Diaphorina citri psyllid: psy7785

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-----
MEMAFNQQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA
cccHHHHHHHHcccccccccEECccccHccccHHHHHHHHHHcccccEEEEEEEEccccccccccccccccEEEEcccccHHHHHHHHccccEEcccccccccEEEEEEEEccccccccEEEEEEEEcccccEEEEEcccccccHHHHHHHccccCEEEEccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEEcccEEEcccccEEEEEEECcccccccccccccccccccccccHHHHHHHcccccEEEccccEEEEEccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHccccEEEcccHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHccccccEEECcccccccHHHHHHHHccccccEEEEEccccHHHHHHHHHcccccEEEcccHHHHHHHHHHc
MEMAFNQQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA
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MEMAFNQQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial Catalyzes the GTP-dependent ligation of succinate and CoA to form succinyl-CoA.confidentQ96I99
Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial confidentQ869S7
Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial Catalyzes the GTP-dependent ligation of succinate and CoA to form succinyl-CoA.confidentQ3MHX5

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006099 [BP]tricarboxylic acid cycleprobableGO:0044238, GO:0044710, GO:0015980, GO:0009987, GO:0044237, GO:0009060, GO:0008150, GO:0008152, GO:0045333, GO:0006091, GO:0055114
GO:0006105 [BP]succinate metabolic processprobableGO:0043648, GO:0044710, GO:0006082, GO:0044237, GO:0009987, GO:0019752, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:0043436
GO:0006104 [BP]succinyl-CoA metabolic processprobableGO:0035383, GO:0051186, GO:0006637, GO:0006732, GO:0009987, GO:0044237, GO:0071704, GO:0008150, GO:0008152, GO:0006793
GO:0045244 [CC]succinate-CoA ligase complex (GDP-forming)probableGO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0005739, GO:0005759, GO:0030062, GO:0045239, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0042709, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0046982 [MF]protein heterodimerization activityprobableGO:0046983, GO:0003674, GO:0005488, GO:0005515
GO:0005507 [MF]copper ion bindingprobableGO:0043169, GO:0046914, GO:0043167, GO:0003674, GO:0005488, GO:0046872
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0019003 [MF]GDP bindingprobableGO:0043168, GO:0017076, GO:0019001, GO:0097159, GO:1901363, GO:1901265, GO:0043167, GO:0036094, GO:0032561, GO:0003674, GO:0032553, GO:0032549, GO:0032555, GO:0005488, GO:0000166, GO:0032550, GO:0001883, GO:0001882
GO:0004775 [MF]succinate-CoA ligase (ADP-forming) activityprobableGO:0016878, GO:0016405, GO:0003824, GO:0003674, GO:0004774, GO:0016874, GO:0016877
GO:0004776 [MF]succinate-CoA ligase (GDP-forming) activityprobableGO:0016878, GO:0016405, GO:0003824, GO:0003674, GO:0004774, GO:0016874, GO:0016877

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.2.-.-Forming carbon-sulfur bonds.probable
6.2.1.-Acid--thiol ligases.probable
6.2.1.5Succinate--CoA ligase (ADP-forming).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FP4, chain B
Confidence level:very confident
Coverage over the Query: 11-181,215-430
View the alignment between query and template
View the model in PyMOL
Template: 2FP4, chain B
Confidence level:very confident
Coverage over the Query: 445-491
View the alignment between query and template
View the model in PyMOL
Template: 2CSU, chain A
Confidence level:probable
Coverage over the Query: 302-523
View the alignment between query and template
View the model in PyMOL