Diaphorina citri psyllid: psy7893

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-

MEMKVLKDTKILPDPYYEYLDELRDSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQVGNDISNIEAVRFQLKTQFDKNVVTHYDIQEQIFDYAFSHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPVPNLTTEQQKDRRKELAKKLVEMNAKKREERLVDDERHLNELLELREIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGEDLTEEPKAKLSKEIAVPESEAEFKAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGMRDEDWDVYKVINKDAGDTDSEEEQERLIELEEILRQHDPEFTSLNQEQELSPKEANQLHIGVERMCGPECLFQPSMLGSIQAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRVHPCSNKFEPYPLVISLDEPIITNAEGDGEDTVILM

ccEEEEcccccccccccccccccccccccEEEEccccCEECcCCccccccccccccHccccccccccccccCCcccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEEEccccccHHcHHHHHHHHHHHcccccEEEEcHHHHHHHHccccccccccccccccccccccccccCEEEEEcccccCEEEEEEccccccccHHHcccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccHHHHHHHHccccccccccEEEECccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHcccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHccEEEcccccccccHHHHHHHHHHHccccccEEEEECcccccccHHccHHHcccccccccccECHHHHHcccccEEEECcccccccccccccccccccccccccccccccccc

*EMKVLKDTKILPDPYYEYLDELRDSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRK****KDGETQVGNDISNIEAVRFQLKTQFDKNVVTHYDIQEQIFDYAFSHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPVPN***********ELAKKLVEMN***********ERHLNELLELREIV*************F*SMGINNIQDLNKS************AKIIAY*************************EFKAWLIETKKKRAYII***********************************KRDDDFGMRDEDWDVYKVINKDAG*TDSEEEQERLIELEEILRQHDPEFTS********PKEANQLHIGVERMCGPECLFQPSMLGSIQAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRVHPCSNKFEPYPLVISLDEPIITN*******TVILM

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MEMKVLKDTKILPDPYYEYLDELRDSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQVGNDISNIEAVRFQLKTQFDKNVVTHYDIQEQIFDYAFSHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPVPNLTxxxxxxxxxxxxxxxxxxxxxKREERLVDDERHLNELLELREIVELTPSDHSHAREAFKSMGINNxxxxxxxxxxxxxxxxxxxxxxxxxxxxEDLTEEPKAKLSKEIAVPESEAEFKAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGMRDEDWDVYKVINKDAGDTDSEEEQERLIELEEILRQHDPEFTSLNQEQELSPKEANQLHIGVERMCGPECLFQPSMLGSIQAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRVHPCSNKFEPYPLVISLDEPIITNAEGDGEDTVILM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Actin-related protein 5	Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	confident	Q9VEC3
Actin-related protein 5	Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.	confident	Q293V2
Actin-related protein 5	Probable subunit of a chromatin-remodeling complex. Involved in DNA repair. Required for multicellular development of all organs.	confident	Q940Z2

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0031011 [CC]	Ino80 complex	probable	GO:0033202, GO:0031974, GO:0043229, GO:0043228, GO:0000785, GO:0000228, GO:0043227, GO:0043226, GO:0005575, GO:0070603, GO:0031981, GO:0005634, GO:0044454, GO:0005694, GO:0000790, GO:0043234, GO:0032991, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0097346, GO:0044428, GO:0044424, GO:0044427, GO:0044422

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1K8K, chain A
Confidence level:very confident
Coverage over the Query: 25-175,187-277,389-391,462-477,525-659
View the alignment between query and template
View the model in PyMOL

Template: 4FO0, chain A
Confidence level:confident
Coverage over the Query: 27-175,192-272,283-300,344-346,364-366,407-410,462-484
View the alignment between query and template
View the model in PyMOL

Template: 1I84, chain S
Confidence level:probable
Coverage over the Query: 387-453
View the alignment between query and template
View the model in PyMOL