Diaphorina citri psyllid: psy7748


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230--
MASGNTGDRTWGSSAWNLAATEVYGRPSTNLNDFIELTQSDLKDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPKYKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEINQALNAKPVPVKVDTSR
cccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccEEEEEEcccccEEEEEEcccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHccccccccccccCEEcccccccEEEEEEEEEEccccHHHHHHHccccccccccccccccccccEEcccccccHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHcccccccccccc
**********WGSSAWNLAATEVYGRPSTNLNDFIELTQSDLKDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPKYKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEIN****************
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MASGNTGDRTWGSSAWNLAATEVYGRPSTNLNDFIELTQSDLKDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPKYKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEINQALNAKPVPVKVDTSR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
U8 snoRNA-decapping enzyme RNA-decapping enzyme that binds specifically to U8 snoRNA. Part of the U8 snoRNP complex that is required for the accumulation of mature 5.8S and 28S rRNA. Has diphosphatase activity and removes m7G and m227G caps from U8 snoRNA. Has broad substrate specificity with manganese or cobalt as cofactor and can act on various RNA species (in vitro).confidentA1A4Q9
U8 snoRNA-decapping enzyme RNA-decapping enzyme that binds specifically to U8 snoRNA. Part of the U8 snoRNP complex that is required for the accumulation of mature 5.8S and 28S rRNA. Has diphosphatase activity and removes m7G and m227G caps from U8 snoRNA. Has broad substrate specificity with manganese or cobalt as cofactor and can act on various RNA species (in vitro).confidentQ6P3D0
U8 snoRNA-decapping enzyme RNA-decapping enzyme that binds specifically to U8 snoRNA. Part of the U8 snoRNP complex that is required for the accumulation of mature 5.8S and 28S rRNA. Has diphosphatase activity and removes m7G and m227G caps from U8 snoRNA. Has broad substrate specificity with manganese or cobalt as cofactor and can act on various RNA species (in vitro).confidentQ96DE0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0006382 [BP]adenosine to inosine editingprobableGO:0016070, GO:0006139, GO:0044260, GO:0044238, GO:0006725, GO:0009987, GO:0016553, GO:0034641, GO:0044237, GO:0009451, GO:0090304, GO:0071704, GO:0043412, GO:0006807, GO:0008150, GO:0008152, GO:0043170, GO:1901360, GO:0046483
GO:0050072 [MF]m7G(5')pppN diphosphatase activityprobableGO:0016787, GO:0016818, GO:0003824, GO:0016817, GO:0016462, GO:0003674
GO:1901640 [MF]XTP bindingprobableGO:0043168, GO:0035639, GO:0097159, GO:0043167, GO:0036094, GO:0003674, GO:1901265, GO:0032555, GO:0017076, GO:0000166, GO:1901363, GO:0032553, GO:0005488
GO:2000233 [BP]negative regulation of rRNA processingprobableGO:0009892, GO:0080090, GO:0019222, GO:0031324, GO:0031323, GO:0050789, GO:0090069, GO:0010605, GO:0019219, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0060255, GO:0050794, GO:0008150, GO:0051171, GO:0051172, GO:0051253, GO:0051252, GO:2000232, GO:0044087, GO:0048523
GO:0030515 [MF]snoRNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0090068 [BP]positive regulation of cell cycle processprobableGO:0051726, GO:0010564, GO:0050794, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:0005525 [MF]GTP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0019001, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032561, GO:0032553, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0046709 [BP]IDP catabolic processprobableGO:0009185, GO:0009181, GO:0009166, GO:0034641, GO:0006807, GO:0044237, GO:0072521, GO:0072523, GO:0046434, GO:0009259, GO:1901360, GO:1901361, GO:0046700, GO:0006139, GO:1901575, GO:0006195, GO:0009179, GO:0071704, GO:0055086, GO:0009191, GO:0046483, GO:0009987, GO:0044238, GO:0046707, GO:0009154, GO:0006725, GO:0044710, GO:0009150, GO:0009261, GO:0019637, GO:0009117, GO:0008152, GO:0034655, GO:0009132, GO:0009135, GO:0009134, GO:0009137, GO:1901565, GO:0044248, GO:1901564, GO:0044270, GO:1901136, GO:1901135, GO:0019693, GO:0006163, GO:0006796, GO:1901292, GO:0006793, GO:0019439, GO:0008150, GO:0006753, GO:0009056, GO:0044281
GO:0030145 [MF]manganese ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:2000781 [BP]positive regulation of double-strand break repairprobableGO:0009893, GO:0019222, GO:0031325, GO:0048584, GO:0048583, GO:0045935, GO:0050789, GO:0080090, GO:0010604, GO:0019219, GO:0065007, GO:0048518, GO:0051054, GO:0006282, GO:0051052, GO:0060255, GO:0031323, GO:0050794, GO:0008150, GO:0051171, GO:0051173, GO:2001020, GO:2001022, GO:0080134, GO:0080135, GO:2000779, GO:0045739, GO:0048522
GO:0016077 [BP]snoRNA catabolic processprobableGO:0090304, GO:0034641, GO:0006807, GO:0034661, GO:0034660, GO:1901360, GO:1901361, GO:0006139, GO:1901575, GO:0044265, GO:0044260, GO:0071704, GO:0006401, GO:0009987, GO:0006725, GO:0046700, GO:0008150, GO:0008152, GO:0034655, GO:0009056, GO:0009057, GO:0044248, GO:0046483, GO:0016070, GO:0044238, GO:0016074, GO:0044270, GO:0044237, GO:0043170, GO:0019439
GO:0008235 [MF]metalloexopeptidase activityprobableGO:0016787, GO:0003824, GO:0008238, GO:0070011, GO:0003674, GO:0008233, GO:0008237
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0000287 [MF]magnesium ion bindingprobableGO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:1901641 [MF]ITP bindingprobableGO:0043168, GO:0035639, GO:0097159, GO:0043167, GO:0036094, GO:0003674, GO:1901265, GO:0032555, GO:0017076, GO:0000166, GO:1901363, GO:0032553, GO:0005488
GO:0008284 [BP]positive regulation of cell proliferationprobableGO:0042127, GO:0050794, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:1901639 [BP]XDP catabolic processprobableGO:0009185, GO:0009181, GO:0009166, GO:0034641, GO:0006807, GO:0044237, GO:0072521, GO:0072523, GO:0046434, GO:0009259, GO:1901360, GO:1901361, GO:0046700, GO:0006139, GO:1901575, GO:0006195, GO:0009179, GO:0071704, GO:0055086, GO:0009191, GO:0046483, GO:0009987, GO:0044238, GO:0009154, GO:0006725, GO:0044710, GO:0009150, GO:0009261, GO:0019637, GO:0009117, GO:0008152, GO:0034655, GO:0009132, GO:0009135, GO:0009134, GO:0009137, GO:1901565, GO:0044248, GO:1901564, GO:0044270, GO:1901136, GO:1901135, GO:0019693, GO:0006163, GO:0006796, GO:1901292, GO:0006793, GO:0019439, GO:0008150, GO:0006753, GO:0009056, GO:0044281
GO:0003729 [MF]mRNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0019204 [MF]nucleotide phosphatase activityprobableGO:0016787, GO:0016791, GO:0016788, GO:0042578, GO:0003824, GO:0003674
GO:0006402 [BP]mRNA catabolic processprobableGO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:1901361, GO:0006139, GO:1901575, GO:0044265, GO:0044260, GO:0071704, GO:0006401, GO:0044238, GO:0009987, GO:0006725, GO:0046700, GO:0008150, GO:0008152, GO:0034655, GO:0009056, GO:0009057, GO:0044248, GO:0046483, GO:0016070, GO:0016071, GO:0044270, GO:0044237, GO:0043170, GO:0019439
GO:0050897 [MF]cobalt ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1U20, chain A
Confidence level:very confident
Coverage over the Query: 22-40,51-222
View the alignment between query and template
View the model in PyMOL