Diaphorina citri psyllid: psy78

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
MFFQLILMVSMQIISFIIVHKFAWFEPFVYTNAISYSCYENYAVFSISMFQYIILAITFSQGKPYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFIENFIIHYLLMIKFKRWSNDYKSCKYIGIENELDSNYMWPKLSSDPEPNYEILRGRSLWDIVIKSLDIITIVIPPALPATMTVGKLYALTRLKKYNISCINSRVINLMTVGKLYALTRLKKYNISCINSRVINVSGSINCVCFDKMFESTGWTLEEPMKFVPENIVSVLSEYTEQGYRVIALASRTLSIEDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESPID
cHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHEEcccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHcHHHHHccccccccccccccccccccccccccHHHcccccccCECcccccccHHHHHHHHHHHHHccccEEEEcccEEEEcccccEEEEEEEEEEEEccccEEEEEEccccccEEEEECcccccHHHcccccccccHHHHHHHHHHHcccEEEEEEEEEcccccHHHHHHHcHHHHHcccccccEEEECcccccccHHHHHHHHHccccEEEEEccHHHHHHHHHHcccccccccCEEEEEccccccccccEEEEEEccccccccccccccccccHHHHccccccEEEEEEHHHHHHHHHHcccHHHHHHcccEEEEccccccHHHHHHHHHHcccEEEEEcccccccHHHHHccccccccccccccc
MFFQLILMVSMQIISFIIVHKFAWFEPFVYTNAISYSCYENYAVFSISMFQYIILAITFSQGKPYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFIENFIIHYLLMIKFKRWSNDYKSCKYIGIENELDSNYMWPKLSSDPEPNYEILRGRSLWDIVIKSLDIITIVIPPALPATMTVGKLYALTRLKKYNISCINSRVINLMTVGKLYALTRLKKYNISCINSRVINVSGSINCVCFDKMFESTGWTLEEPMKFVPENIVSVLSEYTEQGYRVIALASRTLSIEDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEA*****
xxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MFFQLILMVSMQIISFIIVHKFAWFEPFVYTNAISYSCYENYAVFSISMFQYIILAITFSQGKPYRTPIYKNKLFILSIIIMTWVCIYITLIPSEFIIQFLQLRFPPNMQFPLIVIYLAICNFVLSLFIENFIIHYLLMIKFKRWSNDYKSCKYIGIENELDSNYMWPKLSSDPEPNYEILRGRSLWDIVIKSLDIITIVIPPALPATMTVGKLYALTRLKKYNISCINSRVINLMTVGKLYALTRLKKYNISCINSRVINVSGSINCVCFDKMFESTGWTLEEPMKFVPENIVSVLSEYTEQGYRVIALASRTLSIEDYKHLNYMKREDIEKDLEFLGLIILENRLKPQTEGVIKELKDARVKVVMITGDNIQTAISVAKECGIIDPGETVVDVSAVPGGLKECPKVYFTVSGVSAIQTKAKKLNYSKTEEELGLSSGAYKFAVTGKSWELIRDQMPELIPRIIVKGAIFARMSSDQKQQLVLELQQLGYYVAMCGDGANDCGALRAAHAGISLSEAESPID

Function Prediction

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016020 [CC]membraneprobableGO:0005575
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3J08, chain A
Confidence level:very confident
Coverage over the Query: 183-223,251-386,469-521
View the alignment between query and template
View the model in PyMOL
Template: 3IXZ, chain A
Confidence level:very confident
Coverage over the Query: 181-394,420-520
View the alignment between query and template
View the model in PyMOL
Template: 3PGV, chain A
Confidence level:confident
Coverage over the Query: 334-522
View the alignment between query and template
View the model in PyMOL
Template: 2ZXE, chain A
Confidence level:confident
Coverage over the Query: 40-111
View the alignment between query and template
View the model in PyMOL