Diaphorina citri psyllid: psy7791

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-
MLDIATQQESSEPKTSTNILSSKTGGAYIPPAKLKLMQQSISDKSSVEYQRISWETLKKSIHGSVNKVNTGNIGIIARKLFQENIIRGRGLLTRTILQAQAASPTFTNVYAALVDIINSKFPSIGELLLNRCIQQFKRSFKRNDKALCINSVTFIAHLVNQQVAHEIIVLEILTLLVETPTNDSDFSLEPYSKHKLHHLRSLMCMPLWWISSIQSFQALESFFSTDVYNSSKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILGDEDEDDEDGDDEEDEDEEESEAEEGEKENKETIIDNTETNLVALRRTIYLTIHSSLDFEECAHKLLRMQLKPGQESELCHIVHIDTSLWGLFGDQLRTYEKFFGLLAQRFCQINKMYVAPLEQIFRESYSTVHRLDINKLRDDVCVINVVVKINGLTRLQFLYLSSNVVSNYDKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDP
cccccccccccccccccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEECccccccHHcccccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHccccccccHHHcHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccHHHcccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHccc
**************************AYIP*****************EYQRISWETLKKSIHGSVNKVNTGNIGIIARKLFQENIIRGRGLLTRTILQAQAASPTFTNVYAALVDIINSKFPSIGELLLNRCIQQFKRSFKRNDKALCINSVTFIAHLVNQQVAHEIIVLEILTLLVETPTNDSDFSLEPYSKHKLHHLRSLMCMPLWWISSIQSFQALESFFSTDVYNSSKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREI**********************************IIDNTETNLVALRRTIYLTIHSSLDFEECAHKLLRMQLKPGQESELCHIVHIDTSLWGLFGDQLRTYEKFFGLLAQRFCQINKMYVAPLEQIFRESYSTVHRLDINKLRDDVCVINVVVKINGLTRLQFLYLSSNVVSNYDKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIK**
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MLDIATQQESSEPKTSTNILSSKTGGAYIPPAKLKLMQQSISDKSSVEYQRISWETLKKSIHGSVNKVNTGNIGIIARKLFQENIIRGRGLLTRTILQAQAASPTFTNVYAALVDIINSKFPSIGELLLNRCIQQFKRSFKRNDKALCINSVTFIAHLVNQQVAHEIIVLEILTLLVETPTNDSDFSLEPYSKHKLHHLRSLMCMPLWWISSIQSFQALESFFSTDVYNSSKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILGDEDEDDEDGDDEEDEDEEESEAEEGExxxxxxxxxxxxxxxxxxxxxIYLTIHSSLDFEECAHKLLRMQLKPGQESELCHIVHIDTSLWGLFGDQLRTYEKFFGLLAQRFCQINKMYVAPLEQIFRESYSTVHRLDINKLRDDVCVINVVVKINGLTRLQFLYLSSNVVSNYDKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Pre-mRNA-splicing factor CWC22 homolog May be involved in pre-mRNA splicing.confidentQ08C72
Pre-mRNA-splicing factor CWC22 homolog May be involved in pre-mRNA splicing.confidentQ9VJ87
Pre-mRNA-splicing factor CWC22 homolog May be involved in pre-mRNA splicing.confidentQ8C5N3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031981 [CC]nuclear lumenprobableGO:0005575, GO:0043231, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1H2V, chain C
Confidence level:very confident
Coverage over the Query: 59-320,339-453,489-537
View the alignment between query and template
View the model in PyMOL
Template: 2VSO, chain E
Confidence level:very confident
Coverage over the Query: 26-31,47-203,214-255
View the alignment between query and template
View the model in PyMOL