Diaphorina citri psyllid: psy754

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610
MNITSLSINVNEFDYAVKSYIEDGIFEQLEYKSSNKDQDLLLEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLRVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIKKTWLPNQ
ccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEcccHHHHHHHHHcccccccEEEEEcccccccccccccHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccHHHHHHccccccccccccHHHHHHccccccccccccccccccccEEcccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHcccccccccEEEcccEEEEEEECccccEEEEEEEEEccEEEEEEEccEEEEcccccccHHHHHHcccccHHHHHHcccccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccccccccEEEEEEcccccccccccHHHcccccccccccccccccccccEEEEECcccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHcccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEECccccccccccccHHHHHHHHHHHHHHHHccccccc
****SLSINVNEFDYAVKSYIEDGIFEQLEYKSSNKDQDLLLEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLRVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIKKTWL***
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MNITSLSINVNEFDYAVKSYIEDGIFEQLEYKSSNKDQDLLLEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLRVGENLQEHLAMAGLTFLVNQPIGLLQDRLIKEMPKLFPQWYFEGKGKLTMLGCEGLAYVNTKYNVFPDDLPDIEFIFTAVSLASDGGVSLRQEMGITDHLYNSVYSSVDRKDSWSIWPMILYPRSRGKVLLKDSHPLTPPLIHANFFNDTRDLDVIVEGIKMAIELSKTKAFQSIGSTLHKAPIPGCSQYTFGSDAYWGCSVRHITTQLHHQCGTCKMGPRWDSSAVVDPQLKVYGVDNLRVVDASIIPVIPGGHTVAVVYMIAEKASDMIKKTWLPNQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentA5WA97
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentQ88CW6
Choline dehydrogenase Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.confidentB5Y008

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0047875 [MF]ecdysone oxidase activityprobableGO:0003824, GO:0003674, GO:0016899, GO:0016614, GO:0016491
GO:0005622 [CC]intracellularprobableGO:0005575, GO:0044464, GO:0005623
GO:0042600 [CC]chorionprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0008205 [BP]ecdysone metabolic processprobableGO:0009791, GO:0002165, GO:0032501, GO:0044281, GO:0007275, GO:1901360, GO:0042445, GO:0044710, GO:0071704, GO:0065007, GO:0044699, GO:0065008, GO:0032502, GO:0016125, GO:0006629, GO:0009987, GO:0010817, GO:0008150, GO:0008152, GO:0045455, GO:0034754, GO:0008202, GO:0044238, GO:0042180, GO:0044707, GO:0044237, GO:0006066, GO:1901615
GO:0008812 [MF]choline dehydrogenase activityprobableGO:0003824, GO:0003674, GO:0016614, GO:0016491
GO:0046331 [BP]lateral inhibitionprobableGO:0032502, GO:0044700, GO:0045165, GO:0048869, GO:0030154, GO:0045168, GO:0008150, GO:0044763, GO:0023052, GO:0007267, GO:0007154, GO:0009987, GO:0044699
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0007498 [BP]mesoderm developmentprobableGO:0032502, GO:0048856, GO:0008150, GO:0009888
GO:0070787 [BP]conidiophore developmentprobableGO:0032502, GO:0032501, GO:0048608, GO:0000003, GO:0044707, GO:0022414, GO:0061458, GO:0048856, GO:0075259, GO:0003006, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0050660 [MF]flavin adenine dinucleotide bindingprobableGO:0043168, GO:0050662, GO:0097159, GO:0043167, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0000166, GO:1901363, GO:1901265

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GPE, chain A
Confidence level:very confident
Coverage over the Query: 42-608
View the alignment between query and template
View the model in PyMOL
Template: 3PL8, chain A
Confidence level:very confident
Coverage over the Query: 43-178,195-382,394-416,427-523,535-609
View the alignment between query and template
View the model in PyMOL
Template: 3RED, chain A
Confidence level:confident
Coverage over the Query: 23-146,168-334,347-410,428-602
View the alignment between query and template
View the model in PyMOL