Diaphorina citri psyllid: psy7734


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MSVHSGSNESDAWALLALKSTSPSPSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQVNYTYLDTTSVVAW
cccccccccccHHHHHHccccccccccccccccccEEEEEEcccEEEEEccEEEEccccccccccccccccHHHHHHHHHHHHcccccEEEEcccccEEccccEEccccccccccccccccccccccccEEEEccccHHHHcHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHccccccccccccccccCEEcccccEEcc
*****************************WKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKV***********FWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVN*****************VMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSAD***************************KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQVNYTYLDTTSVVAW
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSVHSGSNESDAWALLALKSTSPSPSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQVNYTYLDTTSVVAW

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043565 [MF]sequence-specific DNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0003700 [MF]sequence-specific DNA binding transcription factor activityprobableGO:0003674, GO:0001071
GO:0045892 [BP]negative regulation of transcription, DNA-dependentprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0010558, GO:0048523
GO:0006351 [BP]transcription, DNA-dependentprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0019438
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0006357 [BP]regulation of transcription from RNA polymerase II promoterprobableGO:0009889, GO:0019219, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0006355, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0045893 [BP]positive regulation of transcription, DNA-dependentprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0009891, GO:2000112, GO:0019219, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0010556, GO:0048522
GO:0030308 [BP]negative regulation of cell growthprobableGO:0045926, GO:0040008, GO:0051128, GO:0008150, GO:0001558, GO:0065007, GO:0048519, GO:0050794, GO:0050789, GO:0048523

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2HFH, chain A
Confidence level:very confident
Coverage over the Query: 40-147
View the alignment between query and template
View the model in PyMOL
Template: 2C6Y, chain A
Confidence level:very confident
Coverage over the Query: 288-348
View the alignment between query and template
View the model in PyMOL
Template: 1GXC, chain A
Confidence level:confident
Coverage over the Query: 35-106
View the alignment between query and template
View the model in PyMOL