Diaphorina citri psyllid: psy7749

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MNFYMEPQFNETTLGPNWFIKSGFYCNLKTDIVLFCVILRDSHGVAQVRFVSGNKILRIMKAMGLAPNLPEDLYCLIKKAVAIRKHLERSRKDKDSKFRLILVESRIHRLARYYKTKAVLPPNWKYESATASAFILEGFRFRTRRGFRYKIDLVGLLDDNFYNKKSLKMGRMHTPGKGISKSALPYRRSVPNWLKLTSEDVKDHIFKLSKKGLTPSQIGVILRDSHGVAQVRFVSGNKILRIMKAMGLAPNLPEDLYCLIKKAVAIRKHLERSRKDKDSKFRLILVESRIHRLARYYKTKAVLPPNWKYESATASALVA
ccccccccccccccccccEEEcccEEcccccEEEEEHHHHcccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccEEEECccccEEEHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccHHcccccccccEEEccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHc
**FYM**QFNETTLGPNWFIKSGFYCNLKTDIVLFCVILRDSHGVAQVRFVSGNKILRIMKAMGLAPNLPEDLYCLIKKAVAIRKHLE*****KDSKFRLILVESRIHRLARYYKTKAVLPPNWKYESATASAFILEGFRFRTRRGFRYKIDLVGLLDDNFYNKKSLKMG*************LPYRRSVPNWLKLTSEDVKDHIFKLSKKGLTPSQIGVILRDSHGVAQVRFVSGNKILRIMKAMGLAPNLPEDLYCLIKKAVAIRKHLE*****KDSKFRLILVESRIHRLARYYKTKAVLPPNWKYESATASAL*A
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MNFYMEPQFNETTLGPNWFIKSGFYCNLKTDIVLFCVILRDSHGVAQVRFVSGNKILRIMKAMGLAPNLPEDLYCLIKKAVAIRKHLERSRKDKDSKFRLILVESRIHRLARYYKTKAVLPPNWKYESATASAFILEGFRFRTRRGFRYKIDLVGLLDDNFYNKKSLKMGRMHTPGKGISKSALPYRRSVPNWLKLTSEDVKDHIFKLSKKGLTPSQIGVILRDSHGVAQVRFVSGNKILRIMKAMGLAPNLPEDLYCLIKKAVAIRKHLERSRKDKDSKFRLILVESRIHRLARYYKTKAVLPPNWKYESATASALVA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
40S ribosomal protein S13 confidentQ56JX8
40S ribosomal protein S13 confidentQ6ITC7
40S ribosomal protein S13 confidentP52811

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0022626 [CC]cytosolic ribosomeconfidentGO:0005737, GO:0032991, GO:0005840, GO:0043232, GO:0005829, GO:0044464, GO:0043229, GO:0005623, GO:0030529, GO:0005575, GO:0044444, GO:0044445, GO:0044424, GO:0043228, GO:0005622, GO:0043226
GO:0005730 [CC]nucleolusconfidentGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0022627 [CC]cytosolic small ribosomal subunitprobableGO:0005737, GO:0005575, GO:0005622, GO:0022626, GO:0015935, GO:0043232, GO:0005829, GO:0044464, GO:0043229, GO:0005623, GO:0044391, GO:0044446, GO:0044444, GO:0044445, GO:0044424, GO:0032991, GO:0043228, GO:0030529, GO:0043226, GO:0044422, GO:0005840
GO:0033119 [BP]negative regulation of RNA splicingprobableGO:0051252, GO:0010605, GO:0045934, GO:0019222, GO:0008150, GO:0060255, GO:0031323, GO:0051253, GO:0043484, GO:0031324, GO:0050794, GO:0050789, GO:0019219, GO:0065007, GO:0051171, GO:0051172, GO:0048519, GO:0009892, GO:0010468, GO:0048523, GO:0080090
GO:0030686 [CC]90S preribosomeprobableGO:0032991, GO:0044464, GO:0030684, GO:0005623, GO:0030529, GO:0005575, GO:0044424, GO:0005622
GO:0003729 [MF]mRNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0070181 [MF]SSU rRNA bindingprobableGO:0097159, GO:0019843, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0016020 [CC]membraneprobableGO:0005575
GO:0009507 [CC]chloroplastprobableGO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0003735 [MF]structural constituent of ribosomeprobableGO:0003674, GO:0005198
GO:0009965 [BP]leaf morphogenesisprobableGO:0032502, GO:0048513, GO:0009887, GO:0032501, GO:0044707, GO:0048856, GO:0048367, GO:0044767, GO:0048366, GO:0048827, GO:0008150, GO:0010016, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0000462 [BP]maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)probableGO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0006139, GO:0044260, GO:0042274, GO:0071840, GO:0042254, GO:0071704, GO:0010467, GO:0006364, GO:0022613, GO:0034470, GO:0009987, GO:0006725, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0016072, GO:0030490, GO:0044237, GO:0043170, GO:0044085, GO:0006396
GO:0000911 [BP]cytokinesis by cell plate formationprobableGO:0000910, GO:0009987, GO:0008150, GO:0044763, GO:0007049, GO:0051301, GO:0022402, GO:0044699
GO:0019083 [BP]viral transcriptionprobableGO:0048610, GO:0032774, GO:0019080, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:1901362, GO:1901360, GO:0006139, GO:0000003, GO:0044260, GO:0071704, GO:0019058, GO:0051704, GO:0018130, GO:1901576, GO:0009987, GO:0006725, GO:0022415, GO:0022414, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044703, GO:0044271, GO:0044237, GO:0043170, GO:0044764, GO:0016032, GO:0019438
GO:0006614 [BP]SRP-dependent cotranslational protein targeting to membraneprobableGO:0008104, GO:0006613, GO:0006612, GO:0044699, GO:0070972, GO:0070727, GO:0006886, GO:0071702, GO:0016482, GO:0006810, GO:0072599, GO:0072594, GO:0034613, GO:0006605, GO:0045184, GO:0015031, GO:0044765, GO:0008150, GO:0051649, GO:0051234, GO:0051179, GO:0051641, GO:0033036, GO:0046907, GO:0045047, GO:0033365, GO:0044763, GO:0009987
GO:0008406 [BP]gonad developmentprobableGO:0032502, GO:0007548, GO:0032501, GO:0048608, GO:0000003, GO:0044707, GO:0022414, GO:0061458, GO:0048856, GO:0045137, GO:0044767, GO:0003006, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0016477 [BP]cell migrationprobableGO:0040011, GO:0048870, GO:0009987, GO:0006928, GO:0051674, GO:0044763, GO:0008150, GO:0051179, GO:0044699
GO:0010090 [BP]trichome morphogenesisprobableGO:0030154, GO:0048468, GO:0032501, GO:0010026, GO:0008544, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0008150, GO:0048513, GO:0071840, GO:0030855, GO:0032502, GO:0009987, GO:0060429, GO:0009888, GO:0044767, GO:0044763, GO:0044707, GO:0009913, GO:0048856, GO:0048731
GO:0002119 [BP]nematode larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0002181 [BP]cytoplasmic translationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576, GO:0006412
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0000184 [BP]nuclear-transcribed mRNA catabolic process, nonsense-mediated decayprobableGO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:1901361, GO:0006139, GO:1901575, GO:0044265, GO:0044260, GO:0071704, GO:0006401, GO:0006402, GO:0044238, GO:0009987, GO:0006725, GO:0046700, GO:0008150, GO:0008152, GO:0034655, GO:0009056, GO:0009057, GO:0044248, GO:0046483, GO:0016070, GO:0016071, GO:0044270, GO:0044237, GO:0043170, GO:0000956, GO:0019439
GO:0000022 [BP]mitotic spindle elongationprobableGO:0006996, GO:0044699, GO:0007017, GO:0007010, GO:0000278, GO:0071822, GO:0043933, GO:0071840, GO:0009987, GO:0000226, GO:0008150, GO:0007051, GO:0007052, GO:0022402, GO:0007049, GO:0044763, GO:0051231, GO:0016043
GO:0040007 [BP]growthprobableGO:0008150
GO:0043581 [BP]mycelium developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0008150, GO:0007275, GO:0044699
GO:0006413 [BP]translational initiationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0044763, GO:0034645, GO:1901576, GO:0008150, GO:0006412, GO:0044699
GO:0006415 [BP]translational terminationprobableGO:0043933, GO:0044249, GO:0034645, GO:0043241, GO:0044699, GO:0044267, GO:0032984, GO:0044260, GO:0016043, GO:0008150, GO:0071704, GO:0010467, GO:0071840, GO:1901576, GO:0009987, GO:0009058, GO:0009059, GO:0044763, GO:0008152, GO:0043624, GO:0044238, GO:0071822, GO:0019538, GO:0044237, GO:0043170, GO:0022411, GO:0006412
GO:0006414 [BP]translational elongationprobableGO:0071704, GO:0044267, GO:0044238, GO:0008152, GO:0044260, GO:1901576, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:0006412

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XZM, chain O
Confidence level:very confident
Coverage over the Query: 172-319
View the alignment between query and template
View the model in PyMOL
Template: 3U5C, chain N
Confidence level:very confident
Coverage over the Query: 12-136
View the alignment between query and template
View the model in PyMOL