Diaphorina citri psyllid: psy7710

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470---
MSSSQSPTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKEFFSMSSSQSPALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFGVKAIHSPHTGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPEMVDSMNEYEF
ccccccccCEEEEEEcccEEEccHHHHHHHccccccccHHHHcccccccccccccccccEEEEcccHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHHHcccccEEEccHHHHHHHcccccEEEEEEccccCECcHHHHHHHHHHHHHHcccEEEcccEEEEEEEcccCEEEEEccccEEEEcEEEEcccccHHHHHHHccccccccEEcccCEEEECcccccccccccECccccccccccEEEECcccccCEEEccccEEcccccccccccccHHHHHHHHccccHHHHccccccccHHHHHHHHcHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHccccccccccccccccc
*****SP*LYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK*F********PALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFGVKAIHSPHTGIVDWGLVTRVMGEEFCELGGEIRLNQQVE*****************
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MSSSQSPTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKEFFSMSSSQSPALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVDDFGVKAIHSPHTGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPEMVDSMNEYEF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
L-2-hydroxyglutarate dehydrogenase, mitochondrial confidentQ55GI5
L-2-hydroxyglutarate dehydrogenase, mitochondrial confidentQ91YP0
L-2-hydroxyglutarate dehydrogenase, mitochondrial confidentQ9N4Z0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016021 [CC]integral to membraneprobableGO:0005575, GO:0044425, GO:0016020, GO:0031224
GO:0044267 [BP]cellular protein metabolic processprobableGO:0044238, GO:0044260, GO:0019538, GO:0009987, GO:0044237, GO:0043170, GO:0071704, GO:0008150, GO:0008152
GO:0047545 [MF]2-hydroxyglutarate dehydrogenase activityprobableGO:0003824, GO:0003674, GO:0016614, GO:0016491
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:0006103 [BP]2-oxoglutarate metabolic processprobableGO:0043648, GO:0044710, GO:0006082, GO:0044237, GO:0009987, GO:0019752, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:0043436
GO:0034419 [MF]L-2-hydroxyglutarate oxidase activityprobableGO:0016614, GO:0003973, GO:0003824, GO:0003674, GO:0016899, GO:0016491
GO:0005743 [CC]mitochondrial inner membraneprobableGO:0019866, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0031090, GO:0016020, GO:0005740, GO:0005739, GO:0031967, GO:0031966, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0050660 [MF]flavin adenine dinucleotide bindingprobableGO:0043168, GO:0050662, GO:0097159, GO:0043167, GO:0036094, GO:0048037, GO:0005488, GO:0003674, GO:0000166, GO:1901363, GO:1901265

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.99.-With other acceptors.probable
1.1.99.22-hydroxyglutarate dehydrogenase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3DME, chain A
Confidence level:very confident
Coverage over the Query: 56-342,373-445
View the alignment between query and template
View the model in PyMOL
Template: 1PJ5, chain A
Confidence level:very confident
Coverage over the Query: 57-459
View the alignment between query and template
View the model in PyMOL
Template: 3DME, chain A
Confidence level:confident
Coverage over the Query: 8-44
View the alignment between query and template
View the model in PyMOL