Psyllid ID: psy7893
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 691 | 2.2.26 [Sep-21-2011] | |||||||
| Q17GZ9 | 655 | Actin-related protein 5 O | N/A | N/A | 0.920 | 0.970 | 0.470 | 1e-174 | |
| Q9VEC3 | 648 | Actin-related protein 5 O | yes | N/A | 0.888 | 0.947 | 0.400 | 1e-136 | |
| Q293V2 | 651 | Actin-related protein 5 O | yes | N/A | 0.887 | 0.941 | 0.409 | 1e-130 | |
| Q9Y7X8 | 721 | Actin-like protein arp5 O | yes | N/A | 0.895 | 0.858 | 0.297 | 3e-89 | |
| Q5ZJA4 | 611 | Actin-related protein 5 O | yes | N/A | 0.525 | 0.594 | 0.411 | 4e-80 | |
| P53946 | 755 | Actin-related protein 5 O | yes | N/A | 0.876 | 0.802 | 0.280 | 5e-75 | |
| Q940Z2 | 724 | Actin-related protein 5 O | yes | N/A | 0.876 | 0.837 | 0.307 | 2e-72 | |
| Q9H9F9 | 607 | Actin-related protein 5 O | yes | N/A | 0.522 | 0.594 | 0.394 | 2e-71 | |
| Q80US4 | 605 | Actin-related protein 5 O | yes | N/A | 0.529 | 0.604 | 0.382 | 9e-71 | |
| A2ZP58 | 575 | Actin-related protein 5 O | yes | N/A | 0.716 | 0.860 | 0.272 | 1e-37 |
| >sp|Q17GZ9|ARP5_AEDAE Actin-related protein 5 OS=Aedes aegypti GN=Arp5 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 321/682 (47%), Positives = 439/682 (64%), Gaps = 46/682 (6%)
Query: 1 MEMKVLKDTKILPDPYYEYLDELRDSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKP 60
M + ++D K+ PD Y D IV DNG++ CR GWA + P+L+FKN++AKP
Sbjct: 1 MSLFDIEDIKVKPDIVCTYPDPTVPPDAAIVIDNGSYHCRAGWAGKDVPSLVFKNVLAKP 60
Query: 61 RKERGKKDGE------TQVGNDISNIEAVRFQLKTQFDKNVVTHYDIQEQIFDYAFSHLS 114
RK+R KKD Q+GNDI+NIEAVRFQL+TQFD+NVVTH +QEQIFDY F L
Sbjct: 61 RKDRSKKDTSEVVVPTVQIGNDITNIEAVRFQLRTQFDRNVVTHLHVQEQIFDYLFGRLG 120
Query: 115 INTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSG 174
IN +G V HP++LTE NPNYSR LMSEL+FECY +P + Y +D L SY+ NG + SG
Sbjct: 121 INADGCVPHPVLLTECVANPNYSRMLMSELMFECYGIPGIVYAVDGLLSYRMNGGQ-DSG 179
Query: 175 VIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLH 234
+I+ SCGYQ THVIPV+NG + K +RI+LGGF++I+ +
Sbjct: 180 LIV--------------------SCGYQATHVIPVLNGRMVEDKVRRINLGGFNMINFMF 219
Query: 235 KLLQLKYPSHINSITPSRSEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPY--A 292
+LLQLKYP H+N+IT SR+E ++ +Y A DY E LR W EFY+ NV+K+QLPY
Sbjct: 220 RLLQLKYPVHVNAITLSRAETMIHNYCSFAYDYTESLRNWALLEFYEQNVIKIQLPYNQN 279
Query: 293 VPVPNLTTEQQKDRRKELAKKLVEMNAKKREERLVDDERHLNELLELREIVELTPSDHSH 352
V P LT EQ+ ++RKEL+++L E+N +KREE+L +D+ L +L E T D +
Sbjct: 280 VSAPTLTAEQRLEKRKELSRRLAEINLRKREEKLAEDKVLLTRMLA----AEDTLDDEDN 335
Query: 353 AREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGEDLTEEPKAKLSKEIAVPES 412
+ N+ + K I L+++I KT K+ N + +P+ K ++ P
Sbjct: 336 VGFTLHEFSVKNVDEYRKMIVTLRERIAKTTQKM----NSQQTNNQPEEK-PLQLLQPPP 390
Query: 413 EAEFKAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDF 472
+ W+IET++KR I+DKK RKQR+QDLAKRRTAAAQERMR+IS LA+KEK DDF
Sbjct: 391 NMTIEEWVIETRRKRDEILDKKQIRKQRKQDLAKRRTAAAQERMRIISHLAKKEKGVDDF 450
Query: 473 GMRDEDWDVYKVINKDAGDTDSEEEQERLIELEEILRQHDPEFTSLNQEQELSP---KEA 529
GMRDEDWDVYK I+++ GD+DS+ E E+LIE EEIL+QHD F E ++P E
Sbjct: 451 GMRDEDWDVYKSISRE-GDSDSDAENEKLIECEEILKQHDSTFV----EPVVAPGNIAEF 505
Query: 530 NQLHIGVERMCGPECLFQPSMLGSIQAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQ 589
+QLHIGVER+ PE LFQPSM+G +AG++ T+++VL +P+ L N+ +TG
Sbjct: 506 HQLHIGVERIRVPEILFQPSMIGVQEAGLTGTIDYVLKLFPKEDQVKLVGNVMLTGGCAN 565
Query: 590 LPGFVERLNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLSENFHDFAVTQSDYQEK 649
+ GF ERL+++L PFQS +++ +A +P LDAW GA QF+ S+ F +T+ Y E
Sbjct: 566 IRGFKERLSRELQAILPFQSVYNLMVAGSPSLDAWRGASQFANSQEFKQSLITRQLYDEC 625
Query: 650 GGEFFRVHPCSNKFEPYPLVIS 671
GGE+F+ H SN + P P +S
Sbjct: 626 GGEYFKEHTASNFYYPTPSQVS 647
|
Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. Aedes aegypti (taxid: 7159) |
| >sp|Q9VEC3|ARP5_DROME Actin-related protein 5 OS=Drosophila melanogaster GN=Arp5 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q293V2|ARP5_DROPS Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2 | Back alignment and function description |
|---|
| >sp|Q9Y7X8|ARP5_SCHPO Actin-like protein arp5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arp5 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q5ZJA4|ARP5_CHICK Actin-related protein 5 OS=Gallus gallus GN=ACTR5 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P53946|ARP5_YEAST Actin-related protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARP5 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q940Z2|ARP5_ARATH Actin-related protein 5 OS=Arabidopsis thaliana GN=ARP5 PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q9H9F9|ARP5_HUMAN Actin-related protein 5 OS=Homo sapiens GN=ACTR5 PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q80US4|ARP5_MOUSE Actin-related protein 5 OS=Mus musculus GN=Actr5 PE=2 SV=3 | Back alignment and function description |
|---|
| >sp|A2ZP58|ARP5_ORYSJ Actin-related protein 5 OS=Oryza sativa subsp. japonica GN=ARP5 PE=3 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 691 | ||||||
| 66546559 | 674 | PREDICTED: actin-related protein 5 [Apis | 0.962 | 0.986 | 0.525 | 0.0 | |
| 380013757 | 674 | PREDICTED: actin-related protein 5-like | 0.962 | 0.986 | 0.525 | 0.0 | |
| 193681033 | 669 | PREDICTED: actin-related protein 5-like | 0.931 | 0.962 | 0.546 | 0.0 | |
| 350405629 | 674 | PREDICTED: actin-related protein 5-like | 0.962 | 0.986 | 0.525 | 0.0 | |
| 340711120 | 674 | PREDICTED: actin-related protein 5-like | 0.962 | 0.986 | 0.523 | 0.0 | |
| 332028059 | 675 | Actin-related protein 5 [Acromyrmex echi | 0.959 | 0.982 | 0.530 | 0.0 | |
| 307207670 | 681 | Actin-related protein 5 [Harpegnathos sa | 0.933 | 0.947 | 0.536 | 0.0 | |
| 383857110 | 674 | PREDICTED: actin-related protein 5-like | 0.933 | 0.956 | 0.531 | 0.0 | |
| 322791717 | 644 | hypothetical protein SINV_08926 [Solenop | 0.911 | 0.978 | 0.538 | 0.0 | |
| 242013807 | 661 | conserved hypothetical protein [Pediculu | 0.943 | 0.986 | 0.508 | 0.0 |
| >gi|66546559|ref|XP_623919.1| PREDICTED: actin-related protein 5 [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/693 (52%), Positives = 504/693 (72%), Gaps = 28/693 (4%)
Query: 1 MEMKVLKDTKILPDPYYEYLDELRDSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKP 60
ME+ LKD K +PD + Y + ++ + P+V DNG++ CRVGWA+ ++P L+FKNLIAKP
Sbjct: 1 MEVLELKDVKPVPDIIHLYPNRVKSEATPLVIDNGSYNCRVGWATEKEPQLVFKNLIAKP 60
Query: 61 RKERGKKDGETQVGNDISNIEAVRFQLKTQFDKNVVTHYDIQEQIFDYAFSHLSINTEGN 120
RKERGKKDGE QVGNDI+NIEAVRFQLKTQFD+NVVTH++ QEQIFDY F+H+ I+TEG
Sbjct: 61 RKERGKKDGEPQVGNDITNIEAVRFQLKTQFDRNVVTHFEAQEQIFDYTFTHMGIDTEGA 120
Query: 121 VNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCG 180
VNHPI+LTE FLNPNYSR+LM+ELLFECY VP++ YG+D LFSYQ+N +C
Sbjct: 121 VNHPIILTEAFLNPNYSRNLMAELLFECYNVPAIAYGVDCLFSYQHN----------NCP 170
Query: 181 YQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLK 240
G+IIS GY TH+IP+++G D ++RI++GG+ + ++H+LLQLK
Sbjct: 171 -----------SDGLIISIGYHTTHIIPILDGKADPVNSRRINVGGYHITSYMHRLLQLK 219
Query: 241 YPSHINSITPSRSEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPV--PNL 298
YP H+N+ITPSR+EEL+ ++ +A +Y+E KW D ++YD NV++VQLPY P P L
Sbjct: 220 YPVHVNAITPSRAEELIHEHSMIALNYQEETSKWADPDYYDMNVLRVQLPYVAPANAPGL 279
Query: 299 TTEQQKDRRKELAKKLVEMNAKKREERLVDDERHLNELLELREIVELTPSDHSHAREAFK 358
T EQQK+R++ELA++L+E+NA+KREERL +DE LN+LL +++++E +D +A K
Sbjct: 280 TVEQQKERKRELARRLMEINARKREERLAEDEEQLNQLLAVQDLLEEGETDEFD--QALK 337
Query: 359 SMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGED--LTEEPKAKLSKEIAVPESEAEF 416
+ + N DL K IN LQ K+E+T+ KI+A N+ E+ EE K K+ + P+ + +F
Sbjct: 338 TYSLANEADLIKMINNLQAKVERTRQKIVAANSQEENIAMEEQKPKIKSSLQ-PKDQQDF 396
Query: 417 KAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGMRD 476
W+ +KKR I++++ A++QRRQD+AKRRTAAAQERMR+IS+LARKEKRDDDFGMRD
Sbjct: 397 DEWIASVRKKRQEILERRMAKRQRRQDMAKRRTAAAQERMRIISQLARKEKRDDDFGMRD 456
Query: 477 EDWDVYKVINKDAGDTDSEEEQERLIELEEILRQHDPEFTSLNQEQELSPKEANQLHIGV 536
EDWDVYKVIN++ GD+DSE EQE+L+ELE++LR HDPEF + P E +QLH+GV
Sbjct: 457 EDWDVYKVINREGGDSDSEVEQEKLMELEDVLRHHDPEFDGAGSNVPMVPGETHQLHVGV 516
Query: 537 ERMCGPECLFQPSMLGSIQAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVER 596
ER+ PE LFQPSM+GS++AGI+ET+ FVL YP + L NIF+TG + PG +ER
Sbjct: 517 ERLRAPEILFQPSMIGSVEAGIAETIEFVLKLYPSELQSRLVGNIFLTGGPTKFPGLLER 576
Query: 597 LNKDLLENRPFQSHFSVSLAENPELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRV 656
LN++L E RPF S+F +++A+N +DAW GAR F L+ N +F V++ +Y+EKGGE+F+
Sbjct: 577 LNRELREMRPFGSNFQINIAKNTSIDAWYGARDFGLNGNLPEFLVSKKEYEEKGGEYFKE 636
Query: 657 HPCSNKFEPYPLVISLDEPIITNAEGDGEDTVI 689
H SN + P + + +T+ + ED V+
Sbjct: 637 HSTSNTYTRSPDPLPTVQTPVTSEQVIVEDAVV 669
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380013757|ref|XP_003690915.1| PREDICTED: actin-related protein 5-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|193681033|ref|XP_001947910.1| PREDICTED: actin-related protein 5-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|350405629|ref|XP_003487499.1| PREDICTED: actin-related protein 5-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|340711120|ref|XP_003394128.1| PREDICTED: actin-related protein 5-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|332028059|gb|EGI68110.1| Actin-related protein 5 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|307207670|gb|EFN85307.1| Actin-related protein 5 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|383857110|ref|XP_003704049.1| PREDICTED: actin-related protein 5-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|322791717|gb|EFZ15993.1| hypothetical protein SINV_08926 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|242013807|ref|XP_002427592.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512007|gb|EEB14854.1| conserved hypothetical protein [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 691 | ||||||
| UNIPROTKB|Q17GZ9 | 655 | Arp5 "Actin-related protein 5" | 0.739 | 0.780 | 0.425 | 3.3e-160 | |
| FB|FBgn0038576 | 648 | Arp5 "Actin-related protein 5" | 0.888 | 0.947 | 0.390 | 1.4e-119 | |
| UNIPROTKB|Q293V2 | 651 | Arp5 "Actin-related protein 5" | 0.887 | 0.941 | 0.395 | 4.7e-119 | |
| UNIPROTKB|Q5ZJA4 | 611 | ACTR5 "Actin-related protein 5 | 0.253 | 0.286 | 0.454 | 5.6e-105 | |
| MGI|MGI:1924748 | 605 | Actr5 "ARP5 actin-related prot | 0.525 | 0.6 | 0.385 | 5.8e-103 | |
| UNIPROTKB|G3N1W1 | 611 | ACTR5 "Uncharacterized protein | 0.518 | 0.585 | 0.382 | 4.1e-102 | |
| UNIPROTKB|F1SDX1 | 608 | ACTR5 "Uncharacterized protein | 0.259 | 0.294 | 0.432 | 1.2e-101 | |
| RGD|1307958 | 611 | Actr5 "ARP5 actin-related prot | 0.525 | 0.594 | 0.380 | 1.4e-101 | |
| UNIPROTKB|F1PSS0 | 617 | ACTR5 "Uncharacterized protein | 0.279 | 0.312 | 0.385 | 6e-101 | |
| UNIPROTKB|Q9H9F9 | 607 | ACTR5 "Actin-related protein 5 | 0.516 | 0.588 | 0.382 | 7.5e-101 |
| UNIPROTKB|Q17GZ9 Arp5 "Actin-related protein 5" [Aedes aegypti (taxid:7159)] | Back alignment and assigned GO terms |
|---|
Score = 1041 (371.5 bits), Expect = 3.3e-160, Sum P(2) = 3.3e-160
Identities = 227/533 (42%), Positives = 320/533 (60%)
Query: 144 LLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQC 203
LL EC P+ + S ++ G G V G Y+ NG + SG+I+SCGYQ
Sbjct: 132 LLTECVANPNYSRMLMSELMFECYGIPGI--VYAVDGLLSYRMNGGQ-DSGLIVSCGYQA 188
Query: 204 THVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDYGFV 263
THVIPV+NG + K +RI+LGGF++I+ + +LLQLKYP H+N+IT SR+E ++ +Y
Sbjct: 189 THVIPVLNGRMVEDKVRRINLGGFNMINFMFRLLQLKYPVHVNAITLSRAETMIHNYCSF 248
Query: 264 ATDYREHLRKWLDAEFYDSNVVKVQLPYA--VPVPNLTTEQQKDRRKELAKKLVEMNAKK 321
A DY E LR W EFY+ NV+K+QLPY V P LT EQ+ ++RKEL+++L E+N +K
Sbjct: 249 AYDYTESLRNWALLEFYEQNVIKIQLPYNQNVSAPTLTAEQRLEKRKELSRRLAEINLRK 308
Query: 322 REERLVDDXXXXXXXXXXXXIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEK 381
REE+L +D E T D + + N+ + K I L+++I K
Sbjct: 309 REEKLAEDKVLLTRMLAA----EDTLDDEDNVGFTLHEFSVKNVDEYRKMIVTLRERIAK 364
Query: 382 TKAKIIAYNNGEDLTEEPKAKLSKEIAVPESEAEFKAWLIETKKKRAYIIDKKNARKQRR 441
T K+ N + +P+ K ++ P + W+IET++KR I+DKK RKQR+
Sbjct: 365 TTQKM----NSQQTNNQPEEK-PLQLLQPPPNMTIEEWVIETRRKRDEILDKKQIRKQRK 419
Query: 442 QDLAKRRTAAAQERMRLISELARKEKRDDDFGMRDEDWDVYKVINKDAGDTDSXXXXXXX 501
QDLAKRRTAAAQERMR+IS LA+KEK DDFGMRDEDWDVYK I+++ GD+DS
Sbjct: 420 QDLAKRRTAAAQERMRIISHLAKKEKGVDDFGMRDEDWDVYKSISRE-GDSDSDAENEKL 478
Query: 502 XXXXXXXXXHDPEFTSLNQEQELSP---KEANQLHIGVERMCGPECLFQPSMLGSIQAGI 558
HD F E ++P E +QLHIGVER+ PE LFQPSM+G +AG+
Sbjct: 479 IECEEILKQHDSTFV----EPVVAPGNIAEFHQLHIGVERIRVPEILFQPSMIGVQEAGL 534
Query: 559 SETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVSLAEN 618
+ T+++VL +P+ L N+ +TG + GF ERL+++L PFQS +++ +A +
Sbjct: 535 TGTIDYVLKLFPKEDQVKLVGNVMLTGGCANIRGFKERLSRELQAILPFQSVYNLMVAGS 594
Query: 619 PELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRVHPCSNKFEPYPLVIS 671
P LDAW GA QF+ S+ F +T+ Y E GGE+F+ H SN + P P +S
Sbjct: 595 PSLDAWRGASQFANSQEFKQSLITRQLYDECGGEYFKEHTASNFYYPTPSQVS 647
|
|
| FB|FBgn0038576 Arp5 "Actin-related protein 5" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q293V2 Arp5 "Actin-related protein 5" [Drosophila pseudoobscura pseudoobscura (taxid:46245)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5ZJA4 ACTR5 "Actin-related protein 5" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1924748 Actr5 "ARP5 actin-related protein 5" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3N1W1 ACTR5 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SDX1 ACTR5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| RGD|1307958 Actr5 "ARP5 actin-related protein 5 homolog (yeast)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PSS0 ACTR5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9H9F9 ACTR5 "Actin-related protein 5" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9Y7X8 | ARP5_SCHPO | No assigned EC number | 0.2979 | 0.8958 | 0.8585 | yes | N/A |
| P53946 | ARP5_YEAST | No assigned EC number | 0.2804 | 0.8769 | 0.8026 | yes | N/A |
| Q940Z2 | ARP5_ARATH | No assigned EC number | 0.3074 | 0.8769 | 0.8370 | yes | N/A |
| Q9VEC3 | ARP5_DROME | No assigned EC number | 0.4006 | 0.8885 | 0.9475 | yes | N/A |
| Q293V2 | ARP5_DROPS | No assigned EC number | 0.4092 | 0.8871 | 0.9416 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 691 | |||
| COG5277 | 444 | COG5277, COG5277, Actin and related proteins [Cyto | 1e-32 | |
| smart00268 | 373 | smart00268, ACTIN, Actin | 1e-30 | |
| pfam00022 | 367 | pfam00022, Actin, Actin | 2e-22 | |
| PTZ00004 | 378 | PTZ00004, PTZ00004, actin-2; Provisional | 2e-20 | |
| smart00268 | 373 | smart00268, ACTIN, Actin | 3e-18 | |
| PTZ00466 | 380 | PTZ00466, PTZ00466, actin-like protein; Provisiona | 3e-18 | |
| pfam00022 | 367 | pfam00022, Actin, Actin | 2e-17 | |
| PTZ00281 | 376 | PTZ00281, PTZ00281, actin; Provisional | 3e-17 | |
| COG5277 | 444 | COG5277, COG5277, Actin and related proteins [Cyto | 1e-14 | |
| PTZ00280 | 414 | PTZ00280, PTZ00280, Actin-related protein 3; Provi | 1e-11 | |
| PTZ00452 | 375 | PTZ00452, PTZ00452, actin; Provisional | 1e-10 | |
| PTZ00281 | 376 | PTZ00281, PTZ00281, actin; Provisional | 7e-10 | |
| PTZ00004 | 378 | PTZ00004, PTZ00004, actin-2; Provisional | 8e-10 | |
| PTZ00466 | 380 | PTZ00466, PTZ00466, actin-like protein; Provisiona | 2e-05 | |
| PTZ00452 | 375 | PTZ00452, PTZ00452, actin; Provisional | 3e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 5e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 5e-04 | |
| PTZ00280 | 414 | PTZ00280, PTZ00280, Actin-related protein 3; Provi | 7e-04 | |
| cd00012 | 185 | cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide- | 9e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.002 |
| >gnl|CDD|227602 COG5277, COG5277, Actin and related proteins [Cytoskeleton] | Back alignment and domain information |
|---|
Score = 131 bits (330), Expect = 1e-32
Identities = 103/433 (23%), Positives = 169/433 (39%), Gaps = 71/433 (16%)
Query: 29 PIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQ----VGNDISNIEAV- 83
IV DNG+ + G+A + P +F +++ + R E + + VGN+ N
Sbjct: 8 TIVIDNGSGTTKAGFAGNDTPTTVFPSIVGRRRDEDSVMEDTEEKDTYVGNEAQNDRDNS 67
Query: 84 RFQLKTQFDKNVVTHYDIQEQIFDYAFS---HLSINTEGNVNHPIVLTEPFLNPNYSRSL 140
+L+ + ++ ++D EQI+DY F L + E HP++LTEP LNP +R
Sbjct: 68 LLELRYPIENGIILNWDAMEQIWDYTFFNKGDLLPSPEE---HPLLLTEPPLNPPSNREK 124
Query: 141 MSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCG 200
++ELLFE VP++ I ++ S Y +G++I G
Sbjct: 125 ITELLFETLNVPALYLAIQAVLS-LYASGSSDE-------------------TGLVIDSG 164
Query: 201 YQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINS------------I 248
THVIPV++G + KRID+GG + +L KLL+ KYP I
Sbjct: 165 DSVTHVIPVVDGIVLPKAVKRIDIGGRDITDYLKKLLREKYPPSRGYNLKSELVEYSSEI 224
Query: 249 TPSRSEELL---WDYGFVATDYREHLRKWLDAEFYDSNVVKVQL-PYAVPVPNLTTEQQK 304
EE+ + +V+ D E + + S QL ++
Sbjct: 225 VNEIKEEVCETDDESAYVSLDAEEEFEEEEEKPAEKSTESTFQLSKETSIAKE---SKEL 281
Query: 305 DRRKELAKKLVEMNAKKREERLVDDERHLNELLELREIVELTPSDHSHAREAFKSMGINN 364
+E+ + K E L E ++ L E +I E + E + N+
Sbjct: 282 PDGEEI--EFGNEERFKAPEILFKPELPISGLEEAGKIDESKQELVAENYEISPTNLGND 339
Query: 365 IQDLNKSINQ-LQQKIEKTKAKIIAYNN-----GEDLTEEPKAKLSKEI----------- 407
I L + + Q +Q E + Y+N G +L KE+
Sbjct: 340 IAGLPELVYQSIQICDEDVRKS--LYSNIVLTGGTSKIPGFAERLQKELTSLAPSIWKVS 397
Query: 408 AVPESEAEFKAWL 420
+P + AWL
Sbjct: 398 VIPPPDPSLDAWL 410
|
Length = 444 |
| >gnl|CDD|214592 smart00268, ACTIN, Actin | Back alignment and domain information |
|---|
| >gnl|CDD|200935 pfam00022, Actin, Actin | Back alignment and domain information |
|---|
| >gnl|CDD|240225 PTZ00004, PTZ00004, actin-2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|214592 smart00268, ACTIN, Actin | Back alignment and domain information |
|---|
| >gnl|CDD|240426 PTZ00466, PTZ00466, actin-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|200935 pfam00022, Actin, Actin | Back alignment and domain information |
|---|
| >gnl|CDD|173506 PTZ00281, PTZ00281, actin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227602 COG5277, COG5277, Actin and related proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|240343 PTZ00280, PTZ00280, Actin-related protein 3; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185631 PTZ00452, PTZ00452, actin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173506 PTZ00281, PTZ00281, actin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240225 PTZ00004, PTZ00004, actin-2; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240426 PTZ00466, PTZ00466, actin-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185631 PTZ00452, PTZ00452, actin; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|240343 PTZ00280, PTZ00280, Actin-related protein 3; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 691 | |||
| KOG0681|consensus | 645 | 100.0 | ||
| PTZ00452 | 375 | actin; Provisional | 100.0 | |
| PTZ00466 | 380 | actin-like protein; Provisional | 100.0 | |
| KOG0676|consensus | 372 | 100.0 | ||
| PTZ00281 | 376 | actin; Provisional | 100.0 | |
| PTZ00004 | 378 | actin-2; Provisional | 100.0 | |
| PTZ00280 | 414 | Actin-related protein 3; Provisional | 100.0 | |
| KOG0680|consensus | 400 | 100.0 | ||
| KOG0677|consensus | 389 | 100.0 | ||
| PF00022 | 393 | Actin: Actin; InterPro: IPR004000 Actin [, ] is a | 100.0 | |
| KOG0679|consensus | 426 | 100.0 | ||
| smart00268 | 373 | ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki | 100.0 | |
| cd00012 | 371 | ACTIN Actin; An ubiquitous protein involved in the | 100.0 | |
| COG5277 | 444 | Actin and related proteins [Cytoskeleton] | 100.0 | |
| KOG0678|consensus | 415 | 100.0 | ||
| PRK13930 | 335 | rod shape-determining protein MreB; Provisional | 100.0 | |
| PRK13927 | 334 | rod shape-determining protein MreB; Provisional | 100.0 | |
| KOG0797|consensus | 618 | 100.0 | ||
| TIGR00904 | 333 | mreB cell shape determining protein, MreB/Mrl fami | 99.98 | |
| PRK13929 | 335 | rod-share determining protein MreBH; Provisional | 99.98 | |
| PF06723 | 326 | MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba | 99.96 | |
| PRK13928 | 336 | rod shape-determining protein Mbl; Provisional | 99.95 | |
| COG1077 | 342 | MreB Actin-like ATPase involved in cell morphogene | 99.91 | |
| TIGR02529 | 239 | EutJ ethanolamine utilization protein EutJ family | 99.58 | |
| PRK15080 | 267 | ethanolamine utilization protein EutJ; Provisional | 99.52 | |
| CHL00094 | 621 | dnaK heat shock protein 70 | 99.22 | |
| TIGR01991 | 599 | HscA Fe-S protein assembly chaperone HscA. The Hea | 99.19 | |
| PTZ00400 | 663 | DnaK-type molecular chaperone; Provisional | 99.18 | |
| TIGR02350 | 595 | prok_dnaK chaperone protein DnaK. Members of this | 99.17 | |
| PRK01433 | 595 | hscA chaperone protein HscA; Provisional | 99.17 | |
| PRK05183 | 616 | hscA chaperone protein HscA; Provisional | 99.12 | |
| PLN03184 | 673 | chloroplast Hsp70; Provisional | 99.12 | |
| PTZ00186 | 657 | heat shock 70 kDa precursor protein; Provisional | 99.12 | |
| PRK00290 | 627 | dnaK molecular chaperone DnaK; Provisional | 99.11 | |
| PRK13411 | 653 | molecular chaperone DnaK; Provisional | 99.1 | |
| PTZ00009 | 653 | heat shock 70 kDa protein; Provisional | 99.08 | |
| PRK13410 | 668 | molecular chaperone DnaK; Provisional | 99.08 | |
| PRK11678 | 450 | putative chaperone; Provisional | 99.02 | |
| TIGR01174 | 371 | ftsA cell division protein FtsA. This bacterial ce | 99.01 | |
| PF00012 | 602 | HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho | 98.82 | |
| COG0849 | 418 | ftsA Cell division ATPase FtsA [Cell division and | 98.73 | |
| PRK09472 | 420 | ftsA cell division protein FtsA; Reviewed | 98.69 | |
| TIGR01175 | 348 | pilM type IV pilus assembly protein PilM. This pro | 98.38 | |
| PF11104 | 340 | PilM_2: Type IV pilus assembly protein PilM;; PDB: | 98.04 | |
| COG0443 | 579 | DnaK Molecular chaperone [Posttranslational modifi | 97.97 | |
| TIGR03739 | 320 | PRTRC_D PRTRC system protein D. A novel genetic sy | 97.62 | |
| PRK10719 | 475 | eutA reactivating factor for ethanolamine ammonia | 97.48 | |
| PRK13917 | 344 | plasmid segregation protein ParM; Provisional | 97.38 | |
| PF06277 | 473 | EutA: Ethanolamine utilisation protein EutA; Inter | 96.78 | |
| PF06406 | 318 | StbA: StbA protein; InterPro: IPR009440 This entry | 96.69 | |
| KOG0100|consensus | 663 | 96.58 | ||
| COG4972 | 354 | PilM Tfp pilus assembly protein, ATPase PilM [Cell | 96.23 | |
| KOG0104|consensus | 902 | 95.24 | ||
| KOG0101|consensus | 620 | 94.9 | ||
| COG4820 | 277 | EutJ Ethanolamine utilization protein, possible ch | 94.42 | |
| PRK10854 | 513 | exopolyphosphatase; Provisional | 93.22 | |
| TIGR03706 | 300 | exo_poly_only exopolyphosphatase. It appears that | 93.17 | |
| PRK11031 | 496 | guanosine pentaphosphate phosphohydrolase; Provisi | 92.87 | |
| COG4819 | 473 | EutA Ethanolamine utilization protein, possible ch | 92.6 | |
| COG0248 | 492 | GppA Exopolyphosphatase [Nucleotide transport and | 92.13 | |
| KOG0103|consensus | 727 | 87.46 | ||
| TIGR03286 | 404 | methan_mark_15 putative methanogenesis marker prot | 85.21 | |
| PF02541 | 285 | Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I | 84.98 | |
| TIGR00241 | 248 | CoA_E_activ CoA-substrate-specific enzyme activase | 83.87 | |
| PRK13317 | 277 | pantothenate kinase; Provisional | 83.3 | |
| TIGR02261 | 262 | benz_CoA_red_D benzoyl-CoA reductase, bcr type, su | 82.67 | |
| TIGR02259 | 432 | benz_CoA_red_A benzoyl-CoA reductase, bcr type, su | 82.41 | |
| PF08841 | 332 | DDR: Diol dehydratase reactivase ATPase-like domai | 82.31 | |
| TIGR03123 | 318 | one_C_unchar_1 probable H4MPT-linked C1 transfer p | 82.11 | |
| PF14450 | 120 | FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B | 80.15 |
| >KOG0681|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-102 Score=831.40 Aligned_cols=616 Identities=39% Similarity=0.666 Sum_probs=508.9
Q ss_pred ceecccCCCCCCCcc--ccccccCCCCceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCCCCcCCcceeccccccc
Q psy7893 3 MKVLKDTKILPDPYY--EYLDELRDSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKERGKKDGETQVGNDISNI 80 (691)
Q Consensus 3 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~~~~~~~~~vG~ea~~~ 80 (691)
+..++|+-.-|+|.. +|. ...||||||||+.|||||+|+..|+++|+|++.++++++... ...+||++....
T Consensus 2 ~~~~r~p~a~p~p~~~q~~~-----n~~piVIDNGS~~~RaGw~ge~eP~lvFrNvl~r~Rdrk~~~-s~t~vgnd~~~~ 75 (645)
T KOG0681|consen 2 YLELRDPRAFPDPNREQSYS-----NTIPIVIDNGSYECRAGWAGEKEPRLVFRNVLTRPRDRKLGA-SVTLVGNDILNF 75 (645)
T ss_pred eeeccCccccCCchhhhccc-----CCCcEEEeCCceeEeecccCCCCccchhhhhhcccccccccc-ccccccchhhhh
Confidence 456677733478773 333 166999999999999999999999999999999999765221 123899998887
Q ss_pred cccccEEecccccCcccCHHHHHHHHHHHHhhcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEeechhh
Q psy7893 81 EAVRFQLKTQFDKNVVTHYDIQEQIFDYAFSHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCYGIDS 160 (691)
Q Consensus 81 ~~~~~~l~~Pi~~G~I~nwd~~e~iw~~~f~~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~~~~a 160 (691)
.+.+...++||++.+|+||+.+|.|+||+|.+||+++++ .+|||++||+.+||...|..|+|+|||+||||+|.++.++
T Consensus 76 ~~~Rs~~rSPFd~nVvtNwel~E~ilDY~F~~LG~~~~~-idhPIilTE~laNP~~~R~~m~elLFE~YgvP~V~yGIDs 154 (645)
T KOG0681|consen 76 QGVRSSPRSPFDRNVVTNWELMEQILDYIFGKLGVDGQG-IDHPIILTEALANPVYSRSEMVELLFETYGVPKVAYGIDS 154 (645)
T ss_pred hhhhccCCCCCcCCccccHHHHHHHHHHHHHhcCCCccC-CCCCeeeehhccChHHHHHHHHHHHHHHcCCcceeechhh
Confidence 776678899999999999999999999999999999875 6999999999999999999999999999999999999999
Q ss_pred HHhhhhccCCCCCCccccccccccccCCCCCceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHHHHhhh
Q psy7893 161 LFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLK 240 (691)
Q Consensus 161 lla~ya~~~~~~~G~~~~~~~~~~~~~~~~~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~lL~~~ 240 (691)
++|+|.+- +. ....+|+||++|++.|||+||.+|..+...++|+++||.+.+.||.+|++.+
T Consensus 155 lfS~~hN~-----~~-------------~~~~~~liis~g~~~T~vipvldG~~il~~~kRiN~GG~qa~dYL~~Lmq~K 216 (645)
T KOG0681|consen 155 LFSFYHNY-----GK-------------SSNKSGLIISMGHSATHVIPVLDGRLILKDVKRINWGGYQAGDYLSRLMQLK 216 (645)
T ss_pred HHHHhhcc-----Cc-------------ccCcceEEEecCCCcceeEEEecCchhhhcceeeccCcchHHHHHHHHHhcc
Confidence 99999761 21 1125899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHheeeeccHHHHHHhhhhcccccccccccccCcc-CCCCCCchHHHHHHHHHHHHHHHHHHH
Q psy7893 241 YPSHINSITPSRSEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYA-VPVPNLTTEQQKDRRKELAKKLVEMNA 319 (691)
Q Consensus 241 ~~~~~~~~~~~~~e~IKe~~cyva~dy~~el~~~~~~~~~~~~~~~~qlp~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~ 319 (691)
||.|++.++...++.+++.+||||.||.+|+..|..++.++.++.++|+||+ +..+. .....|++|++ +|++++++
T Consensus 217 yp~~~~~~t~sk~E~l~~eHcyis~DY~eei~~~l~~d~~d~~~~~~qlP~~evl~~~-e~~l~Ae~kqe--kRlq~~a~ 293 (645)
T KOG0681|consen 217 YPFHLNAFTGSKAERLLHEHCYISPDYREEIIKILEMDYYDENRNYFQLPYTEVLAEV-ELALTAEKKQE--KRLQEQAA 293 (645)
T ss_pred CccchhhcCHHHHHHHhhhhceeCcchHHHHHHHhhhhhhhccceEEecccccccchh-hhhccHHHHHH--HHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 55553 12235555555 78888888
Q ss_pred HHHHhhhhhh------HHHHHHHHHHHHHHhcCCCChhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHhhcCCCC
Q psy7893 320 KKREERLVDD------ERHLNELLELREIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGE 393 (691)
Q Consensus 320 ~kr~~~~~~~------e~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~i~~~~~~~~k~~~k~~~~~~~~ 393 (691)
-||.+|+.+. |++|...-.++. +.. +..++.+++.-..+..+.... .-.+|.+++++..+.+.
T Consensus 294 lkrv~k~~~re~~redeqql~~~~kaq~--e~e--~~~D~~q~~~ll~v~~eL~~d-------~lk~k~~qr~lkas~da 362 (645)
T KOG0681|consen 294 LKRVEKINARENRREDEQQLESYNKAQG--EQE--SNLDLEQKFPLLNVPAELDED-------QLKEKKKQRILKASTDA 362 (645)
T ss_pred HhhHHHHHHHHhhhhhHHHHHHHHHhhh--chh--cCccHhhhchhhcchhhhCHH-------HHHHHHHHHHHHhhhhh
Confidence 8888888776 444444322221 111 122244444444443111111 11234455555555443
Q ss_pred CCCchh-h--hhhhhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhh-----
Q psy7893 394 DLTEEP-K--AKLSKEIAVPESEAEFKAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARK----- 465 (691)
Q Consensus 394 ~l~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~k~~~r~~~~~~~~~~~s~~~q~r~~~~~~l~~~----- 465 (691)
++-+.. | |++.| +-. .++.++.+|++++|.+++.++++++++++.|+++++|+|+++|.|||.++.+|.+
T Consensus 363 r~rar~eke~Er~~k-~~~-~r~~~~~swl~e~r~k~~~ller~~~kk~lk~e~~~r~s~~Sq~rmr~~~~La~~~~~rr 440 (645)
T KOG0681|consen 363 RLRARVEKELERLNK-LEE-EREENLISWLEELREKLEKLLERISQKKRLKQELKDRKSHASQLRMRALARLAYEQVVRR 440 (645)
T ss_pred hccccccchHHHhhc-ccc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhhHHHHhhhHHHHHHH
Confidence 332211 1 22111 111 1237899999999999999999999999999999999999999999999999887
Q ss_pred ---ccCCCCCCCCCcchhhhhhhccCCCCCChHHHHHHHHHHHHHHhhCCCCcccccc---cc-----ccCCCCCcEEEe
Q psy7893 466 ---EKRDDDFGMRDEDWDVYKVINKDAGDTDSEEEQERLIELEEILRQHDPEFTSLNQ---EQ-----ELSPKEANQLHI 534 (691)
Q Consensus 466 ---~~~~d~~~~~d~dw~~y~~~~~~~~~~~~~~~~~~l~~~~~~l~~~dp~~~~~~~---~~-----~~~~~~~~~i~l 534 (691)
...+|.||+.|+||++|..+. +..+.+.+.+..+++.|.+|||.|+...+ +. +.-+.+.+++++
T Consensus 441 k~~~~t~D~fg~~Dedw~vYe~le-----e~~~~~~~dl~~l~~~L~e~Dp~F~~~~~~~~d~~~~~~p~~~~e~~qlh~ 515 (645)
T KOG0681|consen 441 KRKEATPDNFGARDEDWDVYEDLE-----EENKSILEDLKSLNHELLEFDPHFTQYVEGTTDPRNGVLPGFTAEDYQLHL 515 (645)
T ss_pred hcccCCccccccchhhHHHHHHhh-----hhhhhHHHHHHHHHHHHHhhCcccccccccccCcccCcchhHHHhhhhhhh
Confidence 234788999999999995542 23344567899999999999999999442 11 112477899999
Q ss_pred cceeeeecccccCCCCCCCcccChHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcCCCCceeEEE
Q psy7893 535 GVERMCGPECLFQPSMLGSIQAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENRPFQSHFSVS 614 (691)
Q Consensus 535 ~~Er~~~pE~LF~Ps~ig~~~~Gl~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~p~~~~i~V~ 614 (691)
|+||++||||+|+|++||.||+||.|++..+|.++|.+.+..|.+||+||||+|++||+++||.+||+.++|.+++|.|+
T Consensus 516 nVEriRvPEIiFqPsiiG~dQaGl~Ei~~~il~r~p~~eq~~lV~nVllTGG~s~~pGmkeRi~kElt~mrP~gS~i~V~ 595 (645)
T KOG0681|consen 516 NVERIRVPEIIFQPSIIGIDQAGLAEIMDTILRRYPHDEQEKLVSNVLLTGGCSQLPGMKERIKKELTSMRPVGSSINVV 595 (645)
T ss_pred cceeeccceeeeccccccchhhhHHHHHHHHHHhCchhhhHhhhhheEeecccccCcCHHHHHHHHhheecccCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCccceeehhhhhcCccccccccccHHHHhhhchhhHhhcCCCCCCc
Q psy7893 615 LAENPELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRVHPCSNKFE 664 (691)
Q Consensus 615 ~~~dp~~~aW~Gasilas~~~f~~~~itk~eYeE~G~~~~~~k~~~n~~~ 664 (691)
.+.||.++||+||+.||...+|...|+||+||+|+|++|+++|++||++|
T Consensus 596 rasdP~LDAW~GA~~~a~n~~f~~~~~Tr~dy~E~G~e~~kEh~~~n~~~ 645 (645)
T KOG0681|consen 596 RASDPVLDAWRGASAWAANPTFTLTQITRKDYEEKGEEYLKEHVASNIYY 645 (645)
T ss_pred ecCCcchhhhhhhHHhhcCcccchhhhhHHhhhhhhHHHHHHHhhccccC
Confidence 99999999999999999999999999999999999999999999999986
|
|
| >PTZ00452 actin; Provisional | Back alignment and domain information |
|---|
| >PTZ00466 actin-like protein; Provisional | Back alignment and domain information |
|---|
| >KOG0676|consensus | Back alignment and domain information |
|---|
| >PTZ00281 actin; Provisional | Back alignment and domain information |
|---|
| >PTZ00004 actin-2; Provisional | Back alignment and domain information |
|---|
| >PTZ00280 Actin-related protein 3; Provisional | Back alignment and domain information |
|---|
| >KOG0680|consensus | Back alignment and domain information |
|---|
| >KOG0677|consensus | Back alignment and domain information |
|---|
| >PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton | Back alignment and domain information |
|---|
| >KOG0679|consensus | Back alignment and domain information |
|---|
| >smart00268 ACTIN Actin | Back alignment and domain information |
|---|
| >cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton | Back alignment and domain information |
|---|
| >COG5277 Actin and related proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0678|consensus | Back alignment and domain information |
|---|
| >PRK13930 rod shape-determining protein MreB; Provisional | Back alignment and domain information |
|---|
| >PRK13927 rod shape-determining protein MreB; Provisional | Back alignment and domain information |
|---|
| >KOG0797|consensus | Back alignment and domain information |
|---|
| >TIGR00904 mreB cell shape determining protein, MreB/Mrl family | Back alignment and domain information |
|---|
| >PRK13929 rod-share determining protein MreBH; Provisional | Back alignment and domain information |
|---|
| >PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes | Back alignment and domain information |
|---|
| >PRK13928 rod shape-determining protein Mbl; Provisional | Back alignment and domain information |
|---|
| >COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02529 EutJ ethanolamine utilization protein EutJ family protein | Back alignment and domain information |
|---|
| >PRK15080 ethanolamine utilization protein EutJ; Provisional | Back alignment and domain information |
|---|
| >CHL00094 dnaK heat shock protein 70 | Back alignment and domain information |
|---|
| >TIGR01991 HscA Fe-S protein assembly chaperone HscA | Back alignment and domain information |
|---|
| >PTZ00400 DnaK-type molecular chaperone; Provisional | Back alignment and domain information |
|---|
| >TIGR02350 prok_dnaK chaperone protein DnaK | Back alignment and domain information |
|---|
| >PRK01433 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >PRK05183 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >PLN03184 chloroplast Hsp70; Provisional | Back alignment and domain information |
|---|
| >PTZ00186 heat shock 70 kDa precursor protein; Provisional | Back alignment and domain information |
|---|
| >PRK00290 dnaK molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >PRK13411 molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >PTZ00009 heat shock 70 kDa protein; Provisional | Back alignment and domain information |
|---|
| >PRK13410 molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >PRK11678 putative chaperone; Provisional | Back alignment and domain information |
|---|
| >TIGR01174 ftsA cell division protein FtsA | Back alignment and domain information |
|---|
| >PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins | Back alignment and domain information |
|---|
| >COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK09472 ftsA cell division protein FtsA; Reviewed | Back alignment and domain information |
|---|
| >TIGR01175 pilM type IV pilus assembly protein PilM | Back alignment and domain information |
|---|
| >PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A | Back alignment and domain information |
|---|
| >COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR03739 PRTRC_D PRTRC system protein D | Back alignment and domain information |
|---|
| >PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional | Back alignment and domain information |
|---|
| >PRK13917 plasmid segregation protein ParM; Provisional | Back alignment and domain information |
|---|
| >PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon | Back alignment and domain information |
|---|
| >PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] | Back alignment and domain information |
|---|
| >KOG0100|consensus | Back alignment and domain information |
|---|
| >COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0104|consensus | Back alignment and domain information |
|---|
| >KOG0101|consensus | Back alignment and domain information |
|---|
| >COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10854 exopolyphosphatase; Provisional | Back alignment and domain information |
|---|
| >TIGR03706 exo_poly_only exopolyphosphatase | Back alignment and domain information |
|---|
| >PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional | Back alignment and domain information |
|---|
| >COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0103|consensus | Back alignment and domain information |
|---|
| >TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 | Back alignment and domain information |
|---|
| >PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3 | Back alignment and domain information |
|---|
| >TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative | Back alignment and domain information |
|---|
| >PRK13317 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D | Back alignment and domain information |
|---|
| >TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A | Back alignment and domain information |
|---|
| >PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ] | Back alignment and domain information |
|---|
| >TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein | Back alignment and domain information |
|---|
| >PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 691 | ||||
| 3a5m_C | 375 | Crystal Structure Of A Dictyostelium P109i Mg2+-Act | 1e-18 | ||
| 3a5m_C | 375 | Crystal Structure Of A Dictyostelium P109i Mg2+-Act | 4e-10 | ||
| 3b63_C | 365 | Actin Filament Model In The Extended Form Of Acroms | 2e-18 | ||
| 3b63_C | 365 | Actin Filament Model In The Extended Form Of Acroms | 4e-09 | ||
| 3a5l_C | 375 | Crystal Structure Of A Dictyostelium P109a Mg2+-Act | 2e-18 | ||
| 3a5l_C | 375 | Crystal Structure Of A Dictyostelium P109a Mg2+-Act | 4e-10 | ||
| 1yag_A | 375 | Structure Of The Yeast Actin-human Gelsolin Segment | 2e-18 | ||
| 1yag_A | 375 | Structure Of The Yeast Actin-human Gelsolin Segment | 3e-09 | ||
| 1d4x_A | 375 | Crystal Structure Of Caenorhabditis Elegans Mg-Atp | 2e-18 | ||
| 1d4x_A | 375 | Crystal Structure Of Caenorhabditis Elegans Mg-Atp | 5e-08 | ||
| 2oan_A | 375 | Structure Of Oxidized Beta-Actin Length = 375 | 3e-18 | ||
| 2oan_A | 375 | Structure Of Oxidized Beta-Actin Length = 375 | 5e-08 | ||
| 3b63_A | 365 | Actin Filament Model In The Extended Form Of Acroms | 3e-18 | ||
| 3b63_A | 365 | Actin Filament Model In The Extended Form Of Acroms | 4e-09 | ||
| 3u4l_A | 375 | Cryocooled Bovine Profilin:actin Crystal Structure | 4e-18 | ||
| 3u4l_A | 375 | Cryocooled Bovine Profilin:actin Crystal Structure | 5e-08 | ||
| 4efh_A | 375 | Acanthamoeba Actin Complex With Spir Domain D Lengt | 4e-18 | ||
| 4efh_A | 375 | Acanthamoeba Actin Complex With Spir Domain D Lengt | 1e-09 | ||
| 2btf_A | 375 | The Structure Of Crystalline Profilin-Beta-Actin Le | 4e-18 | ||
| 2btf_A | 375 | The Structure Of Crystalline Profilin-Beta-Actin Le | 5e-08 | ||
| 3byh_A | 374 | Model Of Actin-Fimbrin Abd2 Complex Length = 374 | 4e-18 | ||
| 3byh_A | 374 | Model Of Actin-Fimbrin Abd2 Complex Length = 374 | 4e-08 | ||
| 1yvn_A | 375 | The Yeast Actin Val 159 Asn Mutant Complex With Hum | 4e-18 | ||
| 1yvn_A | 375 | The Yeast Actin Val 159 Asn Mutant Complex With Hum | 4e-09 | ||
| 3b63_L | 365 | Actin Filament Model In The Extended Form Of Acroms | 5e-18 | ||
| 3b63_L | 365 | Actin Filament Model In The Extended Form Of Acroms | 6e-08 | ||
| 1dej_A | 375 | Crystal Structure Of A DictyosteliumTETRAHYMENA CHI | 5e-18 | ||
| 1dej_A | 375 | Crystal Structure Of A DictyosteliumTETRAHYMENA CHI | 2e-10 | ||
| 1c0g_A | 375 | Crystal Structure Of 1:1 Complex Between Gelsolin S | 6e-18 | ||
| 1c0g_A | 375 | Crystal Structure Of 1:1 Complex Between Gelsolin S | 4e-10 | ||
| 3w3d_A | 374 | Crystal Structure Of Smooth Muscle G Actin Dnase I | 9e-18 | ||
| 3w3d_A | 374 | Crystal Structure Of Smooth Muscle G Actin Dnase I | 8e-08 | ||
| 3ci5_A | 375 | Complex Of Phosphorylated Dictyostelium Discoideum | 9e-18 | ||
| 3ci5_A | 375 | Complex Of Phosphorylated Dictyostelium Discoideum | 4e-10 | ||
| 1nlv_A | 375 | Crystal Structure Of Dictyostelium Discoideum Actin | 1e-17 | ||
| 1nlv_A | 375 | Crystal Structure Of Dictyostelium Discoideum Actin | 4e-10 | ||
| 2hf3_A | 374 | Crystal Structure Of Monomeric Actin In The Adp Bou | 1e-17 | ||
| 2hf3_A | 374 | Crystal Structure Of Monomeric Actin In The Adp Bou | 1e-08 | ||
| 3chw_A | 375 | Complex Of Dictyostelium Discoideum Actin With Prof | 1e-17 | ||
| 3chw_A | 375 | Complex Of Dictyostelium Discoideum Actin With Prof | 4e-10 | ||
| 3eks_A | 375 | Crystal Structure Of Monomeric Actin Bound To Cytoc | 1e-17 | ||
| 3eks_A | 375 | Crystal Structure Of Monomeric Actin Bound To Cytoc | 1e-08 | ||
| 1c0f_A | 368 | Crystal Structure Of Dictyostelium Caatp-Actin In C | 2e-17 | ||
| 1c0f_A | 368 | Crystal Structure Of Dictyostelium Caatp-Actin In C | 4e-10 | ||
| 1atn_A | 373 | Atomic Structure Of The Actin:dnase I Complex Lengt | 3e-17 | ||
| 1atn_A | 373 | Atomic Structure Of The Actin:dnase I Complex Lengt | 3e-08 | ||
| 2w49_D | 372 | Isometrically Contracting Insect Asynchronous Fligh | 3e-17 | ||
| 2w49_D | 372 | Isometrically Contracting Insect Asynchronous Fligh | 3e-08 | ||
| 3m6g_A | 371 | Crystal Structure Of Actin In Complex With Lobophor | 3e-17 | ||
| 3m6g_A | 371 | Crystal Structure Of Actin In Complex With Lobophor | 3e-08 | ||
| 3g37_O | 376 | Cryo-Em Structure Of Actin Filament In The Presence | 4e-17 | ||
| 3g37_O | 376 | Cryo-Em Structure Of Actin Filament In The Presence | 3e-08 | ||
| 1qz5_A | 375 | Structure Of Rabbit Actin In Complex With Kabiramid | 4e-17 | ||
| 1qz5_A | 375 | Structure Of Rabbit Actin In Complex With Kabiramid | 3e-08 | ||
| 1kxp_A | 375 | Crystal Structure Of Human Vitamin D-binding Protei | 4e-17 | ||
| 1kxp_A | 375 | Crystal Structure Of Human Vitamin D-binding Protei | 3e-08 | ||
| 1eqy_A | 377 | Complex Between Rabbit Muscle Alpha-Actin: Human Ge | 4e-17 | ||
| 1eqy_A | 377 | Complex Between Rabbit Muscle Alpha-Actin: Human Ge | 3e-08 | ||
| 4b1v_A | 376 | Structure Of The Phactr1 Rpel-N Domain Bound To G-A | 6e-17 | ||
| 4b1v_A | 376 | Structure Of The Phactr1 Rpel-N Domain Bound To G-A | 3e-08 | ||
| 1ijj_A | 377 | The X-Ray Crystal Structure Of The Complex Between | 6e-17 | ||
| 1ijj_A | 377 | The X-Ray Crystal Structure Of The Complex Between | 3e-08 | ||
| 3b63_E | 365 | Actin Filament Model In The Extended Form Of Acroms | 2e-16 | ||
| 3b63_E | 365 | Actin Filament Model In The Extended Form Of Acroms | 3e-08 | ||
| 2gwj_A | 371 | Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form | 2e-16 | ||
| 2gwj_A | 371 | Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form | 3e-08 | ||
| 1t44_A | 370 | Structural Basis Of Actin Sequestration By Thymosin | 2e-16 | ||
| 1t44_A | 370 | Structural Basis Of Actin Sequestration By Thymosin | 3e-08 | ||
| 1lcu_A | 371 | Polylysine Induces An Antiparallel Actin Dimer That | 4e-16 | ||
| 1lcu_A | 371 | Polylysine Induces An Antiparallel Actin Dimer That | 3e-08 | ||
| 2p9k_B | 394 | Crystal Structure Of Bovine Arp23 COMPLEX CO-Crysta | 6e-16 | ||
| 2p9k_B | 394 | Crystal Structure Of Bovine Arp23 COMPLEX CO-Crysta | 2e-04 | ||
| 1k8k_B | 394 | Crystal Structure Of Arp23 COMPLEX Length = 394 | 1e-15 | ||
| 1k8k_B | 394 | Crystal Structure Of Arp23 COMPLEX Length = 394 | 2e-04 | ||
| 3b63_D | 357 | Actin Filament Model In The Extended Form Of Acroms | 2e-15 | ||
| 3b63_D | 357 | Actin Filament Model In The Extended Form Of Acroms | 1e-07 | ||
| 3b63_B | 364 | Actin Filament Model In The Extended Form Of Acroms | 3e-15 | ||
| 3b63_B | 364 | Actin Filament Model In The Extended Form Of Acroms | 3e-08 | ||
| 3b63_F | 357 | Actin Filament Model In The Extended Form Of Acroms | 3e-15 | ||
| 3b63_F | 357 | Actin Filament Model In The Extended Form Of Acroms | 4e-07 | ||
| 3mn5_A | 359 | Structures Of Actin-Bound Wh2 Domains Of Spire And | 3e-14 | ||
| 3mn5_A | 359 | Structures Of Actin-Bound Wh2 Domains Of Spire And | 3e-08 | ||
| 3dwl_A | 427 | Crystal Structure Of Fission Yeast Arp2/3 Complex L | 9e-10 | ||
| 3dwl_A | 427 | Crystal Structure Of Fission Yeast Arp2/3 Complex L | 4e-05 | ||
| 1k8k_A | 418 | Crystal Structure Of Arp23 COMPLEX Length = 418 | 2e-09 | ||
| 1k8k_A | 418 | Crystal Structure Of Arp23 COMPLEX Length = 418 | 2e-05 | ||
| 3qb0_A | 498 | Crystal Structure Of Actin-Related Protein Arp4 Fro | 7e-05 |
| >pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
|
| >pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 375 | Back alignment and structure |
| >pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 375 | Back alignment and structure |
| >pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 375 | Back alignment and structure |
| >pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 375 | Back alignment and structure |
| >pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin Length = 375 | Back alignment and structure |
| >pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin Length = 375 | Back alignment and structure |
| >pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4 A Length = 375 | Back alignment and structure |
| >pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4 A Length = 375 | Back alignment and structure |
| >pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D Length = 375 | Back alignment and structure |
| >pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D Length = 375 | Back alignment and structure |
| >pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin Length = 375 | Back alignment and structure |
| >pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin Length = 375 | Back alignment and structure |
| >pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex Length = 374 | Back alignment and structure |
| >pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex Length = 374 | Back alignment and structure |
| >pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN Complex With Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment 1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT 228: Q228kT229AA230YE360H) Length = 375 | Back alignment and structure |
| >pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment 1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT 228: Q228kT229AA230YE360H) Length = 375 | Back alignment and structure |
| >pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex Length = 374 | Back alignment and structure |
| >pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex Length = 374 | Back alignment and structure |
| >pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 375 | Back alignment and structure |
| >pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 375 | Back alignment and structure |
| >pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin Complexed With Ca Atp And Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin Complexed With Ca Atp And Human Gelsolin Segment 1 Length = 375 | Back alignment and structure |
| >pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound State Length = 374 | Back alignment and structure |
| >pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound State Length = 374 | Back alignment and structure |
| >pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin And The Last Poly-Pro Of Human Vasp Length = 375 | Back alignment and structure |
| >pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin And The Last Poly-Pro Of Human Vasp Length = 375 | Back alignment and structure |
| >pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin D Length = 375 | Back alignment and structure |
| >pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin D Length = 375 | Back alignment and structure |
| >pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 368 | Back alignment and structure |
| >pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 368 | Back alignment and structure |
| >pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex Length = 373 | Back alignment and structure |
| >pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex Length = 373 | Back alignment and structure |
| >pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 372 | Back alignment and structure |
| >pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 372 | Back alignment and structure |
| >pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide Length = 371 | Back alignment and structure |
| >pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide Length = 371 | Back alignment and structure |
| >pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of Phosphate Length = 376 | Back alignment and structure |
| >pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of Phosphate Length = 376 | Back alignment and structure |
| >pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C Length = 375 | Back alignment and structure |
| >pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C Length = 375 | Back alignment and structure |
| >pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In Complex With Skeletal Actin Length = 375 | Back alignment and structure |
| >pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In Complex With Skeletal Actin Length = 375 | Back alignment and structure |
| >pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 377 | Back alignment and structure |
| >pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 377 | Back alignment and structure |
| >pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin Length = 376 | Back alignment and structure |
| >pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin Length = 376 | Back alignment and structure |
| >pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit Skeletal Muscle Actin And Latrunculin A At 2.85 A Resolution Length = 377 | Back alignment and structure |
| >pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit Skeletal Muscle Actin And Latrunculin A At 2.85 A Resolution Length = 377 | Back alignment and structure |
| >pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365 | Back alignment and structure |
| >pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form Length = 371 | Back alignment and structure |
| >pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form Length = 371 | Back alignment and structure |
| >pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 370 | Back alignment and structure |
| >pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 370 | Back alignment and structure |
| >pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That Nucleates Filament Assembly: Crystal Structure At 3.5 A Resolution Length = 371 | Back alignment and structure |
| >pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That Nucleates Filament Assembly: Crystal Structure At 3.5 A Resolution Length = 371 | Back alignment and structure |
| >pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized With Atp And Crosslinked With Glutaraldehyde Length = 394 | Back alignment and structure |
| >pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized With Atp And Crosslinked With Glutaraldehyde Length = 394 | Back alignment and structure |
| >pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX Length = 394 | Back alignment and structure |
| >pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX Length = 394 | Back alignment and structure |
| >pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 | Back alignment and structure |
| >pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 | Back alignment and structure |
| >pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 364 | Back alignment and structure |
| >pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 364 | Back alignment and structure |
| >pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 | Back alignment and structure |
| >pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357 | Back alignment and structure |
| >pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The Implication For Filament Nucleation Length = 359 | Back alignment and structure |
| >pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The Implication For Filament Nucleation Length = 359 | Back alignment and structure |
| >pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 427 | Back alignment and structure |
| >pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 427 | Back alignment and structure |
| >pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX Length = 418 | Back alignment and structure |
| >pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX Length = 418 | Back alignment and structure |
| >pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S. Cerevisiae Complexed With Atp Length = 498 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Length = 375 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-32
Identities = 60/274 (21%), Positives = 121/274 (44%), Gaps = 37/274 (13%)
Query: 25 DSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKER---GKKDGETQVGNDISNIE 81
D + +V DNG+ + G+A + P +F +++ +PR + G ++ VG++ +
Sbjct: 3 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 82 AVRFQLKTQFDKNVVTHYDIQEQIFDYAFSH-LSINTEGNVNHPIVLTEPFLNPNYSRSL 140
+ LK + ++T++D E+I+ + F + L + E HP +LTE LNP +R
Sbjct: 63 GI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE---EHPTLLTEAPLNPKANREK 118
Query: 141 MSELLFECYQVPSVCYGIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWEGQSGVIISCG 200
M++++FE + VP++ I ++ S + + G +G+++ G
Sbjct: 119 MTQIMFETFNVPAMYVAIQAVLS------------LYASGR----------TTGIVLDSG 156
Query: 201 YQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHKLLQLKYPSHINSITPSRSEELLWDY 260
TH +P+ G R+DL G + +L K+L + S + + ++
Sbjct: 157 DGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKL 216
Query: 261 GFVATDYREHLRKWLD-------AEFYDSNVVKV 287
+VA D+ + E D V+ +
Sbjct: 217 CYVALDFENEMATAASSSSLEKSYELPDGQVITI 250
|
| >2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Length = 375 | Back alignment and structure |
|---|
| >1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Length = 394 | Back alignment and structure |
|---|
| >1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Length = 394 | Back alignment and structure |
|---|
| >1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Length = 418 | Back alignment and structure |
|---|
| >1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Length = 418 | Back alignment and structure |
|---|
| >3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 427 | Back alignment and structure |
|---|
| >3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 427 | Back alignment and structure |
|---|
| >3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498 | Back alignment and structure |
|---|
| >3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 691 | |||
| 3dwl_A | 427 | Actin-related protein 3; propellor, actin-binding, | 100.0 | |
| 3qb0_A | 498 | Actin-related protein 4; actin fold, ATP binding, | 100.0 | |
| 2fxu_A | 375 | Alpha-actin-1, actin, alpha skeletal muscle; actin | 100.0 | |
| 4fo0_A | 593 | Actin-related protein 8; chromatin remodeling, nuc | 100.0 | |
| 1k8k_B | 394 | ARP2, actin-like protein 2; beta-propeller, struct | 100.0 | |
| 1k8k_A | 418 | ARP3, actin-like protein 3, actin-2; beta-propelle | 100.0 | |
| 4am6_A | 655 | Actin-like protein ARP8; nuclear protein, chromati | 100.0 | |
| 1jce_A | 344 | ROD shape-determining protein MREB; MBL, actin, HS | 100.0 | |
| 3h1q_A | 272 | Ethanolamine utilization protein EUTJ; ethanolamin | 99.83 | |
| 2v7y_A | 509 | Chaperone protein DNAK; HSP70, heat shock protein, | 99.78 | |
| 1dkg_D | 383 | Molecular chaperone DNAK; HSP70, GRPE, nucleotide | 99.74 | |
| 3qfu_A | 394 | 78 kDa glucose-regulated protein homolog; HSP70, K | 99.73 | |
| 3i33_A | 404 | Heat shock-related 70 kDa protein 2; protein-ADP c | 99.66 | |
| 2kho_A | 605 | Heat shock protein 70; molecular chaperone, HSP70, | 99.43 | |
| 1yuw_A | 554 | Heat shock cognate 71 kDa protein; chaperone; 2.60 | 99.4 | |
| 3d2f_A | 675 | Heat shock protein homolog SSE1; nucleotide exchan | 99.3 | |
| 4gni_A | 409 | Putative heat shock protein; HSP70-type ATPase, AT | 99.3 | |
| 2ych_A | 377 | Competence protein PILM; cell cycle, type IV pilus | 99.29 | |
| 4b9q_A | 605 | Chaperone protein DNAK; HET: ATP; 2.40A {Escherich | 99.12 | |
| 2fsj_A | 346 | Hypothetical protein TA0583; actin homologs, archa | 99.11 | |
| 4a2a_A | 419 | Cell division protein FTSA, putative; cell cycle, | 99.09 | |
| 4apw_A | 329 | ALP12; actin-like protein; 19.70A {Clostridium tet | 98.8 | |
| 2zgy_A | 320 | Plasmid segregation protein PARM; plasmid partitio | 98.18 | |
| 3js6_A | 355 | Uncharacterized PARM protein; partition, segregati | 98.17 | |
| 2d0o_A | 610 | DIOL dehydratase-reactivating factor large subunit | 97.54 | |
| 1nbw_A | 607 | Glycerol dehydratase reactivase alpha subunit; mol | 97.34 | |
| 1t6c_A | 315 | Exopolyphosphatase; alpha/beta protein, actin-like | 94.97 | |
| 3cer_A | 343 | Possible exopolyphosphatase-like protein; NESG, BL | 94.12 | |
| 3mdq_A | 315 | Exopolyphosphatase; structural genomics, joint cen | 94.09 | |
| 3hi0_A | 508 | Putative exopolyphosphatase; 17739545, structural | 93.73 | |
| 1u6z_A | 513 | Exopolyphosphatase; alpha/beta protein, askha (ace | 93.55 | |
| 4ehu_A | 276 | Activator of 2-hydroxyisocaproyl-COA dehydratase; | 92.2 |
| >3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-80 Score=687.33 Aligned_cols=378 Identities=21% Similarity=0.377 Sum_probs=313.9
Q ss_pred cCCCCceEEEEcCCceEEEEEeCCCCCcEEEecceeecccCC-------------------------CCcCCcceecccc
Q psy7893 23 LRDSSLPIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKER-------------------------GKKDGETQVGNDI 77 (691)
Q Consensus 23 ~~~~~~~vVID~GS~~~KaG~age~~P~~viPs~vg~~~~~~-------------------------~~~~~~~~vG~ea 77 (691)
|+.+.++|||||||++|||||||++.|+++|||+||+++... +..+.+++||+++
T Consensus 1 m~~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea 80 (427)
T 3dwl_A 1 MASFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDA 80 (427)
T ss_dssp --CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHH
T ss_pred CCCCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHH
Confidence 444678999999999999999999999999999999987530 1112356999999
Q ss_pred ccccccccEEecccccCcccCHHHHHHHHHHHH-hhcCCCCCCCCCccEEEEecCCCchHHHHHHHHHHHHhcCCCeEee
Q psy7893 78 SNIEAVRFQLKTQFDKNVVTHYDIQEQIFDYAF-SHLSINTEGNVNHPIVLTEPFLNPNYSRSLMSELLFECYQVPSVCY 156 (691)
Q Consensus 78 ~~~~~~~~~l~~Pi~~G~I~nwd~~e~iw~~~f-~~L~i~~~~~~~~pvLltEp~~~~~~~re~l~EilFE~f~vp~v~~ 156 (691)
..+....+.+++||++|+|+|||.+|.||+|+| +.|++++. +||||||||+++++..|++++|++||+||||++++
T Consensus 81 ~~~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~---~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l 157 (427)
T 3dwl_A 81 LKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPE---DHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYI 157 (427)
T ss_dssp HHTHHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGG---GCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEE
T ss_pred hhCcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCc---CCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeee
Confidence 877653588999999999999999999999998 57998886 89999999999999999999999999999999999
Q ss_pred chhhHHhhhhccCCCCCCccccccccccccCCCC-CceEEEEEeCCceEEEEEeecCeecccCeEEeeccHHHHHHHHHH
Q psy7893 157 GIDSLFSYQYNGWEGQSGVIISCGYQVYQYNGWE-GQSGVIISCGYQCTHVIPVINGCIDASKAKRIDLGGFSVIHHLHK 235 (691)
Q Consensus 157 ~~~alla~ya~~~~~~~G~~~~~~~~~~~~~~~~-~~sgLVVDiG~~~T~IvPV~dG~vl~~a~~ri~iGG~~lt~yL~~ 235 (691)
+.+++||+|++ |.. ..+.. .++|||||+|+++|||+||++|+++.++++|+++||+++|+||++
T Consensus 158 ~~~~vla~~a~------G~~---------~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~ 222 (427)
T 3dwl_A 158 AVQAVLALAAS------WTS---------SKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQS 222 (427)
T ss_dssp EEHHHHHHHGG------GGS---------TTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHH
T ss_pred cchHHHHHHhc------CCc---------ccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHH
Confidence 99999999999 630 00000 289999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCCCChHHHHHHHHHheeeeccHHHHHHhhhhcccccccccccccCccCCCCCCchHHHHHHHHHHHHHHH
Q psy7893 236 LLQLKYPSHINSITPSRSEELLWDYGFVATDYREHLRKWLDAEFYDSNVVKVQLPYAVPVPNLTTEQQKDRRKELAKKLV 315 (691)
Q Consensus 236 lL~~~~~~~~~~~~~~~~e~IKe~~cyva~dy~~el~~~~~~~~~~~~~~~~qlp~~~~~~~~~~~~~~~~~~~~~~~l~ 315 (691)
+|+.+++. .....++++|||++|||+.||.+++..+...
T Consensus 223 lL~~~~~~---~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~-------------------------------------- 261 (427)
T 3dwl_A 223 LLRDRNEP---DSSLKTAERIKEECCYVCPDIVKEFSRFDRE-------------------------------------- 261 (427)
T ss_dssp TTC-----------CHHHHHHHHHHCCCCSCHHHHHHHTTC---------------------------------------
T ss_pred HHHHcCCC---chhHHHHHHHHHhcCcccCCHHHHHHHhhcC--------------------------------------
Confidence 99988764 4456789999999999999987765431100
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHhcCCCChhhHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHhhcCCCCCC
Q psy7893 316 EMNAKKREERLVDDERHLNELLELREIVELTPSDHSHAREAFKSMGINNIQDLNKSINQLQQKIEKTKAKIIAYNNGEDL 395 (691)
Q Consensus 316 ~~~~~kr~~~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~i~~~~~~~~k~~~k~~~~~~~~~l 395 (691)
..
T Consensus 262 --------------------------------------------------------------------------~~---- 263 (427)
T 3dwl_A 262 --------------------------------------------------------------------------PD---- 263 (427)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------cc----
Confidence 00
Q ss_pred CchhhhhhhhhhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhccCCCCCCCC
Q psy7893 396 TEEPKAKLSKEIAVPESEAEFKAWLIETKKKRAYIIDKKNARKQRRQDLAKRRTAAAQERMRLISELARKEKRDDDFGMR 475 (691)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~k~~~r~~~~~~~~~~~s~~~q~r~~~~~~l~~~~~~~d~~~~~ 475 (691)
. ...|.+.
T Consensus 264 ---------------------------------~---------------------------------------~~~~~l~ 271 (427)
T 3dwl_A 264 ---------------------------------R---------------------------------------YLKYASE 271 (427)
T ss_dssp --------------------------------------------------------------------------CCBCC-
T ss_pred ---------------------------------c---------------------------------------cceeEee
Confidence 0 0011110
Q ss_pred CcchhhhhhhccCCCCCChHHHHHHHHHHHHHHhhCCCCccccccccccCCCCC--cEEEecceeeeecccccCCCCCCC
Q psy7893 476 DEDWDVYKVINKDAGDTDSEEEQERLIELEEILRQHDPEFTSLNQEQELSPKEA--NQLHIGVERMCGPECLFQPSMLGS 553 (691)
Q Consensus 476 d~dw~~y~~~~~~~~~~~~~~~~~~l~~~~~~l~~~dp~~~~~~~~~~~~~~~~--~~i~l~~Er~~~pE~LF~Ps~ig~ 553 (691)
.++| +.|.|+.|||+|||+||+|+++|.
T Consensus 272 --------------------------------------------------~~~g~~~~i~ig~erf~~pE~LF~P~~~g~ 301 (427)
T 3dwl_A 272 --------------------------------------------------SITGHSTTIDVGFERFLAPEIFFNPEIASS 301 (427)
T ss_dssp ----------------------------------------------------------CBCCTHHHHSGGGGTCGGGTCS
T ss_pred --------------------------------------------------CCCCCeeEEEEChHhhhChhhccCchhcCC
Confidence 0123 378999999999999999999999
Q ss_pred c-ccChHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhhcC--------------CCCceeEEEeccC
Q psy7893 554 I-QAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLENR--------------PFQSHFSVSLAEN 618 (691)
Q Consensus 554 ~-~~Gl~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~l~--------------p~~~~i~V~~~~d 618 (691)
+ ..||+++|.++|.+||+|+|+.|++||+||||+|+||||.+||++||+.+. |...+|+|..+++
T Consensus 302 ~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~ 381 (427)
T 3dwl_A 302 DFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKR 381 (427)
T ss_dssp SCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTT
T ss_pred ccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCc
Confidence 9 599999999999999999999999999999999999999999999999997 4566799999999
Q ss_pred CccceeehhhhhcCccccccccccHHHHhhhchhhHhhcCC
Q psy7893 619 PELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFRVHPC 659 (691)
Q Consensus 619 p~~~aW~Gasilas~~~f~~~~itk~eYeE~G~~~~~~k~~ 659 (691)
|.+++|+|||+||++++|+++||||+||+|+|++++++|+.
T Consensus 382 r~~s~WiGGSilasl~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 382 QRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp CTTHHHHHHHHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred cccceecCceeeccccchhheeEEHHHHhhhChHhheeccc
Confidence 99999999999999999999999999999999999998764
|
| >3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... | Back alignment and structure |
|---|
| >4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* | Back alignment and structure |
|---|
| >1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A | Back alignment and structure |
|---|
| >4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A* | Back alignment and structure |
|---|
| >1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A | Back alignment and structure |
|---|
| >3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} | Back alignment and structure |
|---|
| >2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 | Back alignment and structure |
|---|
| >3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... | Back alignment and structure |
|---|
| >2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} | Back alignment and structure |
|---|
| >1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* | Back alignment and structure |
|---|
| >3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* | Back alignment and structure |
|---|
| >4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} | Back alignment and structure |
|---|
| >2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
| >4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D | Back alignment and structure |
|---|
| >2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* | Back alignment and structure |
|---|
| >4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* | Back alignment and structure |
|---|
| >4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} | Back alignment and structure |
|---|
| >2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A | Back alignment and structure |
|---|
| >3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A | Back alignment and structure |
|---|
| >1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 | Back alignment and structure |
|---|
| >1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A* | Back alignment and structure |
|---|
| >3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705} | Back alignment and structure |
|---|
| >3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
| >3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A* | Back alignment and structure |
|---|
| >4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 691 | ||||
| d1k8ka1 | 158 | c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 { | 4e-27 | |
| d2fxua1 | 140 | c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: | 7e-27 | |
| d2fxua2 | 225 | c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxI | 1e-22 | |
| d2fxua2 | 225 | c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxI | 7e-10 | |
| d1k8kb1 | 190 | c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 | 8e-13 | |
| d1k8kb1 | 190 | c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 | 2e-10 | |
| d1k8ka2 | 258 | c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 | 2e-12 | |
| d1k8ka2 | 258 | c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 | 5e-11 |
| >d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Actin-related protein 3, Arp3 species: Cow (Bos taurus) [TaxId: 9913]
Score = 105 bits (263), Expect = 4e-27
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 29 PIVFDNGAWCCRVGWASCEKPNLIFKNLIAKPRKER-----------GKKDGETQVGNDI 77
V D G ++G+A +P I + IA + G D + +G++
Sbjct: 5 ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDE- 63
Query: 78 SNIEAVRFQLKTQFDKNVVTHYDIQEQIFDYAFSH-LSINTEGNVNHPIVLTEPFLNPNY 136
IE + K +V +D+ E+ + L E +H +LTEP LN
Sbjct: 64 -AIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPE---DHYFLLTEPPLNTPE 119
Query: 137 SRSLMSELLFECYQVPSVCYGIDSLFS 163
+R +E++FE + VP + + ++ +
Sbjct: 120 NREYTAEIMFESFNVPGLYIAVQAVLA 146
|
| >d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 140 | Back information, alignment and structure |
|---|
| >d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 225 | Back information, alignment and structure |
|---|
| >d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 225 | Back information, alignment and structure |
|---|
| >d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Length = 190 | Back information, alignment and structure |
|---|
| >d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Length = 190 | Back information, alignment and structure |
|---|
| >d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 258 | Back information, alignment and structure |
|---|
| >d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 258 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 691 | |||
| d2fxua2 | 225 | Actin {Cow (Bos taurus) [TaxId: 9913]} | 100.0 | |
| d1k8ka2 | 258 | Actin-related protein 3, Arp3 {Cow (Bos taurus) [T | 100.0 | |
| d1k8kb1 | 190 | Actin-related protein 2, Arp2 {Cow (Bos taurus) [T | 100.0 | |
| d1k8ka1 | 158 | Actin-related protein 3, Arp3 {Cow (Bos taurus) [T | 99.97 | |
| d2fxua1 | 140 | Actin {Cow (Bos taurus) [TaxId: 9913]} | 99.96 | |
| d1e4ft2 | 191 | Cell division protein FtsA {Thermotoga maritima [T | 98.88 | |
| d1jcea2 | 196 | Prokaryotic actin homolog MreB {Thermotoga maritim | 98.61 | |
| d1jcea1 | 137 | Prokaryotic actin homolog MreB {Thermotoga maritim | 98.05 | |
| d1dkgd2 | 198 | Heat shock protein 70kDa, ATPase fragment {Escheri | 97.51 | |
| d1bupa2 | 193 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 97.48 | |
| d1bupa1 | 185 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 96.61 | |
| d1dkgd1 | 183 | Heat shock protein 70kDa, ATPase fragment {Escheri | 96.12 | |
| d2fsja1 | 161 | Hypothetical protein Ta0583 {Archaeon Thermoplasma | 93.94 | |
| d2zgya2 | 163 | Plasmid segregation protein ParM {Escherichia coli | 93.52 | |
| d2zgya2 | 163 | Plasmid segregation protein ParM {Escherichia coli | 88.72 | |
| d2fsja2 | 164 | Hypothetical protein Ta0583 {Archaeon Thermoplasma | 85.24 | |
| d1t6ca2 | 180 | Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6 | 84.46 | |
| d1u6za3 | 177 | Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5 | 81.22 |
| >d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Actin species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8.2e-49 Score=396.26 Aligned_cols=132 Identities=25% Similarity=0.437 Sum_probs=128.0
Q ss_pred cCCCCCcEEEecceeeeecccccCCCCCCCcccChHHHHHHHhccCCHHHHHHhhcCEEEeccCCCccchHHHHHHHHhh
Q psy7893 524 LSPKEANQLHIGVERMCGPECLFQPSMLGSIQAGISETLNFVLNSYPQHIAQSLANNIFVTGSLCQLPGFVERLNKDLLE 603 (691)
Q Consensus 524 ~~~~~~~~i~l~~Er~~~pE~LF~Ps~ig~~~~Gl~e~i~~si~~~~~d~r~~L~~nI~LtGG~s~~~Gf~eRL~~EL~~ 603 (691)
|.+|||+.+.++.|||.+||+||+|..+|.+..||+++|.+||.+||.|+|+.|++||+||||+|+||||.+||++||..
T Consensus 94 ~~lpdg~~i~i~~er~~~~E~lF~p~~~~~~~~gl~~~i~~sI~~~~~d~r~~l~~nIvl~GG~s~~~G~~~RL~~El~~ 173 (225)
T d2fxua2 94 YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITA 173 (225)
T ss_dssp EECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHH
T ss_pred EECCCCCEEEEchHhccccHhhcCccccCCccCChhHHHHHHhhcCCcchhhhhhcCEEEeCCcccCCchhHHHHhHHHH
Confidence 45677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceeEEEeccCCccceeehhhhhcCccccccccccHHHHhhhchhhHh
Q psy7893 604 NRPFQSHFSVSLAENPELDAWSGARQFSLSENFHDFAVTQSDYQEKGGEFFR 655 (691)
Q Consensus 604 l~p~~~~i~V~~~~dp~~~aW~Gasilas~~~f~~~~itk~eYeE~G~~~~~ 655 (691)
+.|....++|..+++|.++||+|||+||++++|+++||||+||+|+|++++|
T Consensus 174 ~~~~~~~~~v~~~~~~~~~aW~Ggsilasl~~f~~~~itk~eY~E~G~~ivh 225 (225)
T d2fxua2 174 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 225 (225)
T ss_dssp HSCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC
T ss_pred hhccccceEEecCCCCCeeEEeCHhhhhcCccHhhEEEEHHHHHhhCccccC
Confidence 9999999999999999999999999999999999999999999999999985
|
| >d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|