4
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.39
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.39
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.39
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.39
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.39
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.38
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.38
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.38
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.38
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.38
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.37
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.37
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.37
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.36
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.36
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.36
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.35
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.35
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.35
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.35
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.34
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.34
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.34
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.34
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.33
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.33
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.32
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.32
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.32
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.3
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.29
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.29
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.28
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.27
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.27
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.27
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.26
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.26
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.26
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.26
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.25
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.25
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.24
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.23
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.23
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.23
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.23
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.22
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.22
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.21
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.21
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.21
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.2
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.2
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.19
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.19
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.19
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.18
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.17
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.17
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.16
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.15
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.14
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.14
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.14
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.11
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.11
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.07
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.07
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.04
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.96
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.93
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.92
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.91
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.9
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.88
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.87
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.83
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.83
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.83
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.82
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.8
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.79
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.76
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.74
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.7
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.67
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.67
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.57
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.56
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.56
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.55
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.51
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.51
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.51
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.5
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.47
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.47
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.47
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.47
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.46
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.44
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.42
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.4
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.39
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.39
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.38
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.38
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.35
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.35
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.33
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.33
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.33
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.32
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.32
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.31
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.31
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.65
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.31
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.31
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.3
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.59
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.24
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.23
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.23
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.54
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.22
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.52
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.16
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.14
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.41
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.34
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.0
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.0
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.36
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.85
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.26
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.28
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.8
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.01
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	94.0
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.82
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.55
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	90.66
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.64
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	87.36
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	87.23
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	86.89
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	85.76
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.02
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	84.44
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	83.65
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	81.97

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=2.6e-22  Score=117.98  Aligned_cols=89  Identities=17%  Similarity=0.181  Sum_probs=78.0

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccc
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEM   93 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f   93 (114)
                      .|...+|.|+++|.|.+|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.||+.|
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F   88 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSW-EKKYPCRYCEKVFPLAEYRTKHEIHHTGERR-YQCLACGKSF   88 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHC-CSCEECSSSSCEESSHHHHHHHHHHHHTCCC-EEESSSCCEE
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCC-CCCeeCCccCeecccccchhhhccccCCCcc-ccCCCCCCCc
Confidence            3444448999999999999999999999999999999 9999999999999999999999999999998 9999999999


Q ss_pred             ccccccCCCcc
Q psy7447          94 LSIKHQGPETL  104 (114)
Q Consensus        94 ~~~~~~~~~~~  104 (114)
                      ........|..
T Consensus        89 ~~~~~L~~H~~   99 (133)
T 2lt7_A           89 INYQFMSSHIK   99 (133)
T ss_dssp             SSHHHHHHHHH
T ss_pred             CCHHHHHHHhH
Confidence            87766555543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.82  E-value=1.9e-21  Score=114.25  Aligned_cols=88  Identities=20%  Similarity=0.314  Sum_probs=80.3

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC---
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE---   82 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p---   82 (114)
                      +.+..+|..|+++ |+++++|.|..|++.|.....|..|++.|++ +++|.|+.|++.|.....|..|++++++++|   
T Consensus        32 F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~  109 (133)
T 2lt7_A           32 YVCLTSLRRHFNI-HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTG-ERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGD  109 (133)
T ss_dssp             ESCHHHHHHHHHH-HHCCSCEECSSSSCEESSHHHHHHHHHHHHT-CCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSS
T ss_pred             cCCHHHHHHHHHH-cCCCCCeeCCccCeecccccchhhhccccCC-CccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCC
Confidence            4566788999998 9999999999999999999999999999999 9999999999999999999999999998754   


Q ss_pred             --cccccCCCccccc
Q psy7447          83 --MLSVKHQGPEMLS   95 (114)
Q Consensus        83 --~~~C~~C~~~f~~   95 (114)
                        +|.|..|+..|..
T Consensus       110 ~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A          110 SKLYRLHPCRSLQIR  124 (133)
T ss_dssp             SCCEEECCCCSSCCC
T ss_pred             CCCeecCCCCchhhh
Confidence              3889999988763

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.80  E-value=5.2e-20  Score=94.11  Aligned_cols=58  Identities=26%  Similarity=0.580  Sum_probs=55.5

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      ||||.|.+|++.|...+.|..|+++|++ ++||.|.+|++.|...+.|..|+++|+|+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLG-YRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHT-CCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCC-CcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7999999999999999999999999999 999999999999999999999999998863

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=2.7e-19  Score=97.21  Aligned_cols=81  Identities=15%  Similarity=0.227  Sum_probs=73.8

Q ss_pred             CCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCC---CCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          11 NLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKE---PRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        11 ~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~---k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      ++..|+++ |+++++|.|..|++.|.....|..|++.+....   ++|.|..|++.|.....|..|+++|+++++ +.|.
T Consensus         2 s~~~H~~~-H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~~~~   79 (86)
T 1x6h_A            2 SSGSSGRT-HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG-VEGE   79 (86)
T ss_dssp             TTTCCSTT-CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCS-CCCC
T ss_pred             Ccccccce-ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCC-cccC
Confidence            46789998 999999999999999999999999998877622   789999999999999999999999999998 9999


Q ss_pred             CCCccc
Q psy7447          88 HQGPEM   93 (114)
Q Consensus        88 ~C~~~f   93 (114)
                      .|+..|
T Consensus        80 ~~~~~~   85 (86)
T 1x6h_A           80 NSGPSS   85 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            998764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=6.3e-21  Score=109.08  Aligned_cols=96  Identities=14%  Similarity=0.058  Sum_probs=83.7

Q ss_pred             cCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHH--hcCCCCCe-eCCCCCccc--CCchHHHHHHHHhcCCC
Q psy7447           7 FSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTL--ECGKEPRY-QCPHCPYRG--KQKVHLKTHVAIKHQGP   81 (114)
Q Consensus         7 ~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~--h~~~~k~~-~C~~c~~~~--~~~~~l~~h~~~~~~~~   81 (114)
                      .+..+|..|+++ |+++++|.|..|++.|.....|..|++.  +.+ .+++ .|..|++.|  .....|..|+++|++++
T Consensus         2 ss~~~l~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~-~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~   79 (115)
T 2dmi_A            2 SSGSSGKLYGSI-FTGASKFRCKDCSAAYDTLVELTVHMNETGHYR-DDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK   79 (115)
T ss_dssp             CCCCCCCCCCCC-CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCB-CSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCS
T ss_pred             ccchhhhhheee-eCCCCCEECCccCchhcCHHHHHHHHHHhCccc-cCCCccCCCCCcccccccHHHHHHHhhccCCCc
Confidence            467889999998 9999999999999999999999999998  766 5554 599999988  88999999999999999


Q ss_pred             CcccccCCCcccccccccCCCccc
Q psy7447          82 EMLSVKHQGPEMLSIKHQGPETLS  105 (114)
Q Consensus        82 p~~~C~~C~~~f~~~~~~~~~~~~  105 (114)
                      | |.|..|++.|........|...
T Consensus        80 ~-~~C~~C~k~f~~~~~L~~H~~~  102 (115)
T 2dmi_A           80 V-LKCMYCGHSFESLQDLSVHMIK  102 (115)
T ss_dssp             S-CBCSSSCCBCSSHHHHHHHHHH
T ss_pred             c-eECCCCCCccCCHHHHHHHHHH
Confidence            8 9999999999987665555433

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.78  E-value=3.3e-20  Score=106.40  Aligned_cols=91  Identities=22%  Similarity=0.328  Sum_probs=82.6

Q ss_pred             ccCccCCCCccccCCCCCCceecC--cchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCc
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEM   83 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~   83 (114)
                      +.+...|..|+++ |.++++|.|.  .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++ 
T Consensus        18 f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-   94 (119)
T 2jp9_A           18 YFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG-VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKP-   94 (119)
T ss_dssp             BSCHHHHHHHHHH-HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHTCCC-
T ss_pred             hCCHHHHHHHHHh-hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC-CCCccCCccCchhCCHHHHHHHHHHhcCCCC-
Confidence            4456678889888 8899999999  799999999999999999999 9999999999999999999999999999998 


Q ss_pred             ccc--cCCCccccccccc
Q psy7447          84 LSV--KHQGPEMLSIKHQ   99 (114)
Q Consensus        84 ~~C--~~C~~~f~~~~~~   99 (114)
                      |.|  +.|++.|.+....
T Consensus        95 ~~C~~~~C~~~f~~~~~L  112 (119)
T 2jp9_A           95 FSCRWPSCQKKFARSDEL  112 (119)
T ss_dssp             EECCSTTCCCEESSHHHH
T ss_pred             eeCCCCCCccccCCHHHH
Confidence            999  7899999876543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.78  E-value=1.6e-20  Score=115.75  Aligned_cols=94  Identities=21%  Similarity=0.318  Sum_probs=70.6

Q ss_pred             cCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccc
Q psy7447           7 FSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   86 (114)
Q Consensus         7 ~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C   86 (114)
                      .+..+|..|+++ |.++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|
T Consensus        88 ~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~-~~C  164 (190)
T 2i13_A           88 SQRANLRAHQRT-HTGEKPYACPECGKSFSQLAHLRAHQRTHTG-EKPYKCPECGKSFSREDNLHTHQRTHTGEKP-YKC  164 (190)
T ss_dssp             SCHHHHHHHHHH-HHTCCCEECTTTCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EEC
T ss_pred             CCHHHHHHHHHh-cCCCCCCcCCCCCCccCCHHHHHHHHHHhCC-CCCeECCCCCcccCCHHHHHHHHHhcCCCCC-eEC
Confidence            345566677776 7777778888888888877778888888877 7788888888888888888888888887777 888


Q ss_pred             cCCCcccccccccCCCc
Q psy7447          87 KHQGPEMLSIKHQGPET  103 (114)
Q Consensus        87 ~~C~~~f~~~~~~~~~~  103 (114)
                      +.|++.|........|.
T Consensus       165 ~~C~~~f~~~~~L~~H~  181 (190)
T 2i13_A          165 PECGKSFSRRDALNVHQ  181 (190)
T ss_dssp             TTTCCEESSHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHH
Confidence            88888887665544443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=9.6e-19  Score=93.69  Aligned_cols=73  Identities=22%  Similarity=0.463  Sum_probs=68.3

Q ss_pred             CCCCCceecCc--chhhcCCchHHHHHHH-HhcCCCCCeeCCC--CCcccCCchHHHHHHHHhcCCCCcccccCCCcccc
Q psy7447          20 PLLQFRYTCDS--CGKVYKLKRSLYRHRT-LECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        20 h~~~k~~~C~~--C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~   94 (114)
                      .+++++|.|..  |++.|.....|..|++ .|.+ .++|.|..  |++.|.....|..|+++|++++| |.|..|++.|.
T Consensus         2 s~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~k~F~   79 (79)
T 2dlk_A            2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEFSGPSSG   79 (79)
T ss_dssp             CSCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCSSSCCCC
T ss_pred             CCCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCCCCC-eeCCCCCCCCC
Confidence            45788999987  9999999999999999 7999 99999999  99999999999999999999998 99999999883

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=7.6e-20  Score=105.48  Aligned_cols=95  Identities=18%  Similarity=0.318  Sum_probs=84.4

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHH---hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTL---ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~---h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      +.+...|..|+++ |.++++|.|..|++.|.....|..|+..   +.+ .++|.|..|++.|.....|..|+++|++++|
T Consensus        17 f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   94 (124)
T 2dlq_A           17 FLSKYYLKVHNRK-HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS-EQVFTCSVCQETFRRRMELRLHMVSHTGEMP   94 (124)
T ss_dssp             CSSHHHHHHHHHH-HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSC-CCCEECSSSCCEESSHHHHHHHHHHHSSSCS
T ss_pred             CCCHHHHHHHHHh-CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            4456678889988 8899999999999999999999999986   466 8899999999999999999999999999998


Q ss_pred             cccccCCCcccccccccCCCc
Q psy7447          83 MLSVKHQGPEMLSIKHQGPET  103 (114)
Q Consensus        83 ~~~C~~C~~~f~~~~~~~~~~  103 (114)
                       |.|..|++.|........|.
T Consensus        95 -~~C~~C~~~f~~~~~l~~H~  114 (124)
T 2dlq_A           95 -YKCSSCSQQFMQKKDLQSHM  114 (124)
T ss_dssp             -EECSSSCCEESSHHHHHHHH
T ss_pred             -ccCCCccchhCCHHHHHHHH
Confidence             99999999999876655554

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=2.7e-19  Score=99.11  Aligned_cols=84  Identities=19%  Similarity=0.289  Sum_probs=76.4

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccccc
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   99 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~   99 (114)
                      +.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|++.|+++++ |.|..|++.|......
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l   80 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG-VKPYKCKTCDYAAADSSSLNKHLRIHSDERP-FKCQICPYASRNSSQL   80 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCCCC-EECSSSSCEESSHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCC-CCCEeCCCCCCccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHHH
Confidence            5678999999999999999999999999999 9999999999999999999999999999998 9999999999987665


Q ss_pred             CCCccc
Q psy7447         100 GPETLS  105 (114)
Q Consensus       100 ~~~~~~  105 (114)
                      ..|...
T Consensus        81 ~~H~~~   86 (96)
T 2dmd_A           81 TVHLRS   86 (96)
T ss_dssp             HHHHTT
T ss_pred             HHHHHH
Confidence            555444

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.2e-19  Score=102.95  Aligned_cols=83  Identities=23%  Similarity=0.293  Sum_probs=76.2

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccccc
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   99 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~   99 (114)
                      |+++++|.| .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++ |.|..|++.|......
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP-YECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTTCCCCC-EECSSSCCEESCHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCC-CcCccCCCCCcccCCHHHHHHHHHHcCCCCC-eeCCCCcchhcCHHHH
Confidence            889999999 999999999999999999999 9999999999999999999999999999998 9999999999977665


Q ss_pred             CCCccc
Q psy7447         100 GPETLS  105 (114)
Q Consensus       100 ~~~~~~  105 (114)
                      ..|...
T Consensus        82 ~~H~~~   87 (110)
T 2csh_A           82 HRHVTS   87 (110)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555433

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.76  E-value=1e-19  Score=105.11  Aligned_cols=96  Identities=21%  Similarity=0.289  Sum_probs=85.1

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHHHHhcCCCCc
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEM   83 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~~~~~p~   83 (114)
                      +.+..+|..|+++ | ++++|.|..|++.|.....|..|++.|.+ +++|.|..  |++.|.....|..|+++|+++++ 
T Consensus        17 f~~~~~l~~H~~~-h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-   92 (124)
T 1ubd_C           17 FRDNSAMRKHLHT-H-GPRVHVCAECGKAFVESSKLKRHQLVHTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP-   92 (124)
T ss_dssp             ESSHHHHHHHHGG-G-SCCCEECTTTCCEESSHHHHHHHGGGTSC-CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCC-
T ss_pred             cCCHHHHHHHHHH-c-CCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCc-
Confidence            3456678889988 7 88999999999999999999999999999 99999986  99999999999999999999998 


Q ss_pred             cccc--CCCcccccccccCCCccc
Q psy7447          84 LSVK--HQGPEMLSIKHQGPETLS  105 (114)
Q Consensus        84 ~~C~--~C~~~f~~~~~~~~~~~~  105 (114)
                      |.|.  .|++.|.+......|...
T Consensus        93 ~~C~~~~C~~~f~~~~~L~~H~~~  116 (124)
T 1ubd_C           93 YVCPFDGCNKKFAQSTNLKSHILT  116 (124)
T ss_dssp             CCCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             eECCCCCCCCccCCHHHHHHHHHH
Confidence            9996  599999988776655444

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=3.1e-18  Score=94.62  Aligned_cols=82  Identities=24%  Similarity=0.401  Sum_probs=74.5

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC--CCcccccCCCccccccc
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG--PEMLSVKHQGPEMLSIK   97 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~--~p~~~C~~C~~~f~~~~   97 (114)
                      .+++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|++.|+++  ++ |.|..|++.|....
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~-~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP-YICQSCGKGFSRPD   79 (95)
T ss_dssp             CCCCSCEECSSSCCEESSSHHHHHHHHHSCS-SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSS-BCCSSSCCCBSSHH
T ss_pred             CCCCCCeECCCCCCccCChHHHHHHHHhcCC-CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCc-eECCCccchhCCHH
Confidence            3578999999999999999999999999999 99999999999999999999999999987  66 99999999999776


Q ss_pred             ccCCCc
Q psy7447          98 HQGPET  103 (114)
Q Consensus        98 ~~~~~~  103 (114)
                      ....|.
T Consensus        80 ~L~~H~   85 (95)
T 2yt9_A           80 HLNGHI   85 (95)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            655443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.75  E-value=7.5e-19  Score=96.18  Aligned_cols=82  Identities=22%  Similarity=0.398  Sum_probs=73.1

Q ss_pred             CCCceecC--cchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccccc
Q psy7447          22 LQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   99 (114)
Q Consensus        22 ~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~   99 (114)
                      ++++|.|.  .|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|++.|+++++ |.|..|++.|.+....
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l   78 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-FACDICGRKFARSDER   78 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHCCCC-EECTTTCCEESSHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCC-CCCccCCCCCcccCCHHHHHHHHHHcCCCCC-ccCCCCCchhCCHHHH
Confidence            46899998  699999999999999999999 9999999999999999999999999999998 9999999999987665


Q ss_pred             CCCccc
Q psy7447         100 GPETLS  105 (114)
Q Consensus       100 ~~~~~~  105 (114)
                      ..|...
T Consensus        79 ~~H~~~   84 (90)
T 1a1h_A           79 KRHTKI   84 (90)
T ss_dssp             HHHHGG
T ss_pred             HHHHHH
Confidence            555443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.74  E-value=1.6e-18  Score=97.63  Aligned_cols=84  Identities=17%  Similarity=0.322  Sum_probs=75.9

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccccc
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   99 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~   99 (114)
                      ...+++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++ |.|..|++.|......
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L   89 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTD-ERPYTCDICHKAFRRQDHLRDHRYIHSKEKP-FKCQECGKGFCQSRTL   89 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCC-SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT-TSCSSSCCCCSSHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCCCCccchhCCHHHHHHHHHHhCCCCC-eECCCcCCcccCHHHH
Confidence            4567899999999999999999999999999 9999999999999999999999999999998 9999999999977665


Q ss_pred             CCCccc
Q psy7447         100 GPETLS  105 (114)
Q Consensus       100 ~~~~~~  105 (114)
                      ..|...
T Consensus        90 ~~H~~~   95 (106)
T 2ee8_A           90 AVHKTL   95 (106)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555433

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=3.9e-18  Score=91.72  Aligned_cols=74  Identities=23%  Similarity=0.381  Sum_probs=68.8

Q ss_pred             ceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccC
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQG  100 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~  100 (114)
                      ||.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|++.|+++++ |.|..|++.|.+.....
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~   74 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD-TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP-HKCQVCGKAFSQSSNLI   74 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT-CCCEECSSSCCEESSHHHHHHHHHHHHTCCC-EECTTTSCEESSHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC-CCCeeCCcCChhhCCHHHHHHHHHHhcCCCC-CcCCCcchhhCChHHHH
Confidence            68999999999999999999999999 9999999999999999999999999999998 99999999998765543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.73  E-value=7.8e-19  Score=105.00  Aligned_cols=99  Identities=17%  Similarity=0.209  Sum_probs=86.3

Q ss_pred             ccCccCCCCccccCCCCCCc--------eecCcchhhcCCchHHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHHH
Q psy7447           6 RFSEFNLPPHTLFNPLLQFR--------YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVA   75 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~--------~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~   75 (114)
                      +.+..+|..|+++.|.++++        |.|..|++.|.....|..|++.|.+ .++|.|..  |++.|.....|..|++
T Consensus        35 f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~  113 (155)
T 2rpc_A           35 FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG-EKPFPCPFPGCGKIFARSENLKIHKR  113 (155)
T ss_dssp             BSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC-CCSEECSCTTTCCEESCHHHHHHHHT
T ss_pred             cCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC-CCcccCCcCCCCCccCCHHHHHHHHH
Confidence            44566788898876777665        7899999999999999999999999 99999998  9999999999999999


Q ss_pred             HhcCCCCcccccC--CCcccccccccCCCcccc
Q psy7447          76 IKHQGPEMLSVKH--QGPEMLSIKHQGPETLSI  106 (114)
Q Consensus        76 ~~~~~~p~~~C~~--C~~~f~~~~~~~~~~~~~  106 (114)
                      +|+++++ |.|.+  |++.|........|...+
T Consensus       114 ~h~~~~~-~~C~~~~C~k~f~~~~~L~~H~~~H  145 (155)
T 2rpc_A          114 THTGEKP-FKCEFEGCDRRFANSSDRKKHMHVH  145 (155)
T ss_dssp             TTCSSCS-BCCSSTTCCCCBSSHHHHHHSSTTT
T ss_pred             hhCCCCC-ccCCCCCCCCccCCHHHHHHHHHHh
Confidence            9999998 99997  999999877766665443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.73  E-value=1.9e-18  Score=106.50  Aligned_cols=87  Identities=24%  Similarity=0.437  Sum_probs=49.0

Q ss_pred             CccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447           8 SEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus         8 ~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      +...|..|++. |.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|++.|+++++ |.|.
T Consensus        33 ~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~  109 (190)
T 2i13_A           33 RSDHLAEHQRT-HTGEKPYKCPECGKSFSDKKDLTRHQRTHTG-EKPYKCPECGKSFSQRANLRAHQRTHTGEKP-YACP  109 (190)
T ss_dssp             SSHHHHHGGGC-C---CCEECTTTCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHHHHHTCCC-EECT
T ss_pred             CHHHHHHHHHH-cCCCCCccCCCcCchhCCHHHHHHHHHhcCC-CCCccCcccCCccCCHHHHHHHHHhcCCCCC-CcCC
Confidence            33445555555 5556666666666666666666666666655 5556666666666665566666655555555 5555


Q ss_pred             CCCccccccc
Q psy7447          88 HQGPEMLSIK   97 (114)
Q Consensus        88 ~C~~~f~~~~   97 (114)
                      .|++.|.+..
T Consensus       110 ~C~~~f~~~~  119 (190)
T 2i13_A          110 ECGKSFSQLA  119 (190)
T ss_dssp             TTCCEESSHH
T ss_pred             CCCCccCCHH
Confidence            5555555443

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.2e-17  Score=89.08  Aligned_cols=65  Identities=31%  Similarity=0.520  Sum_probs=62.5

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccc
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   86 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C   86 (114)
                      +.++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p-~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTG-EKPYKCDECGKAFIQRSHLIGHHRVHTGSGP-SSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC-SCSEECSSSCCEESSHHHHHHHGGGSCCCCC-CCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCC-CcCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCC
Confidence            6788999999999999999999999999999 9999999999999999999999999999998 987

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=5.4e-18  Score=95.74  Aligned_cols=85  Identities=15%  Similarity=0.038  Sum_probs=75.7

Q ss_pred             CCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcc
Q psy7447          13 PPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPE   92 (114)
Q Consensus        13 ~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~   92 (114)
                      ..++++ |.++++|.|..|++.|.....|..|++.|.   ++|.|..|++.|.....|..|+. |++++| |.|..|++.
T Consensus         5 ss~~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~---~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~-~~C~~C~~~   78 (107)
T 1wjp_A            5 SSGASP-VENKEVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEHES-KCEYKK-LTCLECMRT   78 (107)
T ss_dssp             CCCCCC-CCCCCCCBCTTTCCBCSSHHHHHHHHHHHH---HSBCCTTTCCCBSSHHHHHHHHH-HCSTGG-GEEGGGTEE
T ss_pred             cccCcc-cCCCcCeECCCCCCccCCHHHHHHHHHHCC---CCccCCCCCCccCCHHHHHHHHH-cCCCCC-ccCccccch
Confidence            456677 899999999999999999999999999984   58999999999999999999995 989888 999999999


Q ss_pred             cccccccCCCc
Q psy7447          93 MLSIKHQGPET  103 (114)
Q Consensus        93 f~~~~~~~~~~  103 (114)
                      |........|.
T Consensus        79 f~~~~~L~~H~   89 (107)
T 1wjp_A           79 FKSSFSIWRHQ   89 (107)
T ss_dssp             CSSHHHHHHHH
T ss_pred             hCCHHHHHHHH
Confidence            99876655554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.7e-18  Score=103.45  Aligned_cols=90  Identities=18%  Similarity=0.175  Sum_probs=53.7

Q ss_pred             ccCccCCCCccccCCCCCCceecCc--chhhcCCchHHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHH-HHhcCC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHV-AIKHQG   80 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~-~~~~~~   80 (114)
                      +.+...|..|+++ |.++++|.|..  |++.|.....|..|++.|.+ +++|.|..  |++.|.....|..|+ +.|+++
T Consensus        49 f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~  126 (155)
T 2gli_A           49 FKAQYMLVVHMRR-HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG-EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE  126 (155)
T ss_dssp             CSSHHHHHHHTHH-HHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTT-CCCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             hhhHHHHHHHHHh-cCCCCCccCCCCCCCCcccCHHHHHHHHHHcCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3444455556555 55666666653  66666666666666666666 66666665  666666666666665 555555


Q ss_pred             CCcccccC--CCcccccccc
Q psy7447          81 PEMLSVKH--QGPEMLSIKH   98 (114)
Q Consensus        81 ~p~~~C~~--C~~~f~~~~~   98 (114)
                      ++ |.|..  |++.|.+...
T Consensus       127 ~~-~~C~~~~C~~~f~~~~~  145 (155)
T 2gli_A          127 KP-YVCKLPGCTKRYTDPSS  145 (155)
T ss_dssp             CC-EECCSTTTCCEESSHHH
T ss_pred             CC-eeCCCCCCccccCCHHH
Confidence            55 66655  6666654433

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.70  E-value=4.6e-17  Score=86.18  Aligned_cols=63  Identities=29%  Similarity=0.536  Sum_probs=60.4

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcc
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEML   84 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~   84 (114)
                      +.++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|++++| |
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTG-EKPYRCNICGAQFNRPANLKTHTRIHSGEKP-Y   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC-CCSEECTTTCCEESCHHHHHHHHHHHCCSCC-C
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCC-CCCEECCCCCchhCCHHHHHHHHHhcCCCCC-C
Confidence            6788999999999999999999999999999 9999999999999999999999999999987 5

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.2e-17  Score=93.87  Aligned_cols=70  Identities=14%  Similarity=0.189  Sum_probs=63.8

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHH-Hh---cCCCCCeeCCCCCcccCCchHHHHH-HHHhcCCCCcccccCCCc
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRT-LE---CGKEPRYQCPHCPYRGKQKVHLKTH-VAIKHQGPEMLSVKHQGP   91 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h---~~~~k~~~C~~c~~~~~~~~~l~~h-~~~~~~~~p~~~C~~C~~   91 (114)
                      -.+++||.|..|++.|.....|..|++ .|   .+ +++|.|..|++.|...+.|..| +++|+|++| |.|..+..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~-ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekp-y~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVL-NSSYVCVECNFLTKRYDALSEHNLKYHPGEEN-FKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCC-SCCEEETTTTEEESSTHHHHTHHHHTSTTCCC-EEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCC-CCCcCCCCCCcccCCHHHHHHHHHHhcCCCCC-eeCCcccC
Confidence            468899999999999999999999997 58   56 8899999999999999999999 899999998 99997554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=7.5e-17  Score=86.00  Aligned_cols=71  Identities=17%  Similarity=0.271  Sum_probs=63.1

Q ss_pred             CCCCccccCCCCCCceecCcchhhcCCchHHHHHHH-HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          11 NLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRT-LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        11 ~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      ++..|+++ |+++++|.|..|++.|.....|..|++ .|.+..++|.|..|++.|.....|..|++.+++..+
T Consensus         2 s~~~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            2 SSGSSGRT-HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCC-CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CCCccccc-cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            46789998 999999999999999999999999997 676513899999999999999999999999877654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.68  E-value=8.6e-17  Score=92.00  Aligned_cols=81  Identities=23%  Similarity=0.298  Sum_probs=73.7

Q ss_pred             CCCCceecCc--chhhcCCchHHHHHHHHhcCCCCCeeCC--CCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccc
Q psy7447          21 LLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   96 (114)
Q Consensus        21 ~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~--~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~   96 (114)
                      +++++|.|..  |++.|.....|..|++.|.+ .++|.|.  .|++.|.....|..|++.|+++++ |.|..|++.|.+.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~   79 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP-FQCKTCQRKFSRS   79 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC-CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCC-ccCCccCchhCCH
Confidence            5789999997  99999999999999999999 9999999  799999999999999999999998 9999999999876


Q ss_pred             cccCCCc
Q psy7447          97 KHQGPET  103 (114)
Q Consensus        97 ~~~~~~~  103 (114)
                      .....|.
T Consensus        80 ~~l~~H~   86 (119)
T 2jp9_A           80 DHLKTHT   86 (119)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6544443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.2e-16  Score=83.67  Aligned_cols=63  Identities=21%  Similarity=0.415  Sum_probs=60.3

Q ss_pred             CCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          19 NPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        19 ~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      .|+++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|++++|
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCC-SCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            37889999999999999999999999999999 9999999999999999999999999999887

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.67  E-value=1.6e-17  Score=93.50  Aligned_cols=78  Identities=24%  Similarity=0.364  Sum_probs=71.2

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccc
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS   85 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~   85 (114)
                      +.+...|..|+++ |.++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|+++++ |.
T Consensus        27 f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~-~~  103 (106)
T 2ee8_A           27 FTKSYNLLIHERT-HTDERPYTCDICHKAFRRQDHLRDHRYIHSK-EKPFKCQECGKGFCQSRTLAVHKTLHMQTSS-PT  103 (106)
T ss_dssp             CSSHHHHHHHHHH-HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCC-CCTTSCSSSCCCCSSHHHHHHHHHHTTSCCC-CC
T ss_pred             cCCHHHHHHHHHH-cCCCCCcCCCCccchhCCHHHHHHHHHHhCC-CCCeECCCcCCcccCHHHHHHHHHHhCCCCC-Cc
Confidence            3455667889888 8899999999999999999999999999999 9999999999999999999999999999988 75


Q ss_pred             c
Q psy7447          86 V   86 (114)
Q Consensus        86 C   86 (114)
                      +
T Consensus       104 ~  104 (106)
T 2ee8_A          104 A  104 (106)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=2.1e-16  Score=83.22  Aligned_cols=66  Identities=27%  Similarity=0.473  Sum_probs=61.5

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      .+.++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|+++.
T Consensus         4 ~~~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            4 GSSGI-HSGEKPYGCVECGKAFSRSSILVQHQRVHTG-EKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCCT-TTTCCCEECSSSCCEESSHHHHHHHHHGGGC-SCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCcc-cCCCCCccCCCCCCccCCHHHHHHHHHhcCC-CCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            34566 8999999999999999999999999999999 999999999999999999999999998764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.67  E-value=9.1e-18  Score=103.39  Aligned_cols=95  Identities=20%  Similarity=0.226  Sum_probs=73.5

Q ss_pred             ccCccCCCCccccCCCCCCceecC--cchhhcCCchHHHHHH-HHh-cCCCCCeeC--CCCCcccCCchHHHHHHHHhcC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHR-TLE-CGKEPRYQC--PHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~-~~h-~~~~k~~~C--~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +.+...|..|+++ |.++++|.|.  .|++.|.....|..|+ +.| .+ .++|.|  ..|++.|.....|..|+++|++
T Consensus        54 f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  131 (190)
T 1tf6_A           54 FTSLHHLTRHSLT-HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK-ICVYVCHFENCGKAFKKHNQLKVHQFSHTQ  131 (190)
T ss_dssp             CSSHHHHHHHHTT-TTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTT-TSCCEECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred             hCCHHHHHHHHHH-ccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCC-cceeeCCCCCCccccCCHHHHHHHHHHhCC
Confidence            3455667778877 8888888888  7888888888888888 556 34 678888  7788888888888888888888


Q ss_pred             CCCcccccC--CCcccccccccCCCc
Q psy7447          80 GPEMLSVKH--QGPEMLSIKHQGPET  103 (114)
Q Consensus        80 ~~p~~~C~~--C~~~f~~~~~~~~~~  103 (114)
                      ++| |.|+.  |++.|.+......|.
T Consensus       132 ~~~-~~C~~~~C~k~F~~~~~L~~H~  156 (190)
T 1tf6_A          132 QLP-YECPHEGCDKRFSLPSRLKRHE  156 (190)
T ss_dssp             SCS-SBCCSSSCCCBCSSHHHHHHHH
T ss_pred             CCC-ccCCCCCCCchhcCHHHHHHHH
Confidence            887 88877  888888765544443

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.67  E-value=3.8e-17  Score=89.13  Aligned_cols=78  Identities=22%  Similarity=0.362  Sum_probs=70.7

Q ss_pred             CCceecCc--chhhcCCchHHHHHHHHhcCCCCCeeCC--CCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccc
Q psy7447          23 QFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKH   98 (114)
Q Consensus        23 ~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~--~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~   98 (114)
                      .++|.|..  |++.|.....|..|++.|.+ .++|.|.  .|++.|.....|..|++.|+++++ |.|..|++.|.....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~   80 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTG-EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP-FQCQKCDRAFSRSDH   80 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCS-SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC-EECSSSSCEESSHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCC-CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC-ccCCCCCcccCCHHH
Confidence            57899999  99999999999999999999 9999997  699999999999999999999998 999999999987655


Q ss_pred             cCCC
Q psy7447          99 QGPE  102 (114)
Q Consensus        99 ~~~~  102 (114)
                      ...|
T Consensus        81 l~~H   84 (89)
T 2wbs_A           81 LALH   84 (89)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4333

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.66  E-value=3.2e-17  Score=91.40  Aligned_cols=76  Identities=17%  Similarity=0.166  Sum_probs=67.4

Q ss_pred             CccCCCCccccCCCCCCceecCcchhhcC-CchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccc
Q psy7447           8 SEFNLPPHTLFNPLLQFRYTCDSCGKVYK-LKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS   85 (114)
Q Consensus         8 ~~~~l~~h~~~~h~~~k~~~C~~C~~~f~-~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~   85 (114)
                      ....+..|+++ |.++++|.|..|++.|. ....|..|++.|.+.+++|.|..|++.|.....|..|+++|++++| ..
T Consensus         8 ~~~~~~~h~~~-h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp-~~   84 (98)
T 2gqj_A            8 PGGPEEQWQRA-IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP-SD   84 (98)
T ss_dssp             CCCSCSHHHHT-TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS-SC
T ss_pred             CCCcHHHHHHH-hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC-CC
Confidence            34556678888 99999999999999999 9999999999987535789999999999999999999999999988 53

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.66  E-value=1.5e-17  Score=90.90  Aligned_cols=75  Identities=19%  Similarity=0.254  Sum_probs=67.1

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      +.+...|..|+++ |.++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|+++|+++++
T Consensus        16 f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           16 FSQSGSLTRHIRI-HTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             ESSHHHHHHHHHH-HHCCCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             cCCHHHHHHHHHH-hCCCCCccCCCCCcccCCHHHHHHHHHHcCC-CCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence            3455677889988 8899999999999999999999999999999 9999999999999999999999999998753

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.65  E-value=1.2e-17  Score=91.22  Aligned_cols=74  Identities=18%  Similarity=0.257  Sum_probs=68.1

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccccc
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   99 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~   99 (114)
                      ++||.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|++.+++ .+ |.|..|++.|......
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~-~~c~~C~~~f~~~~~L   74 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGRKFARSDERKRHRDIQHI-LP-ILEDKVEELLSKNYHL   74 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC-CCCEECTTTCCEESSHHHHHHHHHHHTH-HH-HHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCC-CCCccCCCCCCccCCHHHHHHHHHHhCC-Cc-chHHHHHHHHHHHhhh
Confidence            5899999999999999999999999999 9999999999999999999999999985 55 9999999999876543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.65  E-value=5.4e-16  Score=86.17  Aligned_cols=78  Identities=22%  Similarity=0.312  Sum_probs=70.7

Q ss_pred             CCCCceecCc--chhhcCCchHHHHHHHHhcCCCCCeeCC--CCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccc
Q psy7447          21 LLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   96 (114)
Q Consensus        21 ~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~--~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~   96 (114)
                      ...++|.|..  |++.|.....|..|++.|.+ .++|.|.  .|++.|.....|..|++.|+++++ |.|..|++.|...
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~   88 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG-EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP-FQCGVCNRSFSRS   88 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSC-CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS-CBCSSSCCBCSSH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCC-CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC-eECCCCcCccCCH
Confidence            3567899996  99999999999999999999 9999996  699999999999999999999998 9999999999876


Q ss_pred             cccC
Q psy7447          97 KHQG  100 (114)
Q Consensus        97 ~~~~  100 (114)
                      ....
T Consensus        89 ~~l~   92 (100)
T 2ebt_A           89 DHLA   92 (100)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=8.1e-17  Score=89.01  Aligned_cols=75  Identities=20%  Similarity=0.356  Sum_probs=69.8

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      +.+...|..|+++ |.++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|+++++
T Consensus        18 f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           18 FSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHSD-ERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CCCHHHHHHHGGG-CCCCCSEECSSSCCEESSHHHHHHHHHHSCC-CCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             cCCHHHHHHHHHh-cCCCCCEeCCCCCCccCCHHHHHHHHHHhCC-CCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            4456678899998 9999999999999999999999999999999 9999999999999999999999999999876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=5.2e-17  Score=96.91  Aligned_cols=96  Identities=17%  Similarity=0.133  Sum_probs=82.8

Q ss_pred             ccCccCCCCcccc--CCCCCCceecCcc-----hhhcCCchHHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHHHH
Q psy7447           6 RFSEFNLPPHTLF--NPLLQFRYTCDSC-----GKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAI   76 (114)
Q Consensus         6 ~~~~~~l~~h~~~--~h~~~k~~~C~~C-----~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~   76 (114)
                      +.+...|..|++.  .|.++++|.|..|     ++.|.....|..|++.|.+ .++|.|..  |++.|.....|..|++.
T Consensus        13 f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~   91 (155)
T 2gli_A           13 FDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG-EKPHKCTFEGCRKSYSRLENLKTHLRS   91 (155)
T ss_dssp             CSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC-CCCCCCCSTTCCCCCSSHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC-CCCccCCCCCCCCcccCHHHHHHHHHH
Confidence            4566778888873  3888999998753     4899999999999999999 99999985  99999999999999999


Q ss_pred             hcCCCCcccccC--CCcccccccccCCCc
Q psy7447          77 KHQGPEMLSVKH--QGPEMLSIKHQGPET  103 (114)
Q Consensus        77 ~~~~~p~~~C~~--C~~~f~~~~~~~~~~  103 (114)
                      |+++++ |.|+.  |++.|.+......|.
T Consensus        92 h~~~~~-~~C~~~~C~~~f~~~~~L~~H~  119 (155)
T 2gli_A           92 HTGEKP-YMCEHEGCSKAFSNASDRAKHQ  119 (155)
T ss_dssp             TTTCCC-EECCSTTCCCEESSSSTTHHHH
T ss_pred             cCCCCC-eeCCCCCCCCccCCHHHHHHHH
Confidence            999998 99998  999998876655554

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=6.1e-16  Score=88.95  Aligned_cols=81  Identities=19%  Similarity=0.196  Sum_probs=72.2

Q ss_pred             CCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHH---hcCCCCcccccCCCccccccc
Q psy7447          21 LLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAI---KHQGPEMLSVKHQGPEMLSIK   97 (114)
Q Consensus        21 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~---~~~~~p~~~C~~C~~~f~~~~   97 (114)
                      +++++|.|..|++.|.....|..|++.|.+ .++|.|..|++.|.....|..|++.   +.++++ |.|..|++.|.+..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~-~~C~~C~~~f~~~~   80 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTG-EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-FTCSVCQETFRRRM   80 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSS-CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC-EECSSSCCEESSHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCC-CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC-eECCCCCCccCCHH
Confidence            578999999999999999999999999999 9999999999999999999999996   456666 99999999999776


Q ss_pred             ccCCCc
Q psy7447          98 HQGPET  103 (114)
Q Consensus        98 ~~~~~~  103 (114)
                      ....|.
T Consensus        81 ~l~~H~   86 (124)
T 2dlq_A           81 ELRLHM   86 (124)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            554443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.63  E-value=6e-17  Score=86.99  Aligned_cols=72  Identities=25%  Similarity=0.360  Sum_probs=66.0

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +.+...|..|+++ |.++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|+|
T Consensus        11 f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           11 FKRSSTLSTHLLI-HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG-EKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             ESSHHHHHHHHHH-HHTCCCEECSSSCCEESSHHHHHHHHHHHHT-CCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             ccCchhHHHHHHH-cCCCCCeeCCcCChhhCCHHHHHHHHHHhcC-CCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            3456678889988 8899999999999999999999999999999 9999999999999999999999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.61  E-value=1.5e-15  Score=82.57  Aligned_cols=61  Identities=20%  Similarity=0.292  Sum_probs=55.7

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHH-HhcCCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQGP   81 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~-~~~~~~   81 (114)
                      +...++|.|.+|++.|.....|..|++.|++ ++||.|..|++.|.....|..|++ +|++|.
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHA-AQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSC-SSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccC-CCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            6678899999999999999999999999999 999999999999999999999975 555553

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.61  E-value=5.1e-17  Score=97.06  Aligned_cols=79  Identities=19%  Similarity=0.364  Sum_probs=72.9

Q ss_pred             ccCccCCCCccccCCCCCCceecCc--chhhcCCchHHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHHHHhcCCC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +.+...|..|+++ |.++++|.|..  |++.|.....|..|++.|.+ +++|.|..  |++.|.....|..|+++|++++
T Consensus        72 f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k  149 (155)
T 2rpc_A           72 FKAKYKLVNHIRV-HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG-EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK  149 (155)
T ss_dssp             CSSHHHHHHHTHH-HHCCCSEECSCTTTCCEESCHHHHHHHHTTTCS-SCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCC
T ss_pred             cCCHHHHHHHHHh-cCCCCcccCCcCCCCCccCCHHHHHHHHHhhCC-CCCccCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4456678889998 99999999998  99999999999999999999 99999997  9999999999999999999999


Q ss_pred             Cccccc
Q psy7447          82 EMLSVK   87 (114)
Q Consensus        82 p~~~C~   87 (114)
                      | |.|.
T Consensus       150 ~-~~c~  154 (155)
T 2rpc_A          150 S-GPSS  154 (155)
T ss_dssp             C-SCSC
T ss_pred             C-CCCC
Confidence            8 9885

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.61  E-value=7.7e-17  Score=99.22  Aligned_cols=93  Identities=22%  Similarity=0.279  Sum_probs=80.3

Q ss_pred             ccCccCCCCccccCC-CCCCceec--CcchhhcCCchHHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHHHHhcCC
Q psy7447           6 RFSEFNLPPHTLFNP-LLQFRYTC--DSCGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h-~~~k~~~C--~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +.+..+|..|++..| .++++|.|  ..|++.|.....|..|++.|.+ +++|.|..  |++.|.....|..|+++|++ 
T Consensus        84 f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-  161 (190)
T 1tf6_A           84 FTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG-  161 (190)
T ss_dssp             ESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS-SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS-
T ss_pred             cCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC-CCCccCCCCCCCchhcCHHHHHHHHHHhCC-
Confidence            445667888884447 57899999  9999999999999999999999 99999988  99999999999999999987 


Q ss_pred             CCcccccC---CCcccccccccCCCc
Q psy7447          81 PEMLSVKH---QGPEMLSIKHQGPET  103 (114)
Q Consensus        81 ~p~~~C~~---C~~~f~~~~~~~~~~  103 (114)
                         |.|..   |++.|.+......|.
T Consensus       162 ---~~C~~~~~C~~~f~~~~~l~~H~  184 (190)
T 1tf6_A          162 ---YPCKKDDSCSFVGKTWTLYLKHV  184 (190)
T ss_dssp             ---CCCCSTTTCCCCCSCHHHHHHHH
T ss_pred             ---CcCCCCCcCCCccccHHHHHHHH
Confidence               88998   999999776544443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.60  E-value=1.4e-15  Score=76.45  Aligned_cols=57  Identities=30%  Similarity=0.578  Sum_probs=50.5

Q ss_pred             CCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          22 LQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        22 ~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      ++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|++.|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTG-EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHC-CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCC-CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            46899999999999999999999999999 9999999999999999999999999874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=5.4e-18  Score=89.28  Aligned_cols=72  Identities=15%  Similarity=0.193  Sum_probs=65.0

Q ss_pred             CccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447           8 SEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus         8 ~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      +..+|..|+++ |.++++|.|..|++.|.....|..        +++|.|..|++.|.....|..|+++|++++| |.|+
T Consensus         2 ~~~~l~~H~~~-h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~-~~C~   71 (73)
T 2ctu_A            2 SSGSSGKRQKI-HLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKT-SGPS   71 (73)
T ss_dssp             CCCSCCCCCCC-CCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCC-SSCC
T ss_pred             cchhHHHHHHH-hCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCC-CCCC
Confidence            45788999998 999999999999999998877654        5689999999999999999999999999998 9999


Q ss_pred             CC
Q psy7447          88 HQ   89 (114)
Q Consensus        88 ~C   89 (114)
                      .|
T Consensus        72 ~C   73 (73)
T 2ctu_A           72 SG   73 (73)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=7.9e-16  Score=79.58  Aligned_cols=59  Identities=27%  Similarity=0.511  Sum_probs=55.7

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHH-h-cCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTL-E-CGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~-h-~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      |+++++|.|..|++.|.....|..|++. | .+ +++|.|..|++.|...+.|..|++.+++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~-~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN-VKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSS-CCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCC-CcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            8899999999999999999999999998 6 47 8999999999999999999999999886

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.9e-15  Score=79.63  Aligned_cols=68  Identities=22%  Similarity=0.393  Sum_probs=59.5

Q ss_pred             cCCCCccccCCCCCCceecC--cchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          10 FNLPPHTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        10 ~~l~~h~~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      ..+..|....++++++|.|.  .|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG-QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC-CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC-CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45566777779999999997  699999999999999999999 999999999999999999999998764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=4.2e-16  Score=86.64  Aligned_cols=67  Identities=19%  Similarity=0.229  Sum_probs=56.5

Q ss_pred             CCCccccCCCCCCceecCcchhhc-CCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHH-HHHhcCCCC
Q psy7447          12 LPPHTLFNPLLQFRYTCDSCGKVY-KLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTH-VAIKHQGPE   82 (114)
Q Consensus        12 l~~h~~~~h~~~k~~~C~~C~~~f-~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h-~~~~~~~~p   82 (114)
                      +..|++. +.++++|.|..|++.| .....|..|++.| + +++|.|..|++.|.....|..| +++|++ +|
T Consensus        22 ~~~~~~~-~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~-~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~-~p   90 (96)
T 2ctd_A           22 EEQWYLE-IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K-QEMFTCHHCGKQLRSLAGMKYHVMANHNS-LP   90 (96)
T ss_dssp             HHHHHHH-HHHTSCEECTTTCSCEESSHHHHHHHHHHH-C-CCCCCCSSSCCCCSSHHHHHHHHHHHTCC-CS
T ss_pred             HHHHHHH-hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C-CCCeECCCCCCeeCCHHHHHHHhHHhcCC-CC
Confidence            3445555 6778899999999999 8999999999999 8 8999999999999999999999 777764 45

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.57  E-value=3.5e-15  Score=74.89  Aligned_cols=57  Identities=26%  Similarity=0.512  Sum_probs=53.9

Q ss_pred             ceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      ||.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|+++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kk   57 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTD-VRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK   57 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS-CCCEECSSSSCEESSHHHHHHHHHSSSSCCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCC-CCCccCCCCCchhcCHHHHHHHHHHhcccCC
Confidence            68999999999999999999999999 9999999999999999999999999988763

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=9.1e-16  Score=78.22  Aligned_cols=54  Identities=13%  Similarity=0.056  Sum_probs=48.6

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCcccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSI  106 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~~~~  106 (114)
                      ++||.|..|++.|...+.|..|+++|+|++| |.|..||+.|........|...+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~C~k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRP-RSCPECGKCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCC-EECTTTCCEESSHHHHHHHGGGG
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcC-eECCCCCCCcCCHHHHHHHhCcc
Confidence            7899999999999999999999999999999 99999999999887766665443

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=1.9e-14  Score=76.66  Aligned_cols=63  Identities=21%  Similarity=0.291  Sum_probs=55.9

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC--CCCCeeCCCCCcccCCchHHHHHHHHhc-CCCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG--KEPRYQCPHCPYRGKQKVHLKTHVAIKH-QGPE   82 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~--~~k~~~C~~c~~~~~~~~~l~~h~~~~~-~~~p   82 (114)
                      |+++++|.|..|++.|.....|..|++.|.+  .+++|.|..|++.|.....|..|++.++ ++.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            7899999999999999999999999999983  1789999999999999999999996555 4444

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.55  E-value=3.8e-15  Score=85.79  Aligned_cols=77  Identities=14%  Similarity=0.237  Sum_probs=68.3

Q ss_pred             CCceecC--cchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC--CCcccccccc
Q psy7447          23 QFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH--QGPEMLSIKH   98 (114)
Q Consensus        23 ~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~--C~~~f~~~~~   98 (114)
                      .++|.|.  .|++.|.....|..|++.| + .++|.|..|++.|.....|..|++.|+++++ |.|..  |++.|.....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-G-PRVHVCAECGKAFVESSKLKRHQLVHTGEKP-FQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-S-CCCEECTTTCCEESSHHHHHHHGGGTSCCCC-EECCSTTCCCEESCHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-C-CCCeECCCCCchhCCHHHHHHHHHHcCCCCC-eeCCCCCCcCccCCHHH
Confidence            5789999  8999999999999999999 7 8999999999999999999999999999998 99986  9999987655


Q ss_pred             cCCC
Q psy7447          99 QGPE  102 (114)
Q Consensus        99 ~~~~  102 (114)
                      ...|
T Consensus        80 l~~H   83 (124)
T 1ubd_C           80 LRTH   83 (124)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4444

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.55  E-value=6.6e-15  Score=79.33  Aligned_cols=70  Identities=26%  Similarity=0.432  Sum_probs=64.7

Q ss_pred             ceec--CcchhhcCCchHHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHHHHhcCCCCcccccC---CCccccccc
Q psy7447          25 RYTC--DSCGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVKH---QGPEMLSIK   97 (114)
Q Consensus        25 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~~~~~p~~~C~~---C~~~f~~~~   97 (114)
                      ||.|  ..|++.|.....|..|++.|.+ +++|.|..  |++.|.....|..|+++|++    |.|..   |++.|....
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT-TCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC-CCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHH
Confidence            6889  9999999999999999999999 99999988  99999999999999999998    89999   999998765


Q ss_pred             cc
Q psy7447          98 HQ   99 (114)
Q Consensus        98 ~~   99 (114)
                      ..
T Consensus        76 ~l   77 (85)
T 2j7j_A           76 LY   77 (85)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.54  E-value=3.6e-15  Score=82.16  Aligned_cols=73  Identities=23%  Similarity=0.362  Sum_probs=65.3

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCC--CCeeCCCCCcccCCchHHHHHHH-HhcCC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKE--PRYQCPHCPYRGKQKVHLKTHVA-IKHQG   80 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~--k~~~C~~c~~~~~~~~~l~~h~~-~~~~~   80 (114)
                      +.+...|..|+++ |.++++|.|..|++.|.....|..|++.|.+ .  ++|.|..|++.|.....|..|++ .|.++
T Consensus        17 f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           17 FRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG-SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             ESSSHHHHHHHHH-SCSSCSEECSSSCCEESCHHHHHHHHHHHCC-CCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             cCChHHHHHHHHh-cCCCCCCcCCCCCCccCCHHHHHHHHHHhcC-CCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            4456678889998 9999999999999999999999999999998 6  89999999999999999999997 55543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.54  E-value=2.4e-15  Score=83.54  Aligned_cols=72  Identities=21%  Similarity=0.302  Sum_probs=65.7

Q ss_pred             ccCccCCCCccccCCCCCCceecC--cchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +.+...|..|+++ |.++++|.|.  .|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|++
T Consensus        27 f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           27 YTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG-AKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             ESCHHHHHHHHHH-HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS-CCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             ccCHHHHHHHHHH-hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC-CCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            3456678889988 9999999996  699999999999999999999 9999999999999999999999999874

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=2.3e-15  Score=85.10  Aligned_cols=73  Identities=25%  Similarity=0.377  Sum_probs=66.9

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +.+...|..|++. |.++++|.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|++.++..
T Consensus        19 f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           19 FTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG-IKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             ESSHHHHHHHHHH-HSCCCSEECTTTSCEESSSHHHHHHHTTTCC-CCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHH-cCCCcCccCCCCCcccCCHHHHHHHHHHcCC-CCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence            3456678889998 8999999999999999999999999999999 99999999999999999999999998753

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.51  E-value=4.3e-15  Score=80.86  Aligned_cols=71  Identities=24%  Similarity=0.367  Sum_probs=64.6

Q ss_pred             ccCccCCCCccccCCCCCCceecC--cchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhc
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      +.+...|..|+++ |.++++|.|.  .|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+++|.
T Consensus        17 f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           17 YTKSSHLKAHLRT-HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG-HRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             ESSHHHHHHHHTT-SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHC-CCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CCCHHHHHHHHHh-cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCC-CCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            3456678889998 9999999997  699999999999999999999 999999999999999999999998873

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=8.4e-16  Score=86.62  Aligned_cols=76  Identities=14%  Similarity=0.202  Sum_probs=66.7

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHH-HhcCCCCcc
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPEML   84 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~-~~~~~~p~~   84 (114)
                      +.+...|..|+++ |  .++|.|..|++.|.....|..|++ |.+ +++|.|..|++.|.....|..|++ +|.++++ |
T Consensus        26 f~~~~~l~~H~~~-H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~-~   99 (107)
T 1wjp_A           26 LSSLLEQGSHERL-C--RNAAVCPYCSLRFFSPELKQEHES-KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNM-A   99 (107)
T ss_dssp             CSSHHHHHHHHHH-H--HHSBCCTTTCCCBSSHHHHHHHHH-HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSCCCCC-C
T ss_pred             cCCHHHHHHHHHH-C--CCCccCCCCCCccCCHHHHHHHHH-cCC-CCCccCccccchhCCHHHHHHHHHHHcCCCCC-C
Confidence            4455677888888 6  479999999999999999999996 999 999999999999999999999997 7777777 8


Q ss_pred             ccc
Q psy7447          85 SVK   87 (114)
Q Consensus        85 ~C~   87 (114)
                      .|.
T Consensus       100 ~~~  102 (107)
T 1wjp_A          100 PTS  102 (107)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            765

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.50  E-value=4.4e-14  Score=77.78  Aligned_cols=62  Identities=21%  Similarity=0.344  Sum_probs=57.6

Q ss_pred             CceecCcchhhcCCchHHHHHHHH-hcCCCCC--------eeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTL-ECGKEPR--------YQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~-h~~~~k~--------~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      ..+.|..|++.|.....|..|++. |.+ .++        |.|..|++.|.....|..|+++|++++| |.|.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~-~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVG-GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS-GPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTC-CTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC-CSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccC-CCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCC
Confidence            457799999999999999999998 888 777        8999999999999999999999999998 9986

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=3.2e-14  Score=72.05  Aligned_cols=56  Identities=21%  Similarity=0.433  Sum_probs=51.1

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHH-HHhcCC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHV-AIKHQG   80 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~-~~~~~~   80 (114)
                      +||.|..|++.|.....|..|++.|.+ +++|.|..|++.|.....|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS-SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCC-CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            579999999999999999999999999 99999999999999999999997 566554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.4e-13  Score=65.29  Aligned_cols=45  Identities=18%  Similarity=0.183  Sum_probs=32.3

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSS-GSGERPYGCNECGKNFGRHSHLIEHLKRHFR-EKSSGPSSG   46 (46)
T ss_dssp             CCCCC-CSCCCCEECSSSCCEESSHHHHHHHHHHHHS-TTSSCCSCC
T ss_pred             CCCCC-CCCCCCEEccccCcccCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777655

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.9e-13  Score=70.64  Aligned_cols=60  Identities=17%  Similarity=0.289  Sum_probs=54.3

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC-CCCcccCCchHHHHHHHHhcCCCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP-HCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~-~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      .-++++|.|..|++.|. ...|..|++. .+ +++|.|. .|++.|...+.|..|+++|....+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~-~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CP-RLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CS-SSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cC-CcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            34678999999999999 9999999998 88 9999999 999999999999999999876554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.40  E-value=4.2e-13  Score=64.43  Aligned_cols=44  Identities=20%  Similarity=0.264  Sum_probs=28.3

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ely_A            3 SGSS-GTGEKPFKCVECGKGFSRRSALNVHHKLHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCC-CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC-CSSCSCCCC
T ss_pred             CCCC-CCCCCCcccCccCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            5555 6666666666666666666666666666666 666666554

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=3.6e-13  Score=64.59  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=27.7

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emm_A            3 SGSS-GTGERPHKCNECGKSFIQSAHLIQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSC-SSCCCSEECSSSCCEESSHHHHHHHHHHHSC-CCTTSSSCC
T ss_pred             CcCC-cCCCCCeeCCCCChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            5555 6666666666666666666666666666666 666666554

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=5.5e-13  Score=73.94  Aligned_cols=66  Identities=20%  Similarity=0.221  Sum_probs=58.6

Q ss_pred             hcCCchHHHHHHHHhcCCCCCeeCCCCCccc-CCchHHHHHHHHhcCCCCcccccCCCcccccccccCCC
Q psy7447          34 VYKLKRSLYRHRTLECGKEPRYQCPHCPYRG-KQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPE  102 (114)
Q Consensus        34 ~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~-~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~  102 (114)
                      .+.....+..|++.+.+ .++|.|..|++.| .....|..|+++| +++| |.|..|++.|........|
T Consensus        15 ~~~~~~~~~~~~~~~~~-~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~-~~C~~Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVD-KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM-FTCHHCGKQLRSLAGMKYH   81 (96)
T ss_dssp             SSCTTCHHHHHHHHHHH-TSCEECTTTCSCEESSHHHHHHHHHHH-CCCC-CCCSSSCCCCSSHHHHHHH
T ss_pred             CCCCchHHHHHHHHhcC-CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC-eECCCCCCeeCCHHHHHHH
Confidence            45667788899999999 9999999999999 9999999999999 8888 9999999999987665555

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.1e-13  Score=64.43  Aligned_cols=45  Identities=16%  Similarity=0.323  Sum_probs=28.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSS-GTGEKPYICAECGKAFTIRSNLIKHQKIHTK-QKPSGPSSG   46 (46)
T ss_dssp             CSSCT-TSSCCSEECSSSCCEESSHHHHHHHHHHTSC-CCCSSCSCC
T ss_pred             CcccC-CCCCcCeECCCCChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35555 6666666666666666666666666666666 666666544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.1e-13  Score=64.41  Aligned_cols=45  Identities=20%  Similarity=0.338  Sum_probs=30.8

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSS-GTGERPYICTVCGKAFTDRSNLIKHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCS-CSCCCSEECTTTCCEESSHHHHHHHHHHHHC-SSCSSSCCC
T ss_pred             CCCCC-CCCCCCcCCCCCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            35566 6677777777777777777777777777776 666766654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=4.4e-13  Score=63.73  Aligned_cols=44  Identities=16%  Similarity=0.162  Sum_probs=26.4

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         1 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   44 (44)
T 2emx_A            1 GSSG-SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE-EKPSGPSSG   44 (44)
T ss_dssp             CCCC-CSSCCCEECSSSSCEESSHHHHHHHHHHHTS-SCSCSCCCC
T ss_pred             CCCC-cCCCcCccCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            3444 5666666666666666666666666666666 566665544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.3e-13  Score=64.35  Aligned_cols=45  Identities=22%  Similarity=0.324  Sum_probs=31.1

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSS-GTGVKPYMCNECGKAFSVYSSLTTHQVIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSC-SSCCCSEECSSSCCEESCHHHHHHHHHHHHC-CSCCSCCCC
T ss_pred             Ccccc-cCCCcCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35665 6677777777777777777777777777776 667776654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.39  E-value=4.4e-14  Score=81.93  Aligned_cols=76  Identities=18%  Similarity=0.143  Sum_probs=56.9

Q ss_pred             CCCceecCcchhhcC------CchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccc
Q psy7447          22 LQFRYTCDSCGKVYK------LKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLS   95 (114)
Q Consensus        22 ~~k~~~C~~C~~~f~------~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~   95 (114)
                      .++.+.|..|.+.|.      ....|..|+ .|.+ +++|.|..|++.|.....|..|+++|  ++| |.|..|++.|..
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~-~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~-~~C~~C~k~f~~  112 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKA-ISQFVCPLCLMPFSSSVSLKQHIRYT--EHT-KVCPVCKKEFTS  112 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHH-HCSEECTTTCCEESSHHHHHHHHHHT--CCC-CBCTTTCCBCSS
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCC-CCCeECCCCCcccCCHhHHHHHHHHC--CCC-CCCCCCCcccCC
Confidence            456677877776665      445565565 5777 88899999999998888888888887  666 899999988887


Q ss_pred             ccccCCC
Q psy7447          96 IKHQGPE  102 (114)
Q Consensus        96 ~~~~~~~  102 (114)
                      ......|
T Consensus       113 ~~~l~~H  119 (129)
T 2wbt_A          113 TDSALDH  119 (129)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6554443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.5e-13  Score=64.29  Aligned_cols=45  Identities=22%  Similarity=0.307  Sum_probs=29.9

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSS-GTGENPYECHECGKAFSRKYQLISHQRTHAG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CCSSCCEECSSSCCEESSHHHHHHHHHHHTT-SCCSCSSCC
T ss_pred             CCCCC-CCCCcCcCCCCCCcccCcHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35555 6666777777777777666666666666666 666666654

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5.5e-13  Score=63.91  Aligned_cols=45  Identities=22%  Similarity=0.300  Sum_probs=30.3

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSS-GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG-ERHSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC-CSSCCSCCC
T ss_pred             CCCCC-CCCCCCccCCccChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            35565 6666777777777777766667777766666 666666654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.2e-13  Score=64.37  Aligned_cols=45  Identities=27%  Similarity=0.404  Sum_probs=32.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSS-GTGKKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSC-CCCCSCCCC
T ss_pred             CCCcC-CCCCcCeECCCCCCeeCCHHHHHHHhhhcCC-CCCCCCCCC
Confidence            35666 7777777777777777777777777777777 777777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=4.5e-13  Score=64.28  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=30.4

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSS-GTGEKPYECSICGKSFTKKSQLHVHQQIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSSSC-SSCCCSEECSSSCCEESSHHHHHHHHHTTSS-CCSCCSCCC
T ss_pred             CCCCC-CCCCcCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            45565 6667777777777777777777777776666 666666654

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.39  E-value=5e-13  Score=64.15  Aligned_cols=45  Identities=20%  Similarity=0.325  Sum_probs=28.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|+.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSS-GTGEKPYECKECGKAFSQTTHLIQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS-CCCSSCCCC
T ss_pred             CCCCc-cCCCCceECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35555 6666666666666666666666666666666 666666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.39  E-value=4.4e-13  Score=64.31  Aligned_cols=45  Identities=24%  Similarity=0.409  Sum_probs=32.0

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSS-GTGEKRYKCNECGKVFSRNSQLSQHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSCSS-CTTSCCEECSSSCCEESSHHHHHHHHTGGGC-CCCCSSSCC
T ss_pred             CCccC-CCCCcCcCCCCCcchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            35666 7777777777777777777777777777777 777777654

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=5e-13  Score=64.07  Aligned_cols=45  Identities=27%  Similarity=0.396  Sum_probs=30.3

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSS-GSGEKPYVCDYCGKAFGLSAELVRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCT-TCCCCSEECSSSCCEESSHHHHHHHHGGGCC-CSCCSSCCC
T ss_pred             CCCCC-CCCCCCeECCCCChhhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            45566 6666777777777777776777777766666 666666654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.6e-13  Score=64.25  Aligned_cols=45  Identities=20%  Similarity=0.323  Sum_probs=31.2

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSS-GTGEKPYECSVCGKAFSHRQSLSVHQRIHSG-KKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSCCSEECSSSCCEESSHHHHHHHHGGGSS-CCCSCSSCC
T ss_pred             CccCC-cCCCCCeeCCCcCCccCCHHHHHHHHHHhcC-CCCCCCCCC
Confidence            35666 6777777777777777777777777777776 667766654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.9e-13  Score=64.15  Aligned_cols=45  Identities=20%  Similarity=0.250  Sum_probs=29.0

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSS-GTGEKPFKCDICGKSFCGRSRLNRHSMVHTA-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTC-CCSSSCCCC
T ss_pred             CCCCC-CCCCCCcCCCcCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35555 6666666666666666666666666666666 666666554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.4e-13  Score=64.03  Aligned_cols=45  Identities=22%  Similarity=0.356  Sum_probs=33.5

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|.+|
T Consensus         2 ~h~~~-h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSS-GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG-EKTSGPSSG   46 (46)
T ss_dssp             CCCSC-CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGS-CCCCCSCCC
T ss_pred             CCCCC-CCCCCCeeCcccCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            35666 7777777777777777777777777777777 777777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.4e-13  Score=64.26  Aligned_cols=45  Identities=22%  Similarity=0.327  Sum_probs=29.6

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSS-GTGEKLYNCKECGKSFSRAPCLLKHERLHSG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS-SSCCCCCCC
T ss_pred             CCccc-CCCCCCeECCCCCCccCchHHHHHHHHhcCC-CCCCCCCCC
Confidence            35555 6666667776676666666666666666666 666666654

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.8e-13  Score=64.58  Aligned_cols=45  Identities=20%  Similarity=0.301  Sum_probs=33.3

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|++|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSS-GTGGKHFECTECGKAFTRKSTLSMHQKIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSS-SSSSCCEECSSSCCEESCHHHHHHHGGGTSC-SSCSCCCCC
T ss_pred             ccccc-cCCCCCeECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            36666 7777777777777777777777777777777 777777655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=3.9e-13  Score=64.52  Aligned_cols=45  Identities=20%  Similarity=0.293  Sum_probs=31.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      +|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSS-GSSTKSHQCHECGRGFTLKSHLNQHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCSCSEECSSSCCEESSHHHHHHHHTTTSC-SCCSSCCCC
T ss_pred             CCcCC-CCCCCCeECCcCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777776 677776655

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.8e-13  Score=64.17  Aligned_cols=45  Identities=22%  Similarity=0.330  Sum_probs=29.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|++|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSS-GSGEKPYKCNECGKVFTQNSHLTNHWRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SSSSCSEECSSSCCEESSHHHHHHHHHHHSS-SSCSSCCCC
T ss_pred             CCccc-CCCCCCEeCCcCCCccCCHHHHHHHHHHHCC-CCCCCCCCC
Confidence            35555 6666677777777666666666666666666 666666654

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.9e-13  Score=64.12  Aligned_cols=45  Identities=20%  Similarity=0.316  Sum_probs=31.3

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSS-GTGEKPYKCNECGKVFTQNSHLANHQRIHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCSSC-CCCCCSSEETTTTEECSSHHHHHHHHGGGSC-CCSCSSCCC
T ss_pred             CCCCC-CCCCCCeECCCcChhhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35565 6777777777777777777777777777776 677776655

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.4e-13  Score=64.31  Aligned_cols=44  Identities=20%  Similarity=0.280  Sum_probs=29.5

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epz_A            3 SGSS-GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSS-CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTT-CCCCSSCCC
T ss_pred             CCCC-cCCCCCeECCCCCceeCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            5555 6666777777777777766666667666666 666666654

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=6e-13  Score=63.82  Aligned_cols=44  Identities=20%  Similarity=0.296  Sum_probs=28.0

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+.|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSS-GSGEKPYKCSECGKAFHRHTHLNEHRRIHTG-YRPSGPSSG   46 (46)
T ss_dssp             CCCC-SCCCCSEECSSSCCEESSHHHHHHHHHHHTC-CCSSCSSCC
T ss_pred             Cccc-cCCCcCeECCCCCCeeCChHHHHHHHHHcCC-CCCCCCCCC
Confidence            5555 6666666666666666666666666666666 666666554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.3e-13  Score=64.33  Aligned_cols=45  Identities=24%  Similarity=0.395  Sum_probs=30.8

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSS-GTGEKPYKCNECGKVFRHNSYLSRHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCSS-CCCSSSEECSSSCCEESSHHHHHHHHTTTCC-CCCCSCCCC
T ss_pred             CcccC-CCCCCCeECCCCCchhCChHHHHHHHhhcCC-CCCCCCCCC
Confidence            35566 6677777777777777777777777777766 666766654

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=5.2e-13  Score=64.03  Aligned_cols=45  Identities=24%  Similarity=0.372  Sum_probs=31.0

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSS-GTGEKPYKCNECGKVFTQNSHLARHRRVHTG-GKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCCSSEECSSSCCEESSSHHHHHHTHHHHS-CCCSCSCCC
T ss_pred             CcCcC-CCCCCCeECCcCCchhCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            35565 6677777777777777777777777777776 667776654

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.37  E-value=4.9e-13  Score=64.15  Aligned_cols=45  Identities=16%  Similarity=0.234  Sum_probs=32.0

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSS-GMGEKTWKCRECDMCFSQASSLRLHQNVHVG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS-SSCSCSSCC
T ss_pred             CCcCc-cCCCcCeECCCCCcccCCHHHHHHHHHHcCC-CCCcCCCCC
Confidence            46666 7777777777777777777777777777777 777777655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=6.1e-13  Score=63.76  Aligned_cols=45  Identities=16%  Similarity=0.186  Sum_probs=29.1

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSS-GTGEKPCKCTECGKAFCWKSQLIMHQRTHVD-DKHSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCCCSEECSSSCCEESSSHHHHHHHHHCCS-CCCSCCCCC
T ss_pred             cCccc-CCCCCCeeCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            35555 6666666666666666666666666666666 666666554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.37  E-value=4.4e-13  Score=64.28  Aligned_cols=45  Identities=20%  Similarity=0.220  Sum_probs=32.5

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSS-GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG-VKPSGPSSG   46 (46)
T ss_dssp             CCCCC-SCCCCSEECSSSSCEESSHHHHHHHGGGSSS-CCCSCCTTC
T ss_pred             ccccC-CCCCCceECCCCCchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777655

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.37  E-value=5.7e-13  Score=63.88  Aligned_cols=45  Identities=20%  Similarity=0.364  Sum_probs=32.9

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSS-GTGEKPYNCKECGKSFRWASCLLKHQRVHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSCCS-CCCCCSEECSSSCCEESSHHHHHHHGGGGTS-CCCCSTTCC
T ss_pred             CCCCC-CCCCcCeECCccccccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=5.5e-13  Score=63.96  Aligned_cols=45  Identities=24%  Similarity=0.403  Sum_probs=31.9

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|.+|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSS-GTGEKPYKCEECGKGFICRRDLYTHHMVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCS-SSCCCSEECSSSCCEESCHHHHHHHGGGGTT-CCCSSTTCC
T ss_pred             CCCCC-CCCCcCccCCCccchhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            35566 7777777777777777777777777777777 777777655

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=6.8e-13  Score=63.70  Aligned_cols=44  Identities=20%  Similarity=0.250  Sum_probs=29.3

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         3 h~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSS-GTGEKPYKCMECGKAFGDNSSCTQHQRLHTG-QRPSGPSSG   46 (46)
T ss_dssp             SCCC-CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS-CCCCCCCCC
T ss_pred             CCcC-CCCCCCcCCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            4555 6666677777777777666666666666666 666666654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.37  E-value=2.8e-13  Score=65.05  Aligned_cols=44  Identities=14%  Similarity=0.232  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ely_A            3 SGSSGTG-EKPFKCVECGKGFSRRSALNVHHKLHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS-CSCCCC
T ss_pred             CCCCCCC-CCCcccCccCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=6e-13  Score=63.83  Aligned_cols=45  Identities=18%  Similarity=0.286  Sum_probs=32.6

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSS-GSGEKPFKCEECGKRFTQNSQLHSHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSTTC-CCCCCSEEETTTTEEESSHHHHHHHGGGGSC-CCCSCCCCC
T ss_pred             CcccC-CCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777655

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.5e-13  Score=63.91  Aligned_cols=45  Identities=18%  Similarity=0.251  Sum_probs=30.4

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSS-GTGEKPHECRECGKSFSFNSQLIVHQRIHTG-ENPSGPSSG   46 (46)
T ss_dssp             CCCCS-CCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT-SCCSCCCCC
T ss_pred             CCccc-cCCCCCeeCCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            35565 6667777777777777777777777776666 666666654

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=2.6e-13  Score=65.08  Aligned_cols=44  Identities=20%  Similarity=0.209  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|++ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emm_A            3 SGSSGTG-ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSCSSC-CCSEECSSSCCEESSHHHHHHHHHHHSCCCT-TSSSCC
T ss_pred             CcCCcCC-CCCeeCCCCChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.1e-13  Score=64.03  Aligned_cols=45  Identities=22%  Similarity=0.361  Sum_probs=30.6

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSS-GTGEKPYKCNECGKAFSQTSKLARHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CSSCC-CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT-CSCCCSCCC
T ss_pred             CCCcC-CCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCCCC
Confidence            35565 6677777777777777777777777777766 666666654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.4e-13  Score=63.97  Aligned_cols=44  Identities=25%  Similarity=0.388  Sum_probs=28.9

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|.+|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSS-GTGEKPYKCHECGKVFRRNSHLARHQLIHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCC-TTCCCCEECTTTCCEESSHHHHHHHHTTTCC-CCCSCCSCC
T ss_pred             CCcC-CCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            5555 6666666666666666666666666666666 666666654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.6e-13  Score=63.67  Aligned_cols=45  Identities=22%  Similarity=0.287  Sum_probs=29.6

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         2 ~h~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSS-GSGEKPYGCNECGKTFSQKSILSAHQRTHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCSCC-CCSSCCEEETTTTEEESSHHHHHHHHHHHSS-CCCSSSCCC
T ss_pred             CCCCc-cCCCcCeECCCCCcccCchHHHHHHHHHcCC-CCCCCCCCC
Confidence            35555 6666667777777666666666666666666 666666654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=8.5e-13  Score=63.32  Aligned_cols=44  Identities=25%  Similarity=0.261  Sum_probs=30.3

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         3 h~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2em8_A            3 SGSS-GSGEKPYKCVECGKGYKRRLDLDFHQRVHTG-EKLSGPSSG   46 (46)
T ss_dssp             CCCC-CCSCCSEECSSSCCEESSHHHHHHHHHHHHC-CCCCCSCCC
T ss_pred             CCCC-CCCCCCeECcccCchhCCHHHHHHHHHHHcC-CCCCCCCCC
Confidence            5555 6677777777777777777777777777776 666766654

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2.6e-13  Score=64.53  Aligned_cols=44  Identities=16%  Similarity=0.178  Sum_probs=40.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   44 (44)
T 2emx_A            1 GSSGSSG-EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP-SGPSSG   44 (44)
T ss_dssp             CCCCCSS-CCCEECSSSSCEESSHHHHHHHHHHHTSSCS-CSCCCC
T ss_pred             CCCCcCC-CcCccCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            4567888 9999999999999999999999999999998 999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.6e-13  Score=63.70  Aligned_cols=44  Identities=23%  Similarity=0.257  Sum_probs=28.7

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSS-GAGEKPYGCSECGKAFSSKSYLIIHMRTHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSC-SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC-SCSSCCCCC
T ss_pred             CCcC-cCCCCCcCCCccChhhCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            5555 6666666666666666666666666666666 666666554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=8.9e-13  Score=63.21  Aligned_cols=44  Identities=18%  Similarity=0.236  Sum_probs=28.4

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         3 H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2yso_A            3 SGSS-GSREKSHQCRECGEIFFQYVSLIEHQVLHMG-QKNSGPSSG   46 (46)
T ss_dssp             CSCC-SSCCCCEECTTTCCEESSHHHHHHHHHHHSC-CSCCCTTCC
T ss_pred             cccc-cCCCCCEEccccChhhCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            4555 6666666666666666666666666666666 666666554

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.36  E-value=3e-13  Score=64.95  Aligned_cols=44  Identities=20%  Similarity=0.297  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emk_A            3 SGSSGTG-EKPYECKECGKAFSQTTHLIQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC-SSCCCC
T ss_pred             CCCccCC-CCceECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=6.5e-13  Score=63.65  Aligned_cols=45  Identities=22%  Similarity=0.218  Sum_probs=30.8

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSS-GSGEKSHTCDECGKNFCYISALRIHQRVHMG-EKCSGPSSG   46 (46)
T ss_dssp             CCCCC-CCCCSSEECTTTCCEESSHHHHHHHHTTTCC-SCSSCCSCC
T ss_pred             Ccccc-CCCCCCeECCCcCcccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            35666 6677777777777777777777777777766 666766654

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=8.4e-13  Score=63.31  Aligned_cols=44  Identities=18%  Similarity=0.274  Sum_probs=28.6

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|..|
T Consensus         3 h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2enc_A            3 SGSS-GSGEKPFKCEECGKGFYTNSQCYSHQRSHSG-EKPSGPSSG   46 (46)
T ss_dssp             CSSC-CCCCCSEECSSSCCEESSHHHHHHHHHHSCC-SSCCSSCCC
T ss_pred             CCCC-CCCCCCcCCCCCCCcCCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            4555 6666666666666666666666666666666 666666554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.35  E-value=9e-13  Score=63.22  Aligned_cols=44  Identities=18%  Similarity=0.161  Sum_probs=28.4

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         3 h~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2el6_A            3 SGSS-GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR-EKPSGPSSG   46 (46)
T ss_dssp             SCCS-SCCCCSEECSSSSCEESSHHHHHHHHGGGCC-SSCCSCCCC
T ss_pred             CCCC-CCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            4555 6666666666666666666666666666666 666666554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=3.5e-14  Score=78.94  Aligned_cols=67  Identities=16%  Similarity=0.145  Sum_probs=57.4

Q ss_pred             cCCchHHHHHHHHhcCCCCCeeCCCCCcccC-CchHHHHHHHHhcC-CCCcccccCCCcccccccccCCCc
Q psy7447          35 YKLKRSLYRHRTLECGKEPRYQCPHCPYRGK-QKVHLKTHVAIKHQ-GPEMLSVKHQGPEMLSIKHQGPET  103 (114)
Q Consensus        35 f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~-~~~~l~~h~~~~~~-~~p~~~C~~C~~~f~~~~~~~~~~  103 (114)
                      +.....+..|++.|.+ .++|.|..|++.|. ....|..|+++|++ +++ |.|.+|++.|........|.
T Consensus         6 ~~~~~~~~~h~~~h~~-~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~-~~C~~C~k~F~~~~~L~~H~   74 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHE-RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA-LKCQHCRKQFKSKAGLNYHT   74 (98)
T ss_dssp             CCCCCSCSHHHHTTTT-TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH-HSCSSSCCCCSCHHHHHHHH
T ss_pred             CCCCCcHHHHHHHhcc-CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC-EECCCCCCccCCHHHHHHHH
Confidence            3444556789999999 99999999999999 99999999999998 777 99999999999776655544

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.9e-13  Score=64.96  Aligned_cols=44  Identities=18%  Similarity=0.178  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emp_A            3 SGSSGTG-VKPYMCNECGKAFSVYSSLTTHQVIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSCSSC-CCSEECSSSCCEESCHHHHHHHHHHHHCCSC-CSCCCC
T ss_pred             cccccCC-CcCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            6678888 9999999999999999999999999999998 999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.1e-13  Score=64.84  Aligned_cols=44  Identities=18%  Similarity=0.240  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2emy_A            3 SGSSGTG-ENPYECHECGKAFSRKYQLISHQRTHAGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCS-SCCEECSSSCCEESSHHHHHHHHHHHTTSCC-SCSSCC
T ss_pred             CCCCCCC-CcCcCCCCCCcccCcHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=4.2e-14  Score=80.47  Aligned_cols=79  Identities=18%  Similarity=0.064  Sum_probs=64.4

Q ss_pred             ccCccCCCCccccC-CCCCCc-eecCcchhhc--CCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447           6 RFSEFNLPPHTLFN-PLLQFR-YTCDSCGKVY--KLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus         6 ~~~~~~l~~h~~~~-h~~~k~-~~C~~C~~~f--~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +.+...|..|+++. |.+.++ +.|..|++.|  .....|..|++.|.+ +++|.|.+|++.|.....|..|++.++...
T Consensus        29 f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           29 YDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA-QKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             ESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             hcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCC-CcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            34556677787751 344454 4599999999  888999999999999 999999999999999999999999998766


Q ss_pred             Ccccc
Q psy7447          82 EMLSV   86 (114)
Q Consensus        82 p~~~C   86 (114)
                      . ..+
T Consensus       108 ~-~~~  111 (115)
T 2dmi_A          108 K-VSG  111 (115)
T ss_dssp             C-SCC
T ss_pred             c-CCC
Confidence            5 443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.1e-13  Score=64.07  Aligned_cols=45  Identities=20%  Similarity=0.318  Sum_probs=32.4

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSS-GTGEKPFKCGECGKSYNQRVHLTQHQRVHTG-EKPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSCCSEECTTTCCEESSSHHHHTTGGGGSS-CCSSCSCCC
T ss_pred             CCCCC-CCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            46666 7777777777777777777777777777777 777777655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.5e-13  Score=64.28  Aligned_cols=45  Identities=18%  Similarity=0.237  Sum_probs=41.7

Q ss_pred             HHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          43 RHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        43 ~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      .|++.|++ +++|.|..|++.|...+.|..|+++|++++| |.|+.|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTG-EKPYICAECGKAFTIRSNLIKHQKIHTKQKP-SGPSSG   46 (46)
T ss_dssp             CSSCTTSS-CCSEECSSSCCEESSHHHHHHHHHHTSCCCC-SSCSCC
T ss_pred             CcccCCCC-CcCeECCCCChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            36778889 9999999999999999999999999999998 999976

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3e-13  Score=64.96  Aligned_cols=45  Identities=18%  Similarity=0.264  Sum_probs=41.7

Q ss_pred             HHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          43 RHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        43 ~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      .|++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         2 ~H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSG-ERPYGCNECGKNFGRHSHLIEHLKRHFREKS-SGPSSG   46 (46)
T ss_dssp             CCCCCCSC-CCCEECSSSCCEESSHHHHHHHHHHHHSTTS-SCCSCC
T ss_pred             CCCCCCCC-CCCEEccccCcccCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            36678888 9999999999999999999999999999998 999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.9e-13  Score=64.48  Aligned_cols=44  Identities=20%  Similarity=0.304  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSG-EKPYKCSECGKAFHRHTHLNEHRRIHTGYRP-SGPSSG   46 (46)
T ss_dssp             CCCCSCC-CCSEECSSSCCEESSHHHHHHHHHHHTCCCS-SCSSCC
T ss_pred             CccccCC-CcCeECCCCCCeeCChHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3e-13  Score=64.90  Aligned_cols=44  Identities=16%  Similarity=0.197  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTG-EKLYNCKECGKSFSRAPCLLKHERLHSGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSC-CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC-CCCCCC
T ss_pred             CcccCCC-CCCeECCCCCCccCchHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.1e-13  Score=63.81  Aligned_cols=45  Identities=24%  Similarity=0.308  Sum_probs=31.5

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         2 ~H~~~-h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSS-GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG-ERPSGPSSG   46 (46)
T ss_dssp             CCCCC-CSSCCSEEETTTTEEESCHHHHHHHHTTSCS-CCSSCCSCC
T ss_pred             CCCcC-CCCCCCeECCCCCCccCCHHHHHHHHHhhCC-CCCCCCCCC
Confidence            35666 6777777777777777777777777777776 677776655

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.6e-13  Score=64.64  Aligned_cols=44  Identities=14%  Similarity=0.209  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTG-EKPFKCDICGKSFCGRSRLNRHSMVHTAEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSS-SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS-SSCCCC
T ss_pred             CCCCCCC-CCCcCCCcCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4e-13  Score=64.40  Aligned_cols=44  Identities=18%  Similarity=0.246  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eov_A            3 SGSSGTG-EKPYKCSDCGKSFTWKSRLRIHQKCHTGERH-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS-CCSCCC
T ss_pred             CCCCCCC-CCCccCCccChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.2e-13  Score=64.80  Aligned_cols=44  Identities=18%  Similarity=0.226  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emh_A            3 SGSSGTG-ERPYICTVCGKAFTDRSNLIKHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCSC-CCSEECTTTCCEESSHHHHHHHHHHHHCSSC-SSSCCC
T ss_pred             CCCCCCC-CCCcCCCCCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.7e-13  Score=65.08  Aligned_cols=44  Identities=18%  Similarity=0.258  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eml_A            3 SGSSGTG-EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-CCSEECSSSCCEESSHHHHHHHHGGGSSCCC-SCSSCC
T ss_pred             ccCCcCC-CCCeeCCCcCCccCCHHHHHHHHHHhcCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.8e-13  Score=64.56  Aligned_cols=44  Identities=23%  Similarity=0.304  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSG-EKPYKCNECGKVFTQNSHLTNHWRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSSS-SCSEECSSSCCEESSHHHHHHHHHHHSSSSC-SSCCCC
T ss_pred             CcccCCC-CCCEeCCcCCCccCCHHHHHHHHHHHCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.9e-13  Score=64.46  Aligned_cols=44  Identities=16%  Similarity=0.138  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epw_A            3 SGSSGTG-EKPCKCTECGKAFCWKSQLIMHQRTHVDDKH-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-CCSEECSSSCCEESSSHHHHHHHHHCCSCCC-SCCCCC
T ss_pred             CcccCCC-CCCeeCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.8e-13  Score=64.98  Aligned_cols=44  Identities=23%  Similarity=0.285  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTG-EKPYKCNECGKVFTQNSHLANHQRIHTGVKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCC-CCSSEETTTTEECSSHHHHHHHHGGGSCCCS-CSSCCC
T ss_pred             CCCCCCC-CCCeECCCcChhhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=9.7e-13  Score=63.07  Aligned_cols=44  Identities=20%  Similarity=0.391  Sum_probs=31.2

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH   59 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~   59 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|.+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSS-GTGEKPYRCAECGKAFTDRSNLFTHQKIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCSS-SSCCCSEECSSSCCEESSHHHHHHHHTTTTT-SCCCCTTC
T ss_pred             CCCCC-CCCCCCeECCCCCchhCCHHHHHHHHHHcCC-CCCCCCCC
Confidence            45666 7777777777777777777777777777777 67777664

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3e-13  Score=64.91  Aligned_cols=44  Identities=23%  Similarity=0.344  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|++ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTG-EKPYKCNECGKVFTQNSHLARHRRVHTGGKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-CSSEECSSSCCEESSSHHHHHHTHHHHSCCC-SCSCCC
T ss_pred             cCcCCCC-CCCeECCcCCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=3.1e-13  Score=64.84  Aligned_cols=44  Identities=16%  Similarity=0.238  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2epz_A            3 SGSSGTG-EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCC-CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC-CSSCCC
T ss_pred             CCCCcCC-CCCeECCCCCceeCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.2e-13  Score=64.37  Aligned_cols=44  Identities=20%  Similarity=0.289  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTG-EKPYECSICGKSFTKKSQLHVHQQIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSSCSSC-CCSEECSSSCCEESSHHHHHHHHHTTSSCCS-CCSCCC
T ss_pred             CCCCCCC-CcCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.4e-13  Score=64.29  Aligned_cols=44  Identities=18%  Similarity=0.182  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2eme_A            3 SGSSGSG-EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCTTCC-CCSEECSSSCCEESSHHHHHHHHGGGCCCSC-CSSCCC
T ss_pred             CCCCCCC-CCCeECCCCChhhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            6778888 9999999999999999999999999999998 999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.7e-13  Score=65.07  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ene_A            3 SGSSGTG-EKPYKCNECGKVFRHNSYLSRHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSCCC-SSSEECSSSCCEESSHHHHHHHHTTTCCCCC-CSCCCC
T ss_pred             cccCCCC-CCCeECCCCCchhCChHHHHHHHhhcCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=5.1e-13  Score=64.09  Aligned_cols=44  Identities=18%  Similarity=0.101  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2yso_A            3 SGSSGSR-EKSHQCRECGEIFFQYVSLIEHQVLHMGQKN-SGPSSG   46 (46)
T ss_dssp             CSCCSSC-CCCEECTTTCCEESSHHHHHHHHHHHSCCSC-CCTTCC
T ss_pred             cccccCC-CCCEEccccChhhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.8e-13  Score=65.01  Aligned_cols=44  Identities=20%  Similarity=0.285  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTG-KKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSC-CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC-CSCCCC
T ss_pred             CCcCCCC-CcCeECCCCCCeeCCHHHHHHHhhhcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.8e-13  Score=72.79  Aligned_cols=59  Identities=22%  Similarity=0.424  Sum_probs=52.7

Q ss_pred             ccCccCCCCccccCCCCCCceecCc--chhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGK   65 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~   65 (114)
                      +.+..+|..|++..|.++++|.|..  |++.|.....|..|++.|.+ +++|.|..|++.|.
T Consensus        19 f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           19 FSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICEFSGPSSG   79 (79)
T ss_dssp             ESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHT-SCCCSCCSSSCCCC
T ss_pred             cCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCC-CCCeeCCCCCCCCC
Confidence            3456678889983499999999999  99999999999999999999 99999999999873

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.1e-12  Score=63.03  Aligned_cols=45  Identities=24%  Similarity=0.286  Sum_probs=30.4

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHH-HhcCCCCCeeCCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRT-LECGKEPRYQCPHC   60 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~c   60 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++ .|.+ +++|.|..|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSS-GTGKKPYECIECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG   47 (47)
T ss_dssp             CCCCC-CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred             ccccc-cCCCCCEECCccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence            35566 666777777777777777777777776 6666 666666654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.33  E-value=1.1e-12  Score=65.11  Aligned_cols=42  Identities=14%  Similarity=0.169  Sum_probs=21.4

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHH-HhcCCCCcccccCCCcccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~-~~~~~~p~~~C~~C~~~f~   94 (114)
                      +++|.|..|++.|.....|..|++ +|++++| |.|..|++.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~-~~C~~C~k~F~   52 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQVWVSGPS   52 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSSSSCCSSC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCC-ccCCCCCCCCC
Confidence            444555555555555555555544 4444444 55555555544

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.3e-13  Score=64.41  Aligned_cols=44  Identities=14%  Similarity=0.179  Sum_probs=41.0

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTG-EKPYKCMECGKAFGDNSSCTQHQRLHTGQRP-SGPSSG   46 (46)
T ss_dssp             SCCCCSS-CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC-CCCCCC
T ss_pred             CCcCCCC-CCCcCCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.5e-13  Score=64.70  Aligned_cols=44  Identities=18%  Similarity=0.218  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAG-EKPYGCSECGKAFSSKSYLIIHMRTHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCSSC-CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS-SCCCCC
T ss_pred             CCcCcCC-CCCcCCCccChhhCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.33  E-value=2.2e-12  Score=67.52  Aligned_cols=57  Identities=25%  Similarity=0.402  Sum_probs=51.9

Q ss_pred             CCCCCceecCc--chhhcCCchHHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHHHHh
Q psy7447          20 PLLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        20 h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~   77 (114)
                      +...++|.|..  |++.|.....|..|++.|.+ +++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG-EKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSS-SCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCC-CCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            67789999988  99999999999999999999 99999965  999999999999998754

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.33  E-value=3.8e-13  Score=64.53  Aligned_cols=44  Identities=20%  Similarity=0.302  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2ema_A            3 SGSSGTG-EKRYKCNECGKVFSRNSQLSQHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SCSSCTT-SCCEECSSSCCEESSHHHHHHHHTGGGCCCC-CSSSCC
T ss_pred             CccCCCC-CcCcCCCCCcchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4.6e-13  Score=64.24  Aligned_cols=44  Identities=11%  Similarity=0.135  Sum_probs=41.0

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2enc_A            3 SGSSGSG-EKPFKCEECGKGFYTNSQCYSHQRSHSGEKP-SGPSSG   46 (46)
T ss_dssp             CSSCCCC-CCSEECSSSCCEESSHHHHHHHHHHSCCSSC-CSSCCC
T ss_pred             CCCCCCC-CCCcCCCCCCCcCCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.33  E-value=3e-13  Score=64.88  Aligned_cols=44  Identities=16%  Similarity=0.234  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em0_A            3 SGSSGMG-EKTWKCRECDMCFSQASSLRLHQNVHVGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCSCC-CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC-SCSSCC
T ss_pred             CcCccCC-CcCeECCCCCcccCCHHHHHHHHHHcCCCCC-cCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.5e-13  Score=64.61  Aligned_cols=44  Identities=16%  Similarity=0.148  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2eop_A            3 SGSSGTG-EKPHECRECGKSFSFNSQLIVHQRIHTGENP-SGPSSG   46 (46)
T ss_dssp             CCCSCCC-CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC-SCCCCC
T ss_pred             CccccCC-CCCeeCCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.7e-13  Score=64.56  Aligned_cols=44  Identities=20%  Similarity=0.303  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTG-EKPYKCHECGKVFRRNSHLARHQLIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCTTC-CCCEECTTTCCEESSHHHHHHHHTTTCCCCC-SCCSCC
T ss_pred             CCcCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.9e-12  Score=62.06  Aligned_cols=44  Identities=18%  Similarity=0.286  Sum_probs=30.0

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPH   59 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~   59 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|.+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~   45 (46)
T 2em2_A            2 SSGSS-GSGEKPFKCKECGKAFRQNIHLASHLRIHTG-EKPSGPSS   45 (46)
T ss_dssp             CCCCS-CCCCCSEECSSSCCEESSHHHHHHHHHHHCC-CCSSCSSC
T ss_pred             CCCCC-CCCCCCEECCcCCchhCCHHHHHHHHHHhCC-CCCCCCCC
Confidence            35555 6677777777777777777777777777766 66666654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=4.3e-13  Score=64.33  Aligned_cols=44  Identities=20%  Similarity=0.229  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 h~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en6_A            3 SGSSGSG-EKPYGCNECGKTFSQKSILSAHQRTHTGEKP-SGPSSG   46 (46)
T ss_dssp             CSCCCCS-SCCEEETTTTEEESSHHHHHHHHHHHSSCCC-SSSCCC
T ss_pred             CCCccCC-CcCeECCCCCcccCchHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.5e-13  Score=64.70  Aligned_cols=44  Identities=14%  Similarity=0.236  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2elz_A            3 SGSSGSV-EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT-SGPSSG   46 (46)
T ss_dssp             CCSCCCC-CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC-CCSCCC
T ss_pred             CCCCCCC-CCCeeCcccCchhCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.33  E-value=2.9e-13  Score=64.93  Aligned_cols=44  Identities=16%  Similarity=0.157  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2el4_A            3 SGSSGTG-VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP-SGPSSG   46 (46)
T ss_dssp             CCCCSCC-CCSEECSSSSCEESSHHHHHHHGGGSSSCCC-SCCTTC
T ss_pred             cccCCCC-CCceECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.9e-13  Score=65.01  Aligned_cols=44  Identities=16%  Similarity=0.240  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~c   46 (46)
T 2emf_A            3 SGSSGTG-GKHFECTECGKAFTRKSTLSMHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSSSS-SCCEECSSSCCEESCHHHHHHHGGGTSCSSC-SCCCCC
T ss_pred             cccccCC-CCCeECCCCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3.5e-13  Score=64.67  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2em7_A            3 SGSSGTG-EKPYKCEECGKGFICRRDLYTHHMVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSSSC-CCSEECSSSCCEESCHHHHHHHGGGGTTCCC-SSTTCC
T ss_pred             CCCCCCC-CcCccCCCccchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=3.4e-13  Score=64.72  Aligned_cols=44  Identities=18%  Similarity=0.172  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em5_A            3 SGSSGSS-TKSHQCHECGRGFTLKSHLNQHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-SCSEECSSSCCEESSHHHHHHHHTTTSCSCC-SSCCCC
T ss_pred             CcCCCCC-CCCeECCcCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.6e-13  Score=64.60  Aligned_cols=44  Identities=20%  Similarity=0.263  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTG-EKPYKCNECGKAFSQTSKLARHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             SSCCCSS-CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC-CCSCCC
T ss_pred             CCcCCCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.32  E-value=1.8e-12  Score=64.38  Aligned_cols=46  Identities=22%  Similarity=0.330  Sum_probs=43.4

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHH-HhcCCCCCeeCCCCCcccCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRT-LECGKEPRYQCPHCPYRGKQ   66 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~c~~~~~~   66 (114)
                      |+++++|.|..|++.|.....|..|++ .|.+ +++|.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCCCCC
Confidence            788999999999999999999999997 8999 999999999999976

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=6e-13  Score=63.85  Aligned_cols=44  Identities=18%  Similarity=0.288  Sum_probs=41.0

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em8_A            3 SGSSGSG-EKPYKCVECGKGYKRRLDLDFHQRVHTGEKL-SGPSSG   46 (46)
T ss_dssp             CCCCCCS-CCSEECSSSCCEESSHHHHHHHHHHHHCCCC-CCSCCC
T ss_pred             CCCCCCC-CCCeECcccCchhCCHHHHHHHHHHHcCCCC-CCCCCC
Confidence            4677888 9999999999999999999999999999998 999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.32  E-value=4.2e-13  Score=64.34  Aligned_cols=44  Identities=16%  Similarity=0.206  Sum_probs=41.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2em9_A            3 SGSSGTG-EKPYNCKECGKSFRWASCLLKHQRVHSGEKP-SGPSSG   46 (46)
T ss_dssp             SCCSCCC-CCSEECSSSCCEESSHHHHHHHGGGGTSCCC-CSTTCC
T ss_pred             CCCCCCC-CcCeECCccccccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            6678888 9999999999999999999999999999998 999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.32  E-value=5.7e-13  Score=63.94  Aligned_cols=44  Identities=16%  Similarity=0.267  Sum_probs=41.0

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 h~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2el6_A            3 SGSSGAG-VNPYKCSQCEKSFSGKLRLLVHQRMHTREKP-SGPSSG   46 (46)
T ss_dssp             SCCSSCC-CCSEECSSSSCEESSHHHHHHHHGGGCCSSC-CSCCCC
T ss_pred             CCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.32  E-value=2.4e-13  Score=73.06  Aligned_cols=68  Identities=31%  Similarity=0.534  Sum_probs=61.2

Q ss_pred             ccCccCCCCccccCCCCCCceecCc--chhhcCCchHHHHHHHHhcCCCCCeeCCC---CCcccCCchHHHHHHHHhc
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCPH---CPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~~---c~~~~~~~~~l~~h~~~~~   78 (114)
                      +.+...|..|+++ |.++++|.|..  |++.|.....|..|++.|.+    +.|..   |++.|.....|..|+++|+
T Consensus        13 f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           13 FKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ESSHHHHHHHHHH-HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHH-hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            3456678889988 99999999988  99999999999999999986    89999   9999999999999998874

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=4.4e-13  Score=64.26  Aligned_cols=44  Identities=14%  Similarity=0.099  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2en8_A            3 SGSSGSG-EKSHTCDECGKNFCYISALRIHQRVHMGEKC-SGPSSG   46 (46)
T ss_dssp             CCCCCCC-CSSEECTTTCCEESSHHHHHHHHTTTCCSCS-SCCSCC
T ss_pred             ccccCCC-CCCeECCCcCcccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.8e-13  Score=64.16  Aligned_cols=44  Identities=18%  Similarity=0.314  Sum_probs=41.4

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2en1_A            3 SGSSGSG-EKPFKCEECGKRFTQNSQLHSHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             STTCCCC-CCSEEETTTTEEESSHHHHHHHGGGGSCCCC-SCCCCC
T ss_pred             cccCCCC-CCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            6778889 9999999999999999999999999999998 999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.9e-13  Score=64.48  Aligned_cols=44  Identities=18%  Similarity=0.292  Sum_probs=41.1

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTG-EKPYKCEKCGKGYNSKFNLDMHQKVHTGERP-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-CCSEEETTTTEEESCHHHHHHHHTTSCSCCS-SCCSCC
T ss_pred             CCcCCCC-CCCeECCCCCCccCCHHHHHHHHHhhCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.4e-12  Score=61.11  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=31.6

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2em3_A            2 SSGSS-GTGEKPYECKVCSKAFTQKAHLAQHQKTHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CSSCCSEECSSSCCEESSHHHHHHHHHHHCC-CCCCCSC
T ss_pred             CCCCC-CCCCcCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777765

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.4e-13  Score=64.73  Aligned_cols=44  Identities=20%  Similarity=0.347  Sum_probs=41.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|++ +++|.|..|++.|...+.|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTG-EKPFKCGECGKSYNQRVHLTQHQRVHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCCCSS-CCSEECTTTCCEESSSHHHHTTGGGGSSCCS-SCSCCC
T ss_pred             CCCCCCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999987

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.30  E-value=3.2e-12  Score=61.23  Aligned_cols=43  Identities=19%  Similarity=0.342  Sum_probs=30.8

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emj_A            2 SSGSS-GTGEKPFECAECGKSFSISSQLATHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCCCSEECSSSSCEESSHHHHHHHHHHHTT-SCSSSSC
T ss_pred             CCCCC-CCCCCCEECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 6777665

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.1e-12  Score=61.31  Aligned_cols=43  Identities=33%  Similarity=0.367  Sum_probs=31.1

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2em4_A            2 SSGSS-GTGQRPYECIECGKAFKTKSSLICHRRSHTG-EKPSGPS   44 (46)
T ss_dssp             CSCCC-CCCSSSEECSSSCCEESSHHHHHHHHHHHSS-SSCCCCC
T ss_pred             CCccc-cCCCcCcCCCCCCCccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777765

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.30  E-value=1.5e-13  Score=79.69  Aligned_cols=64  Identities=22%  Similarity=0.227  Sum_probs=57.4

Q ss_pred             CCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          12 LPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        12 l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      |..|+ . |++++||.|..|++.|.....|..|++.|   .++|.|..|++.|...+.|..|+++|++.
T Consensus        63 l~~h~-~-h~~~~~~~C~~C~k~f~~~~~l~~H~~~H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           63 LYRLL-A-SKAISQFVCPLCLMPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHHH-H-HHHHCSEECTTTCCEESSHHHHHHHHHHT---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             HHHHH-H-hCCCCCeECCCCCcccCCHhHHHHHHHHC---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            33444 4 78899999999999999999999999998   57899999999999999999999999875

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.7e-13  Score=63.65  Aligned_cols=44  Identities=20%  Similarity=0.283  Sum_probs=40.9

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTG-EKPYRCAECGKAFTDRSNLFTHQKIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSSSC-CCSEECSSSCCEESSHHHHHHHHTTTTTSCC-CCTTCC
T ss_pred             CCCCCCC-CCCeECCCCCchhCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            5678888 9999999999999999999999999999998 999875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.1e-13  Score=63.56  Aligned_cols=44  Identities=16%  Similarity=0.167  Sum_probs=41.0

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHH-HhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~-~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|++ +|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~-~~C~~C   47 (47)
T 2epx_A            3 SGSSGTG-KKPYECIECGKAFIQNTSLIRHWRYYHTGEKP-SGPSSG   47 (47)
T ss_dssp             CCCCCCC-CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS-SSCCCC
T ss_pred             cccccCC-CCCEECCccCchhCChHHHHHHhHhhcCCCCC-CCCCCC
Confidence            5677888 999999999999999999999999 9999998 999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.4e-12  Score=62.51  Aligned_cols=44  Identities=20%  Similarity=0.384  Sum_probs=40.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~~   46 (46)
T 2em2_A            3 SGSSGSG-EKPFKCKECGKAFRQNIHLASHLRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCCSCCC-CCSEECSSSCCEESSHHHHHHHHHHHCCCCS-SCSSCC
T ss_pred             CCCCCCC-CCCEECCcCCchhCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            5677888 9999999999999999999999999999998 999865

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.29  E-value=1.6e-12  Score=70.57  Aligned_cols=55  Identities=16%  Similarity=0.146  Sum_probs=48.2

Q ss_pred             HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCc
Q psy7447          47 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPET  103 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~  103 (114)
                      .+.. .+++.|++|++.|.....|..|+++|++++| |.|.+|++.|........|.
T Consensus        22 ~~~~-~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~-~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           22 LSAS-AECHLCPVCGESFASKGAQERHLRLLHAAQV-FPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             SCCC-CTTEECTTSCCEESSHHHHHHHHHTTSCSSS-EECTTSSCEESSHHHHHHHH
T ss_pred             CCCC-CCCEECCCCCCCcCcHHHHhhhhhhccCCCc-cCCCCCCCEeCCHHHHHHhC
Confidence            3445 7889999999999999999999999999998 99999999999876655553

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.28  E-value=6.4e-13  Score=67.90  Aligned_cols=51  Identities=8%  Similarity=0.237  Sum_probs=28.5

Q ss_pred             CCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCc
Q psy7447          12 LPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQK   67 (114)
Q Consensus        12 l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~   67 (114)
                      |..|+++ |++++||.|..|++.|.....|.   +.|.+ +++|.|..|++.|...
T Consensus         2 L~~h~~~-H~~~k~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            2 IETDERD-STNRASFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEVEED   52 (62)
T ss_dssp             CCCCSSS-CCSSSEEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBCEEC
T ss_pred             hhhHHHH-cCCCCCccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCccccC
Confidence            4456665 66666666666666665544443   44555 5555555555555443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.1e-12  Score=60.77  Aligned_cols=43  Identities=21%  Similarity=0.357  Sum_probs=29.9

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~~C~   44 (46)
T 2eor_A            2 SSGSS-GTGEKPYNCEECGKAFIHDSQLQEHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CSSSS-SSCCCSEECTTTCCEESSHHHHHHHHHHHHS-CCCSSST
T ss_pred             CCCcC-cCCCcCccCCCCCCCcCCHHHHHHHHHhcCC-CCCCCCC
Confidence            35565 6677777777777777777777777777776 6677665

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.7e-12  Score=60.56  Aligned_cols=43  Identities=23%  Similarity=0.379  Sum_probs=29.2

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eow_A            2 SSGSS-GTGEKPYKCNECGKAFRARSSLAIHQATHSG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-SCCCCCEECTTSCCEESSHHHHHHHHHHHCC-CSCSCTT
T ss_pred             CccCC-CCCCCCeeccccCChhcCHHHHHHHHHHcCC-CCCCCCC
Confidence            35555 6667777777777777777777777777766 6666664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=4.8e-12  Score=60.61  Aligned_cols=43  Identities=19%  Similarity=0.312  Sum_probs=33.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yth_A            2 SSGSS-GSGEKPFQCEECGKRFTQNSHLHSHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSC-CCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT-CCCSSCC
T ss_pred             CcccC-CCCCcCCCCCCCCcccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            46666 7788888888888888888888888888877 7777775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=3.6e-12  Score=61.07  Aligned_cols=43  Identities=23%  Similarity=0.381  Sum_probs=31.5

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytp_A            2 SSGSS-GTGERHYECSECGKAFARKSTLIMHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCS-SCCCCCEECSSSCCEESSHHHHHHHHTTTSC-CCCCSSC
T ss_pred             CcccC-cCCCCCeECCcCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            35666 7777777777777777777777777777777 7777765

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5e-12  Score=60.52  Aligned_cols=43  Identities=23%  Similarity=0.350  Sum_probs=32.4

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emi_A            2 SSGSS-GTGERHYECSECGKAFIQKSTLSMHQRIHRG-EKPSGPS   44 (46)
T ss_dssp             CCCCS-CSSCCCEECSSSCCEESSHHHHHHHHGGGCS-CCCCSCC
T ss_pred             CCCcc-cCCCCCCCCCCCCcccCCHHHHHHHHhHhCC-CCCCCCC
Confidence            46666 7777778888888777777777777777777 7777765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=3.1e-12  Score=66.98  Aligned_cols=57  Identities=14%  Similarity=0.153  Sum_probs=49.8

Q ss_pred             HHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCc
Q psy7447          45 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPET  103 (114)
Q Consensus        45 ~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~  103 (114)
                      .+.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|++.|........|.
T Consensus         6 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~   62 (72)
T 1x6e_A            6 SGIHSG-EKPYGCVECGKAFSRSSILVQHQRVHTGEKP-YKCLECGKAFSQNSGLINHQ   62 (72)
T ss_dssp             CCTTTT-CCCEECSSSCCEESSHHHHHHHHHGGGCSCC-EECSSSCCEESSHHHHHHHH
T ss_pred             CcccCC-CCCccCCCCCCccCCHHHHHHHHHhcCCCCC-eECCCCCcccCCHHHHHHHH
Confidence            356788 9999999999999999999999999999998 99999999998766544443

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.7e-12  Score=60.63  Aligned_cols=43  Identities=21%  Similarity=0.302  Sum_probs=30.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2eoz_A            2 SSGSS-GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ-ETLSGPS   44 (46)
T ss_dssp             CSCCC-CSSCCSEEETTTTEEESSHHHHHHHHHHHSS-CCSSSCC
T ss_pred             Ccccc-CCCCCCeECcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            45666 7777777777777777777777777777777 6777665

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.1e-12  Score=60.80  Aligned_cols=43  Identities=28%  Similarity=0.450  Sum_probs=31.5

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|.
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2enf_A            2 SSGSS-GTGEKPYKCNECGKVFTQNSHLVRHRGIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT-SSCCCCS
T ss_pred             CCCcC-CCCCcCeECCCCCcccCCHHHHHHHHHhhCC-CCCCCCC
Confidence            35666 7777777777777777777777777777777 7777765

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.5e-12  Score=60.67  Aligned_cols=43  Identities=23%  Similarity=0.366  Sum_probs=32.3

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq2_A            2 SSGSS-GTGGKPYQCNECGKAFSQTSKLARHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCS-SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC-CCCCCCC
T ss_pred             Ccccc-cCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            46666 7777777887787777777777777777777 7777775

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=5.9e-12  Score=60.30  Aligned_cols=42  Identities=19%  Similarity=0.273  Sum_probs=28.5

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         3 h~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2en9_A            3 SGSS-GAGKKLFKCNECKKTFTQSSSLTVHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCSS-CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS-SCCCSCC
T ss_pred             CCCC-CCCCCCEECCccCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            5555 6666777777777777776777777777666 6666664

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.27  E-value=5.2e-12  Score=59.27  Aligned_cols=41  Identities=24%  Similarity=0.402  Sum_probs=26.1

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|
T Consensus         1 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   41 (42)
T 2el5_A            1 GSSG-SSGENPYECSECGKAFNRKDQLISHQRTHAG-ESGPSS   41 (42)
T ss_dssp             CCSS-SSSCCSEECSSSCCEESSHHHHHHHHGGGCC-CCSCCC
T ss_pred             CCCC-CCCCCCccCCCcChhhCCHHHHHHHHHhcCC-CCCCCC
Confidence            3444 6666666666666666666666666666666 666655

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.26  E-value=2.8e-12  Score=64.05  Aligned_cols=47  Identities=9%  Similarity=0.055  Sum_probs=40.9

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   99 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~   99 (114)
                      +++|.|..|++.|.....|..|+++|++++| |.|..|++.|......
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l   48 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKP-YKCEFCEYAAAQKTSL   48 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCC-EECSSSSCEESSHHHH
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCC-cCCCCCcchhCCHHHH
Confidence            6789999999999999999999999999998 9999999999876543

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.6e-12  Score=60.63  Aligned_cols=43  Identities=23%  Similarity=0.367  Sum_probs=31.4

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2emg_A            2 SSGSS-GTGENPFICSECGKVFTHKTNLIIHQKIHTG-ERPSGPS   44 (46)
T ss_dssp             CCCCC-CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC-CCCSCSC
T ss_pred             CCCCC-CCCCCCEECCccCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            36666 7777777777777777777777777777777 7777765

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.4e-12  Score=60.35  Aligned_cols=43  Identities=23%  Similarity=0.324  Sum_probs=31.4

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ep1_A            2 SSGSS-GTGEKPYECSDCGKSFIKKSQLHVHQRIHTG-ENPSGPS   44 (46)
T ss_dssp             CCCCC-CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS-SCCCSSS
T ss_pred             ccccC-CCCCCCcCCCCCCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777765

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.9e-12  Score=60.51  Aligned_cols=43  Identities=28%  Similarity=0.417  Sum_probs=32.6

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|.
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~p~~C~   44 (46)
T 2yts_A            2 SSGSS-GTGEKPYICNECGKSFIQKSHLNRHRRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCSCC-CCSCCSEECSSSCCEESSHHHHHHHGGGTSS-CCSSCCC
T ss_pred             CCCCC-CCCCcCEECCCCChhhCChHHHHHHHHhcCC-CCCcCCC
Confidence            46666 7777788888888888777777778777777 7777775

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.4e-12  Score=60.41  Aligned_cols=43  Identities=19%  Similarity=0.257  Sum_probs=30.0

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eoh_A            2 SSGSS-GSGKKPYECKECRKTFIQIGHLNQHKRVHTG-ERSSGPS   44 (46)
T ss_dssp             CCCCS-CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS-CCSCSTT
T ss_pred             CCCCC-cCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            35666 6777777777777777777777777777776 6677664

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.26  E-value=2.1e-13  Score=69.76  Aligned_cols=54  Identities=9%  Similarity=0.108  Sum_probs=46.3

Q ss_pred             HHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCC
Q psy7447          43 RHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGP  101 (114)
Q Consensus        43 ~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~  101 (114)
                      .|++.|.+ +++|.|..|++.|.....|.   ++|++++| |.|..|++.|........
T Consensus         4 ~h~~~H~~-~k~~~C~~C~k~F~~~~~l~---~~H~~~k~-~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            4 TDERDSTN-RASFKCPVCSSTFTDLEANQ---LFDPMTGT-FRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCSSSCCS-SSEEECSSSCCEEEHHHHHH---HEETTTTE-EBCSSSCCBCEECTTCSC
T ss_pred             hHHHHcCC-CCCccCCCCCchhccHHHhH---hhcCCCCC-EECCCCCCccccCccccc
Confidence            46778889 99999999999999988876   88999988 999999999987755443

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.5e-12  Score=60.69  Aligned_cols=43  Identities=28%  Similarity=0.441  Sum_probs=31.1

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|.
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yti_A            2 SSGSS-GTGEKPYKCNECGKVFTQNSHLARHRGIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC-SCCSSTT
T ss_pred             CCCcC-CCCCcCeECCCCCcccCChhHHHHHhHhcCC-CCCCCCC
Confidence            35666 7777777777777777777777777777777 7777765

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.1e-12  Score=60.49  Aligned_cols=40  Identities=25%  Similarity=0.379  Sum_probs=22.9

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++++|.|..|++.|.....|..|++.|.+ +++|.|..|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG-EKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSS-SCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCC-CCCCCCCCC
Confidence            5555555665555555555555555555555 555555543

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.26  E-value=6.1e-12  Score=59.95  Aligned_cols=40  Identities=23%  Similarity=0.326  Sum_probs=20.8

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++++|.|..|++.|.....|..|++.|.+ +++|.|+.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~-~~~~~C~~c   44 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG-SVGKSGPSS   44 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSC-CCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccC-CCCCCCcCC
Confidence            4445555555555555555555555555555 555555544

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=5.5e-12  Score=59.80  Aligned_cols=42  Identities=17%  Similarity=0.379  Sum_probs=32.0

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2emb_A            2 SSGSS-GHTRKRYECSKCQATFNLRKHLIQHQKTHAA-KSGPSS   43 (44)
T ss_dssp             CCCSC-CCCCSSEECTTTCCEESCHHHHHHHGGGGCC-CCCTTC
T ss_pred             Ccccc-cCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCcCC
Confidence            46666 7777788888888888777777778777777 777766

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.26  E-value=4.9e-12  Score=60.30  Aligned_cols=42  Identities=31%  Similarity=0.424  Sum_probs=39.4

Q ss_pred             HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCC
Q psy7447          47 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQG   90 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~   90 (114)
                      .|++ +++|.|..|++.|.....|..|+++|+++++ |.|+.||
T Consensus         4 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~cg   45 (45)
T 2epq_A            4 GSSG-EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG-KSGPSSG   45 (45)
T ss_dssp             CCSS-CCSSEETTTTEECSCHHHHHHHHHHHSCCCC-CCCCCCC
T ss_pred             CcCC-CCCCcCCCCCcccCCHHHHHHHHHHccCCCC-CCCcCCC
Confidence            4677 8999999999999999999999999999998 9999996

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6.7e-12  Score=59.41  Aligned_cols=42  Identities=21%  Similarity=0.341  Sum_probs=28.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2eof_A            2 SSGSS-GTGEKPYECNECQKAFNTKSNLMVHQRTHTG-ESGPSS   43 (44)
T ss_dssp             CCSSC-CSCCCSEECTTTCCEESCHHHHHHHHHHTTT-SSCSCC
T ss_pred             CCccC-CCCCCCeECCCCCcccCCHhHHHHHHHHhCC-CCCCCC
Confidence            35565 6677777777777777777777777777766 666665

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.25  E-value=1.6e-12  Score=64.48  Aligned_cols=50  Identities=22%  Similarity=0.260  Sum_probs=36.5

Q ss_pred             hhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcc
Q psy7447          33 KVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEML   84 (114)
Q Consensus        33 ~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~   84 (114)
                      +.|.....|..|++.|.+ +++|.|..|++.|...+.|..|+++|++++| |
T Consensus         4 k~~~~~~~l~~h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQS-EQPATCPICYAVIRQSRNLRRHLELRHFAKP-G   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTS-SCCEECTTTCCEESSHHHHHHHHHHHTTTSC-C
T ss_pred             cccCCCcchhhHHHhcCC-CCCccCCCCCcccCCHHHHHHHHHHhccCCC-C
Confidence            345555666677777777 7777777777777777777777777777776 5

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.3e-12  Score=60.40  Aligned_cols=43  Identities=21%  Similarity=0.394  Sum_probs=31.5

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq1_A            2 SSGSS-GTGEKPYKCNECGKAFRAHSNLTTHQVIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC-SCCSSCC
T ss_pred             Ccccc-cCCCCCeECCcCChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777765

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.5e-12  Score=60.70  Aligned_cols=40  Identities=20%  Similarity=0.228  Sum_probs=24.9

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      |+++++|.|..|++.|.....|..|++.|.+ +++|.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTR-EKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHH-CCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCC-CCCCCCCCC
Confidence            5566666666666666666666666666666 666666554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.7e-12  Score=60.26  Aligned_cols=42  Identities=19%  Similarity=0.270  Sum_probs=28.4

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         3 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2ytf_A            3 SGSS-GTGEKPFECSECQKAFNTKSNLIVHQRTHTG-EKPSGPS   44 (46)
T ss_dssp             CCCS-SCCCCSEECSSSCCEESSHHHHHHHHHTSCS-SSSSCCC
T ss_pred             CCCC-CCCCCCcCCCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            5555 6666777777777777766677777766666 6666664

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6.2e-12  Score=60.21  Aligned_cols=43  Identities=23%  Similarity=0.367  Sum_probs=30.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2em6_A            2 SSGSS-GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG-EKPSGPS   44 (46)
T ss_dssp             CCCSC-CCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS-SCCCCTT
T ss_pred             CCccc-cCCCCCeECCCCCcccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            35666 7777777777777777777777777777777 7777665

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6.2e-12  Score=60.21  Aligned_cols=43  Identities=23%  Similarity=0.324  Sum_probs=29.1

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yto_A            2 SSGSS-GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG-ERHSGPS   44 (46)
T ss_dssp             CCCCC-CCSCCCEECSSSCCEESSHHHHHHHHHHHTC-CCBTTTB
T ss_pred             Ccccc-cCCCCCEECcccCCccCCHhHHHHHHHHcCC-CCCCCCC
Confidence            35566 6667777777777777777777777777766 6666664

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6.3e-12  Score=60.12  Aligned_cols=43  Identities=23%  Similarity=0.377  Sum_probs=31.4

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2yrj_A            2 SSGSS-GTGEKPYRCGECGKAFAQKANLTQHQRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCC-CCCCCCEECSSSCCEESSHHHHHHHHTTTSS-CCSSCSC
T ss_pred             CCccC-CCCCCCeECCCCCCccCCHHHHHHHHHHcCC-CCCCCCC
Confidence            36666 7777777777777777777777777777777 7777765

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=7.4e-12  Score=58.69  Aligned_cols=40  Identities=13%  Similarity=0.245  Sum_probs=22.1

Q ss_pred             cccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          16 TLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        16 ~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      +++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|
T Consensus         2 ~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   41 (42)
T 2yte_A            2 SSG-SSGEKPYSCAECKETFSDNNRLVQHQKMHTV-KSGPSS   41 (42)
T ss_dssp             CSS-SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC-CSSCCC
T ss_pred             CcC-cCCCCCeECCCCCCccCCHHHHHHHHHHhCC-CCCCCC
Confidence            344 5555555555555555555555555555555 555544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.3e-12  Score=60.48  Aligned_cols=42  Identities=21%  Similarity=0.411  Sum_probs=29.8

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         3 h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eon_A            3 SGSS-GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG-ERPSGPS   44 (46)
T ss_dssp             CSSS-CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS-CCSCTTS
T ss_pred             CCCC-CCCCcccCCCCCCcccCcHHHHHHHHHhcCC-CCCCCCC
Confidence            5555 6777777777777777777777777777777 6777665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3e-12  Score=60.04  Aligned_cols=42  Identities=19%  Similarity=0.253  Sum_probs=38.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|+
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2yte_A            1 GSSGSSG-EKPYSCAECKETFSDNNRLVQHQKMHTVKSG-PSSG   42 (42)
T ss_dssp             CCSSSCS-CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS-CCCC
T ss_pred             CCcCcCC-CCCeECCCCCCccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            4567888 9999999999999999999999999999998 9885

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=8.5e-12  Score=59.12  Aligned_cols=42  Identities=12%  Similarity=0.251  Sum_probs=28.2

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2yu5_A            2 SSGSS-GAGENPFKCSKCDRVFTQRNYLVQHERTHAR-KSGPSS   43 (44)
T ss_dssp             CCSCC-CSCCCSEECSSSSCEESSSHHHHHHHHHCCC-CCSSCC
T ss_pred             CCccc-cCCCCCeECCCCCchhCCHHHHHHHhHhcCC-CCCCCC
Confidence            35565 6666777777777777766667777666666 666665

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.1e-12  Score=59.87  Aligned_cols=42  Identities=24%  Similarity=0.366  Sum_probs=31.1

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2eoj_A            2 SSGSS-GTGENPYECCECGKVFSRKDQLVSHQKTHSG-QSGPSS   43 (44)
T ss_dssp             CSCCS-SSSCCSCEETTTTEECSSHHHHHHHHTTSSS-SCSCCC
T ss_pred             CCccc-cCCCcCeeCCCCCCccCCHHHHHHHHHHcCC-CCCCCC
Confidence            46666 7777777777777777777777777777777 777766

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.24  E-value=3.4e-12  Score=61.13  Aligned_cols=43  Identities=19%  Similarity=0.260  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emj_A            3 SGSSGTG-EKPFECAECGKSFSISSQLATHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-CCSEECSSSSCEESSHHHHHHHHHHHTTSCS-SSSCC
T ss_pred             CCCCCCC-CCCEECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5678888 9999999999999999999999999999998 99974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.8e-12  Score=60.06  Aligned_cols=43  Identities=19%  Similarity=0.234  Sum_probs=30.9

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2emz_A            2 SSGSS-GSGERPFKCNECGKGFGRRSHLAGHLRLHSR-EKSSGPS   44 (46)
T ss_dssp             CCCSC-SSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH-TTCCCSC
T ss_pred             CCCcC-CCCCCCeECCCCCcccCCHHHHHHHHHHhCC-CCCCCCC
Confidence            35666 7777777777777777777777777777777 7777765

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=3.3e-12  Score=61.21  Aligned_cols=43  Identities=19%  Similarity=0.205  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em4_A            3 SGSSGTG-QRPYECIECGKAFKTKSSLICHRRSHTGEKP-SGPSS   45 (46)
T ss_dssp             SCCCCCC-SSSEECSSSCCEESSHHHHHHHHHHHSSSSC-CCCCC
T ss_pred             CccccCC-CcCcCCCCCCCccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            5678888 9999999999999999999999999999998 99974

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=1.1e-12  Score=68.41  Aligned_cols=55  Identities=13%  Similarity=0.181  Sum_probs=48.1

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCcc
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETL  104 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~~  104 (114)
                      +.+ +++|.|..|++.|.....|..|+++|+++++ |.|..|++.|........|..
T Consensus         4 ~~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~C~~~f~~~~~L~~H~~   58 (70)
T 1x5w_A            4 GSS-GHPEKCSECSYSCSSKAALRIHERIHCTDRP-FKCNYCSFDTKQPSNLSKHMK   58 (70)
T ss_dssp             CCC-CCSEECSSSSCEESSHHHHHHHHGGGCCSCS-EECSSSSCEESSHHHHHHHHH
T ss_pred             CCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-EeCCCCCCccCCHHHHHHHHH
Confidence            456 8999999999999999999999999999998 999999999987765554443

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.4e-12  Score=59.49  Aligned_cols=42  Identities=24%  Similarity=0.347  Sum_probs=29.1

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2en7_A            2 SSGSS-GTGMKPYVCNECGKAFRSKSYLIIHTRTHTG-ESGPSS   43 (44)
T ss_dssp             CSCCC-SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC-SSSSCC
T ss_pred             CCCcC-CCCCcCeECCCCCCccCCHHHHHHHhhhcCC-CCCCCC
Confidence            35565 6777777777777777777777777777766 666665

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=3.1e-12  Score=64.58  Aligned_cols=49  Identities=12%  Similarity=0.104  Sum_probs=44.5

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCC
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPE  102 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~  102 (114)
                      ++|.|..|++.|.....|..|+++|++++| |.|..|++.|........|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H   49 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP-YPCGLCNRAFTRRDLLIRH   49 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS-EECTTTCCEESSHHHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC-ccCCCCCCccCCHHHHHHH
Confidence            579999999999999999999999999998 9999999999977665555

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.3e-12  Score=61.74  Aligned_cols=43  Identities=19%  Similarity=0.237  Sum_probs=39.9

Q ss_pred             HHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          45 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        45 ~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      ++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|.+|
T Consensus         4 ~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ep0_A            4 GSSGTG-EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP-SGPSSG   46 (46)
T ss_dssp             CCSSTT-CCSEECSSSCCEESSHHHHHHHHTTTSSSCC-CSCCCC
T ss_pred             CCCCCC-CCCeeCcccCcccCChHHHHHHHHHhCCCCC-CCCCCC
Confidence            456788 9999999999999999999999999999998 999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.23  E-value=2.8e-12  Score=60.21  Aligned_cols=42  Identities=21%  Similarity=0.271  Sum_probs=38.4

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|+
T Consensus         1 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   42 (42)
T 2el5_A            1 GSSGSSG-ENPYECSECGKAFNRKDQLISHQRTHAGESG-PSSG   42 (42)
T ss_dssp             CCSSSSS-CCSEECSSSCCEESSHHHHHHHHGGGCCCCS-CCCC
T ss_pred             CCCCCCC-CCCccCCCcChhhCCHHHHHHHHHhcCCCCC-CCCC
Confidence            4567888 9999999999999999999999999999998 9984

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=9.5e-12  Score=59.54  Aligned_cols=42  Identities=24%  Similarity=0.339  Sum_probs=31.1

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|.
T Consensus         3 h~~~-h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2enh_A            3 SGSS-GTGEKPYECDVCRKAFSHHASLTQHQRVHSG-EKPSGPS   44 (46)
T ss_dssp             CCCC-CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCC-SCCCCCC
T ss_pred             CCCC-cCCCCCcCCCCcCchhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            5566 7777777777777777777777777777777 7777765

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=8.1e-12  Score=58.58  Aligned_cols=41  Identities=17%  Similarity=0.241  Sum_probs=28.9

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|
T Consensus         2 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2en2_A            2 SSGS-SGGEKPYKCETCGARFVQVAHLRAHVLIHTG-SGPSSG   42 (42)
T ss_dssp             CCCC-CCSSCSEECTTTCCEESSHHHHHHHTHHHHS-CCSSCC
T ss_pred             CCcc-cCCCCCEeCCCcChhhCCHHHHHHHHHHcCC-CCCCCC
Confidence            5555 6777777777777777777777777777777 666655

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=7.5e-12  Score=59.87  Aligned_cols=43  Identities=14%  Similarity=0.182  Sum_probs=31.1

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C~   44 (46)
T 2en3_A            2 SSGSS-GTGEKPFQCKECGMNFSWSCSLFKHLRSHER-TDPSGPS   44 (46)
T ss_dssp             CCCCC-SCCCCSEECSSSCCEESSSHHHHHHHHHHHH-SCCSSCS
T ss_pred             ccccc-cCCCCCeeCcccChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 7777777777777777777777777777777 7777664

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.4e-12  Score=60.67  Aligned_cols=43  Identities=19%  Similarity=0.274  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eow_A            3 SGSSGTG-EKPYKCNECGKAFRARSSLAIHQATHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCCSCC-CCCEECTTSCCEESSHHHHHHHHHHHCCCSC-SCTTC
T ss_pred             ccCCCCC-CCCeeccccCChhcCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.3e-12  Score=60.76  Aligned_cols=43  Identities=23%  Similarity=0.319  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2em3_A            3 SGSSGTG-EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSS-CCSEECSSSCCEESSHHHHHHHHHHHCCCCC-CCSCC
T ss_pred             CCCCCCC-CcCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.7e-12  Score=61.50  Aligned_cols=43  Identities=19%  Similarity=0.223  Sum_probs=39.8

Q ss_pred             HHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          45 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        45 ~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      ++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|
T Consensus         4 ~~~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   46 (46)
T 2ytt_A            4 GSSGEG-EKPYQCSECGKSFSGSYRLTQHWITHTREKP-SGPSSG   46 (46)
T ss_dssp             SSSCSC-CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC-CSCCCC
T ss_pred             CCCCCC-CCCeeCCCCCcccCCHHHHHHHHHHcCCCCC-CCCCCC
Confidence            456788 9999999999999999999999999999998 999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=5.6e-12  Score=60.98  Aligned_cols=41  Identities=24%  Similarity=0.478  Sum_probs=20.6

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCP   61 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~   61 (114)
                      |.++++|.|..|++.|.....|..|++.|.+ +++|.|.+|+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C~   47 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSG-EKPYSSGPSS   47 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCS-CCCCCSCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCC-CCCccCCCCC
Confidence            3444555555555555555555555555554 4555555444

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.6e-12  Score=60.62  Aligned_cols=43  Identities=19%  Similarity=0.268  Sum_probs=39.9

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp-~~C~~   45 (46)
T 2eor_A            3 SGSSGTG-EKPYNCEECGKAFIHDSQLQEHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             SSSSSSC-CCSEECTTTCCEESSHHHHHHHHHHHHSCCC-SSSTT
T ss_pred             CCcCcCC-CcCccCCCCCCCcCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            5678888 9999999999999999999999999999998 99974

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=3e-12  Score=65.82  Aligned_cols=53  Identities=13%  Similarity=0.112  Sum_probs=45.6

Q ss_pred             HHhcCCCCCeeCCCCCcccCCchHHHHHHHH-h-cCCCCcccccCCCcccccccccC
Q psy7447          46 TLECGKEPRYQCPHCPYRGKQKVHLKTHVAI-K-HQGPEMLSVKHQGPEMLSIKHQG  100 (114)
Q Consensus        46 ~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~-~-~~~~p~~~C~~C~~~f~~~~~~~  100 (114)
                      +.|.+ +++|.|..|++.|.....|..|++. | .+++| |.|+.|++.|.......
T Consensus         3 ~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~-~~C~~C~k~f~~~~~L~   57 (66)
T 2drp_A            3 FTKEG-EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-YPCPFCFKEFTRKDNMT   57 (66)
T ss_dssp             CEEEE-TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC-EECTTTCCEESCHHHHH
T ss_pred             cccCC-CcceECCCCcchhCCHHHHHHHHHHHcCCCCcC-eECCCCCCccCCHHHHH
Confidence            45778 8999999999999999999999998 5 46777 99999999998765433

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=3.2e-12  Score=67.74  Aligned_cols=60  Identities=18%  Similarity=0.252  Sum_probs=49.9

Q ss_pred             HHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHH-HhcCC-CCcccccCCCcccccccccCCCc
Q psy7447          42 YRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQG-PEMLSVKHQGPEMLSIKHQGPET  103 (114)
Q Consensus        42 ~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~-~~~~~-~p~~~C~~C~~~f~~~~~~~~~~  103 (114)
                      ..|++.|.+ +++|.|..|++.|.....|..|++ .|.++ ++ |.|..|++.|........|.
T Consensus         4 ~~H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~-~~C~~C~~~f~~~~~L~~H~   65 (77)
T 2ct1_A            4 GSSGRTHSG-EKPYECYICHARFTQSGTMKMHILQKHTENVAK-FHCPHCDTVIARKSDLGVHL   65 (77)
T ss_dssp             CCCCCCCSC-CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSS-EECSSSSCEESSHHHHHHHH
T ss_pred             CccccccCC-CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCc-cCCCCCCCccCCHHHHHHHH
Confidence            357888999 999999999999999999999998 56554 56 99999999998766544443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.21  E-value=3.4e-12  Score=67.17  Aligned_cols=56  Identities=14%  Similarity=0.236  Sum_probs=48.6

Q ss_pred             HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCcc
Q psy7447          47 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETL  104 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~~  104 (114)
                      .+.+ .++|.|..|++.|.....|..|+++|+++++ |.|..|++.|........|..
T Consensus        11 ~~~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~-~~C~~C~k~f~~~~~L~~H~~   66 (74)
T 2lce_A           11 MTHS-DKPYKCDRCQASFRYKGNLASHKTVHTGEKP-YRCNICGAQFNRPANLKTHTR   66 (74)
T ss_dssp             CCCC-CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS-EECTTTCCEESCHHHHHHHHH
T ss_pred             ccCC-CCCeECCCCCceeCCHHHHHHHHHHcCCCCC-EECCCCCchhCCHHHHHHHHH
Confidence            4456 8899999999999999999999999999998 999999999997766554443

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.21  E-value=1.3e-11  Score=57.83  Aligned_cols=41  Identities=20%  Similarity=0.209  Sum_probs=26.6

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|
T Consensus         2 H~~~-H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~-~k~~~C   42 (42)
T 2epc_A            2 SSGS-SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ-SGPSSG   42 (42)
T ss_dssp             CCSC-CCSSCCEECSSSCCEESSHHHHHHHHHHTTC-CCCCCC
T ss_pred             CCcc-CCCCCCeECCCCCcccCCHHHHHHHhhhcCC-CCCCCC
Confidence            4445 6666666666666666666666666666666 666654

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.5e-12  Score=58.88  Aligned_cols=41  Identities=27%  Similarity=0.356  Sum_probs=29.6

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|
T Consensus         2 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2ytb_A            2 SSGS-SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG-SGPSSG   42 (42)
T ss_dssp             CCCC-CCSCCSBCCTTTTCCBSSHHHHHTTGGGTSC-CSCCCC
T ss_pred             Cccc-cCCCCCeeCCCccchhCCHHHHHHHHHHhCC-CCCCCC
Confidence            5566 7777777777777777777777777777777 666655

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.9e-12  Score=60.29  Aligned_cols=43  Identities=16%  Similarity=0.245  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         3 h~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2en9_A            3 SGSSGAG-KKLFKCNECKKTFTQSSSLTVHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSSCCS-SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCC-CSCCC
T ss_pred             CCCCCCC-CCCEECCccCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=8e-12  Score=59.21  Aligned_cols=42  Identities=19%  Similarity=0.311  Sum_probs=29.2

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|
T Consensus         2 ~H~~~-H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~C   43 (44)
T 2eox_A            2 SSGSS-GTDSKSYNCNECGKAFTRIFHLTRHQKIHTR-KSGPSS   43 (44)
T ss_dssp             CCCCC-CCCCCCEEETTTTEEESSSHHHHTTHHHHCC-CCCCSC
T ss_pred             CCCcC-CCCCCCeECcccCcccCCHHHHHHHHHHhCC-CCCCCC
Confidence            45666 6777777777777777777777777777776 666665

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1e-11  Score=59.32  Aligned_cols=43  Identities=21%  Similarity=0.408  Sum_probs=32.2

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|+
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eq3_A            2 SSGSS-GTGEKPYECNQCGKAFSVRSSLTTHQAIHTG-KKPSGPS   44 (46)
T ss_dssp             CCCCS-SCCCCSSEETTTTEECSSHHHHHHHHTTSCC-CCCCCSC
T ss_pred             CcccC-CCCCCCeECCCCChhhCCHHHHHHHHHHhCC-CCCCCCC
Confidence            46666 7777777887787777777777777777777 7777765

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=1.1e-11  Score=59.86  Aligned_cols=42  Identities=14%  Similarity=0.106  Sum_probs=38.9

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCc
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGP   91 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~   91 (114)
                      +.+ +++|.|..|++.|.....|..|+++|++++| |.|.+|++
T Consensus         7 ~~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C~k   48 (48)
T 2epr_A            7 GRT-RKQVACEICGKIFRDVYHLNRHKLSHSGEKP-YSSGPSSG   48 (48)
T ss_dssp             CCC-CCSEEETTTTEEESSHHHHHHHGGGSCSCCC-CCSCCCCC
T ss_pred             CCC-CcCeeCCCCCcccCCHHHHHHHHHhcCCCCC-ccCCCCCC
Confidence            455 8899999999999999999999999999998 99999985

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2.4e-12  Score=68.38  Aligned_cols=54  Identities=17%  Similarity=0.286  Sum_probs=47.3

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcC---CCCcccccCCCcccccccccCCCc
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ---GPEMLSVKHQGPEMLSIKHQGPET  103 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~---~~p~~~C~~C~~~f~~~~~~~~~~  103 (114)
                      |++ +++|.|..|++.|.....|..|+++|++   +++ |.|..|++.|........|.
T Consensus         2 h~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~-~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            2 SSG-SSGLQCEICGFTCRQKASLNWHQRKHAETVAALR-FPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CCS-CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCC-EECTTTCCEESSHHHHHHHH
T ss_pred             CCC-CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcc-cCCCCCCchhCCHHHHHHHH
Confidence            567 8999999999999999999999999986   677 99999999998776655554

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.6e-12  Score=60.60  Aligned_cols=43  Identities=16%  Similarity=0.244  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytf_A            3 SGSSGTG-EKPFECSECQKAFNTKSNLIVHQRTHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSCC-CCSEECSSSCCEESSHHHHHHHHHTSCSSSS-SCCCC
T ss_pred             CCCCCCC-CCCcCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.9e-12  Score=60.90  Aligned_cols=43  Identities=23%  Similarity=0.308  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enf_A            3 SGSSGTG-EKPYKCNECGKVFTQNSHLVRHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSC-CCCSC
T ss_pred             CCcCCCC-CcCeECCCCCcccCCHHHHHHHHHhhCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.9e-11  Score=57.92  Aligned_cols=41  Identities=22%  Similarity=0.417  Sum_probs=25.5

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      |+++ |+++++|.|..|++.|.....|..|++.|.+ +++|.|
T Consensus         3 h~~~-h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   43 (44)
T 2eou_A            3 SGSS-GAAKTTSECQECGKIFRHSSLLIEHQALHAG-ESGPSS   43 (44)
T ss_dssp             CSCS-CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT-SCCCCC
T ss_pred             CCCC-CCCCcCeECCCCCcccCCHHHHHHHHHHHCC-CCCCCC
Confidence            4445 6666666666666666666666666666666 666655

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.7e-12  Score=59.67  Aligned_cols=42  Identities=21%  Similarity=0.283  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eof_A            3 SGSSGTG-EKPYECNECQKAFNTKSNLMVHQRTHTGESG-PSSG   44 (44)
T ss_dssp             CSSCCSC-CCSEECTTTCCEESCHHHHHHHHHHTTTSSC-SCCC
T ss_pred             CccCCCC-CCCeECCCCCcccCCHhHHHHHHHHhCCCCC-CCCC
Confidence            5677888 9999999999999999999999999999998 9985

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.20  E-value=1e-12  Score=70.85  Aligned_cols=63  Identities=19%  Similarity=0.236  Sum_probs=52.9

Q ss_pred             HHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC----CCcccccCCCcccccccccCCCccc
Q psy7447          41 LYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG----PEMLSVKHQGPEMLSIKHQGPETLS  105 (114)
Q Consensus        41 l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~----~p~~~C~~C~~~f~~~~~~~~~~~~  105 (114)
                      +..|+++|.+ +++|.|..|++.|.....|..|++.+++.    ++ |.|..|++.|........|...
T Consensus         3 ~~~H~~~H~~-~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~-~~C~~C~~~f~~~~~L~~H~~~   69 (86)
T 1x6h_A            3 SGSSGRTHTG-EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA-FVCSKCGKTFTRRNTMARHADN   69 (86)
T ss_dssp             TTCCSTTCCC-CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCC-EECSSSCCEESCHHHHHHHHHH
T ss_pred             cccccceecC-CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcc-eECCCCCChhCCHHHHHHHHHH
Confidence            4467889999 99999999999999999999999988876    45 9999999999876655444433

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.8e-12  Score=60.53  Aligned_cols=43  Identities=21%  Similarity=0.301  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ep1_A            3 SGSSGTG-EKPYECSDCGKSFIKKSQLHVHQRIHTGENP-SGPSS   45 (46)
T ss_dssp             CCCCCSS-CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCC-CSSSC
T ss_pred             cccCCCC-CCCcCCCCCCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.2e-12  Score=60.80  Aligned_cols=43  Identities=21%  Similarity=0.285  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2ytp_A            3 SGSSGTG-ERHYECSECGKAFARKSTLIMHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSCC-CCCEECSSSCCEESSHHHHHHHHTTTSCCCC-CSSCC
T ss_pred             cccCcCC-CCCeECCcCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5678888 9999999999999999999999999999998 99974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.6e-12  Score=60.65  Aligned_cols=43  Identities=19%  Similarity=0.234  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2emg_A            3 SGSSGTG-ENPFICSECGKVFTHKTNLIIHQKIHTGERP-SGPSS   45 (46)
T ss_dssp             CCCCCCS-CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCC-SCSCC
T ss_pred             CCCCCCC-CCCEECCccCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.6e-12  Score=60.37  Aligned_cols=43  Identities=21%  Similarity=0.297  Sum_probs=39.8

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~   45 (46)
T 2eoz_A            3 SGSSGTG-EKPYSCNVCGKAFVLSAHLNQHLRVHTQETL-SGPSS   45 (46)
T ss_dssp             SCCCCSS-CCSEEETTTTEEESSHHHHHHHHHHHSSCCS-SSCCC
T ss_pred             ccccCCC-CCCeECcccChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            6678888 9999999999999999999999999999998 99973

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.2e-12  Score=60.21  Aligned_cols=43  Identities=19%  Similarity=0.271  Sum_probs=39.5

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eoh_A            3 SGSSGSG-KKPYECKECRKTFIQIGHLNQHKRVHTGERS-SGPSS   45 (46)
T ss_dssp             CCCSCCC-SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCS-CSTTC
T ss_pred             CCCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.2e-12  Score=60.45  Aligned_cols=43  Identities=23%  Similarity=0.305  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emi_A            3 SGSSGTG-ERHYECSECGKAFIQKSTLSMHQRIHRGEKP-SGPSS   45 (46)
T ss_dssp             CCCSCSS-CCCEECSSSCCEESSHHHHHHHHGGGCSCCC-CSCCC
T ss_pred             CCcccCC-CCCCCCCCCCcccCCHHHHHHHHhHhCCCCC-CCCCC
Confidence            5678888 9999999999999999999999999999998 99974

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.19  E-value=4.2e-12  Score=63.39  Aligned_cols=49  Identities=16%  Similarity=0.234  Sum_probs=43.5

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPET  103 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~  103 (114)
                      ||.|..|++.|.....|..|+++|++++| |.|..|++.|........|.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l~~H~   49 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP-YHCTYCNFSFKTKGNLTKHM   49 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC-EECSSSSCEESSHHHHHHHH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC-ccCCCCCchhcCHHHHHHHH
Confidence            58899999999999999999999999998 99999999998776554443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.4e-12  Score=60.16  Aligned_cols=42  Identities=19%  Similarity=0.261  Sum_probs=39.3

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (46)
T 2yto_A            3 SGSSGTG-EKPYKCSDCGKAFTRKSGLHIHQQSHTGERH-SGPS   44 (46)
T ss_dssp             CCCCCCS-CCCEECSSSCCEESSHHHHHHHHHHHTCCCB-TTTB
T ss_pred             cccccCC-CCCEECcccCCccCCHhHHHHHHHHcCCCCC-CCCC
Confidence            5677888 9999999999999999999999999999998 9997

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=7.5e-12  Score=59.33  Aligned_cols=42  Identities=19%  Similarity=0.249  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2yu5_A            3 SGSSGAG-ENPFKCSKCDRVFTQRNYLVQHERTHARKSG-PSSG   44 (44)
T ss_dssp             CSCCCSC-CCSEECSSSSCEESSSHHHHHHHHHCCCCCS-SCCC
T ss_pred             CccccCC-CCCeECCCCCchhCCHHHHHHHhHhcCCCCC-CCCC
Confidence            5677888 9999999999999999999999999999998 9884

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.5e-12  Score=60.68  Aligned_cols=43  Identities=19%  Similarity=0.245  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|++ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq2_A            3 SGSSGTG-GKPYQCNECGKAFSQTSKLARHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCSSSS-SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCC-CCCCC
T ss_pred             cccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.2e-12  Score=60.77  Aligned_cols=43  Identities=23%  Similarity=0.318  Sum_probs=39.6

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yti_A            3 SGSSGTG-EKPYKCNECGKVFTQNSHLARHRGIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCSC-CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCC-SSTTC
T ss_pred             CCcCCCC-CcCeECCCCCcccCChhHHHHHhHhcCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1e-11  Score=58.26  Aligned_cols=41  Identities=17%  Similarity=0.287  Sum_probs=27.2

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      |+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|
T Consensus         2 H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~~~~~C   42 (42)
T 2eos_A            2 SSGS-SGGEKPYPCEICGTRFRHLQTLKSHLRIHTG-SGPSSG   42 (42)
T ss_dssp             CCSC-CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC-CSSTTC
T ss_pred             CCcc-cCCCCCEECCCCCCccCCHHHHHHHHHhcCC-CCCCCC
Confidence            4555 6666777777777777766667777666666 666654

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=2.8e-11  Score=57.91  Aligned_cols=38  Identities=21%  Similarity=0.369  Sum_probs=23.6

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      |+++++|.|..|++.|.....|..|++.|.+ +++|.|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTG-EKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSS-CCCSSCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCC-CCCCCCC
Confidence            5566666666666666666666666666666 5666554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.6e-12  Score=60.01  Aligned_cols=42  Identities=19%  Similarity=0.194  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2en7_A            3 SGSSGTG-MKPYVCNECGKAFRSKSYLIIHTRTHTGESG-PSSG   44 (44)
T ss_dssp             SCCCSSS-SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS-SCCC
T ss_pred             CCcCCCC-CcCeECCCCCCccCCHHHHHHHhhhcCCCCC-CCCC
Confidence            5677888 9999999999999999999999999999998 9985

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.3e-12  Score=60.46  Aligned_cols=43  Identities=23%  Similarity=0.325  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2em6_A            3 SGSSGMG-EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSCCCC-CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCC-CCTTC
T ss_pred             CccccCC-CCCeECCCCCcccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.2e-12  Score=60.44  Aligned_cols=43  Identities=21%  Similarity=0.313  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq1_A            3 SGSSGTG-EKPYKCNECGKAFRAHSNLTTHQVIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCC-SSCCC
T ss_pred             cccccCC-CCCeECCcCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.8e-12  Score=60.52  Aligned_cols=43  Identities=26%  Similarity=0.308  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p-~~C~~   45 (46)
T 2yts_A            3 SGSSGTG-EKPYICNECGKSFIQKSHLNRHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CSCCCCS-CCSEECSSSCCEESSHHHHHHHGGGTSSCCS-SCCCC
T ss_pred             CCCCCCC-CcCEECCCCChhhCChHHHHHHHHhcCCCCC-cCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.6e-12  Score=60.37  Aligned_cols=43  Identities=23%  Similarity=0.375  Sum_probs=39.6

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yth_A            3 SGSSGSG-EKPFQCEECGKRFTQNSHLHSHQRVHTGEKP-SGPSS   45 (46)
T ss_dssp             CCSCCCC-SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCC-SSCCC
T ss_pred             cccCCCC-CcCCCCCCCCcccCCHHHHHHHHHhcCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.7e-12  Score=60.69  Aligned_cols=43  Identities=19%  Similarity=0.285  Sum_probs=39.6

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eon_A            3 SGSSGTG-EKPYKCQVCGKAFRVSSHLVQHHSVHSGERP-SGPSS   45 (46)
T ss_dssp             CSSSCSS-CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCS-CTTSC
T ss_pred             CCCCCCC-CcccCCCCCCcccCcHHHHHHHHHhcCCCCC-CCCCC
Confidence            4677888 9999999999999999999999999999998 99974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.7e-12  Score=60.27  Aligned_cols=43  Identities=23%  Similarity=0.310  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 H~~~H~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2yrj_A            3 SGSSGTG-EKPYRCGECGKAFAQKANLTQHQRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-CCCEECSSSCCEESSHHHHHHHHTTTSSCCS-SCSCC
T ss_pred             CccCCCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.18  E-value=4.9e-14  Score=76.70  Aligned_cols=71  Identities=18%  Similarity=0.173  Sum_probs=63.5

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +.+...|..|+++ |.++++|.|..|++.|.....|..|++.+.+  .++.|..|++.|.....|..|++..++
T Consensus        13 f~~~~~L~~H~~~-H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           13 FSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             ESCHHHHHHHHHH-HHCCCCEECTTTCCEESSHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHH-cCCCCCccCCCCCCccCCHHHHHHHHHHhCC--CcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence            4456778899998 9999999999999999999999999999874  679999999999999999999997754

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.17  E-value=9e-12  Score=58.37  Aligned_cols=41  Identities=24%  Similarity=0.215  Sum_probs=37.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   86 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C   86 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|
T Consensus         2 H~~~H~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~-~~C   42 (42)
T 2epc_A            2 SSGSSGG-ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP-SSG   42 (42)
T ss_dssp             CCSCCCS-SCCEECSSSCCEESSHHHHHHHHHHTTCCCC-CCC
T ss_pred             CCccCCC-CCCeECCCCCcccCCHHHHHHHhhhcCCCCC-CCC
Confidence            4567888 9999999999999999999999999999998 987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.7e-12  Score=60.10  Aligned_cols=43  Identities=16%  Similarity=0.333  Sum_probs=39.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         3 h~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2emz_A            3 SGSSGSG-ERPFKCNECGKGFGRRSHLAGHLRLHSREKS-SGPSS   45 (46)
T ss_dssp             CCSCSSC-CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTC-CCSCC
T ss_pred             CCcCCCC-CCCeECCCCCcccCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.9e-11  Score=57.27  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=29.2

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      .|+++ |+++++|.|..|++.|...+.|..|++.|.+ +++|.|
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~~   43 (44)
T 2epv_A            2 SSGSS-GSGEKPYECNECGKAFIWKSLLIVHERTHAG-VSGPSS   43 (44)
T ss_dssp             CCCCC-CCCCCSEECSSSCCEESSHHHHHHHHGGGSS-CSCCCC
T ss_pred             CCCcc-cCCCcCeECCCCCcccCchHHHHHHHhHhcC-CCCCCC
Confidence            35666 7777777777777777777777777777776 666654

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.4e-11  Score=65.28  Aligned_cols=68  Identities=19%  Similarity=0.176  Sum_probs=60.3

Q ss_pred             ccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447           9 EFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus         9 ~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +..|..|+++ +.+++++.|..|++.|. ...|..|+ .+.+ .+++.|..|++.|.. ..|..|.+++++++
T Consensus         2 ~~~L~~H~~~-~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~-~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            2 SSGSSGHEET-ECPLRLAVCQHCDLELS-ILKLKEHE-DYCG-ARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCSCCCCC-CCCCCCEECSSSCCEEC-HHHHHHHH-HHHH-HCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             chHHHhhCcc-cCCCcccCCcccChHhh-HHHHHHHH-hHcC-CCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            4678899888 99999999999999995 88899999 8999 999999999998875 78999999988764

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.9e-12  Score=59.94  Aligned_cols=42  Identities=21%  Similarity=0.243  Sum_probs=39.0

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eoj_A            3 SGSSGTG-ENPYECCECGKVFSRKDQLVSHQKTHSGQSG-PSSG   44 (44)
T ss_dssp             SCCSSSS-CCSCEETTTTEECSSHHHHHHHHTTSSSSCS-CCCC
T ss_pred             CccccCC-CcCeeCCCCCCccCCHHHHHHHHHHcCCCCC-CCCC
Confidence            5678888 9999999999999999999999999999998 9985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.3e-12  Score=58.96  Aligned_cols=41  Identities=32%  Similarity=0.406  Sum_probs=37.8

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   86 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C   86 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2en2_A            2 SSGSSGG-EKPYKCETCGARFVQVAHLRAHVLIHTGSGP-SSG   42 (42)
T ss_dssp             CCCCCCS-SCSEECTTTCCEESSHHHHHHHTHHHHSCCS-SCC
T ss_pred             CCcccCC-CCCEeCCCcChhhCCHHHHHHHHHHcCCCCC-CCC
Confidence            4567888 9999999999999999999999999999998 987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.2e-11  Score=58.59  Aligned_cols=42  Identities=14%  Similarity=0.154  Sum_probs=38.4

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|.
T Consensus         3 h~~~h~~-~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~   44 (44)
T 2eou_A            3 SGSSGAA-KTTSECQECGKIFRHSSLLIEHQALHAGESG-PSSG   44 (44)
T ss_dssp             CSCSCSS-SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC-CCCC
T ss_pred             CCCCCCC-CcCeECCCCCcccCCHHHHHHHHHHHCCCCC-CCCC
Confidence            4567888 9999999999999999999999999999998 9984

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.5e-11  Score=57.79  Aligned_cols=38  Identities=26%  Similarity=0.491  Sum_probs=26.7

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      |+++++|.|..|++.|.....|..|++.|.+ +++|.|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~-~k~~~C~   44 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTG-EKSGPSS   44 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSS-CCCCCSC
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCC-CCCCCCC
Confidence            6667777777777777777777777777776 6666664

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=7.3e-12  Score=59.96  Aligned_cols=41  Identities=15%  Similarity=0.123  Sum_probs=23.3

Q ss_pred             HHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC-CCCccccc
Q psy7447          45 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ-GPEMLSVK   87 (114)
Q Consensus        45 ~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~-~~p~~~C~   87 (114)
                      ++.|.+ +++|.|..|++.|.....|..|+++|++ ++| |.|.
T Consensus         4 ~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~-~~C~   45 (46)
T 2eoy_A            4 GSSGQK-EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS-GPSS   45 (46)
T ss_dssp             CCCCCC-SCCEECSSSCCEESSSHHHHHHHTTCCSCCTT-SSSC
T ss_pred             ccccCC-CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC-CCCC
Confidence            344455 5555555565566655666666665555 555 6554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.4e-12  Score=59.71  Aligned_cols=42  Identities=17%  Similarity=0.238  Sum_probs=39.2

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (46)
T 2en3_A            3 SGSSGTG-EKPFQCKECGMNFSWSCSLFKHLRSHERTDP-SGPS   44 (46)
T ss_dssp             CCCCSCC-CCSEECSSSCCEESSSHHHHHHHHHHHHSCC-SSCS
T ss_pred             cccccCC-CCCeeCcccChhhCCHHHHHHHHHHhCCCCC-CCCC
Confidence            5678888 9999999999999999999999999999998 9986

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.3e-11  Score=57.99  Aligned_cols=43  Identities=19%  Similarity=0.223  Sum_probs=25.9

Q ss_pred             cccCCCCCCceecC--cchhhcCCchHHHHHHHHhcCCCCCeeCCCC
Q psy7447          16 TLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRYQCPHC   60 (114)
Q Consensus        16 ~~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c   60 (114)
                      .++ |+++++|.|.  .|++.|.....|..|++.|.+ +++|.|..|
T Consensus         4 ~~~-H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~~C   48 (48)
T 2ent_A            4 GSS-GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG-VKPSGPSSG   48 (48)
T ss_dssp             CCS-SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCC-CCSCSSCCC
T ss_pred             CCC-cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCC-CCCCCCCCC
Confidence            344 5666666665  566666666666666666666 666666544

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=8.1e-12  Score=59.19  Aligned_cols=42  Identities=19%  Similarity=0.261  Sum_probs=38.9

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2emb_A            3 SGSSGHT-RKRYECSKCQATFNLRKHLIQHQKTHAAKSG-PSSG   44 (44)
T ss_dssp             CCSCCCC-CSSEECTTTCCEESCHHHHHHHGGGGCCCCC-TTCC
T ss_pred             cccccCC-CCCeECCCCCCccCCHHHHHHHHHHcCCCCC-cCCC
Confidence            5677888 9999999999999999999999999999998 9984

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7.2e-12  Score=59.38  Aligned_cols=42  Identities=19%  Similarity=0.268  Sum_probs=38.8

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|.
T Consensus         3 H~~~H~~-~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~C~   44 (44)
T 2eox_A            3 SGSSGTD-SKSYNCNECGKAFTRIFHLTRHQKIHTRKSG-PSSG   44 (44)
T ss_dssp             CCCCCCC-CCCEEETTTTEEESSSHHHHTTHHHHCCCCC-CSCC
T ss_pred             CCcCCCC-CCCeECcccCcccCCHHHHHHHHHHhCCCCC-CCCC
Confidence            5677888 9999999999999999999999999999998 9884

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.8e-12  Score=59.67  Aligned_cols=43  Identities=16%  Similarity=0.261  Sum_probs=39.1

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         3 h~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2enh_A            3 SGSSGTG-EKPYECDVCRKAFSHHASLTQHQRVHSGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCCC-SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCC-CCCCC
T ss_pred             CCCCcCC-CCCcCCCCcCchhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            4567888 9999999999999999999999999999998 99863

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=1.1e-11  Score=65.59  Aligned_cols=57  Identities=14%  Similarity=0.183  Sum_probs=49.2

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCcccc
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSI  106 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~~~~  106 (114)
                      +.+ +++|.|..|++.|.....|..|+++|+++++ |.|..|++.|........|...+
T Consensus        13 ~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~L~~H~~~H   69 (77)
T 2cot_A           13 QRE-RRRYKCDECGKSFSHSSDLSKHRRTHTGEKP-YKCDECGKAFIQRSHLIGHHRVH   69 (77)
T ss_dssp             CCC-SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS-EECSSSCCEESSHHHHHHHGGGS
T ss_pred             CCC-CCCEECCCCCcccCCHHHHHHHHHHcCCCcC-eeCCCCCCccCCHHHHHHHHHHh
Confidence            445 8899999999999999999999999999998 99999999999876655555443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.6e-12  Score=59.39  Aligned_cols=41  Identities=24%  Similarity=0.302  Sum_probs=38.0

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   86 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C   86 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2ytb_A            2 SSGSSGG-EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP-SSG   42 (42)
T ss_dssp             CCCCCCS-CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC-CCC
T ss_pred             CccccCC-CCCeeCCCccchhCCHHHHHHHHHHhCCCCC-CCC
Confidence            5677888 9999999999999999999999999999998 987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=6.9e-12  Score=58.85  Aligned_cols=41  Identities=27%  Similarity=0.339  Sum_probs=37.7

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   86 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C   86 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|
T Consensus         2 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~-~~C   42 (42)
T 2eos_A            2 SSGSSGG-EKPYPCEICGTRFRHLQTLKSHLRIHTGSGP-SSG   42 (42)
T ss_dssp             CCSCCSS-SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS-TTC
T ss_pred             CCcccCC-CCCEECCCCCCccCCHHHHHHHHHhcCCCCC-CCC
Confidence            4567888 9999999999999999999999999999998 987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=6.5e-11  Score=55.79  Aligned_cols=38  Identities=16%  Similarity=0.215  Sum_probs=20.8

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      |+++++|.|..|++.|.....|..|++.|++ +++|.|.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHS-DKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC-TTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCC-CCCccCC
Confidence            4555555555555555555555555555555 5555543

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.5e-11  Score=58.34  Aligned_cols=42  Identities=21%  Similarity=0.176  Sum_probs=38.5

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK   87 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~   87 (114)
                      |++.|.+ +++|.|..|++.|...+.|..|+++|++++| |.|.
T Consensus         3 H~~~H~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~~g   44 (44)
T 2epv_A            3 SGSSGSG-EKPYECNECGKAFIWKSLLIVHERTHAGVSG-PSSG   44 (44)
T ss_dssp             CCCCCCC-CCSEECSSSCCEESSHHHHHHHHGGGSSCSC-CCCC
T ss_pred             CCcccCC-CcCeECCCCCcccCchHHHHHHHhHhcCCCC-CCCC
Confidence            5678888 9999999999999999999999999999998 8773

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=9.7e-12  Score=59.43  Aligned_cols=43  Identities=23%  Similarity=0.312  Sum_probs=39.6

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         3 H~~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eq3_A            3 SGSSGTG-EKPYECNQCGKAFSVRSSLTTHQAIHTGKKP-SGPSS   45 (46)
T ss_dssp             CCCSSCC-CCSSEETTTTEECSSHHHHHHHHTTSCCCCC-CCSCC
T ss_pred             cccCCCC-CCCeECCCCChhhCCHHHHHHHHHHhCCCCC-CCCCC
Confidence            5677888 9999999999999999999999999999998 99963

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.7e-11  Score=57.45  Aligned_cols=42  Identities=17%  Similarity=0.138  Sum_probs=38.3

Q ss_pred             HHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          45 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        45 ~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      ++.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..
T Consensus         4 ~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (46)
T 2eom_A            4 GSSGHG-ERGHRCSDCGKFFLQASNFIQHRRIHTGEKP-SGPSS   45 (46)
T ss_dssp             CCCCCC-CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCC-SSCCC
T ss_pred             CCCCCC-CCCcCCCCCCCeeCChHHHHHHHHHhCCCCC-CCCCC
Confidence            456778 9999999999999999999999999999998 99974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.12  E-value=3.5e-11  Score=59.54  Aligned_cols=48  Identities=19%  Similarity=0.050  Sum_probs=43.3

Q ss_pred             ccCccCCCCccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCe
Q psy7447           6 RFSEFNLPPHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRY   55 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~   55 (114)
                      +....+|..|+++ |+++++|.|..|++.|...+.|..|++.|++ +++|
T Consensus         6 ~~~~~~l~~h~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   53 (54)
T 1yui_A            6 AKHPPGTEKPRSR-SQSEQPATCPICYAVIRQSRNLRRHLELRHF-AKPG   53 (54)
T ss_dssp             CSCSSCCCCCHHH-HTSSCCEECTTTCCEESSHHHHHHHHHHHTT-TSCC
T ss_pred             cCCCcchhhHHHh-cCCCCCccCCCCCcccCCHHHHHHHHHHhcc-CCCC
Confidence            4456778889998 9999999999999999999999999999999 8876

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=58.87  Aligned_cols=43  Identities=16%  Similarity=0.230  Sum_probs=39.4

Q ss_pred             HHHhcCCCCCeeCC--CCCcccCCchHHHHHHHHhcCCCCcccccCC
Q psy7447          45 RTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQ   89 (114)
Q Consensus        45 ~~~h~~~~k~~~C~--~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C   89 (114)
                      .+.|.+ +++|.|.  .|++.|.....|..|+++|++++| |.|..|
T Consensus         4 ~~~H~~-~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~C   48 (48)
T 2ent_A            4 GSSGTG-EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP-SGPSSG   48 (48)
T ss_dssp             CCSSCC-CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS-CSSCCC
T ss_pred             CCCcCC-CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC-CCCCCC
Confidence            456788 9999998  899999999999999999999998 999987

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=6.4e-11  Score=55.81  Aligned_cols=40  Identities=20%  Similarity=0.310  Sum_probs=36.8

Q ss_pred             HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          47 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      .|.+ +++|.|..|++.|.....|..|+++|++++| |.|.+
T Consensus         4 ~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C~~   43 (43)
T 2yrm_A            4 GSSG-NGAFFCNECDCRFSEEASLKRHTLQTHSDKS-GPSSG   43 (43)
T ss_dssp             CCSS-SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTC-SSSCC
T ss_pred             CcCC-CCCEECCCCCCeeCChHHHHHHHHhhCCCCC-ccCCC
Confidence            4677 8999999999999999999999999999998 99964

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=7.4e-11  Score=56.32  Aligned_cols=44  Identities=11%  Similarity=0.203  Sum_probs=38.8

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      .|+++ |+++++|.|..|++.|.....|..|++.|.+.+++|.|.
T Consensus         2 ~H~~~-H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSS-GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCC-CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccc-cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47888 999999999999999999999999999987524688875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=1e-10  Score=54.45  Aligned_cols=37  Identities=30%  Similarity=0.469  Sum_probs=23.7

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      |+++++|.|..|++.|.....|..|++.|.+ +++|.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTG-SGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCC-CSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCC-CCCcCC
Confidence            5566666666666666666666666666666 666554

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=2.6e-11  Score=63.43  Aligned_cols=51  Identities=18%  Similarity=0.256  Sum_probs=45.2

Q ss_pred             HhcCCCCCeeCC--CCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccccc
Q psy7447          47 LECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQ   99 (114)
Q Consensus        47 ~h~~~~k~~~C~--~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~   99 (114)
                      .+.+ .++|.|.  .|++.|.....|..|+++|+++++ |.|..|++.|......
T Consensus        13 ~~~~-~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~-~~C~~C~~~f~~~~~l   65 (73)
T 1f2i_G           13 VVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP-FQCRICMRNFSRSDHL   65 (73)
T ss_dssp             CCCC-CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC-EECTTTCCEESCHHHH
T ss_pred             cCCC-CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC-eECCCCCchhCCHHHH
Confidence            4566 8999997  599999999999999999999998 9999999999876543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=1.9e-11  Score=66.66  Aligned_cols=60  Identities=13%  Similarity=0.127  Sum_probs=42.7

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      .+.++ |+++++|.|..|++.|.....|..|++.|++ +++|.|..|..    ...+..|.+++.+
T Consensus        15 ~~~~~-H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~-ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           15 LGNGP-RLQNSTYQCKHCDSKLQSTAELTSHLNIHNE-EFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCS-CCCCSCEECSSSCCEESSHHHHHHHHHHHHH-HHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccccc-cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCC-CCCcccchhhh----HHHHHhhhccccc
Confidence            33444 7888888888888888888888888888888 88888876543    2333345555655

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.8e-11  Score=57.59  Aligned_cols=42  Identities=21%  Similarity=0.309  Sum_probs=37.9

Q ss_pred             HHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          45 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        45 ~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      .+.|.+ +++|.|..|++.|.....|..|+++|++++| |.|+.
T Consensus         4 ~~~h~~-~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~~C~~   45 (45)
T 2epu_A            4 GSSGTG-QKPFECTHCGKSFRAKGNLVTHQRIHTGEKS-GPSSG   45 (45)
T ss_dssp             CCCCCS-CCSEEETTTTEEESSHHHHHHHHTTTSSCCC-CCSCC
T ss_pred             CCCCCC-CcCccCCCCCCccCChHHHHHHHHHhCCCCC-CCCCC
Confidence            356778 9999999999999999999999999999998 99963

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.05  E-value=6e-11  Score=66.37  Aligned_cols=53  Identities=11%  Similarity=0.098  Sum_probs=45.1

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHH-h---cCCCCcccccCCCcccccccccCCC
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAI-K---HQGPEMLSVKHQGPEMLSIKHQGPE  102 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~-~---~~~~p~~~C~~C~~~f~~~~~~~~~  102 (114)
                      -.| +++|.|..|++.|...+.|..|++. |   .+++| |.|..||+.|........|
T Consensus        13 ~~g-ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekp-f~C~~Cgk~F~~~~~L~~H   69 (102)
T 2ghf_A           13 KKV-EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSS-YVCVECNFLTKRYDALSEH   69 (102)
T ss_dssp             CCC-CSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCC-EEETTTTEEESSTHHHHTH
T ss_pred             CCC-CcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCC-cCCCCCCcccCCHHHHHHH
Confidence            456 8999999999999999999999984 7   45666 9999999999877665555

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=7.1e-11  Score=54.99  Aligned_cols=38  Identities=26%  Similarity=0.306  Sum_probs=35.4

Q ss_pred             HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccc
Q psy7447          47 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   86 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C   86 (114)
                      .|.+ +++|.|..|++.|.....|..|+++|++++| |.|
T Consensus         4 ~h~~-~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~C   41 (41)
T 2ept_A            4 GSSG-QRVYECQECGKSFRQKGSLTLHERIHTGSGP-SSG   41 (41)
T ss_dssp             SCCC-CCCEECSSSCCEESSHHHHHHHGGGCCCCSC-SCC
T ss_pred             ccCC-CCCeECCCCCCCcCCHHHHHHHHHHhCCCCC-cCC
Confidence            5677 8999999999999999999999999999998 987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.4e-10  Score=59.59  Aligned_cols=50  Identities=8%  Similarity=0.028  Sum_probs=43.8

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCccccc-CCCcccccccccCCCcc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVK-HQGPEMLSIKHQGPETL  104 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~-~C~~~f~~~~~~~~~~~  104 (114)
                      .++|.|..|++.|. ...|..|+++ ++++| |.|. .|++.|........|..
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p-~~C~~~C~k~f~~~~~L~~H~~   58 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLP-VACPNQCGVGTVAREDLPGHLK   58 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSE-EECTTCCSCCEEETTTHHHHHH
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcC-ccCCcccCcccccHHHHHHHHH
Confidence            78999999999999 9999999999 88888 9999 99999997766555543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.93  E-value=1e-09  Score=50.43  Aligned_cols=34  Identities=15%  Similarity=0.299  Sum_probs=20.3

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSV   86 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C   86 (114)
                      +++|.|..|++.|...+.|..|+++|++++| |.+
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~-~~~   37 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA-RLR   37 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT-TTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCcc-cee
Confidence            5556666666666666666666666666555 543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.92  E-value=1.1e-09  Score=49.58  Aligned_cols=35  Identities=17%  Similarity=0.184  Sum_probs=27.1

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++ |++++||.|..|++.|.....|..|++.|.+
T Consensus         2 H~~~-h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRG-STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSST-TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCc-CCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            5666 7778888888888888888888888777765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.1e-09  Score=49.60  Aligned_cols=31  Identities=19%  Similarity=0.305  Sum_probs=19.9

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++++|.|..|++.|.....|..|++.|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            5566666666666666666666666666655

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.91  E-value=7.4e-10  Score=50.87  Aligned_cols=37  Identities=16%  Similarity=0.285  Sum_probs=33.4

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcCCCCCeeC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQC   57 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C   57 (114)
                      |+++++|.|..|++.|...+.|..|++.|.+ +++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRR-DRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCC-SCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCC-Ccccee
Confidence            5678999999999999999999999999999 888765

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=2.1e-10  Score=62.48  Aligned_cols=59  Identities=19%  Similarity=0.268  Sum_probs=49.3

Q ss_pred             HHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCccc
Q psy7447          45 RTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLS  105 (114)
Q Consensus        45 ~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~~~  105 (114)
                      .+.|.+ +++|.|..|++.|.....|..|+++|++++| |.|..|.+....+..+..+...
T Consensus        17 ~~~H~~-~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp-~~C~~~~~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           17 NGPRLQ-NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ-KRAKRQERRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCCC-CSCEECSSSCCEESSHHHHHHHHHHHHHHHH-HHCCCCSCCCCCCCCCCCCCCS
T ss_pred             ccccCC-CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC-cccchhhhHHHHHhhhcccccc
Confidence            445778 9999999999999999999999999999998 9999988766666665554443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=7.1e-10  Score=50.24  Aligned_cols=36  Identities=19%  Similarity=0.409  Sum_probs=32.7

Q ss_pred             HHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          46 TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        46 ~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      +.|.+ +++|.|..|++.|...+.|..|+++|++++|
T Consensus         2 ~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSS-GRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCC-CCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCC-CCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45778 8999999999999999999999999999875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.88  E-value=3.4e-10  Score=61.92  Aligned_cols=52  Identities=21%  Similarity=0.206  Sum_probs=45.4

Q ss_pred             ccCccCCCCccccCCCCCCc--------eecCcchhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447           6 RFSEFNLPPHTLFNPLLQFR--------YTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus         6 ~~~~~~l~~h~~~~h~~~k~--------~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      +.+..+|..|+++.|.++++        |.|..|++.|.....|..|+++|++ +++|.|.
T Consensus        35 f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~-~k~~~C~   94 (95)
T 2ej4_A           35 FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG-EKSGPSS   94 (95)
T ss_dssp             CSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT-CCCCSSC
T ss_pred             cCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC-CCCCCCC
Confidence            44566778888876888877        9999999999999999999999999 9999986

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.87  E-value=7.5e-10  Score=57.62  Aligned_cols=46  Identities=17%  Similarity=0.190  Sum_probs=41.8

Q ss_pred             CCCeeCCC--CCcccCCchHHHHHHHHhcCCCCcccccC--CCcccccccc
Q psy7447          52 EPRYQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVKH--QGPEMLSIKH   98 (114)
Q Consensus        52 ~k~~~C~~--c~~~~~~~~~l~~h~~~~~~~~p~~~C~~--C~~~f~~~~~   98 (114)
                      .++|.|..  |++.|.....|..|+++|++++| |.|.+  |++.|.....
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~-~~C~~~~C~k~f~~~~~   64 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP-FSCSWKGCERRFARSDE   64 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS-EECCCTTCCCEESSHHH
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCC-ccCCCCCCCcccCCHHH
Confidence            78899988  99999999999999999999998 99975  9999986644

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.83  E-value=4.3e-09  Score=46.53  Aligned_cols=32  Identities=28%  Similarity=0.568  Sum_probs=22.0

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcCCCCccc
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLS   85 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~   85 (114)
                      +||.|..|++.|...+.|..|+++|++++| |.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~-~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE-ER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC-CC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC-CC
Confidence            356677777777777777777777777666 53

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.83  E-value=3.8e-09  Score=47.12  Aligned_cols=31  Identities=16%  Similarity=0.294  Sum_probs=20.6

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++++|.|..|++.|...+.|..|++.|.+
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            5566666666666666666666666666665

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=3.3e-09  Score=54.86  Aligned_cols=35  Identities=20%  Similarity=0.229  Sum_probs=18.0

Q ss_pred             CCCeeCCC--CCcccCCchHHHHHH-HHhcCCCCccccc
Q psy7447          52 EPRYQCPH--CPYRGKQKVHLKTHV-AIKHQGPEMLSVK   87 (114)
Q Consensus        52 ~k~~~C~~--c~~~~~~~~~l~~h~-~~~~~~~p~~~C~   87 (114)
                      +|||.|..  |+++|...++|..|+ ++|++++| |-|.
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP-~~~~   62 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP-AFSA   62 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC-CCCC
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC-cccc
Confidence            55555532  555555555555554 34555555 4443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.82  E-value=3.8e-09  Score=47.04  Aligned_cols=31  Identities=23%  Similarity=0.223  Sum_probs=16.9

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++++|.|..|++.|...+.|..|++.|.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            4455555555555555555555555555544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.81  E-value=3.3e-09  Score=47.23  Aligned_cols=34  Identities=21%  Similarity=0.485  Sum_probs=31.1

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      |.+ +++|.|..|++.|...+.|..|+++|++++|
T Consensus         2 h~~-~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSG-SSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCC-CCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCC-CCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            566 8999999999999999999999999998765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=4.3e-09  Score=54.43  Aligned_cols=39  Identities=13%  Similarity=0.188  Sum_probs=35.2

Q ss_pred             CCCCCceecCc--chhhcCCchHHHHHH-HHhcCCCCCeeCCC
Q psy7447          20 PLLQFRYTCDS--CGKVYKLKRSLYRHR-TLECGKEPRYQCPH   59 (114)
Q Consensus        20 h~~~k~~~C~~--C~~~f~~~~~l~~h~-~~h~~~~k~~~C~~   59 (114)
                      .+++|||.|..  |++.|...++|..|+ ++|++ ++|+.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg-EKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS-DLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS-CCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC-CCCccccc
Confidence            57899999975  999999999999997 68999 99998864

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.79  E-value=1.9e-09  Score=48.79  Aligned_cols=36  Identities=22%  Similarity=0.286  Sum_probs=32.5

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      |++.|.+ +++|.|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCC-CCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            5677888 99999999999999999999999998874

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.76  E-value=4.8e-09  Score=46.78  Aligned_cols=34  Identities=15%  Similarity=0.303  Sum_probs=31.1

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      |.+ +++|.|..|++.|...+.|..|+++|++++|
T Consensus         2 H~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSG-KRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSC-CSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCC-CcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            567 8999999999999999999999999998765

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=6.9e-11  Score=61.54  Aligned_cols=59  Identities=8%  Similarity=0.068  Sum_probs=49.8

Q ss_pred             hHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCcccc
Q psy7447          39 RSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETLSI  106 (114)
Q Consensus        39 ~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~~~~  106 (114)
                      ..|..|++.|.+ +++|.|..|++.|.....|..       +++ |.|..|++.|........|...+
T Consensus         4 ~~l~~H~~~h~~-~~~~~C~~C~k~f~~~~~l~~-------~~~-~~C~~C~~~f~~~~~l~~H~~~H   62 (73)
T 2ctu_A            4 GSSGKRQKIHLG-DRSQKCSKCGIIFIRRSTLSR-------RKT-PMCEKCRKDSCQEAALNKDEGNE   62 (73)
T ss_dssp             CSCCCCCCCCCC-CSEEECSSSCCEEECCCCCCC-------SSS-CCCHHHHHTCSCCCSSCCCSSCC
T ss_pred             hhHHHHHHHhCC-CCCeeCCcccchhCCHHHhCc-------CCC-CCCCCCChhhcCHHHHHHHHHhh
Confidence            456678888999 999999999999999888865       566 99999999999888877776654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=9e-09  Score=46.61  Aligned_cols=31  Identities=23%  Similarity=0.252  Sum_probs=23.0

Q ss_pred             CCCCCceecCcchhhcCCchHHHHH-HHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRH-RTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h-~~~h~~   50 (114)
                      |++++||.|..|++.|...+.|..| ++.|++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            6777777777777777777777777 666655

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.7e-08  Score=45.14  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=19.5

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++++|.|..|++.|.....|..|++.|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            5556666666666666666666666666654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.8e-08  Score=45.46  Aligned_cols=31  Identities=19%  Similarity=0.195  Sum_probs=19.9

Q ss_pred             CCCCCceecCcchhhcCCc-hHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLK-RSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~-~~l~~h~~~h~~   50 (114)
                      |+++++|.|..|++.|... +.|..|++.|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            5566666666666666666 666666666654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.70  E-value=1.4e-08  Score=44.84  Aligned_cols=32  Identities=22%  Similarity=0.411  Sum_probs=29.5

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCCCee
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQ   56 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~   56 (114)
                      +||.|..|++.|...+.|..|++.|++ ++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~-~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHEL-LGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTT-TCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCC-CCCCC
Confidence            589999999999999999999999999 88764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=1.7e-08  Score=45.76  Aligned_cols=31  Identities=19%  Similarity=0.329  Sum_probs=17.0

Q ss_pred             CCCeeCC--CCCcccCCchHHHHHHHHhcCCCC
Q psy7447          52 EPRYQCP--HCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        52 ~k~~~C~--~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      +++|.|.  .|++.|...+.|..|+++|++++|
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            4555555  355555555555555555555554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=2.1e-08  Score=46.00  Aligned_cols=31  Identities=16%  Similarity=0.171  Sum_probs=16.9

Q ss_pred             CCCCCceecCc--chhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDS--CGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +++++||.|..  |++.|...+.|..|+++|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            34555555543  55555555555555555554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=2.1e-08  Score=45.49  Aligned_cols=35  Identities=14%  Similarity=0.285  Sum_probs=31.8

Q ss_pred             CCCCCceecC--cchhhcCCchHHHHHHHHhcCCCCCe
Q psy7447          20 PLLQFRYTCD--SCGKVYKLKRSLYRHRTLECGKEPRY   55 (114)
Q Consensus        20 h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~k~~   55 (114)
                      |+++++|.|.  .|++.|...+.|..|++.|.+ +++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~-~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM-TLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT-TTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC-CCCC
Confidence            5688999999  599999999999999999999 7765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=2.1e-08  Score=46.02  Aligned_cols=33  Identities=21%  Similarity=0.469  Sum_probs=29.5

Q ss_pred             hcCCCCCeeCCC--CCcccCCchHHHHHHHHhcCCC
Q psy7447          48 ECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        48 h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +.+ ++||.|..  |+++|...+.|..|+++|+++.
T Consensus         4 ~~g-ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSS-GILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSC-CCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCC-CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            456 89999986  9999999999999999999863

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=2.5e-08  Score=44.54  Aligned_cols=31  Identities=32%  Similarity=0.474  Sum_probs=19.0

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++++|.|..|++.|.....|..|++.|++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            4555666666666666666666666666554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.7e-08  Score=45.52  Aligned_cols=34  Identities=15%  Similarity=0.284  Sum_probs=30.7

Q ss_pred             HhcCCCCCeeCCCCCcccCCc-hHHHHHHHHhcCCC
Q psy7447          47 LECGKEPRYQCPHCPYRGKQK-VHLKTHVAIKHQGP   81 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~-~~l~~h~~~~~~~~   81 (114)
                      +|.+ +++|.|..|++.|... +.|..|+++|++++
T Consensus         3 ~h~~-~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSS-GRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCC-CCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCC-CCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            4677 8999999999999999 99999999998864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=2.1e-08  Score=44.89  Aligned_cols=31  Identities=16%  Similarity=0.203  Sum_probs=19.1

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++++|.|..|++.|.....|..|++.|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            5556666666666666666666666665554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=2.4e-08  Score=44.64  Aligned_cols=34  Identities=24%  Similarity=0.534  Sum_probs=30.6

Q ss_pred             HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          47 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      .|.+ +++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSS-GKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCC-CCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCC-CCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            3667 899999999999999999999999998864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2e-08  Score=45.01  Aligned_cols=31  Identities=19%  Similarity=0.328  Sum_probs=20.1

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++++|.|..|++.|...+.|..|++.|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            5566666666666666666666666666654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=3.9e-08  Score=44.00  Aligned_cols=31  Identities=32%  Similarity=0.545  Sum_probs=17.4

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |.++++|.|..|++.|.....|..|++.|.+
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            4455555555555555555555555555544

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=2.8e-08  Score=44.47  Aligned_cols=34  Identities=21%  Similarity=0.462  Sum_probs=30.4

Q ss_pred             HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          47 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      .|.+ +++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSS-GKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCC-CCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCC-CCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            3567 899999999999999999999999998764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=3.7e-08  Score=44.00  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=30.0

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      |.+ +++|.|..|++.|.....|..|+++|++++
T Consensus         4 h~~-~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSS-GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCC-CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCC-CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            566 889999999999999999999999998864

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=5.2e-08  Score=43.56  Aligned_cols=33  Identities=21%  Similarity=0.300  Sum_probs=29.8

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +.+ +++|.|..|++.|.....|..|+++|++++
T Consensus         4 ~~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSS-GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSC-CCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCC-CCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            456 899999999999999999999999998864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.4e-08  Score=45.96  Aligned_cols=34  Identities=24%  Similarity=0.399  Sum_probs=30.3

Q ss_pred             HHhcCCCCCeeCCCCCcccCCchHHHHH-HHHhcCC
Q psy7447          46 TLECGKEPRYQCPHCPYRGKQKVHLKTH-VAIKHQG   80 (114)
Q Consensus        46 ~~h~~~~k~~~C~~c~~~~~~~~~l~~h-~~~~~~~   80 (114)
                      +.|.+ ++||.|..|++.|...+.|..| +++|+++
T Consensus         2 ~~H~~-~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSS-GHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSS-SCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCC-CcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            45778 8999999999999999999999 8888764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=2e-08  Score=45.01  Aligned_cols=34  Identities=15%  Similarity=0.245  Sum_probs=30.2

Q ss_pred             HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          47 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      .|.+ +++|.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~-~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSS-GLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCC-CCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCC-CCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3567 899999999999999999999999998763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=2e-09  Score=56.85  Aligned_cols=60  Identities=20%  Similarity=0.214  Sum_probs=49.4

Q ss_pred             HHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccCCCcc
Q psy7447          40 SLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQGPETL  104 (114)
Q Consensus        40 ~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~~~~~  104 (114)
                      .|..|++.+.+ .+++.|..|+..|. ...|..|. .+.+++| +.|+.|++.|. ......|..
T Consensus         4 ~L~~H~~~~c~-~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~-~~C~~C~~~~~-~~~l~~H~~   63 (75)
T 2d9k_A            4 GSSGHEETECP-LRLAVCQHCDLELS-ILKLKEHE-DYCGART-ELCGNCGRNVL-VKDLKTHPE   63 (75)
T ss_dssp             CCSCCCCCCCC-CCCEECSSSCCEEC-HHHHHHHH-HHHHHCE-EECSSSCCEEE-TTGGGTHHH
T ss_pred             HHHhhCcccCC-CcccCCcccChHhh-HHHHHHHH-hHcCCCc-eEcccCCCcCc-HHHHHHHHH
Confidence            45567788888 99999999999995 78999999 8999998 99999999876 455555543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.56  E-value=3.1e-08  Score=47.54  Aligned_cols=31  Identities=32%  Similarity=0.481  Sum_probs=18.4

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHH-HhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRT-LECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~   50 (114)
                      |+++++|.|..|++.|.....|..|++ .|.+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            555566666666666666666666655 5554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.56  E-value=3.1e-08  Score=47.27  Aligned_cols=35  Identities=14%  Similarity=0.289  Sum_probs=23.8

Q ss_pred             ccccCCCCCCceecC--cchhhcCCchHHHHHHHHhcC
Q psy7447          15 HTLFNPLLQFRYTCD--SCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        15 h~~~~h~~~k~~~C~--~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +... |+++++|.|.  .|++.|...+.|..|++.|++
T Consensus         9 ~~~~-H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            9 KYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHhc-cCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            3444 6677777774  577777777777777777765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.55  E-value=3.4e-08  Score=47.40  Aligned_cols=34  Identities=29%  Similarity=0.366  Sum_probs=29.2

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHH-HhcCCCC
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPE   82 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~-~~~~~~p   82 (114)
                      |++ +++|.|..|++.|.....|..|++ +|+++.+
T Consensus         2 Ht~-~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDR-DKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTT-TSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCC-CcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            667 899999999999999999999999 9988766

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.51  E-value=1.3e-07  Score=40.08  Aligned_cols=28  Identities=39%  Similarity=0.797  Sum_probs=18.1

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +|.|..|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4566666666666666666666666554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=2.1e-07  Score=47.79  Aligned_cols=30  Identities=23%  Similarity=0.297  Sum_probs=15.3

Q ss_pred             CCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          21 LLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        21 ~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      .+++||.|..|++.|.....|..|+++|++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg   38 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGV   38 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence            344555555555555555555555555544

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.51  E-value=9.3e-08  Score=43.11  Aligned_cols=31  Identities=32%  Similarity=0.518  Sum_probs=19.1

Q ss_pred             CCCCCceecCc--chhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDS--CGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++++|.|..  |++.|...+.|..|++.|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            45566666653  66666666666666666655

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.50  E-value=4.2e-08  Score=44.41  Aligned_cols=23  Identities=22%  Similarity=0.418  Sum_probs=14.3

Q ss_pred             CCCeeCCCCCcccCCchHHHHHH
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHV   74 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~   74 (114)
                      ++||.|..|+++|.+.++|..|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            55666666666666666666665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.47  E-value=1.9e-07  Score=39.34  Aligned_cols=27  Identities=22%  Similarity=0.406  Sum_probs=16.2

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +|.|..|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455666666666666666666665554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.47  E-value=1.4e-07  Score=39.97  Aligned_cols=28  Identities=18%  Similarity=0.300  Sum_probs=15.3

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      ++|.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3455555555555555555555555443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.47  E-value=1.3e-07  Score=42.58  Aligned_cols=33  Identities=15%  Similarity=0.206  Sum_probs=29.4

Q ss_pred             hcCCCCCeeCCC--CCcccCCchHHHHHHHHhcCCC
Q psy7447          48 ECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        48 h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      |++ +++|.|..  |++.|...+.|..|+++|++++
T Consensus         3 ~~~-~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGK-KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSS-CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCC-CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            456 89999984  9999999999999999998864

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.47  E-value=1.3e-07  Score=39.96  Aligned_cols=27  Identities=30%  Similarity=0.753  Sum_probs=14.2

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +|.|..|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.46  E-value=2.2e-08  Score=47.80  Aligned_cols=38  Identities=13%  Similarity=0.357  Sum_probs=32.9

Q ss_pred             HHHHHhcCCCCCeeCC--CCCcccCCchHHHHHHHHhcCCC
Q psy7447          43 RHRTLECGKEPRYQCP--HCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        43 ~h~~~h~~~~k~~~C~--~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      .+...|.+ +++|.|.  .|++.|...+.|..|+++|++++
T Consensus         8 ~~~~~H~~-~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMP-DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEET-TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCC-CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34456888 9999996  79999999999999999999864

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=1.9e-07  Score=39.21  Aligned_cols=27  Identities=33%  Similarity=0.596  Sum_probs=15.6

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555666666555666666555543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.42  E-value=2.2e-07  Score=39.09  Aligned_cols=27  Identities=22%  Similarity=0.379  Sum_probs=15.4

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            455555555555555555555555543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.40  E-value=5.1e-09  Score=45.93  Aligned_cols=29  Identities=24%  Similarity=0.465  Sum_probs=16.0

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      ||.|..|++.|...+.|..|+++|++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            45555555555555555555555555544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.39  E-value=2e-07  Score=39.51  Aligned_cols=28  Identities=29%  Similarity=0.479  Sum_probs=26.0

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            4789999999999999999999999887

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.39  E-value=2.3e-07  Score=39.11  Aligned_cols=27  Identities=22%  Similarity=0.503  Sum_probs=25.4

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            589999999999999999999999987

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=2.7e-07  Score=47.37  Aligned_cols=43  Identities=12%  Similarity=-0.038  Sum_probs=35.3

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccc
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEM   93 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f   93 (114)
                      +.+ ++||.|..|++.|.....|..|+++|+++..  .+..++...
T Consensus         8 ~~~-ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~--~~~~~~~~~   50 (66)
T 2epp_A            8 LRE-AGILPCGLCGKVFTDANRLRQHEAQHGVTSL--QLGYIDLPP   50 (66)
T ss_dssp             CCC-CCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC--CCCSCCCCC
T ss_pred             CCC-ccCcCCCCCCCccCCHHHHHhhhhhhCCCcc--ccccccCCC
Confidence            445 8999999999999999999999999998754  556655433

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=3.9e-07  Score=39.40  Aligned_cols=28  Identities=18%  Similarity=0.284  Sum_probs=14.7

Q ss_pred             CCeeCC--CCCcccCCchHHHHHHHHhcCC
Q psy7447          53 PRYQCP--HCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        53 k~~~C~--~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      ++|.|.  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            345555  4555555555555555555443

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.35  E-value=2.9e-07  Score=39.54  Aligned_cols=27  Identities=19%  Similarity=0.322  Sum_probs=15.3

Q ss_pred             CeeCC--CCCcccCCchHHHHHHHHhcCC
Q psy7447          54 RYQCP--HCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        54 ~~~C~--~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      ||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555665555565565555543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.35  E-value=3.8e-07  Score=38.34  Aligned_cols=27  Identities=19%  Similarity=0.508  Sum_probs=25.2

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ++|.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            579999999999999999999999987

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.33  E-value=2.7e-07  Score=38.33  Aligned_cols=24  Identities=13%  Similarity=0.307  Sum_probs=11.5

Q ss_pred             CceecCcchhhcCCchHHHHHHHH
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTL   47 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~   47 (114)
                      +||.|..|++.|...+.|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            344444455444444444444443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.33  E-value=2.3e-07  Score=38.83  Aligned_cols=25  Identities=32%  Similarity=0.731  Sum_probs=12.4

Q ss_pred             CceecCcchhhcCCchHHHHHHHHh
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h   48 (114)
                      ++|.|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555554443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=4e-07  Score=38.23  Aligned_cols=27  Identities=30%  Similarity=0.608  Sum_probs=25.4

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ++|.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            579999999999999999999999987

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.32  E-value=5e-07  Score=38.16  Aligned_cols=29  Identities=17%  Similarity=0.229  Sum_probs=26.2

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEP   53 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k   53 (114)
                      ++|.|..|++.|...+.|..|++.|.+ ++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~-~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS-KE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS-SC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc-CC
Confidence            579999999999999999999999987 54

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=4.5e-07  Score=37.99  Aligned_cols=27  Identities=19%  Similarity=0.359  Sum_probs=25.3

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +||.|..|++.|.....|..|++.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            589999999999999999999999987

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.31  E-value=4.6e-07  Score=37.62  Aligned_cols=27  Identities=22%  Similarity=0.583  Sum_probs=24.3

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      +++|.|..|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999998864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=5.4e-07  Score=38.92  Aligned_cols=28  Identities=29%  Similarity=0.627  Sum_probs=26.0

Q ss_pred             CCceecC--cchhhcCCchHHHHHHHHhcC
Q psy7447          23 QFRYTCD--SCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        23 ~k~~~C~--~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ++||.|.  .|++.|...+.|..|++.|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            4789999  899999999999999999987

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.65  E-value=7.6e-08  Score=40.76  Aligned_cols=26  Identities=27%  Similarity=0.278  Sum_probs=13.1

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +|.|..|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            34455555555555555555554444

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.31  E-value=1.3e-08  Score=44.58  Aligned_cols=31  Identities=16%  Similarity=0.358  Sum_probs=28.2

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCCCe
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRY   55 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~   55 (114)
                      +||.|..|++.|...+.|..|++.|++ ++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~-~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFI-VVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSS-SSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHcc-CCCC
Confidence            579999999999999999999999998 7765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.31  E-value=3.2e-07  Score=38.38  Aligned_cols=28  Identities=25%  Similarity=0.424  Sum_probs=25.0

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +++|.|..|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3689999999999999999999988764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.30  E-value=3.4e-07  Score=41.34  Aligned_cols=27  Identities=26%  Similarity=0.530  Sum_probs=24.8

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHH
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      +.+++||.|..|++.|...++|..|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCC
Confidence            468999999999999999999999983

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=2.3e-07  Score=38.70  Aligned_cols=25  Identities=20%  Similarity=0.226  Sum_probs=13.3

Q ss_pred             CceecCcchhhcCCchHHHHHHHHh
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h   48 (114)
                      +||.|..|++.|...+.|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4555555555555555555555443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.59  E-value=1.1e-07  Score=40.46  Aligned_cols=26  Identities=31%  Similarity=0.505  Sum_probs=12.4

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +|.|..|++.|.....|..|+++|++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            44444444444444444444444443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.24  E-value=5.2e-07  Score=38.23  Aligned_cols=26  Identities=23%  Similarity=0.344  Sum_probs=13.2

Q ss_pred             CeeCCCCCcccCCchHHHHH-HHHhcC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTH-VAIKHQ   79 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h-~~~~~~   79 (114)
                      +|.|..|++.|...+.|..| +++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            44555555555555555555 344444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.23  E-value=3.9e-07  Score=37.95  Aligned_cols=27  Identities=19%  Similarity=0.452  Sum_probs=23.8

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      +++|.|..|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999988763

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.23  E-value=6.7e-07  Score=38.36  Aligned_cols=27  Identities=30%  Similarity=0.655  Sum_probs=25.1

Q ss_pred             CceecC--cchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCD--SCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~--~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +||.|.  .|++.|...+.|..|++.|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            578998  999999999999999999987

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.54  E-value=1.5e-07  Score=39.78  Aligned_cols=27  Identities=30%  Similarity=0.501  Sum_probs=25.0

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +||.|..|++.|...+.|..|++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            579999999999999999999999876

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.22  E-value=5.2e-07  Score=37.30  Aligned_cols=24  Identities=29%  Similarity=0.667  Sum_probs=11.6

Q ss_pred             eecCcchhhcCCchHHHHHHHHhc
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTLEC   49 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~h~   49 (114)
                      |.|..|++.|.....|..|++.|.
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            444555555554444444444443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=1.7e-07  Score=39.81  Aligned_cols=28  Identities=25%  Similarity=0.502  Sum_probs=25.6

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ++||.|..|++.|.....|..|++.|.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            4789999999999999999999999876

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.16  E-value=8.8e-07  Score=37.49  Aligned_cols=27  Identities=26%  Similarity=0.710  Sum_probs=24.5

Q ss_pred             CceecCcchhhcCCchHHHHH-HHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRH-RTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h-~~~h~~   50 (114)
                      ++|.|..|++.|...+.|..| ++.|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            579999999999999999999 788876

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.14  E-value=1.1e-06  Score=36.25  Aligned_cols=27  Identities=22%  Similarity=0.423  Sum_probs=23.5

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +|.|..|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            578999999999999999999998763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.41  E-value=3.2e-07  Score=37.75  Aligned_cols=24  Identities=29%  Similarity=0.641  Sum_probs=12.5

Q ss_pred             ceecCcchhhcCCchHHHHHHHHh
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~~h   48 (114)
                      ||.|..|++.|...+.|..|++.|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            455555555555555555554443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=5e-07  Score=37.14  Aligned_cols=26  Identities=27%  Similarity=0.468  Sum_probs=22.0

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      +||.|..|++.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47889999999999999999988763

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.00  E-value=3e-06  Score=35.37  Aligned_cols=24  Identities=33%  Similarity=0.931  Sum_probs=11.5

Q ss_pred             ceecC--cchhhcCCchHHHHHHHHh
Q psy7447          25 RYTCD--SCGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        25 ~~~C~--~C~~~f~~~~~l~~h~~~h   48 (114)
                      +|.|.  .|++.|...+.|..|++.|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            34444  4555554444444444444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.00  E-value=3.3e-06  Score=35.24  Aligned_cols=27  Identities=22%  Similarity=0.384  Sum_probs=24.3

Q ss_pred             CCeeCC--CCCcccCCchHHHHHHHHhcC
Q psy7447          53 PRYQCP--HCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        53 k~~~C~--~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478999  999999999999999998864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.36  E-value=0.00052  Score=34.69  Aligned_cols=49  Identities=18%  Similarity=0.394  Sum_probs=38.4

Q ss_pred             CcchhhcCCchHHHHHHH-HhcCCCC------CeeCC--CCCcccCCchHHHHHHHHhc
Q psy7447          29 DSCGKVYKLKRSLYRHRT-LECGKEP------RYQCP--HCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        29 ~~C~~~f~~~~~l~~h~~-~h~~~~k------~~~C~--~c~~~~~~~~~l~~h~~~~~   78 (114)
                      ..|++.|.....|..|+. .|.+ .+      +|.|.  .|++.+.....|..|++..+
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~-~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVS-QDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCC-CCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCHHHHHHHHHhhccC-cccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            468899999999999974 6766 44      78886  68888887788888888653

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.85  E-value=0.00021  Score=40.87  Aligned_cols=27  Identities=15%  Similarity=0.082  Sum_probs=16.7

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHH
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      |+++++|.|..|++.|.....|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            555666666666666666666666654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.26  E-value=0.00069  Score=38.76  Aligned_cols=31  Identities=26%  Similarity=0.212  Sum_probs=26.7

Q ss_pred             HHhcCCCCCeeCCCCCcccCCchHHHHHHHHh
Q psy7447          46 TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        46 ~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~   77 (114)
                      ..++| .++|.|..|++.|.+.+.|..|.+..
T Consensus        43 ed~tG-ekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPG-GGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGG-GGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccCCC-CcceEcccCcchhCCHHHHHHHHhhh
Confidence            45677 89999999999999999999997643

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.28  E-value=0.028  Score=32.19  Aligned_cols=78  Identities=12%  Similarity=0.012  Sum_probs=44.2

Q ss_pred             CCceecCcchhhcCCchHHHHHH--HHhcCCCCCeeC------CCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccc
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHR--TLECGKEPRYQC------PHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~--~~h~~~~k~~~C------~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~   94 (114)
                      .+++.|..|...|.+.+.+..|.  +.|....+.+.+      ..-+..+....    +.....+... |.|..|+..|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~C~~C~~~f~  104 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRS-KCCPVCNMTFS  104 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTT-TEETTTTEECS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCC-eEcCCCCCEeC
Confidence            36789999999999988888887  344220011111      01112222111    1112233444 89999999999


Q ss_pred             cccccCCCccc
Q psy7447          95 SIKHQGPETLS  105 (114)
Q Consensus        95 ~~~~~~~~~~~  105 (114)
                      +......|-.+
T Consensus       105 s~~~~~~H~~g  115 (127)
T 1zu1_A          105 SPVVAESHYIG  115 (127)
T ss_dssp             SHHHHHHHHTS
T ss_pred             CHHHHHHHHCC
Confidence            88765555443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.80  E-value=0.054  Score=25.42  Aligned_cols=21  Identities=24%  Similarity=0.520  Sum_probs=11.3

Q ss_pred             eeCCCCCcccCCchHHHHHHH
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVA   75 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~   75 (114)
                      +.|+.|+..|.....|+.|++
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            445555555555555555555

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.01  E-value=0.017  Score=33.03  Aligned_cols=23  Identities=17%  Similarity=0.147  Sum_probs=20.5

Q ss_pred             CCCeeCCCCCcccCCchHHHHHH
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHV   74 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~   74 (114)
                      .+++.|.+|.-.|.+.+.+..|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHH
Confidence            46789999999999999888887

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=94.00  E-value=0.057  Score=26.97  Aligned_cols=37  Identities=16%  Similarity=0.123  Sum_probs=28.8

Q ss_pred             CCCcccCCchHHHHHH-HHhcCCC-----Cccccc--CCCccccc
Q psy7447          59 HCPYRGKQKVHLKTHV-AIKHQGP-----EMLSVK--HQGPEMLS   95 (114)
Q Consensus        59 ~c~~~~~~~~~l~~h~-~~~~~~~-----p~~~C~--~C~~~f~~   95 (114)
                      .|++.|.+...|..|+ ..|.+.+     ++|.|.  -|++.+..
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~   52 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDD   52 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESS
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCC
Confidence            4899999999999998 4777665     249998  48876654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.82  E-value=0.038  Score=25.92  Aligned_cols=27  Identities=22%  Similarity=0.501  Sum_probs=23.7

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      .++.|..|+..|.....|..||+.-.+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            678899999999999999999996544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.55  E-value=0.11  Score=30.98  Aligned_cols=66  Identities=21%  Similarity=0.421  Sum_probs=43.0

Q ss_pred             ceec--CcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccc
Q psy7447          25 RYTC--DSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLS   95 (114)
Q Consensus        25 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~   95 (114)
                      ...|  ..|+.... ...+..|.. .-. ..+..|+.|+..+. ...|..|....-..++ -.|.+|+..+..
T Consensus        82 ~v~C~n~GC~~~~~-~~~l~~H~~-~C~-~~~v~C~~C~~~~~-r~~l~~H~~~~C~~r~-~~C~~C~~~~~~  149 (170)
T 3hcs_A           82 MVKCPNEGCLHKME-LRHLEDHQA-HCE-FALMDCPQCQRPFQ-KFHINIHILKDCPRRQ-VSCDNCAASMAF  149 (170)
T ss_dssp             EEECCSTTCCCEEE-GGGHHHHHT-TCT-TSEEECTTTCCEEE-GGGHHHHHHHTCTTCE-EECTTTCCEEEG
T ss_pred             ccCCCCCCCCceec-HhHHHHHHh-cCC-ceeeECCCCChHHH-HHHHHHHhhhhCCCCC-eECCCCCCccCH
Confidence            3456  34655443 355667753 334 56778888887774 4567788876666666 788999887764

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=90.66  E-value=0.33  Score=25.35  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=27.4

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCc
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQK   67 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~   67 (114)
                      -.|.|+.|+..++. ..|..|...=.+ ...+.|..|+..|...
T Consensus         9 V~F~C~~Cgd~lKK-~kv~~H~~~Cr~-~~~~SCIDC~~~F~~~   50 (79)
T 1wjv_A            9 VFFTCNACGESVKK-IQVEKHVSNCRN-CECLSCIDCGKDFWGD   50 (79)
T ss_dssp             CEEEESSSCCEEET-THHHHHHHHCTT-CCEEEETTTTEEEEGG
T ss_pred             eEEEcCCCCCeeec-ccchhHHhhCCC-CCcEEecccCCeeCCC
Confidence            45788888877664 446777543222 3457888888888763

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.64  E-value=0.84  Score=19.79  Aligned_cols=24  Identities=25%  Similarity=0.436  Sum_probs=14.7

Q ss_pred             eeCCCCCcccCCchHHHHHHHHhc
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      |.|+.|-+.+.+...|..|....+
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            566666666666666666655444

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=87.36  E-value=0.18  Score=23.56  Aligned_cols=12  Identities=33%  Similarity=0.894  Sum_probs=6.6

Q ss_pred             CeeCCCCCcccC
Q psy7447          54 RYQCPHCPYRGK   65 (114)
Q Consensus        54 ~~~C~~c~~~~~   65 (114)
                      .|+|.+||..+.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            355666665554

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=87.23  E-value=0.29  Score=30.26  Aligned_cols=27  Identities=19%  Similarity=0.103  Sum_probs=18.9

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPE   92 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~   92 (114)
                      ...|.|.+||..+.             |..| +.|+.|+..
T Consensus       169 ~~~~~C~~CG~i~~-------------g~~p-~~CP~C~~~  195 (202)
T 1yuz_A          169 DKFHLCPICGYIHK-------------GEDF-EKCPICFRP  195 (202)
T ss_dssp             CCEEECSSSCCEEE-------------SSCC-SBCTTTCCB
T ss_pred             CcEEEECCCCCEEc-------------CcCC-CCCCCCCCC
Confidence            34689999987654             2234 899999853

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=86.89  E-value=0.51  Score=26.03  Aligned_cols=33  Identities=15%  Similarity=0.119  Sum_probs=20.8

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSI   96 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~   96 (114)
                      ..++.|..||..|..           ...+| -.|+.|+......
T Consensus        65 v~p~~C~~CG~~F~~-----------~~~kP-srCP~CkSe~Ie~   97 (105)
T 2gmg_A           65 IKPAQCRKCGFVFKA-----------EINIP-SRCPKCKSEWIEE   97 (105)
T ss_dssp             ECCCBBTTTCCBCCC-----------CSSCC-SSCSSSCCCCBCC
T ss_pred             EECcChhhCcCeecc-----------cCCCC-CCCcCCCCCccCC
Confidence            357788888888711           11234 7888888766543

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=85.76  E-value=0.96  Score=21.08  Aligned_cols=9  Identities=11%  Similarity=0.043  Sum_probs=4.8

Q ss_pred             ccccCCCcc
Q psy7447          84 LSVKHQGPE   92 (114)
Q Consensus        84 ~~C~~C~~~   92 (114)
                      ..|++||..
T Consensus        24 IrCpyCGyr   32 (48)
T 4ayb_P           24 VRCPYCGYK   32 (48)
T ss_dssp             SCCTTTCCS
T ss_pred             cccCccCcE
Confidence            555555543

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.02  E-value=0.53  Score=25.07  Aligned_cols=24  Identities=29%  Similarity=0.411  Sum_probs=11.7

Q ss_pred             eeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      ..|.+||+.|..   |.+|+..++|..
T Consensus        22 iiClecGK~fK~---LkRHL~~~hglt   45 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSMT   45 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCSC
T ss_pred             eEecccchhhHH---HHHHHHHccCCC
Confidence            345555555543   445555544443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=84.44  E-value=1.5  Score=25.94  Aligned_cols=56  Identities=16%  Similarity=0.265  Sum_probs=33.0

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      .+..|..|+..+. ...+..|....-. .+...|..|+..+.. ..+..|..+..|+.+
T Consensus       109 ~~v~C~~C~~~~~-r~~l~~H~~~~C~-~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          109 ALMDCPQCQRPFQ-KFHINIHILKDCP-RRQVSCDNCAASMAF-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             SEEECTTTCCEEE-GGGHHHHHHHTCT-TCEEECTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred             eeeECCCCChHHH-HHHHHHHhhhhCC-CCCeECCCCCCccCH-HHHHhHHHhCcChhh
Confidence            4456766766553 4556667665555 666677777766655 346677766666544

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=83.65  E-value=1.8  Score=18.96  Aligned_cols=21  Identities=14%  Similarity=0.168  Sum_probs=9.7

Q ss_pred             eeCCCCCcccCCchHHHHHHH
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVA   75 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~   75 (114)
                      ..|..|.-+|.....+..|.+
T Consensus         9 ~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             CeeccccceehhhHHHhhhhe
Confidence            344444444444444444443

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=81.97  E-value=2.1  Score=21.28  Aligned_cols=34  Identities=15%  Similarity=0.303  Sum_probs=22.4

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCccccccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIK   97 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~   97 (114)
                      ...|.|..|+..+....           ..+ ..|+.||...+.+.
T Consensus        19 ~v~Y~C~~Cg~~~~l~~-----------~~~-iRC~~CG~RILyK~   52 (63)
T 3h0g_L           19 TMIYLCADCGARNTIQA-----------KEV-IRCRECGHRVMYKM   52 (63)
T ss_dssp             CCCCBCSSSCCBCCCCS-----------SSC-CCCSSSCCCCCBCC
T ss_pred             CeEEECCCCCCeeecCC-----------CCc-eECCCCCcEEEEEe
Confidence            45678888887776441           123 78888887766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	114
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.7
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.49
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.37
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.36
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.32
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.31
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.3
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.28
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.27
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.22
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.18
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.18
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.16
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.16
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.14
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.14
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.13
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.09
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.07
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.06
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.06
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.06
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.03
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.02
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.99
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.91
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.88
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.83
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.77
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.73
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.72
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.63
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.62
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.55
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.48
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.38
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.31
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.3
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.27
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.2
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.2
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.14
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.07
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.97
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.95
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.87
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.81
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.8
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.77
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.75
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.7
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.65
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.61
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.57
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.51
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.44
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.38
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.37
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.29
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.21
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.2
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.08
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.07
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.01
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.01
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.97
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.88
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.85
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.85
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.8
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.67
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.67
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.58
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.52
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.52
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.52
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.36
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.12
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.06
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.04
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.72
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.65
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.62
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.22
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.96
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.89
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.86
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.6
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.83
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.56
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.45
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.96
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.92
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	87.4
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.31
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	86.79
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	86.15
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.12
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.8
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.45
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	81.63

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=8.1e-18  Score=82.66  Aligned_cols=53  Identities=34%  Similarity=0.588  Sum_probs=50.2

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHh
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~   77 (114)
                      ||||.| .||+.|.....|..|+++|++ ++||.|..|+++|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~-ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLG-LRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSC-CCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhcccc-ccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999 599999999999999999999 99999999999999999999999875

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=3.7e-15  Score=72.92  Aligned_cols=47  Identities=15%  Similarity=0.193  Sum_probs=42.6

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccccccccC
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEMLSIKHQG  100 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~~~~~~~  100 (114)
                      +|+|.|. ||++|....+|..|+++|+|++| |.|.+||+.|.......
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekp-y~C~~C~k~F~~~~~L~   47 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP-YGCGVCGKKFKMKHHLV   47 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCS-EECTTTSCEESSSHHHH
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccC-CcCCCcCCEecCHHHHH
Confidence            5899995 99999999999999999999998 99999999999765543

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=2.5e-13  Score=61.56  Aligned_cols=35  Identities=17%  Similarity=0.324  Sum_probs=23.8

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHH-HhcCCCCccccc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVA-IKHQGPEMLSVK   87 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~-~~~~~~p~~~C~   87 (114)
                      ++||.|..||++|...++|..|++ +|+|++| |.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekp-y~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERP-HKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCC-CCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcC-cCCc
Confidence            566777777777777777777754 5667666 7665

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.9e-13  Score=61.94  Aligned_cols=36  Identities=31%  Similarity=0.576  Sum_probs=27.9

Q ss_pred             CccccCCCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          14 PHTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        14 ~h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      .|+++ |+++|||.|.+||+.|...++|..|+++|+|
T Consensus         2 rH~~~-Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQ-QRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSC-CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcc-cCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            36666 7788888888888888888888888887776

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=5e-13  Score=60.54  Aligned_cols=37  Identities=27%  Similarity=0.506  Sum_probs=34.0

Q ss_pred             CCCceecCcchhhcCCchHHHHHHH-HhcCCCCCeeCCC
Q psy7447          22 LQFRYTCDSCGKVYKLKRSLYRHRT-LECGKEPRYQCPH   59 (114)
Q Consensus        22 ~~k~~~C~~C~~~f~~~~~l~~h~~-~h~~~~k~~~C~~   59 (114)
                      .+|||.|.+||+.|...++|..|++ .|++ ++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~-ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCC-CcCcCCcC
Confidence            4799999999999999999999976 7999 99999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=7.2e-13  Score=57.82  Aligned_cols=31  Identities=26%  Similarity=0.516  Sum_probs=20.1

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++|||.|.+|++.|...+.|..|+++|+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            5666666666666666666666666666655

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=1.8e-13  Score=62.01  Aligned_cols=37  Identities=19%  Similarity=0.289  Sum_probs=34.7

Q ss_pred             HHHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          43 RHRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        43 ~h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +|+++|++ ++||.|..||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~-ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRE-RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCC-SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCC-CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            46788999 99999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.28  E-value=1.2e-12  Score=58.77  Aligned_cols=35  Identities=17%  Similarity=0.184  Sum_probs=27.9

Q ss_pred             ccccCCCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          15 HTLFNPLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        15 h~~~~h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+|+ |+++|||.|..|++.|...++|..|++.|.+
T Consensus         2 h~R~-HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRG-STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSST-TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCc-cCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            5677 8888888888888888888888888887753

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.5e-12  Score=56.78  Aligned_cols=33  Identities=21%  Similarity=0.377  Sum_probs=31.1

Q ss_pred             HhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          47 LECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        47 ~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +|++ ++||.|..|+++|...++|..|+++|+||
T Consensus         1 IHTg-ekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSG-EKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTT-CCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCC-CCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            4788 99999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=4.1e-12  Score=56.68  Aligned_cols=31  Identities=23%  Similarity=0.333  Sum_probs=21.7

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++|||.|..|++.|...+.|..|++.|.+
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            6677777777777777777777777776654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=1.1e-11  Score=52.47  Aligned_cols=29  Identities=28%  Similarity=0.683  Sum_probs=20.3

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      |||.|.+|+++|.++++|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46677777777777777777777777654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.18  E-value=8.1e-12  Score=52.91  Aligned_cols=29  Identities=21%  Similarity=0.361  Sum_probs=20.3

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +||.|.+|+++|...++|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46677777777777777777777777664

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1e-11  Score=55.34  Aligned_cols=34  Identities=32%  Similarity=0.506  Sum_probs=31.6

Q ss_pred             HHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          46 TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        46 ~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      ++|+| ++||.|..|+++|...++|..|+++|+++
T Consensus         1 R~HTg-ekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTG-EKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCC-CCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCC-CCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            46899 99999999999999999999999999865

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=1e-11  Score=54.76  Aligned_cols=31  Identities=16%  Similarity=0.294  Sum_probs=22.4

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |+++|||.|.+|++.|...++|..|++.|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            5677777777777777777777777777765

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=1.4e-11  Score=51.57  Aligned_cols=27  Identities=26%  Similarity=0.442  Sum_probs=14.8

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      |||.|.+|+++|..+++|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            455555555555555555555555544

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=5.8e-12  Score=56.51  Aligned_cols=35  Identities=23%  Similarity=0.325  Sum_probs=32.4

Q ss_pred             HHHHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          44 HRTLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        44 h~~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      |.+.|++ ++||.|..|+++|...++|..|+++|.+
T Consensus         2 h~R~HTg-eKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTG-IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCC-SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCC-ccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            5688999 9999999999999999999999999864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=1.4e-11  Score=51.64  Aligned_cols=28  Identities=21%  Similarity=0.413  Sum_probs=26.8

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ||||.|..|++.|...++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=4.6e-11  Score=53.01  Aligned_cols=33  Identities=24%  Similarity=0.519  Sum_probs=25.9

Q ss_pred             eeCCC--CCcccCCchHHHHHHHHhcCCCCcccccC
Q psy7447          55 YQCPH--CPYRGKQKVHLKTHVAIKHQGPEMLSVKH   88 (114)
Q Consensus        55 ~~C~~--c~~~~~~~~~l~~h~~~~~~~~p~~~C~~   88 (114)
                      |.|+.  |+++|.+.++|.+|+++|+|++| |.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekp-y~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD-YICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCC-CSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCC-EeCCC
Confidence            55654  88888888888888888888888 88863

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=4.9e-11  Score=53.00  Aligned_cols=29  Identities=14%  Similarity=0.201  Sum_probs=19.7

Q ss_pred             CCCCCceecCcchhhcCCchHHHHHHHHh
Q psy7447          20 PLLQFRYTCDSCGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        20 h~~~k~~~C~~C~~~f~~~~~l~~h~~~h   48 (114)
                      |+++|||.|..|++.|...++|..|++.+
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccc
Confidence            66777777777777777777777775543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.07  E-value=2.8e-11  Score=56.94  Aligned_cols=40  Identities=13%  Similarity=0.184  Sum_probs=25.8

Q ss_pred             ccCCCCccccCCCCCCceecCc--chhhcCCchHHHHHHHHhcC
Q psy7447           9 EFNLPPHTLFNPLLQFRYTCDS--CGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus         9 ~~~l~~h~~~~h~~~k~~~C~~--C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ...+..|+ . |++++||.|.+  |++.|...++|..|+++|+|
T Consensus         4 ~~~l~~h~-~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_           4 RGSIDKYV-K-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             CSSGGGSC-E-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             cchhcchh-h-ccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            33444444 3 66777777765  77777777777777777766

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=4.4e-11  Score=52.69  Aligned_cols=32  Identities=16%  Similarity=0.344  Sum_probs=29.5

Q ss_pred             hcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          48 ECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        48 h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      |+| ++||.|.+|++.|...++|..|+++|+..
T Consensus         2 ~TG-ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSG-KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSC-CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCC-CccccCCCCCCcccChHHHHHHccccCCc
Confidence            567 99999999999999999999999999864

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=5.9e-11  Score=50.10  Aligned_cols=29  Identities=17%  Similarity=0.398  Sum_probs=27.3

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEP   53 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k   53 (114)
                      |||.|.+|++.|...+.|..|+++|++ ++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg-eK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN-KK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC-CC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC-cC
Confidence            689999999999999999999999998 54

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.06  E-value=4e-11  Score=50.70  Aligned_cols=29  Identities=21%  Similarity=0.508  Sum_probs=27.3

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEP   53 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k   53 (114)
                      |||.|.+|++.|...+.|..|+++|+| ++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg-EK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN-EK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS-SC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC-CC
Confidence            689999999999999999999999998 64

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=6.4e-11  Score=52.62  Aligned_cols=34  Identities=32%  Similarity=0.493  Sum_probs=30.3

Q ss_pred             HHhcCCCCCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          46 TLECGKEPRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        46 ~~h~~~~k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      ++|+| ++||.|+.|++.|...++|..|++.++++
T Consensus         1 R~HTg-ekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSG-EKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSC-CCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCC-CCCEeCCCCcccccchHHHHHHcccccCC
Confidence            46889 99999999999999999999998776654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.9e-11  Score=48.55  Aligned_cols=24  Identities=29%  Similarity=0.447  Sum_probs=12.2

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHh
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~   77 (114)
                      ||+|.+||++|...++|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            445555555555555555555544

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=8.7e-11  Score=48.03  Aligned_cols=26  Identities=27%  Similarity=0.654  Sum_probs=24.7

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhc
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLEC   49 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~   49 (114)
                      |||+|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999985

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.99  E-value=2.4e-11  Score=57.22  Aligned_cols=40  Identities=15%  Similarity=0.386  Sum_probs=35.2

Q ss_pred             HHHHHHHHhcCCCCCeeCCC--CCcccCCchHHHHHHHHhcCCC
Q psy7447          40 SLYRHRTLECGKEPRYQCPH--CPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        40 ~l~~h~~~h~~~~k~~~C~~--c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      .+..|+. |.+ ++||.|..  |+++|...++|..|+++|+|++
T Consensus         6 ~l~~h~~-h~g-ekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMP-DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EET-TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccC-CCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4555664 889 99999987  9999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=5.2e-10  Score=47.42  Aligned_cols=28  Identities=21%  Similarity=0.311  Sum_probs=19.4

Q ss_pred             CCeeCCC--CCcccCCchHHHHHHHHhcCC
Q psy7447          53 PRYQCPH--CPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        53 k~~~C~~--c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +||.|..  |+++|...++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4666765  777777777777777777764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=7.2e-10  Score=47.03  Aligned_cols=28  Identities=32%  Similarity=0.558  Sum_probs=18.1

Q ss_pred             CCeeCCC--CCcccCCchHHHHHHHHhcCC
Q psy7447          53 PRYQCPH--CPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        53 k~~~C~~--c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      +||.|..  |+++|...++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4566654  666666666666666666664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.2e-09  Score=48.36  Aligned_cols=32  Identities=31%  Similarity=0.816  Sum_probs=29.6

Q ss_pred             eecCc--chhhcCCchHHHHHHHHhcCCCCCeeCC
Q psy7447          26 YTCDS--CGKVYKLKRSLYRHRTLECGKEPRYQCP   58 (114)
Q Consensus        26 ~~C~~--C~~~f~~~~~l~~h~~~h~~~~k~~~C~   58 (114)
                      |.|..  |++.|...+.|..|+++|++ ++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg-ekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD-TRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT-SCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC-CCCEeCC
Confidence            67765  99999999999999999999 9999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.2e-09  Score=45.82  Aligned_cols=29  Identities=17%  Similarity=0.283  Sum_probs=17.9

Q ss_pred             CCeeCC--CCCcccCCchHHHHHHHHhcCCC
Q psy7447          53 PRYQCP--HCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        53 k~~~C~--~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +||.|+  .|+++|...++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            355663  46666666666666666666653

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=3.1e-09  Score=44.94  Aligned_cols=27  Identities=26%  Similarity=0.368  Sum_probs=25.7

Q ss_pred             CceecCc--chhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDS--CGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~--C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |||.|..  |++.|...+.|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            6899988  99999999999999999998

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.7e-09  Score=44.77  Aligned_cols=27  Identities=30%  Similarity=0.635  Sum_probs=25.5

Q ss_pred             CceecCc--chhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDS--CGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~--C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |||.|..  |++.|...+.|..|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            6899977  99999999999999999998

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=8.2e-09  Score=44.00  Aligned_cols=29  Identities=31%  Similarity=0.644  Sum_probs=26.2

Q ss_pred             CceecC--cchhhcCCchHHHHHHHHhcCCCC
Q psy7447          24 FRYTCD--SCGKVYKLKRSLYRHRTLECGKEP   53 (114)
Q Consensus        24 k~~~C~--~C~~~f~~~~~l~~h~~~h~~~~k   53 (114)
                      +||.|.  .|++.|...++|..|+++|+| ++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg-eK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG-EK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC-CC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc-cC
Confidence            689995  699999999999999999998 64

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.62  E-value=8.8e-09  Score=43.14  Aligned_cols=27  Identities=30%  Similarity=0.609  Sum_probs=15.4

Q ss_pred             CCeeCCC--CCcccCCchHHHHHHHHhcC
Q psy7447          53 PRYQCPH--CPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        53 k~~~C~~--c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +||.|..  |+++|...++|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3555544  66666666666666665554

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=1.6e-08  Score=42.31  Aligned_cols=27  Identities=26%  Similarity=0.604  Sum_probs=25.1

Q ss_pred             CceecCc--chhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDS--CGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~--C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |||.|..  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899977  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=5.6e-08  Score=41.56  Aligned_cols=26  Identities=23%  Similarity=0.392  Sum_probs=12.8

Q ss_pred             CCeeCCC--CCcccCCchHHHHHHHHhc
Q psy7447          53 PRYQCPH--CPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        53 k~~~C~~--c~~~~~~~~~l~~h~~~~~   78 (114)
                      +||.|..  |+++|...++|.+|+++|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4444543  5555555555555555444

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.48  E-value=4.8e-08  Score=41.78  Aligned_cols=28  Identities=29%  Similarity=0.619  Sum_probs=26.0

Q ss_pred             CCceecCc--chhhcCCchHHHHHHHHhcC
Q psy7447          23 QFRYTCDS--CGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        23 ~k~~~C~~--C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ++||.|..  |++.|...++|..|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            68999987  99999999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=4.2e-08  Score=40.59  Aligned_cols=26  Identities=31%  Similarity=0.627  Sum_probs=15.7

Q ss_pred             CCeeCCC--CCcccCCchHHHHHHHHhc
Q psy7447          53 PRYQCPH--CPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        53 k~~~C~~--c~~~~~~~~~l~~h~~~~~   78 (114)
                      +||.|..  |+++|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3555654  6666666666666666653

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=6.3e-08  Score=40.05  Aligned_cols=26  Identities=23%  Similarity=0.419  Sum_probs=23.9

Q ss_pred             CceecCc--chhhcCCchHHHHHHHHhc
Q psy7447          24 FRYTCDS--CGKVYKLKRSLYRHRTLEC   49 (114)
Q Consensus        24 k~~~C~~--C~~~f~~~~~l~~h~~~h~   49 (114)
                      +||.|..  |++.|...++|..|++.|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899987  9999999999999999985

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=2e-07  Score=37.94  Aligned_cols=28  Identities=29%  Similarity=0.524  Sum_probs=20.1

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +|||.|.+|+.+|+.+..+..|.+.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4677777777777777777777777765

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.3e-07  Score=36.75  Aligned_cols=24  Identities=29%  Similarity=0.394  Sum_probs=12.9

Q ss_pred             eCCCCCcccCCchHHHHHHHHhcC
Q psy7447          56 QCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        56 ~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      .|++|++.|+++..|..|++.|+|
T Consensus         3 kc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             ccchhhhHhcchhHHHHHhhccCC
Confidence            455555555555555555555543

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.27  E-value=3.1e-07  Score=36.82  Aligned_cols=27  Identities=22%  Similarity=0.359  Sum_probs=18.8

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      ++||.|.+||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            367777777777777777777776653

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=3.5e-07  Score=35.54  Aligned_cols=26  Identities=31%  Similarity=0.620  Sum_probs=23.6

Q ss_pred             ceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |..|..|++-|+.+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46799999999999999999999875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=4.1e-07  Score=37.86  Aligned_cols=30  Identities=17%  Similarity=0.211  Sum_probs=18.4

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcCCCC
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPE   82 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p   82 (114)
                      +...|+.||+.|.....|++|.-.|.+++|
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            345566666666666666666666666665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.14  E-value=7.8e-07  Score=35.63  Aligned_cols=27  Identities=22%  Similarity=0.583  Sum_probs=24.5

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhc
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLEC   49 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~   49 (114)
                      ++||.|..||+.|.......+|.+.|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999988874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=2e-06  Score=34.95  Aligned_cols=29  Identities=34%  Similarity=0.582  Sum_probs=26.6

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCC
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      ++||.|++|...|..+.-+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57999999999999999999999999774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.2e-06  Score=35.62  Aligned_cols=31  Identities=32%  Similarity=0.690  Sum_probs=28.6

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcCCCCCe
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECGKEPRY   55 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~~~k~~   55 (114)
                      +...|+.||+.|.....|.+|...|++ ++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~-ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSG-EKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCS-CCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCC-CCCC
Confidence            566899999999999999999999999 9987

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.6e-06  Score=33.68  Aligned_cols=24  Identities=21%  Similarity=0.350  Sum_probs=12.0

Q ss_pred             eCCCCCcccCCchHHHHHHHHhcC
Q psy7447          56 QCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        56 ~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      .|..||++|.-.+.|.+|+-+|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            444555555555555555544444

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=8.5e-06  Score=32.47  Aligned_cols=25  Identities=28%  Similarity=0.521  Sum_probs=12.1

Q ss_pred             eecCcchhhcCCchHHHHHHHHhcC
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |.|.+|+.....++.|..|++.|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            3444555444444445555554444

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=8.2e-06  Score=32.51  Aligned_cols=28  Identities=29%  Similarity=0.577  Sum_probs=24.6

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      .|.|+.|+.....++.|..|++.|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            0579999999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.80  E-value=1.4e-05  Score=31.06  Aligned_cols=26  Identities=27%  Similarity=0.392  Sum_probs=18.6

Q ss_pred             eCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          56 QCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        56 ~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +|+.|.+.|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            56777777777777777777777764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=8.4e-06  Score=32.17  Aligned_cols=25  Identities=32%  Similarity=0.698  Sum_probs=23.2

Q ss_pred             eecCcchhhcCCchHHHHHHHHhcC
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ..|.+||+.|...+.|.+|+..|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4699999999999999999999987

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=1.3e-05  Score=32.41  Aligned_cols=25  Identities=32%  Similarity=0.578  Sum_probs=13.7

Q ss_pred             CeeCCC--CCcccCCchHHHHHHHHhc
Q psy7447          54 RYQCPH--CPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        54 ~~~C~~--c~~~~~~~~~l~~h~~~~~   78 (114)
                      ||.|.+  |++++...++|+.|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            455543  5555555555665555544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.4e-05  Score=34.91  Aligned_cols=25  Identities=32%  Similarity=0.546  Sum_probs=16.0

Q ss_pred             CCCceecCcchhhcCCchHHHHHHH
Q psy7447          22 LQFRYTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        22 ~~k~~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      +-|||.|..|++.|....++-+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4567777777777776666655543

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.2e-05  Score=31.89  Aligned_cols=27  Identities=22%  Similarity=0.656  Sum_probs=12.9

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +||.|..|...-...+.|..|.+.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            344444444444444444444444443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.6e-05  Score=31.48  Aligned_cols=28  Identities=18%  Similarity=0.326  Sum_probs=25.1

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ++||+|..|.......+.|..|.+.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            5899999999888888999999999987

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=1.9e-05  Score=31.94  Aligned_cols=27  Identities=33%  Similarity=0.513  Sum_probs=23.4

Q ss_pred             CceecCc--chhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDS--CGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~--C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |||.|..  |++++..+++|..|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899976  99999999999999997643

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.57  E-value=2.2e-05  Score=30.00  Aligned_cols=23  Identities=30%  Similarity=0.736  Sum_probs=15.5

Q ss_pred             eecCcchhhcCCchHHHHHHHHh
Q psy7447          26 YTCDSCGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        26 ~~C~~C~~~f~~~~~l~~h~~~h   48 (114)
                      |.|..|+++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666777777777777776665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.51  E-value=3.5e-05  Score=33.34  Aligned_cols=27  Identities=22%  Similarity=0.470  Sum_probs=19.7

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +.|.|..|++.|.+...|..|++.|..
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcc
Confidence            557777777777777777777777654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.00013  Score=29.10  Aligned_cols=27  Identities=41%  Similarity=0.839  Sum_probs=14.9

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +||+|..|.......++|..|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            355555555555555556666555443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=7e-05  Score=32.67  Aligned_cols=26  Identities=27%  Similarity=0.457  Sum_probs=22.2

Q ss_pred             CCCCCeeCCCCCcccCCchHHHHHHHH
Q psy7447          50 GKEPRYQCPHCPYRGKQKVHLKTHVAI   76 (114)
Q Consensus        50 ~~~k~~~C~~c~~~~~~~~~l~~h~~~   76 (114)
                      | .|||+|..|++.|-+..++.+|...
T Consensus         2 G-iKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 G-IKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             C-CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             C-CCceeccchhhhhhhHHHHHHhhhh
Confidence            5 7899999999999999988888653

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.37  E-value=8.3e-05  Score=28.80  Aligned_cols=26  Identities=31%  Similarity=0.483  Sum_probs=23.6

Q ss_pred             ecCcchhhcCCchHHHHHHHHhcCCCC
Q psy7447          27 TCDSCGKVYKLKRSLYRHRTLECGKEP   53 (114)
Q Consensus        27 ~C~~C~~~f~~~~~l~~h~~~h~~~~k   53 (114)
                      +|+.|.+.|.++.-|..|.+.|+| ++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg-ek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG-EK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS-CC
T ss_pred             cCcchHHHHHHhHhhhhccccccC-CC
Confidence            699999999999999999999998 53

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=9.1e-05  Score=29.01  Aligned_cols=25  Identities=24%  Similarity=0.460  Sum_probs=13.5

Q ss_pred             CceecCcchhhcCCchHHHHHHHHh
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h   48 (114)
                      |||.|..|...-...++|..|++.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4555555555555555555555544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00022  Score=28.43  Aligned_cols=27  Identities=19%  Similarity=0.237  Sum_probs=23.9

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |||+|..|.......++|..|..+-.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            689999999999999999999987554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00018  Score=28.17  Aligned_cols=26  Identities=27%  Similarity=0.677  Sum_probs=23.6

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      +|+.|..|...-...++|+.|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78999999999999999999999874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.08  E-value=0.00013  Score=27.84  Aligned_cols=24  Identities=25%  Similarity=0.481  Sum_probs=21.0

Q ss_pred             eeCCCCCcccCCchHHHHHHHHhc
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      |.|..|.++|--++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            568899999999999999998874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.07  E-value=0.0003  Score=30.32  Aligned_cols=30  Identities=17%  Similarity=0.408  Sum_probs=26.0

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      .+.|.|..|++.|.+..+|--|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            467999999999999999999999886554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.01  E-value=0.00053  Score=27.09  Aligned_cols=25  Identities=16%  Similarity=0.503  Sum_probs=12.0

Q ss_pred             eeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      |.|..|...|.....|..|+-.|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4444444444444444444444444

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.01  E-value=0.00037  Score=27.57  Aligned_cols=28  Identities=21%  Similarity=0.512  Sum_probs=25.6

Q ss_pred             CCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +..|.|..|...|...-.|..||..|+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            4578999999999999999999999987

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00024  Score=28.87  Aligned_cols=24  Identities=21%  Similarity=0.391  Sum_probs=12.8

Q ss_pred             CeeCCC--CCcccCCchHHHHHH-HHh
Q psy7447          54 RYQCPH--CPYRGKQKVHLKTHV-AIK   77 (114)
Q Consensus        54 ~~~C~~--c~~~~~~~~~l~~h~-~~~   77 (114)
                      ||.|..  |.++|++.+....|+ |+|
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CccccCCChhhhhcchhhhhhhccccc
Confidence            455543  555666555555554 443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00027  Score=28.02  Aligned_cols=22  Identities=32%  Similarity=0.653  Sum_probs=11.7

Q ss_pred             ceecCcchhhcCCchHHHHHHH
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      ||.|..|.-.|..+.+|..||.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            3455555555555555555554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.00064  Score=26.97  Aligned_cols=27  Identities=26%  Similarity=0.560  Sum_probs=18.2

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      +||.|..|.....+.++|..|++..++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            366777777666677777777765554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.00053  Score=27.13  Aligned_cols=25  Identities=32%  Similarity=0.588  Sum_probs=22.0

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      ||.|..|..+|..+.+|..|++...
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6889999999999999999988654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.80  E-value=0.00057  Score=26.96  Aligned_cols=18  Identities=33%  Similarity=0.672  Sum_probs=8.4

Q ss_pred             chhhcCCchHHHHHHHHh
Q psy7447          31 CGKVYKLKRSLYRHRTLE   48 (114)
Q Consensus        31 C~~~f~~~~~l~~h~~~h   48 (114)
                      |++.|..++.|.+|.++|
T Consensus        11 cdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2          11 CDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             ccccccCHHHHhhhhhcc
Confidence            444444444444444433

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00037  Score=28.30  Aligned_cols=27  Identities=19%  Similarity=0.488  Sum_probs=22.5

Q ss_pred             CceecCc--chhhcCCchHHHHHH-HHhcC
Q psy7447          24 FRYTCDS--CGKVYKLKRSLYRHR-TLECG   50 (114)
Q Consensus        24 k~~~C~~--C~~~f~~~~~l~~h~-~~h~~   50 (114)
                      |||.|..  |.+.|+..+.-..|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6899977  999999998888887 77753

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.67  E-value=0.0013  Score=26.02  Aligned_cols=20  Identities=20%  Similarity=0.190  Sum_probs=10.3

Q ss_pred             CCcccCCchHHHHHHHHhcC
Q psy7447          60 CPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        60 c~~~~~~~~~l~~h~~~~~~   79 (114)
                      |.+.|.....|.+|.-.|+|
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            44555555555555555544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.58  E-value=0.0015  Score=25.74  Aligned_cols=25  Identities=32%  Similarity=0.588  Sum_probs=21.2

Q ss_pred             CCeeCC--CCCcccCCchHHHHHHHHh
Q psy7447          53 PRYQCP--HCPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        53 k~~~C~--~c~~~~~~~~~l~~h~~~~   77 (114)
                      .||.|+  .|++.|..++-|.+|-++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            477775  5999999999999998876

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.52  E-value=0.0013  Score=25.99  Aligned_cols=27  Identities=26%  Similarity=0.518  Sum_probs=23.3

Q ss_pred             CceecC--cchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCD--SCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~--~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +||.|.  -|.+.|.....|.+|..+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            577775  599999999999999999987

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.52  E-value=0.00089  Score=27.12  Aligned_cols=21  Identities=29%  Similarity=0.760  Sum_probs=10.5

Q ss_pred             ceecCcchhhcCCchHHHHHH
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHR   45 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~   45 (114)
                      ||.|..|++.|....-|.+|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHHH
Confidence            345555555555554444443

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.52  E-value=0.00065  Score=27.55  Aligned_cols=26  Identities=23%  Similarity=0.345  Sum_probs=22.5

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      ||.|.+|++.|....-+-+|...-++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            78999999999999999999876554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.36  E-value=0.0011  Score=25.13  Aligned_cols=22  Identities=32%  Similarity=0.718  Sum_probs=15.9

Q ss_pred             ceecCcchhhcCCchHHHHHHH
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      ||.|..|..-|..+..|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6777777777777777777754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0021  Score=25.06  Aligned_cols=25  Identities=28%  Similarity=0.579  Sum_probs=18.6

Q ss_pred             CeeCCCCCcccCCchHHHHHHHHhc
Q psy7447          54 RYQCPHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        54 ~~~C~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      |..|+.|..+.+++..|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4567778888888888888877763

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.06  E-value=0.0037  Score=26.67  Aligned_cols=27  Identities=26%  Similarity=0.509  Sum_probs=19.3

Q ss_pred             CCCeeC--CCCCcccCCchHHHHHHHHhc
Q psy7447          52 EPRYQC--PHCPYRGKQKVHLKTHVAIKH   78 (114)
Q Consensus        52 ~k~~~C--~~c~~~~~~~~~l~~h~~~~~   78 (114)
                      ++||.|  +.|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            567777  347777777777777777664

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.04  E-value=0.0022  Score=24.82  Aligned_cols=22  Identities=36%  Similarity=0.825  Sum_probs=12.6

Q ss_pred             ceecCcchhhcCCchHHHHHHH
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      ||+|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4556666666665665555543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0053  Score=26.17  Aligned_cols=29  Identities=17%  Similarity=0.326  Sum_probs=24.8

Q ss_pred             CCCceec--CcchhhcCCchHHHHHHHHhcC
Q psy7447          22 LQFRYTC--DSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        22 ~~k~~~C--~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      .+|||.|  .-|+.+|.....|..|..-|..
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~m   33 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhee
Confidence            4799999  5699999999999999887754

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0035  Score=28.12  Aligned_cols=26  Identities=27%  Similarity=0.451  Sum_probs=21.9

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhc
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLEC   49 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~   49 (114)
                      -.|.|..|++.|.....|..|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45789999999999999999988774

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.0055  Score=24.17  Aligned_cols=27  Identities=22%  Similarity=0.333  Sum_probs=22.4

Q ss_pred             CceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +||+|..|.---...++|..|++...+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999998877888999999875544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.0068  Score=25.20  Aligned_cols=18  Identities=17%  Similarity=0.028  Sum_probs=9.3

Q ss_pred             ccCCchHHHHHHHHhcCC
Q psy7447          63 RGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        63 ~~~~~~~l~~h~~~~~~~   80 (114)
                      .|.....|..|+|.|+||
T Consensus        16 pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          16 PFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCSSHHHHHHHTHHHHCC
T ss_pred             cchhHHHHHHHHhhcCCC
Confidence            345555555555555543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.0085  Score=24.90  Aligned_cols=23  Identities=22%  Similarity=0.291  Sum_probs=19.1

Q ss_pred             cCcchhhcCCchHHHHHHHHhcC
Q psy7447          28 CDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        28 C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      |..-++.|.....|..|++.|+|
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCC
Confidence            45555778889999999999998

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.89  E-value=0.015  Score=23.75  Aligned_cols=23  Identities=26%  Similarity=0.631  Sum_probs=17.4

Q ss_pred             CceecCcchhhcCCchHHHHHHH
Q psy7447          24 FRYTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        24 k~~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      ..|.|.-||.+|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            34678888888888888877765

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.86  E-value=0.036  Score=22.73  Aligned_cols=25  Identities=12%  Similarity=0.280  Sum_probs=13.8

Q ss_pred             eeCCCCCcccCCchHHHHHHHHhcC
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAIKHQ   79 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~~~~   79 (114)
                      |.|..|++.|.+...+.+|....+|
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            4555566666555555555554444

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.60  E-value=0.048  Score=20.46  Aligned_cols=22  Identities=36%  Similarity=0.712  Sum_probs=11.8

Q ss_pred             eeCCCCCcccCCchHHHHHHHH
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAI   76 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~   76 (114)
                      |.|+.|-+.|.++.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            3455555555555555555544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.064  Score=20.62  Aligned_cols=22  Identities=32%  Similarity=0.690  Sum_probs=10.5

Q ss_pred             eeCCCCCcccCCchHHHHHHHH
Q psy7447          55 YQCPHCPYRGKQKVHLKTHVAI   76 (114)
Q Consensus        55 ~~C~~c~~~~~~~~~l~~h~~~   76 (114)
                      ++|+-|+....+++.|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            3444454444445555444443

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.56  E-value=0.1  Score=23.11  Aligned_cols=30  Identities=27%  Similarity=0.498  Sum_probs=19.7

Q ss_pred             CCCeeCCCCCcccCCchHHHHHHHHhcCCC
Q psy7447          52 EPRYQCPHCPYRGKQKVHLKTHVAIKHQGP   81 (114)
Q Consensus        52 ~k~~~C~~c~~~~~~~~~l~~h~~~~~~~~   81 (114)
                      +.|..|+.|+....+.-+|.+|....+=.+
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            556677777777777777777766655433

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.45  E-value=0.12  Score=20.51  Aligned_cols=22  Identities=14%  Similarity=0.244  Sum_probs=13.5

Q ss_pred             CCCcccCCchHHHHHHHHhcCC
Q psy7447          59 HCPYRGKQKVHLKTHVAIKHQG   80 (114)
Q Consensus        59 ~c~~~~~~~~~l~~h~~~~~~~   80 (114)
                      .|+..|+..-.|..|.-.|+|+
T Consensus        10 dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1          10 DCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             GGCCEESSHHHHHHHHHHHHCC
T ss_pred             CcchhhccchhhhHHhhhhcCC
Confidence            3556666666666666666654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.96  E-value=0.052  Score=22.33  Aligned_cols=25  Identities=28%  Similarity=0.689  Sum_probs=16.3

Q ss_pred             CCceecCcchhhcCCchHHHHHHHH
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRTL   47 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~~   47 (114)
                      +-.|+|..|.+.+...+++.+|-.+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            3456777777777777777666443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.92  E-value=0.26  Score=19.14  Aligned_cols=20  Identities=30%  Similarity=0.561  Sum_probs=8.9

Q ss_pred             eCCCCCcccCCchHHHHHHH
Q psy7447          56 QCPHCPYRGKQKVHLKTHVA   75 (114)
Q Consensus        56 ~C~~c~~~~~~~~~l~~h~~   75 (114)
                      .|.-|++...+...+..|.-
T Consensus         4 tc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           4 TCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCSSSCCCCSSHHHHHHHHH
T ss_pred             echhHHHHHhhccCceEEEe
Confidence            34444444444444444433

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.40  E-value=0.14  Score=19.71  Aligned_cols=19  Identities=11%  Similarity=0.289  Sum_probs=14.3

Q ss_pred             CCCcccCCchHHHHHHHHh
Q psy7447          59 HCPYRGKQKVHLKTHVAIK   77 (114)
Q Consensus        59 ~c~~~~~~~~~l~~h~~~~   77 (114)
                      .|++.|...+.++.|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            4778888888887777665

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.31  E-value=0.19  Score=19.10  Aligned_cols=21  Identities=29%  Similarity=0.561  Sum_probs=16.2

Q ss_pred             CcchhhcCCchHHHHHHHHhc
Q psy7447          29 DSCGKVYKLKRSLYRHRTLEC   49 (114)
Q Consensus        29 ~~C~~~f~~~~~l~~h~~~h~   49 (114)
                      +.|++.|.....|..|+.+|+
T Consensus         7 e~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           7 ENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TTCCCEESSHHHHHHHHHHHH
T ss_pred             cCchHHHhhccceEEEeeccc
Confidence            468888888778888887764

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=86.79  E-value=0.19  Score=21.14  Aligned_cols=10  Identities=30%  Similarity=0.501  Sum_probs=4.7

Q ss_pred             CceecCcchh
Q psy7447          24 FRYTCDSCGK   33 (114)
Q Consensus        24 k~~~C~~C~~   33 (114)
                      +.|.|..||.
T Consensus         4 ~~~vC~vCGy   13 (36)
T d1yuza2           4 KFHLCPICGY   13 (36)
T ss_dssp             CEEECSSSCC
T ss_pred             CEEECCCCCC
Confidence            3445555543

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.15  E-value=0.19  Score=21.26  Aligned_cols=9  Identities=56%  Similarity=1.423  Sum_probs=4.3

Q ss_pred             CeeCCCCCc
Q psy7447          54 RYQCPHCPY   62 (114)
Q Consensus        54 ~~~C~~c~~   62 (114)
                      .|.|.+||.
T Consensus         5 ~~~C~vCG~   13 (37)
T d1nnqa2           5 VYICPICGY   13 (37)
T ss_dssp             EEECTTTCC
T ss_pred             EEECCCCCC
Confidence            344555544

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.12  E-value=0.082  Score=25.59  Aligned_cols=24  Identities=17%  Similarity=0.217  Sum_probs=15.4

Q ss_pred             CCceecCcchhhcCCchHHHHHHH
Q psy7447          23 QFRYTCDSCGKVYKLKRSLYRHRT   46 (114)
Q Consensus        23 ~k~~~C~~C~~~f~~~~~l~~h~~   46 (114)
                      ...|-|..|.+.|.+...|..|.+
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            345667777777777666666644

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.80  E-value=0.47  Score=19.53  Aligned_cols=26  Identities=27%  Similarity=0.544  Sum_probs=18.9

Q ss_pred             ceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          25 RYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        25 ~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      ...|.+|-++|++.-++.+|+..-..
T Consensus         3 kltclecmrtfkssfsiwrhqvevhn   28 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHN   28 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheecc
Confidence            45688888888888888888765433

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.45  E-value=0.69  Score=21.88  Aligned_cols=29  Identities=17%  Similarity=0.364  Sum_probs=22.3

Q ss_pred             CCCceecCcchhhcCCchHHHHHHHHhcC
Q psy7447          22 LQFRYTCDSCGKVYKLKRSLYRHRTLECG   50 (114)
Q Consensus        22 ~~k~~~C~~C~~~f~~~~~l~~h~~~h~~   50 (114)
                      +...|+|..|...|.....|..|...|..
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            44668888888888887888888877754

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.63  E-value=0.88  Score=21.42  Aligned_cols=38  Identities=11%  Similarity=0.164  Sum_probs=18.3

Q ss_pred             CCeeCCCCCcccCCchHHHHHHHHhcCCCCcccccCCCcccc
Q psy7447          53 PRYQCPHCPYRGKQKVHLKTHVAIKHQGPEMLSVKHQGPEML   94 (114)
Q Consensus        53 k~~~C~~c~~~~~~~~~l~~h~~~~~~~~p~~~C~~C~~~f~   94 (114)
                      ..|.|+.|++.|.....++    +.......|.|.+|+....
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~----L~d~~~~~F~C~~C~~el~   50 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVE   50 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCE
T ss_pred             CceECCCCCCCcchhhHHH----hcCcCCCeEEecCCCCEEe
Confidence            3456666666665544332    1111111266776665543