Diaphorina citri psyllid: psy7914


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
MSVQTSSHYGEDIKSSGRAGAMDLYEGLSDPILQDWKDIVNLQKHWIGEPNGVRFEFQILPQPEGTSNSAPTADTLSIWLPEDTIEDVAKSQGQYITVKSSHILASKTKEKLTENVKHQIENKYKSIVSSDPMLRDRKKPVCGESLNQVLKLVCDGVYRRRRSISSPSDFGVSSVGGTLEGKRREDNFYVLSMFPYPSGSLHMGHVRVYTISDTLARYYAMNGKNVFQPMGWDAFGLPAENAAHQHGIDPREWTVGNIATMKSQLQGFGCKFNWESELATCDPKYYKWTQALFLDLYHAGLVYRKEATVNWDPIDNTVLADEQVDEQGISWRSGARVEKRRLSQWFIRTTRLANLVSLVDSVSAL
ccccccccccccccccccccHHHHHccccccccccHHHHHHHHHccccccccEEEEEEEccccccccccccccccEEEEccccccccccccccEEEEEccccccccccHHHHccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccEEccccccccccccccccccEEEccccEEEEccccccHHHHHHHHccc
*************KSSGRAGAMDLYEGLSDPILQDWKDIVNLQKHWIGEPNGVRFEFQILPQPEGTSNSAPTADTLSIWLPEDTIEDVAKSQGQYITVKSSHILA*********NVKHQIENKYKSIVSSDPMLRDRKKPVCGESLNQVLKLVCDGVYRRRRSISSPSDFGV***********REDNFYVLSMFPYPSGSLHMGHVRVYTISDTLARYYAMNGKNVFQPMGWDAFGLPAENAAHQHGIDPREWTVGNIATMKSQLQGFGCKFNWESELATCDPKYYKWTQALFLDLYHAGLVYRKEATVNWDPIDNTVLADEQVDEQGISWRSGARVEKRRLSQWFIRTTRLANLVSLVDSVSA*
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MSVQTSSHYGEDIKSSGRAGAMDLYEGLSDPILQDWKDIVNLQKHWIGEPNGVRFEFQILPQPEGTSNSAPTADTLSIWLPEDTIEDVAKSQGQYITVKSSHILASKTKEKLTENVKHQIENKYKSIVSSDPMLRDRKKPVCGESLNQVLKLVCDGVYRRRRSISSPSDFGVSSVGGTLEGKRREDNFYVLSMFPYPSGSLHMGHVRVYTISDTLARYYAMNGKNVFQPMGWDAFGLPAENAAHQHGIDPREWTVGNIATMKSQLQGFGCKFNWESELATCDPKYYKWTQALFLDLYHAGLVYRKEATVNWDPIDNTVLADEQVDEQGISWRSGARVEKRRLSQWFIRTTRLANLVSLVDSVSAL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Leucine--tRNA ligase confidentQ3M3A3
Leucine--tRNA ligase confidentQ7VBZ5
Leucine--tRNA ligase confidentQ2JHX0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016070 [BP]RNA metabolic processprobableGO:0006139, GO:0044260, GO:0044238, GO:0009987, GO:0006725, GO:0044237, GO:0043170, GO:0090304, GO:0071704, GO:0034641, GO:0006807, GO:0008150, GO:0008152, GO:1901360, GO:0046483
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0006412 [BP]translationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2V0C, chain A
Confidence level:very confident
Coverage over the Query: 186-360
View the alignment between query and template
View the model in PyMOL
Template: 2V0C, chain A
Confidence level:very confident
Coverage over the Query: 16-62,73-108
View the alignment between query and template
View the model in PyMOL
Template: 2ZUE, chain A
Confidence level:confident
Coverage over the Query: 80-126,150-319
View the alignment between query and template
View the model in PyMOL
Template: 3AII, chain A
Confidence level:confident
Coverage over the Query: 179-235,252-314
View the alignment between query and template
View the model in PyMOL