Psyllid ID: psy8005

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-
Protein Sequence
MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQA
Secondary Structure (PSIPRED)
ccccccccccccccccEEEEcEEcccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccEEEEEEEcHHcccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccccEEEEEEEEEcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccEEEEEEccccHccEEEEHHHHHHHHHcc
Coil and Loop (DISEMBL)
mvntkitksfplgkyatvrrcrdrknGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQA
Flexible Loop (DISEMBL)
mvntkitksfplgkyatvrrcrdrkngtqyaakflrkkrrstdlKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQA
Low Complexity Region (SEG)
MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIlllelldlNHHQA
Disordered region (IsUnstruct)
*********FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL*****
Disordered Region (DISOPRED)
*VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR***LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQA
Disordered Region (DISEMBL)
MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQA
Disordered Region (DISPRO)
MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQ*
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	91	2.2.26 [Sep-21-2011]
O94768	372	Serine/threonine-protein	yes	N/A	0.835	0.204	0.486	1e-16
Q91XS8	371	Serine/threonine-protein	yes	N/A	0.868	0.212	0.481	2e-16
Q9GM70	397	Serine/threonine-protein	no	N/A	0.769	0.176	0.485	5e-16
Q9UEE5	414	Serine/threonine-protein	no	N/A	0.769	0.169	0.471	2e-15
Q8BG48	372	Serine/threonine-protein	yes	N/A	0.868	0.212	0.468	3e-15
O44997	1425	Death-associated protein	yes	N/A	0.791	0.050	0.473	3e-13
Q0KHT7	784	Probable serine/threonine	yes	N/A	0.813	0.094	0.459	1e-11
Q80YE7	1442	Death-associated protein	no	N/A	0.780	0.049	0.381	9e-10
O43293	454	Death-associated protein	no	N/A	0.780	0.156	0.407	1e-09
P53355	1430	Death-associated protein	no	N/A	0.780	0.049	0.368	3e-09

>sp|O94768|ST17B_HUMAN Serine/threonine-protein kinase 17B OS=Homo sapiens GN=STK17B PE=1 SV=1

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 56/76 (73%)

Query: 7   TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQ 66
           +K    GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +   R++ 
Sbjct: 36  SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 95

Query: 67  LHQVFESSHDMILLLE 82
           LH+V+E++ ++IL+LE
Sbjct: 96  LHEVYENTSEIILILE 111

Acts as a positive regulator of apoptosis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q91XS8|ST17B_RAT Serine/threonine-protein kinase 17B OS=Rattus norvegicus GN=Stk17b PE=1 SV=1

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 55/79 (69%)

Query: 4   TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR 63
           T   K    GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  R    
Sbjct: 33  TLTPKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELARSCPH 92

Query: 64  IVQLHQVFESSHDMILLLE 82
           ++ LH+V+E++ ++IL+LE
Sbjct: 93  VINLHEVYETATEIILVLE 111

Acts as a positive regulator of apoptosis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9GM70|ST17A_RABIT Serine/threonine-protein kinase 17A OS=Oryctolagus cuniculus GN=STK17A PE=2 SV=1

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/70 (48%), Positives = 54/70 (77%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           GK+A VR+C  + +G ++AAKF+RK+R+  D + EI+HE+AVLE  + N  ++ LH+V+E
Sbjct: 53  GKFAVVRKCIQKDSGKEFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVYE 112

Query: 73  SSHDMILLLE 82
           +S +MIL+LE
Sbjct: 113 TSSEMILVLE 122

Acts as a positive regulator of apoptosis. May also act as a regulator of cellular reactive oxygen species.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UEE5|ST17A_HUMAN Serine/threonine-protein kinase 17A OS=Homo sapiens GN=STK17A PE=1 SV=2

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/70 (47%), Positives = 54/70 (77%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           GK+A VR+C  + +G ++AAKF+RK+R+  D + EI+HE+AVLE  + N  ++ LH+V+E
Sbjct: 70  GKFAVVRKCIKKDSGKEFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVYE 129

Query: 73  SSHDMILLLE 82
           ++ +MIL+LE
Sbjct: 130 TASEMILVLE 139

Acts as a positive regulator of apoptosis. Also acts as a regulator of cellular reactive oxygen species.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8BG48|ST17B_MOUSE Serine/threonine-protein kinase 17B OS=Mus musculus GN=Stk17b PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/79 (46%), Positives = 54/79 (68%)

Query: 4   TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR 63
           T   K    GK+A VR+C  +  G +YAAK L+K+RR  D +AEILHE+AVLE  R    
Sbjct: 33  TLTPKELGRGKFAVVRQCISKSTGQEYAAKSLKKRRRGQDCRAEILHEIAVLELARSCPH 92

Query: 64  IVQLHQVFESSHDMILLLE 82
           ++ LH+V+E++ ++IL+LE
Sbjct: 93  VINLHEVYENATEIILVLE 111

Acts as a positive regulator of apoptosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O44997|DAPK_CAEEL Death-associated protein kinase dapk-1 OS=Caenorhabditis elegans GN=dapk-1 PE=2 SV=2

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 54/76 (71%), Gaps = 4/76 (5%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
           G++A VRR RDRK G +YAAKF++K+R +T  +      I  EV VL+  R NS +V+LH
Sbjct: 37  GQFAVVRRVRDRKTGEKYAAKFIKKRRYATSRRGVTRQNIEREVRVLQKIRGNSNVVELH 96

Query: 69  QVFESSHDMILLLELL 84
            V+E++ D+I++LEL+
Sbjct: 97  AVYETASDVIIVLELV 112

Negative regulator of barrier repair and innate immune responses to wounding. Appears to act downstream from or in parallel to muscarinic signaling in the regulation of autophagy.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0KHT7|Y2666_DROME Probable serine/threonine-protein kinase CG32666 OS=Drosophila melanogaster GN=CG32666 PE=1 SV=1

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/74 (45%), Positives = 45/74 (60%)

Query: 10  FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQ 69
           F  GK+A VRR   +  G+ +AAKFL+++RR+     EI HE+AVL  C     IV L+ 
Sbjct: 43  FARGKFAAVRRAIHKNTGSHFAAKFLKRRRRAQSSDKEIKHEIAVLMLCEGEDNIVNLNA 102

Query: 70  VFESSHDMILLLEL 83
           V E+  D  LLLEL
Sbjct: 103 VHETRSDTALLLEL 116

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q80YE7|DAPK1_MOUSE Death-associated protein kinase 1 OS=Mus musculus GN=Dapk1 PE=1 SV=3

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 53/76 (69%), Gaps = 5/76 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  R +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIR-HPNVITLH 80

Query: 69 QVFESSHDMILLLELL 84
          +V+E+  D+IL+LEL+
Sbjct: 81 EVYENKTDVILILELV 96

Calcium/calmodulin-dependent serine/threonine kinase involved in multiple cellular signaling pathways that trigger cell survival, apoptosis, and autophagy. Regulates both type I apoptotic and type II autophagic cell deaths signal, depending on the cellular setting. The former is caspase-dependent, while the latter is caspase-independent and is characterized by the accumulation of autophagic vesicles. Phosphorylates PIN1 resulting in inhibition of its catalytic activity, nuclear localization, and cellular function. Phosphorylates TPM1, enhancing stress fiber formation in endothelial cells. Phosphorylates STX1A and significantly decreases its binding to STXBP1. Phosphorylates PRKD1 and regulates JNK signaling by binding and activating PRKD1 under oxidative stress. Phosphorylates BECN1, reducing its interaction with BCL2 and BCL2L1 and promoting the induction of autophagy. Phosphorylates TSC2, disrupting the TSC1-TSC2 complex and stimulating mTORC1 activity in a growth factor-dependent pathway. Phosphorylates RPS6, MYL9 and DAPK3 (By similarity). Acts as a signaling amplifier of NMDA receptors at extrasynaptic sites for mediating brain damage in stroke. Cerebral ischemia recruits DAPK1 into the NMDA receptor complex and it phosphorylates GRINB at Ser-1303 inducing injurious Ca(2+) influx through NMDA receptor channels, resulting in an irreversible neuronal death.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O43293|DAPK3_HUMAN Death-associated protein kinase 3 OS=Homo sapiens GN=DAPK3 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 5/76 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A VR+CR +  G +YAAKF++K+R S+  +     EI  EV +L   R +  I+ LH
Sbjct: 22 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 80

Query: 69 QVFESSHDMILLLELL 84
           +FE+  D++L+LEL+
Sbjct: 81 DIFENKTDVVLILELV 96

Isoform 2 can phosphorylate myosin, PPP1R12A and MYL12B.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P53355|DAPK1_HUMAN Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=6

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 53/76 (69%), Gaps = 5/76 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80

Query: 69 QVFESSHDMILLLELL 84
          +V+E+  D+IL+LEL+
Sbjct: 81 EVYENKTDVILILELV 96

Isoform 2 cannot induce apoptosis but can induce membrane blebbing.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
193613274	751	PREDICTED: hypothetical protein LOC10016	0.846	0.102	0.714	2e-24
242005347	822	death associated protein kinase, putativ	0.780	0.086	0.718	2e-20
383857727	578	PREDICTED: serine/threonine-protein kina	0.835	0.131	0.631	5e-20
156550883	757	PREDICTED: hypothetical protein LOC10011	0.835	0.100	0.644	8e-20
328776502	623	PREDICTED: serine/threonine-protein kina	0.835	0.121	0.618	1e-19
380022600	620	PREDICTED: serine/threonine-protein kina	0.835	0.122	0.618	2e-19
332025699	161	Serine/threonine-protein kinase 17A [Acr	0.813	0.459	0.648	2e-19
307204456	158	Serine/threonine-protein kinase 17A [Har	0.813	0.468	0.648	2e-19
340723644	618	PREDICTED: hypothetical protein LOC10064	0.835	0.122	0.605	3e-19
350426316	618	PREDICTED: hypothetical protein LOC10074	0.835	0.122	0.605	4e-19

>gi|193613274|ref|XP_001942516.1| PREDICTED: hypothetical protein LOC100165267 [Acyrthosiphon pisum]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 66/77 (85%)

Query: 7   TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQ 66
           ++ F  GKYATVRRCRD++ G QYAAKFLRK+RR+ DL+ EILHEVAVLEAC  NSRIV 
Sbjct: 51  SEPFARGKYATVRRCRDKQTGKQYAAKFLRKRRRNADLRPEILHEVAVLEACTYNSRIVN 110

Query: 67  LHQVFESSHDMILLLEL 83
           L++VFE+S +MILLLEL
Sbjct: 111 LYKVFETSTEMILLLEL 127

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242005347|ref|XP_002423531.1| death associated protein kinase, putative [Pediculus humanus corporis] gi|212506645|gb|EEB10793.1| death associated protein kinase, putative [Pediculus humanus corporis]

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/71 (71%), Positives = 60/71 (84%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          GKYATVRRCR RK G QYAAK+L+K+RRSTDL+ EILHEVAVL AC    RIV L QVFE
Sbjct: 23 GKYATVRRCRHRKTGVQYAAKYLKKRRRSTDLRYEILHEVAVLHACAQCPRIVNLIQVFE 82

Query: 73 SSHDMILLLEL 83
          ++++MIL+LEL
Sbjct: 83 TTNEMILVLEL 93

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857727|ref|XP_003704355.1| PREDICTED: serine/threonine-protein kinase 17A-like [Megachile rotundata]

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/76 (63%), Positives = 63/76 (82%)

Query: 8   KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 67
           + F  GKYATVRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V L
Sbjct: 41  QPFARGKYATVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAANCSRLVSL 100

Query: 68  HQVFESSHDMILLLEL 83
           HQVFE++ +M+L+LEL
Sbjct: 101 HQVFETNTEMVLVLEL 116

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156550883|ref|XP_001602292.1| PREDICTED: hypothetical protein LOC100118283 [Nasonia vitripennis]

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 49/76 (64%), Positives = 62/76 (81%)

Query: 8   KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 67
           + F  GKYATVRRCR+R +G Q+AAKFLRK+RR+ +LKAE LHEVAVL+A     R+V L
Sbjct: 41  QPFARGKYATVRRCRERTSGRQWAAKFLRKRRRAQELKAEALHEVAVLDAAAHCPRLVSL 100

Query: 68  HQVFESSHDMILLLEL 83
           HQVFE+S +M+L+LEL
Sbjct: 101 HQVFETSTEMVLVLEL 116

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776502|ref|XP_624284.2| PREDICTED: serine/threonine-protein kinase 17A-like [Apis mellifera]

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/76 (61%), Positives = 63/76 (82%)

Query: 8   KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 67
           + F  GKYATV+RCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V L
Sbjct: 41  QPFARGKYATVKRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAANCSRLVSL 100

Query: 68  HQVFESSHDMILLLEL 83
           HQVFE++ +M+L+LEL
Sbjct: 101 HQVFETNTEMVLVLEL 116

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022600|ref|XP_003695128.1| PREDICTED: serine/threonine-protein kinase 17A-like [Apis florea]

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/76 (61%), Positives = 63/76 (82%)

Query: 8   KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 67
           + F  GKYATV+RCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V L
Sbjct: 41  QPFARGKYATVKRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAANCSRLVSL 100

Query: 68  HQVFESSHDMILLLEL 83
           HQVFE++ +M+L+LEL
Sbjct: 101 HQVFETNTEMVLVLEL 116

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025699|gb|EGI65857.1| Serine/threonine-protein kinase 17A [Acromyrmex echinatior]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 62/74 (83%)

Query: 10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQ 69
          F  GKYATVRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V LHQ
Sbjct: 7  FLRGKYATVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAAHCSRLVSLHQ 66

Query: 70 VFESSHDMILLLEL 83
          VFE++ +M+L+LEL
Sbjct: 67 VFETNTEMVLVLEL 80

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204456|gb|EFN83163.1| Serine/threonine-protein kinase 17A [Harpegnathos saltator]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 62/74 (83%)

Query: 10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQ 69
          F  GKYATVRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V LHQ
Sbjct: 12 FFRGKYATVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAAHCSRLVSLHQ 71

Query: 70 VFESSHDMILLLEL 83
          VFE++ +M+L+LEL
Sbjct: 72 VFETNTEMVLVLEL 85

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723644|ref|XP_003400199.1| PREDICTED: hypothetical protein LOC100645807 [Bombus terrestris]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/76 (60%), Positives = 62/76 (81%)

Query: 8   KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 67
           + F  GKYA VRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V L
Sbjct: 41  QPFARGKYAAVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAASCSRLVSL 100

Query: 68  HQVFESSHDMILLLEL 83
           H+VFE++ +M+L+LEL
Sbjct: 101 HEVFETNTEMVLVLEL 116

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350426316|ref|XP_003494401.1| PREDICTED: hypothetical protein LOC100745919 [Bombus impatiens]

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/76 (60%), Positives = 62/76 (81%)

Query: 8   KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 67
           + F  GKYA VRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V L
Sbjct: 41  QPFARGKYAAVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAANCSRLVSL 100

Query: 68  HQVFESSHDMILLLEL 83
           H+VFE++ +M+L+LEL
Sbjct: 101 HEVFETNTEMVLVLEL 116

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
UNIPROTKB|Q5ZM34	372	STK17B "Uncharacterized protei	0.791	0.193	0.5	8.6e-15
UNIPROTKB|O94768	372	STK17B "Serine/threonine-prote	0.791	0.193	0.472	1.4e-14
RGD|620457	371	Stk17b "serine/threonine kinas	0.824	0.202	0.466	3.1e-14
UNIPROTKB|Q91XS8	371	Stk17b "Serine/threonine-prote	0.824	0.202	0.466	3.1e-14
UNIPROTKB|F1SN17	372	STK17B "Uncharacterized protei	0.824	0.201	0.453	3.1e-14
ZFIN|ZDB-GENE-040426-1499	354	stk17b "serine/threonine kinas	0.802	0.206	0.438	3.4e-14
UNIPROTKB|F1MSI1	372	STK17B "Uncharacterized protei	0.824	0.201	0.453	4e-14
UNIPROTKB|E2R573	372	STK17B "Uncharacterized protei	0.824	0.201	0.44	4e-14
UNIPROTKB|Q9GM70	397	STK17A "Serine/threonine-prote	0.725	0.166	0.469	1.7e-13
MGI|MGI:2138162	372	Stk17b "serine/threonine kinas	0.824	0.201	0.453	2.4e-13

UNIPROTKB|Q5ZM34 STK17B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 193 (73.0 bits), Expect = 8.6e-15, P = 8.6e-15
 Identities = 36/72 (50%), Positives = 52/72 (72%)

Query:     7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQ 66
             +K    G+   VR+C  +  G +YAAKFL+K+RR  D KAEILHE+AVLE  + N RIV 
Sbjct:    36 SKELGRGRCGVVRKCIAKSTGQEYAAKFLKKRRRGQDCKAEILHEIAVLELTKSNPRIVN 95

Query:    67 LHQVFESSHDMI 78
             LH+V+E+++++I
Sbjct:    96 LHEVYETANEII 107

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0006917 "induction of apoptosis" evidence=ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

UNIPROTKB|O94768 STK17B "Serine/threonine-protein kinase 17B" [Homo sapiens (taxid:9606)]

 Score = 191 (72.3 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 34/72 (47%), Positives = 52/72 (72%)

Query:     7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQ 66
             +K    GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +   R++ 
Sbjct:    36 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 95

Query:    67 LHQVFESSHDMI 78
             LH+V+E++ ++I
Sbjct:    96 LHEVYENTSEII 107

GO:0006915 "apoptotic process" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=ISS

GO:0004672 "protein kinase activity" evidence=ISS

RGD|620457 Stk17b "serine/threonine kinase 17b" [Rattus norvegicus (taxid:10116)]

 Score = 188 (71.2 bits), Expect = 3.1e-14, P = 3.1e-14
 Identities = 35/75 (46%), Positives = 51/75 (68%)

Query:     4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR 63
             T   K    GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  R    
Sbjct:    33 TLTPKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELARSCPH 92

Query:    64 IVQLHQVFESSHDMI 78
             ++ LH+V+E++ ++I
Sbjct:    93 VINLHEVYETATEII 107

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;ISS;IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO;ISS;IDA

GO:0005634 "nucleus" evidence=ISO;ISS;IDA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;ISS;IDA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=ISO;ISS;IMP

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;ISS;IDA

GO:0012501 "programmed cell death" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

UNIPROTKB|Q91XS8 Stk17b "Serine/threonine-protein kinase 17B" [Rattus norvegicus (taxid:10116)]

 Score = 188 (71.2 bits), Expect = 3.1e-14, P = 3.1e-14
 Identities = 35/75 (46%), Positives = 51/75 (68%)

Query:     4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR 63
             T   K    GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  R    
Sbjct:    33 TLTPKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELARSCPH 92

Query:    64 IVQLHQVFESSHDMI 78
             ++ LH+V+E++ ++I
Sbjct:    93 VINLHEVYETATEII 107

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1SN17 STK17B "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 188 (71.2 bits), Expect = 3.1e-14, P = 3.1e-14
 Identities = 34/75 (45%), Positives = 52/75 (69%)

Query:     4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR 63
             T  +K    GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +    
Sbjct:    33 TLTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPH 92

Query:    64 IVQLHQVFESSHDMI 78
             ++ LH+V+E++ ++I
Sbjct:    93 VINLHEVYENASEII 107

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

ZFIN|ZDB-GENE-040426-1499 stk17b "serine/threonine kinase 17b (apoptosis-inducing)" [Danio rerio (taxid:7955)]

 Score = 187 (70.9 bits), Expect = 3.4e-14, P = 3.4e-14
 Identities = 32/73 (43%), Positives = 53/73 (72%)

Query:     6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV 65
             I K    GK+A V+RC ++  G  +AAKF++K+RR  D +A+++HE+AVLEA + N R+V
Sbjct:    34 IGKELGRGKFAVVKRCVEKTTGKVFAAKFIKKRRRGRDCRADVIHEIAVLEAAKNNPRVV 93

Query:    66 QLHQVFESSHDMI 78
              L+ V+E+ +D++
Sbjct:    94 NLNAVYETDYDLV 106

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

UNIPROTKB|F1MSI1 STK17B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 187 (70.9 bits), Expect = 4.0e-14, P = 4.0e-14
 Identities = 34/75 (45%), Positives = 52/75 (69%)

Query:     4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR 63
             T  +K    GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +    
Sbjct:    33 TLTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELTKSCPH 92

Query:    64 IVQLHQVFESSHDMI 78
             ++ LH+V+E++ ++I
Sbjct:    93 VINLHEVYENTSEII 107

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R573 STK17B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 187 (70.9 bits), Expect = 4.0e-14, P = 4.0e-14
 Identities = 33/75 (44%), Positives = 52/75 (69%)

Query:     4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR 63
             T  +K    GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+A+LE  +    
Sbjct:    33 TLTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAILELAKSCPH 92

Query:    64 IVQLHQVFESSHDMI 78
             ++ LH+V+E++ ++I
Sbjct:    93 VINLHEVYENTSEII 107

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q9GM70 STK17A "Serine/threonine-protein kinase 17A" [Oryctolagus cuniculus (taxid:9986)]

 Score = 182 (69.1 bits), Expect = 1.7e-13, P = 1.7e-13
 Identities = 31/66 (46%), Positives = 50/66 (75%)

Query:    13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
             GK+A VR+C  + +G ++AAKF+RK+R+  D + EI+HE+AVLE  + N  ++ LH+V+E
Sbjct:    53 GKFAVVRKCIQKDSGKEFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVYE 112

Query:    73 SSHDMI 78
             +S +MI
Sbjct:   113 TSSEMI 118

GO:0005524 "ATP binding" evidence=ISS

GO:0006917 "induction of apoptosis" evidence=IMP

GO:0007243 "intracellular protein kinase cascade" evidence=ISS;IDA

GO:0043065 "positive regulation of apoptotic process" evidence=ISS

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=ISS

MGI|MGI:2138162 Stk17b "serine/threonine kinase 17b (apoptosis-inducing)" [Mus musculus (taxid:10090)]

 Score = 180 (68.4 bits), Expect = 2.4e-13, P = 2.4e-13
 Identities = 34/75 (45%), Positives = 50/75 (66%)

Query:     4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR 63
             T   K    GK+A VR+C  +  G +YAAK L+K+RR  D +AEILHE+AVLE  R    
Sbjct:    33 TLTPKELGRGKFAVVRQCISKSTGQEYAAKSLKKRRRGQDCRAEILHEIAVLELARSCPH 92

Query:    64 IVQLHQVFESSHDMI 78
             ++ LH+V+E++ ++I
Sbjct:    93 VINLHEVYENATEII 107

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0006915 "apoptotic process" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=ISO

GO:0007243 "intracellular protein kinase cascade" evidence=ISO

GO:0012501 "programmed cell death" evidence=ISO

GO:0015629 "actin cytoskeleton" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	91
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	9e-13
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	8e-06
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	6e-05
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	7e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	7e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	0.001
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	0.001
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	0.001
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.002
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	0.002
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	0.003
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	0.003
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.003
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 61.0 bits (149), Expect = 9e-13
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  V   RD+K G   A K ++KK+   D +  IL E+ +L+  +    IV+L+ VFE
Sbjct: 10 GSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRER-ILREIKILKKLKHP-NIVRLYDVFE 67

Query: 73 SSHDMILLLELLD 85
              + L++E  +
Sbjct: 68 DEDKLYLVMEYCE 80

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G + TV   RD+K G + A K ++K+  S+ L+ E+L E+ +L+    +  IV+L+ VFE
Sbjct: 4  GGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLE-ELLREIEILKKLN-HPNIVKLYGVFE 61

Query: 73 SSHDMILLLELLD 85
            + + L++E  +
Sbjct: 62 DENHLYLVMEYCE 74

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 51.5 bits (124), Expect = 3e-09
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G + TV + + +  G   A K L+K+   +        E+ +L        IV+L   FE
Sbjct: 10 GSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSH-PNIVRLIDAFE 68

Query: 73 SSHDMILLLELLD 85
              + L++E  +
Sbjct: 69 DKDHLYLVMEYCE 81

Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 42.4 bits (98), Expect = 5e-06
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 5  KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE-ILHEVAVLEACRCNSR 63
          +I +    G +  V   RDRK     A K L KK  S   + E  L E+ +L +      
Sbjct: 3  RILRKLGEGSFGEVYLARDRK---LVALKVLAKKLESKSKEVERFLREIQILASLNHPPN 59

Query: 64 IVQLHQVFESSHDMILLLELLD 85
          IV+L+  F+    + L++E +D
Sbjct: 60 IVKLYDFFQDEGSLYLVMEYVD 81

Length = 384

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 41.9 bits (99), Expect = 8e-06
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQV-F 71
          G ++ V + + RK G  YA K ++K  +S + +   L E+  L     +  I++L +V F
Sbjct: 10 GTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLF 68

Query: 72 ESSHD-MILLLELLDLN 87
          +     + L+ EL+D+N
Sbjct: 69 DRKTGRLALVFELMDMN 85

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE--ILHEVAVLEACRCNSRIVQLHQV 70
          G ++TV   ++++   +YA K L  KR+    K    +  E  VL     +  I++L+  
Sbjct: 12 GSFSTVVLAKEKETNKEYAIKIL-DKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYT 70

Query: 71 FESSHDMILLLELLD 85
          F+   ++  +LE   
Sbjct: 71 FQDEENLYFVLEYAP 85

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V +CR++  G   A K  ++     D+K   L EV VL   R +  IV L + F 
Sbjct: 12 GAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR-HENIVNLKEAFR 70

Query: 73 SSHDMILLLELLDLNHHQ 90
              + L+ E ++    +
Sbjct: 71 RKGRLYLVFEYVERTLLE 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 39.4 bits (93), Expect = 6e-05
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 12 LGK--YATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          LGK  +  V   R +  G  YA K L+KK+          L E  +L        IV+LH
Sbjct: 1  LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH-PFIVKLH 59

Query: 69 QVFESSHDMILLLELL---DLNHH 89
            F++   + L+LE     +L  H
Sbjct: 60 YAFQTEEKLYLVLEYAPGGELFSH 83

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 7e-05
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V + RD+  G   A K ++ +  S  +    L E+ +L+    +  I++L  VF 
Sbjct: 10 GTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN-HPNIIKLLDVFR 68

Query: 73 SSHDMILLLELLDLN 87
             D+ L+ E +D +
Sbjct: 69 HKGDLYLVFEFMDTD 83

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 11/84 (13%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRK----KRRSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G +  V   + R     +A K++ K    ++ S      +L+E  +L+    +  +V L 
Sbjct: 11 GAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSV---RNVLNERRILQELN-HPFLVNLW 66

Query: 69 QVFESSHDMILLLELL---DLNHH 89
            F+   +M L+++LL   DL +H
Sbjct: 67 YSFQDEENMYLVVDLLLGGDLRYH 90

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 36.4 bits (84), Expect = 7e-04
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 11/84 (13%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA---CRCNSR-IVQLH 68
          G +  V  C+ R  G  YA K L KKR    LK    +E A++E     + +SR IV L 
Sbjct: 4  GGFGEVSACQMRATGKLYACKKLNKKR----LKKRKGYEGAMVEKRILAKVHSRFIVSLA 59

Query: 69 QVFESSHDMILLLELL---DLNHH 89
            F++  D+ L++ ++   DL +H
Sbjct: 60 YAFQTKTDLCLVMTIMNGGDLRYH 83

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V R RD  +G   A K +R       +    L E+ +L   R +  IV+L +V  
Sbjct: 18 GTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR-HPNIVELKEVVV 76

Query: 73 SSH-DMILL 80
            H D I L
Sbjct: 77 GKHLDSIFL 85

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSR-IVQLHQV 70
          G +  V  C+ R  G  YA K L KKR +    ++  L+E  +LE  + NSR +V L   
Sbjct: 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILE--KVNSRFVVSLAYA 68

Query: 71 FESSHDMILLLELL---DLNHH 89
          +E+   + L+L L+   DL  H
Sbjct: 69 YETKDALCLVLTLMNGGDLKFH 90

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 35.3 bits (82), Expect = 0.001
 Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G    V + R +  G  YA K +         K ++L E+  L +C     +V+ +  F 
Sbjct: 12 GSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRK-QLLRELKTLRSCESPY-VVKCYGAFY 69

Query: 73 SSHDMILLLELLDL 86
             ++ ++LE +D 
Sbjct: 70 KEGEISIVLEYMDG 83

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA--EILHEVAVLEACRCNSRIVQLHQV 70
          GK   VR+      G  YA K L+K       K       E  VLEA R    +V LH  
Sbjct: 14 GKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYA 73

Query: 71 FESSHDMILLLE 82
          F++   + L+L+
Sbjct: 74 FQTDTKLHLILD 85

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 34.9 bits (81), Expect = 0.002
 Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y +V +   ++ G   A K +  +    ++  EI    ++L+ C     IV+ +  + 
Sbjct: 14 GSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEI----SILKQCDSPY-IVKYYGSYF 68

Query: 73 SSHDMILLLE 82
           + D+ +++E
Sbjct: 69 KNTDLWIVME 78

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE-ILHEVAVLEACRCNSRIVQLHQVF 71
          G YA V   R +KN   YA K ++K+    D   + +  E  V E    N  +V LH  F
Sbjct: 6  GSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF 65

Query: 72 ESSHDMILLLELLD 85
          +++  + L++E ++
Sbjct: 66 QTTSRLFLVIEYVN 79

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 34.4 bits (80), Expect = 0.003
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTD--LKAEILHEVAVLEACRCNSRIVQLHQV 70
          G + +V   R+++ G   A K ++KK  S +  +    L EV  L     +  IV+L +V
Sbjct: 10 GTFGSVYLARNKETGELVAIKKMKKKFYSWEECMN---LREVKSLRKLNEHPNIVKLKEV 66

Query: 71 FESSHDMILLLELLDLNHHQ 90
          F  + ++  + E ++ N +Q
Sbjct: 67 FRENDELYFVFEYMEGNLYQ 86

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 34.1 bits (79), Expect = 0.003
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +  V   + +     +A K ++K+    T  +  I  E  +LE C     IV+L++ F
Sbjct: 4  GGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPF-IVKLYRTF 62

Query: 72 ESSHDMILLLEL 83
          +    + +L+E 
Sbjct: 63 KDKKYIYMLMEY 74

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 34.0 bits (78), Expect = 0.004
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V + RDR      A K +R ++    + +  + E+++L+  + +  IV+L  V  
Sbjct: 13 GTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRLQDVVH 71

Query: 73 SSHDMILLLELLDLN 87
          S   + L+ E LDL+
Sbjct: 72 SEKRLYLVFEYLDLD 86

Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	91
KOG0595|consensus	429		99.92
KOG0615|consensus	475		99.88
KOG0605|consensus	550		99.85
KOG0575|consensus	592		99.83
KOG0598|consensus	357		99.82
KOG0032|consensus	382		99.81
KOG0597|consensus	808		99.81
KOG0616|consensus	355		99.8
KOG0580|consensus	281		99.8
KOG0600|consensus	560		99.79
KOG0694|consensus	694		99.79
KOG0583|consensus	370		99.78
KOG0611|consensus	668		99.78
KOG0610|consensus	459		99.78
KOG0586|consensus	596		99.78
KOG0659|consensus	318		99.77
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.77
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.76
KOG0592|consensus	604		99.76
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.76
KOG0591|consensus	375		99.76
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.76
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.76
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.76
KOG0194|consensus	474		99.76
KOG0589|consensus	426		99.75
KOG0593|consensus	396		99.75
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.75
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.74
KOG0690|consensus	516		99.73
KOG0581|consensus	364		99.73
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.73
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.73
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.73
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.73
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.72
KOG0661|consensus	538		99.72
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.72
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.72
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.72
KOG1187|consensus	361		99.72
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.72
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.72
KOG0588|consensus	786		99.72
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.71
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.71
KOG0585|consensus	576		99.71
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.71
KOG0033|consensus	355		99.71
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.71
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.71
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.71
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.71
KOG0192|consensus	362		99.7
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.7
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.7
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.7
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.7
KOG1026|consensus	774		99.69
KOG0197|consensus	468		99.69
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.69
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.69
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.69
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.69
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.68
KOG4717|consensus	864		99.68
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.68
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.68
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.68
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.68
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.68
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.67
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.67
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.67
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.67
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.67
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.67
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.67
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.67
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.67
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.66
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.66
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.66
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.66
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.66
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.66
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.66
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.66
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.66
KOG0662|consensus	292		99.66
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.65
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.65
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.65
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.65
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.65
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.65
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.65
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.65
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.65
KOG0663|consensus	419		99.65
KOG0582|consensus	516		99.65
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.64
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.64
KOG0612|consensus	1317		99.64
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.64
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.64
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.64
KOG4250|consensus	732		99.64
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.64
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.64
PLN00009	294	cyclin-dependent kinase A; Provisional	99.63
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.63
PTZ00267	478	NIMA-related protein kinase; Provisional	99.63
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.63
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.63
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.63
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.63
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.63
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.63
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.63
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.63
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.63
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.63
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.63
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.63
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.63
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.63
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.63
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.63
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.62
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.62
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.62
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.62
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.62
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.62
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.62
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.62
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.62
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.62
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.62
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.62
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.62
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.62
KOG1094|consensus	807		99.62
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.62
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.62
KOG0578|consensus	550		99.62
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.62
KOG0607|consensus	463		99.62
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.62
KOG0201|consensus	467		99.61
KOG4236|consensus	888		99.61
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.61
PTZ00283	496	serine/threonine protein kinase; Provisional	99.61
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.61
KOG0198|consensus	313		99.61
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.61
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.6
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.6
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.6
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.6
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.6
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.6
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.6
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.6
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.6
KOG1095|consensus	1025		99.6
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.6
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.6
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.6
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.6
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.6
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.6
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.6
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.59
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.59
KOG0594|consensus	323		99.59
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.59
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.59
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.59
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.59
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.59
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.59
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.59
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.59
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.58
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.58
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.58
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.58
KOG0196|consensus	996		99.58
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.58
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.58
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.58
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.58
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.58
PRK09188	365	serine/threonine protein kinase; Provisional	99.58
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.57
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.57
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.57
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.57
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.57
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.57
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.57
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.57
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.57
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.56
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.56
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.56
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.56
KOG1989|consensus	738		99.56
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.56
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.56
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.56
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.56
PHA03212	391	serine/threonine kinase US3; Provisional	99.56
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.56
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.56
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.56
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.55
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.55
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.55
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.55
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.55
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.55
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.55
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.55
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.55
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.55
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.55
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.55
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.55
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.55
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.55
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.55
KOG0199|consensus	1039		99.54
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.54
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.54
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.54
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.54
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.54
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.54
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.54
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.54
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.54
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.53
KOG0608|consensus	1034		99.53
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.53
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.53
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.53
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.53
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.52
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.52
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.52
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.52
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.52
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.52
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.52
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.52
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.51
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.51
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.51
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.51
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.51
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.51
KOG4278|consensus	1157		99.51
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.51
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.51
PTZ00036	440	glycogen synthase kinase; Provisional	99.51
KOG0660|consensus	359		99.51
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.51
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.51
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.5
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.5
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.5
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.5
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.5
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.5
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.5
KOG0599|consensus	411		99.5
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.5
KOG4279|consensus	1226		99.5
PHA02988	283	hypothetical protein; Provisional	99.5
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.5
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.5
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.49
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.49
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.49
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.49
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.49
KOG0587|consensus	953		99.49
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.49
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.49
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.49
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.49
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.48
KOG0576|consensus	829		99.48
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.48
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.48
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.48
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.47
KOG0574|consensus	502		99.47
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.47
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.47
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.47
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.47
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.46
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.46
KOG0695|consensus	593		99.46
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.46
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.46
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.46
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.45
KOG0696|consensus	683		99.45
KOG0577|consensus	948		99.45
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.45
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.45
KOG0667|consensus	586		99.45
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.44
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.44
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.44
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.44
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.44
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.44
KOG0193|consensus	678		99.44
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.43
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.43
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.43
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.43
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.43
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.43
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.43
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.43
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.43
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.42
KOG0584|consensus	632		99.42
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.42
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.42
PHA03209	357	serine/threonine kinase US3; Provisional	99.42
KOG0666|consensus	438		99.42
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.41
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.41
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.41
KOG4257|consensus	974		99.41
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.41
PHA03211	461	serine/threonine kinase US3; Provisional	99.41
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.41
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.41
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.4
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.4
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.4
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.39
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.39
KOG0579|consensus	1187		99.39
KOG2052|consensus	513		99.39
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.39
KOG1151|consensus	775		99.39
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.39
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.39
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.38
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.37
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.37
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.37
KOG0658|consensus	364		99.37
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.36
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.36
KOG1152|consensus	772		99.35
KOG0668|consensus	338		99.35
KOG4645|consensus	1509		99.35
KOG0986|consensus	591		99.34
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.34
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.33
KOG1035|consensus	1351		99.32
KOG4721|consensus	904		99.32
PHA03207	392	serine/threonine kinase US3; Provisional	99.32
KOG0200|consensus	609		99.3
PHA03210	501	serine/threonine kinase US3; Provisional	99.29
KOG0604|consensus	400		99.29
KOG2345|consensus	302		99.29
PRK10345	210	hypothetical protein; Provisional	99.29
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.28
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.26
KOG1025|consensus	1177		99.26
PTZ00284	467	protein kinase; Provisional	99.25
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.21
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.21
KOG1290|consensus	590		99.18
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.18
KOG1345|consensus	378		99.17
KOG1006|consensus	361		99.14
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.14
KOG3653|consensus	534		99.11
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.07
KOG1163|consensus	341		99.06
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.03
PRK14879	211	serine/threonine protein kinase; Provisional	99.03
smart00090	237	RIO RIO-like kinase.	99.03
KOG1167|consensus	418		99.02
KOG0614|consensus	732		99.02
KOG0596|consensus	677		99.0
KOG0603|consensus	612		98.98
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.9
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.88
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.87
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.85
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.82
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.78
KOG0983|consensus	391		98.78
KOG1165|consensus	449		98.75
PRK12274	218	serine/threonine protein kinase; Provisional	98.75
KOG0671|consensus	415		98.74
KOG0669|consensus	376		98.66
PHA02882	294	putative serine/threonine kinase; Provisional	98.63
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.61
KOG1164|consensus	322		98.58
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.57
KOG1027|consensus	903		98.54
KOG0670|consensus	752		98.54
KOG0984|consensus	282		98.48
KOG1166|consensus	974		98.43
KOG0195|consensus	448		98.34
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.3
KOG0664|consensus	449		98.29
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.09
KOG0665|consensus	369		98.02
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.01
KOG0603|consensus	612		97.97
KOG0601|consensus	524		97.37
KOG0590|consensus	601		97.33
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.27
PRK10593	297	hypothetical protein; Provisional	97.25
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.24
KOG1243|consensus	690		97.21
PLN02876	822	acyl-CoA dehydrogenase	97.16
KOG3741|consensus	655		97.12
KOG1024|consensus	563		96.74
KOG1235|consensus	538		96.71
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	96.69
PF01636	239	APH: Phosphotransferase enzyme family This family	96.57
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.5
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	96.48
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.42
KOG1033|consensus	516		96.41
KOG0590|consensus	601		96.31
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.26
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	95.77
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.44
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	95.25
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.1
KOG0601|consensus	524		94.69
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	94.15
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.81
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	93.57
KOG3087|consensus	229		92.96
KOG1023|consensus	484		92.58
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	91.72
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	90.46
PLN02756	418	S-methyl-5-thioribose kinase	90.4
KOG1240|consensus	1431		89.81
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	87.65
PRK12396	409	5-methylribose kinase; Reviewed	87.41
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	87.38
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	85.29
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	83.89
KOG0576|consensus	829		82.4
cd05124	238	AFK Actin-Fragmin Kinase (AFK); catalytic domain.	81.87
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	81.71

>KOG0595|consensus

Probab=99.92  E-value=1.5e-24  Score=119.90  Aligned_cols=88  Identities=24%  Similarity=0.388  Sum_probs=80.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||.|+|+.||++..+.++..+|+|.+.+........+.+..|+.+++.++ |||||.+.++..+++.+|+||
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEEEEE
Confidence            4788888999999999999999999999999999987665556667999999999999 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |||+||+|.
T Consensus        89 EyC~gGDLs   97 (429)
T KOG0595|consen   89 EYCNGGDLS   97 (429)
T ss_pred             EeCCCCCHH
Confidence            999999984

>KOG0615|consensus

Probab=99.88  E-value=3.5e-22  Score=111.08  Aligned_cols=89  Identities=20%  Similarity=0.350  Sum_probs=77.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-----HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-----LKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      +.|.+.+.+|+|+||.|..+..+.++..+|+|++.++.....     ....+.+|+++|+.++ ||+|+++++++..++.
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~-HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS-HPNIVRIKDFFEVPDS  250 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC-CCCEEEEeeeeecCCc
Confidence            457788999999999999999999999999999987643221     1123679999999999 8999999999999999


Q ss_pred             EEEEEeccCCCCCCC
Q psy8005          77 MILLLELLDLNHHQA   91 (91)
Q Consensus        77 ~~lv~e~~~~g~L~~   91 (91)
                      .||||||++||+|++
T Consensus       251 ~YmVlE~v~GGeLfd  265 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFD  265 (475)
T ss_pred             eEEEEEEecCccHHH
Confidence            999999999999874

>KOG0605|consensus

Probab=99.85  E-value=4.4e-21  Score=109.17  Aligned_cols=89  Identities=21%  Similarity=0.331  Sum_probs=79.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      .++|.+++.||+|+||.||.|..+.+|..+|+|.+.+..+. .....++..|-.+|.... .+++++|+..|++...+||
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~d-s~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVD-SPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcC-CCcEEEEEEEecCCCeeEE
Confidence            36899999999999999999999999999999999987543 345667999999999977 6999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+|||++.
T Consensus       219 iMEylPGGD~m  229 (550)
T KOG0605|consen  219 IMEYLPGGDMM  229 (550)
T ss_pred             EEEecCCccHH
Confidence            99999999863

>KOG0575|consensus

Probab=99.83  E-value=5.8e-20  Score=105.78  Aligned_cols=87  Identities=24%  Similarity=0.353  Sum_probs=79.1

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .|...+.||+|+|+.||.+.+..+|..+|+|.+++... ....++.+.+|+++.+.++ ||||++++.+|++++.+|++.
T Consensus        19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEEE
Confidence            38889999999999999999999999999999998654 3445777999999999999 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |+|+.++|.
T Consensus        98 ELC~~~sL~  106 (592)
T KOG0575|consen   98 ELCHRGSLM  106 (592)
T ss_pred             EecCCccHH
Confidence            999999874

>KOG0598|consensus

Probab=99.82  E-value=4.2e-20  Score=101.29  Aligned_cols=88  Identities=24%  Similarity=0.327  Sum_probs=79.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|++.+.||+|+||+|+.+....++..+|+|++++...-. ....+..+|..++..+. ||.|+++...|++...+|+|
T Consensus        25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCeEEEE
Confidence            57899999999999999999999999999999999875432 34556899999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +||++||+|+
T Consensus       104 ld~~~GGeLf  113 (357)
T KOG0598|consen  104 LDYLNGGELF  113 (357)
T ss_pred             EeccCCccHH
Confidence            9999999986

>KOG0032|consensus

Probab=99.81  E-value=2.1e-19  Score=101.09  Aligned_cols=90  Identities=23%  Similarity=0.425  Sum_probs=80.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +.|.+.+.||.|.||.|+.|....+|..+|+|.+.+...... ....+.+|+.+++.++.|||++.+.+.+++...+++|
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv  114 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV  114 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence            358888999999999999999999999999999988765332 3456999999999999889999999999999999999


Q ss_pred             EeccCCCCCCC
Q psy8005          81 LELLDLNHHQA   91 (91)
Q Consensus        81 ~e~~~~g~L~~   91 (91)
                      ||+|.||+|++
T Consensus       115 mEL~~GGeLfd  125 (382)
T KOG0032|consen  115 MELCEGGELFD  125 (382)
T ss_pred             EEecCCchHHH
Confidence            99999999864

>KOG0597|consensus

Probab=99.81  E-value=2.5e-20  Score=107.67  Aligned_cols=88  Identities=20%  Similarity=0.264  Sum_probs=80.1

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+.+.||+|+||.||+|..+.+...+|+|.+++.......-..+.+|+++++.+. ||||+.++++|++...+|+|
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vV   79 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVV   79 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEE
Confidence            89999999999999999999999999999999999987765555567999999999999 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      .||+.| +|+
T Consensus        80 te~a~g-~L~   88 (808)
T KOG0597|consen   80 TEYAVG-DLF   88 (808)
T ss_pred             ehhhhh-hHH
Confidence            999977 553

>KOG0616|consensus

Probab=99.80  E-value=1.7e-19  Score=97.20  Aligned_cols=90  Identities=20%  Similarity=0.328  Sum_probs=80.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEecccc-CchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|+..+.+|.|+||.|.......++..+|+|.+++.. ......++..+|..+++.+. ||.++++.+.+.+...+||
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lym  121 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYM  121 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEE
Confidence            468899999999999999999999999999999998754 33445667899999999999 8999999999999999999


Q ss_pred             EEeccCCCCCCC
Q psy8005          80 LLELLDLNHHQA   91 (91)
Q Consensus        80 v~e~~~~g~L~~   91 (91)
                      ||||++||+|++
T Consensus       122 vmeyv~GGElFS  133 (355)
T KOG0616|consen  122 VMEYVPGGELFS  133 (355)
T ss_pred             EEeccCCccHHH
Confidence            999999999874

>KOG0580|consensus

Probab=99.80  E-value=2.2e-20  Score=98.07  Aligned_cols=89  Identities=21%  Similarity=0.273  Sum_probs=78.8

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhH-HHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+++.||.|.||.||.+....++--+|+|++.+....... ...+.+|+++...+. ||||+++++.|.+...+|+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhheeccceeEE
Confidence            46899999999999999999999988889999999887543332 345899999999999 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++||.+.|+++
T Consensus       100 ilEya~~gel~  110 (281)
T KOG0580|consen  100 ILEYAPRGELY  110 (281)
T ss_pred             EEEecCCchHH
Confidence            99999999875

>KOG0600|consensus

Probab=99.79  E-value=3.3e-19  Score=101.33  Aligned_cols=85  Identities=20%  Similarity=0.342  Sum_probs=75.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--CeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~~~l   79 (91)
                      +.|..++.||+|.||.||++.+..++..||+|.+........+..-..+|+.+|+.++ ||||++|.+.....  ..+||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD-HPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC-CCcccceeeEEEecCCceEEE
Confidence            4677789999999999999999999999999999877665666777899999999999 89999999987665  68999


Q ss_pred             EEeccCCC
Q psy8005          80 LLELLDLN   87 (91)
Q Consensus        80 v~e~~~~g   87 (91)
                      |+|||+..
T Consensus       196 VFeYMdhD  203 (560)
T KOG0600|consen  196 VFEYMDHD  203 (560)
T ss_pred             EEecccch
Confidence            99999753

>KOG0694|consensus

Probab=99.79  E-value=1.6e-18  Score=101.24  Aligned_cols=90  Identities=16%  Similarity=0.262  Sum_probs=79.8

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||+|..+....++..+|+|.+++... ..+..+....|-.++.-.+.||.+++++.+|++.+.+|+
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f  446 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF  446 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence            4789999999999999999999999999999999998653 445566688888888887779999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+.||++.
T Consensus       447 vmey~~Ggdm~  457 (694)
T KOG0694|consen  447 VMEYVAGGDLM  457 (694)
T ss_pred             EEEecCCCcEE
Confidence            99999999853

>KOG0583|consensus

Probab=99.78  E-value=1.8e-18  Score=97.21  Aligned_cols=90  Identities=20%  Similarity=0.375  Sum_probs=76.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc---hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ..|.+.+.||+|+||+|+.+.+..++..+|+|.+++....   ....+.+.+|+.+++.+.+||||+++++++.+...++
T Consensus        17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~   96 (370)
T KOG0583|consen   17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY   96 (370)
T ss_pred             CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence            3688999999999999999999999999999988765221   1223456789999999997899999999999999999


Q ss_pred             EEEeccCCCCCCC
Q psy8005          79 LLLELLDLNHHQA   91 (91)
Q Consensus        79 lv~e~~~~g~L~~   91 (91)
                      +||||+.+|+|++
T Consensus        97 ivmEy~~gGdL~~  109 (370)
T KOG0583|consen   97 IVMEYCSGGDLFD  109 (370)
T ss_pred             EEEEecCCccHHH
Confidence            9999999998863

>KOG0611|consensus

Probab=99.78  E-value=1.4e-19  Score=101.69  Aligned_cols=88  Identities=22%  Similarity=0.403  Sum_probs=78.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhH-HHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .|.+.+.+|+|.||+|.++.....|+.+|+|.+.+....... --+..+|++++..++ ||||+.+++.|+..+.+.+||
T Consensus        54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN-HPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN-HPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC-CCceeehhhhhcCCceEEEEE
Confidence            577889999999999999999889999999999987665432 235889999999999 899999999999999999999


Q ss_pred             eccCCCCCCC
Q psy8005          82 ELLDLNHHQA   91 (91)
Q Consensus        82 e~~~~g~L~~   91 (91)
                      ||..+|+|++
T Consensus       133 EYaS~GeLYD  142 (668)
T KOG0611|consen  133 EYASGGELYD  142 (668)
T ss_pred             EecCCccHHH
Confidence            9999999874

>KOG0610|consensus

Probab=99.78  E-value=5.2e-19  Score=98.64  Aligned_cols=88  Identities=17%  Similarity=0.154  Sum_probs=77.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|++.+.||.|..|.||.+....++..+|+|++++...... ...+...|-++|+.++ ||.++.|+..++++...+++
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~~cl~  155 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD-HPFLPTLYASFETDKYSCLV  155 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC-CCccchhhheeeccceeEEE
Confidence            467888999999999999999999889999999998765432 2334778889999999 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||||+||+|+
T Consensus       156 meyCpGGdL~  165 (459)
T KOG0610|consen  156 MEYCPGGDLH  165 (459)
T ss_pred             EecCCCccHH
Confidence            9999999985

>KOG0586|consensus

Probab=99.78  E-value=2.7e-18  Score=99.11  Aligned_cols=88  Identities=23%  Similarity=0.322  Sum_probs=81.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|.+.+.||+|.|++|..+.+..++..+|+|.+++........+.+.+|+.++..++ ||||+++++..++...+|+|||
T Consensus        57 ~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~lylV~e  135 (596)
T KOG0586|consen   57 LYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN-HPNIVKLFSVIETEATLYLVME  135 (596)
T ss_pred             ceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC-CcceeeeeeeeeecceeEEEEE
Confidence            578899999999999999999999999999999998776666677999999999999 8999999999999999999999


Q ss_pred             ccCCCCCCC
Q psy8005          83 LLDLNHHQA   91 (91)
Q Consensus        83 ~~~~g~L~~   91 (91)
                      |+.+|++++
T Consensus       136 ya~~ge~~~  144 (596)
T KOG0586|consen  136 YASGGELFD  144 (596)
T ss_pred             eccCchhHH
Confidence            999998763

>KOG0659|consensus

Probab=99.77  E-value=2.7e-18  Score=91.56  Aligned_cols=85  Identities=21%  Similarity=0.394  Sum_probs=76.3

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++.|...+.+|+|.||.||++.+..+++.+|+|.+......+.......+|+..++.+. |+||+.+.++|.....+.+|
T Consensus         1 ~~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV   79 (318)
T KOG0659|consen    1 MDRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV   79 (318)
T ss_pred             CchhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence            46788899999999999999999999999999999887655555556899999999999 89999999999988999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      +||++.
T Consensus        80 fEfm~t   85 (318)
T KOG0659|consen   80 FEFMPT   85 (318)
T ss_pred             EEeccc
Confidence            999974

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.77  E-value=7.6e-18  Score=95.03  Aligned_cols=88  Identities=19%  Similarity=0.258  Sum_probs=75.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +.|..++.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.++..+. |+|++++++.+...+..+++
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~~~lv   79 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFV   79 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC-CCCeeeeEEEEecCCEEEEE
Confidence            468899999999999999999999999999999976432 2223445888999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~E~~~gg~L~   89 (381)
T cd05626          80 MDYIPGGDMM   89 (381)
T ss_pred             EecCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=7.1e-18  Score=94.98  Aligned_cols=88  Identities=24%  Similarity=0.308  Sum_probs=75.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.+... .......+.+|+.++..++ |||++++++.+......|++
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv   79 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLI   79 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEE
Confidence            579999999999999999999998999999999865422 1222345788999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~E~~~gg~L~   89 (377)
T cd05629          80 MEFLPGGDLM   89 (377)
T ss_pred             EeCCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0592|consensus

Probab=99.76  E-value=6.2e-19  Score=100.98  Aligned_cols=89  Identities=24%  Similarity=0.293  Sum_probs=77.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhH-HHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+|.+++.||.|+|++|+++.+..++..||+|++.++..-... ..-+..|-.+|..+++||.+++|+..|++...+|+|
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv  152 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV  152 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence            4788999999999999999999999999999999886542211 122678888999997799999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +||+++|+|.
T Consensus       153 Le~A~nGdll  162 (604)
T KOG0592|consen  153 LEYAPNGDLL  162 (604)
T ss_pred             EEecCCCcHH
Confidence            9999999985

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=5.1e-18  Score=95.12  Aligned_cols=88  Identities=24%  Similarity=0.322  Sum_probs=75.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+|+|.+..... .......+.+|+.++..++ |+|++++++.+...+..+++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv   79 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLI   79 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEE
Confidence            579999999999999999999998899999999976432 1222345778999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~E~~~~g~L~   89 (364)
T cd05599          80 MEYLPGGDMM   89 (364)
T ss_pred             ECCCCCcHHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0591|consensus

Probab=99.76  E-value=2e-20  Score=100.49  Aligned_cols=88  Identities=18%  Similarity=0.279  Sum_probs=76.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeehe-eeeeCCe-EEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQ-VFESSHD-MIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~-~~l   79 (91)
                      .+|++.+.||.|+||.||++....++..+|.|.++-..+....++....|+.++++++ ||||+++++ .+..+.. +++
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN-HPNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC-CchHHHHHHHhhhccchhhHH
Confidence            4689999999999999999999999999999999866665666778999999999999 899999987 5555554 899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +||+|..|+|.
T Consensus        98 vmE~c~~GDLs  108 (375)
T KOG0591|consen   98 VMELCDAGDLS  108 (375)
T ss_pred             HHHhhcccCHH
Confidence            99999999873

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.76  E-value=7e-18  Score=93.62  Aligned_cols=89  Identities=19%  Similarity=0.313  Sum_probs=76.3

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||++.+..++..+++|.+...... ....+.+.+|+.++..++ |||++++++.+...+..++
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l   95 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDENRVYF   95 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEcCCEEEE
Confidence            46889999999999999999999888999999999754321 122345888999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        96 v~e~~~~~~L~  106 (329)
T PTZ00263         96 LLEFVVGGELF  106 (329)
T ss_pred             EEcCCCCChHH
Confidence            99999999874

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.76  E-value=9e-18  Score=94.52  Aligned_cols=88  Identities=19%  Similarity=0.265  Sum_probs=75.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++ |+|++++++.+...+.++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv   79 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFV   79 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCEEEEE
Confidence            4799999999999999999999988999999998654221 122345788999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~E~~~~g~L~   89 (376)
T cd05598          80 MDYIPGGDMM   89 (376)
T ss_pred             EeCCCCCcHH
Confidence            9999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.76  E-value=8.6e-18  Score=94.30  Aligned_cols=88  Identities=22%  Similarity=0.314  Sum_probs=75.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+|+|.+.+.... ......+..|+.++..++ |++++++++.+......+++
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~~~lv   79 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-SLWVVKMFYSFQDKLNLYLI   79 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCeEEEE
Confidence            5899999999999999999999888999999999764321 222345788999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~E~~~gg~L~   89 (363)
T cd05628          80 MEFLPGGDMM   89 (363)
T ss_pred             EcCCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0194|consensus

Probab=99.76  E-value=9.7e-18  Score=95.96  Aligned_cols=86  Identities=15%  Similarity=0.208  Sum_probs=71.0

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCc---E-EEEEEecccc-CchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGT---Q-YAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~---~-~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      -.+.+.||+|+||.|+.|.....+.   . ||+|...... .......++.+|..+++.++ ||||+++++......+++
T Consensus       159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~Pl~  237 (474)
T KOG0194|consen  159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEEPLM  237 (474)
T ss_pred             ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCccE
Confidence            3456899999999999998765422   3 7888887522 33445677999999999999 899999999999999999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++||+|+||+|.
T Consensus       238 ivmEl~~gGsL~  249 (474)
T KOG0194|consen  238 LVMELCNGGSLD  249 (474)
T ss_pred             EEEEecCCCcHH
Confidence            999999999985

>KOG0589|consensus

Probab=99.75  E-value=3.4e-18  Score=96.50  Aligned_cols=89  Identities=15%  Similarity=0.276  Sum_probs=80.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe-EEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-MIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~-~~l   79 (91)
                      |++|..++.+|+|+||.++...+...+..+++|.+.........+....+|+.++..+. ||||+.+.+.|..++. +++
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~I   81 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCI   81 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEE
Confidence            78999999999999999999988888889999999987766666667899999999988 8999999999998887 999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|+||+||+|.
T Consensus        82 vm~Y~eGg~l~   92 (426)
T KOG0589|consen   82 VMEYCEGGDLA   92 (426)
T ss_pred             EEeecCCCCHH
Confidence            99999999874

>KOG0593|consensus

Probab=99.75  E-value=3.5e-18  Score=92.76  Aligned_cols=86  Identities=23%  Similarity=0.376  Sum_probs=76.7

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |+.|.....+|+|+||.|++|.++.+|.-||+|..-.+.-.+....-.++|+..++++. |+|++.+.+.|.....+++|
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLV   79 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLV   79 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEE
Confidence            78999999999999999999999999999999998766543444555899999999999 89999999999999999999


Q ss_pred             EeccCCC
Q psy8005          81 LELLDLN   87 (91)
Q Consensus        81 ~e~~~~g   87 (91)
                      +|||+..
T Consensus        80 FE~~dhT   86 (396)
T KOG0593|consen   80 FEYCDHT   86 (396)
T ss_pred             eeecchH
Confidence            9999754

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.75  E-value=1.9e-17  Score=93.37  Aligned_cols=88  Identities=20%  Similarity=0.274  Sum_probs=75.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +.|...+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.+. |+|++++++.+...+..+++
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~~~lv   79 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFV   79 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCEEEEE
Confidence            368899999999999999999998899999999976432 1223445888999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~E~~~gg~L~   89 (382)
T cd05625          80 MDYIPGGDMM   89 (382)
T ss_pred             EeCCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=1.5e-17  Score=90.90  Aligned_cols=88  Identities=18%  Similarity=0.197  Sum_probs=75.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+...... ....+.+.+|+.+++.+. ||||+++++.+.+....+++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv   79 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYML   79 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC-CCcHhhhHhhhccCCeEEEE
Confidence            5789999999999999999999888999999998754221 122445788999999998 89999999999888999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~e~~~~~~L~   89 (291)
T cd05612          80 MEYVPGGELF   89 (291)
T ss_pred             EeCCCCCCHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0690|consensus

Probab=99.73  E-value=2.6e-18  Score=94.45  Aligned_cols=89  Identities=26%  Similarity=0.425  Sum_probs=79.6

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      |++|...+.+|+|.||+|..|..+.++..+|+|++.+... ..+...+.+.|..++++.. ||.+..+...|++.+.+++
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEEE
Confidence            7889999999999999999999999999999999988653 3344556778888999988 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||++||+|+
T Consensus       246 VMeyanGGeLf  256 (516)
T KOG0690|consen  246 VMEYANGGELF  256 (516)
T ss_pred             EEEEccCceEe
Confidence            99999999986

>KOG0581|consensus

Probab=99.73  E-value=3.6e-17  Score=90.06  Aligned_cols=86  Identities=23%  Similarity=0.365  Sum_probs=75.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-eEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-DMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-~~~lv~   81 (91)
                      +......||+|..|.|+++.++.++.-+|.|.+.... ......+..+|+++++..+ +|+|+..+++|..+. .++++|
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~-~~~~~~Qi~rEl~il~~~~-spyIV~~ygaF~~~~~~isI~m  157 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI-DPALQKQILRELEILRSCQ-SPYIVGFYGAFYSNGEEISICM  157 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC-CHHHHHHHHHHHHHHhhCC-CCCeeeEeEEEEeCCceEEeeh
Confidence            4566789999999999999999999999999994433 3445677999999999997 899999999999888 599999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |||++|+|.
T Consensus       158 EYMDgGSLd  166 (364)
T KOG0581|consen  158 EYMDGGSLD  166 (364)
T ss_pred             hhcCCCCHH
Confidence            999999985

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=4.3e-17  Score=90.52  Aligned_cols=88  Identities=18%  Similarity=0.246  Sum_probs=75.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+|.+.+.||+|+||.||++.+..++..+|+|.+...... ......+..|+.++..+. |||++++++.+...+..+++
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv   79 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLA   79 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEE
Confidence            3689999999999999999999888999999999764321 122445788999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus        80 ~e~~~g~~L~   89 (333)
T cd05600          80 MEYVPGGDFR   89 (333)
T ss_pred             EeCCCCCCHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.73  E-value=8.3e-17  Score=89.51  Aligned_cols=87  Identities=18%  Similarity=0.294  Sum_probs=76.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+++|.+.... .......+.+|+.+++.++ |+||+++++.+...+..+++|
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCC-CCcccceeEEEEECCEEEEEE
Confidence            67999999999999999999998888899999886543 2233456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        83 e~~~~~~L~   91 (333)
T cd06650          83 EHMDGGSLD   91 (333)
T ss_pred             ecCCCCcHH
Confidence            999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=5.4e-17  Score=90.19  Aligned_cols=88  Identities=22%  Similarity=0.250  Sum_probs=74.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||.+....++..+|+|.+.+... .......+..|..++..+. |+|++++++.+...+..+++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv   79 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD-RRWITNLHYAFQDENNLYLV   79 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCceEEEEecCCeEEEE
Confidence            579999999999999999999988899999999975321 1222344778888888887 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~e~~~g~~L~   89 (331)
T cd05597          80 MDYYVGGDLL   89 (331)
T ss_pred             EecCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.73  E-value=4.6e-17  Score=92.49  Aligned_cols=88  Identities=15%  Similarity=0.138  Sum_probs=71.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-----CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      +.|.+.+.||+|+||.||++.+...     +..+|+|.+..... ....+.+.+|+.++..+..||||+++++.+...+.
T Consensus        37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~  115 (400)
T cd05105          37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP  115 (400)
T ss_pred             cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence            3567789999999999999986432     34699999865432 23345688999999999668999999999998889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus       116 ~~lv~Ey~~~g~L~  129 (400)
T cd05105         116 IYIITEYCFYGDLV  129 (400)
T ss_pred             eEEEEEecCCCcHH
Confidence            99999999999884

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.72  E-value=6.7e-17  Score=90.64  Aligned_cols=88  Identities=23%  Similarity=0.344  Sum_probs=75.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||.+....++..+|+|.+..... .......+..|+.++..++ |++++++++.+...+..+++
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv   79 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD-GAWVVKMFYSFQDKRNLYLI   79 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence            578999999999999999999998899999999975422 1223445778999999998 79999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~E~~~gg~L~   89 (360)
T cd05627          80 MEFLPGGDMM   89 (360)
T ss_pred             EeCCCCccHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0661|consensus

Probab=99.72  E-value=1.2e-18  Score=98.57  Aligned_cols=85  Identities=20%  Similarity=0.294  Sum_probs=73.2

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-eEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-DMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-~~~l   79 (91)
                      |++|.+++.+|.|.||.||++....++..||+|.+.+.-. ...-..-++|+..++.++.||||+++++.+.+++ .+++
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            6789999999999999999999999999999999976532 2212236889999999998899999999998888 8999


Q ss_pred             EEeccCC
Q psy8005          80 LLELLDL   86 (91)
Q Consensus        80 v~e~~~~   86 (91)
                      |||||+.
T Consensus        88 VfE~Md~   94 (538)
T KOG0661|consen   88 VFEFMDC   94 (538)
T ss_pred             eHHhhhh
Confidence            9999864

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.72  E-value=1.6e-16  Score=88.32  Aligned_cols=88  Identities=20%  Similarity=0.194  Sum_probs=74.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++....++..+|+|.+.+... .......+..+..++..+. |++++++++.+...+..|++
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv   79 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENYLYLV   79 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence            579999999999999999999988889999999875321 1222334777888888887 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~Ey~~gg~L~   89 (331)
T cd05624          80 MDYYVGGDLL   89 (331)
T ss_pred             EeCCCCCcHH
Confidence            9999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.72  E-value=2.4e-16  Score=87.59  Aligned_cols=87  Identities=18%  Similarity=0.311  Sum_probs=76.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+++|.+.... .......+.+|+.+++.++ |||++++++.+...+..+++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~   82 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICM   82 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEEe
Confidence            68999999999999999999999889999999987542 2333556889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        83 e~~~~~~L~   91 (331)
T cd06649          83 EHMDGGSLD   91 (331)
T ss_pred             ecCCCCcHH
Confidence            999999874

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.72  E-value=1e-16  Score=87.28  Aligned_cols=87  Identities=21%  Similarity=0.385  Sum_probs=74.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+............+.+|+.+++.+. |+|++++.+.+...+..+++|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~   79 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLK-QENIVELKEAFRRRGKLYLVF   79 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCC-CccccchhhhEecCCEEEEEE
Confidence            4789999999999999999999888899999998765433333455788999999998 899999999999999999999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      ||++++.+
T Consensus        80 e~~~~~~l   87 (287)
T cd07848          80 EYVEKNML   87 (287)
T ss_pred             ecCCCCHH
Confidence            99998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG1187|consensus

Probab=99.72  E-value=7e-17  Score=90.66  Aligned_cols=85  Identities=22%  Similarity=0.229  Sum_probs=70.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-eEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-DMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-~~~lv   80 (91)
                      ++|.....||+|+||.||+|.-.. +..+|||.+.......  ..+|.+|+.++..+. |||++++.+++.... ..+||
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~~~~LV  150 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLR-HPNLVKLLGYCLEGGEHRLLV  150 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCC-CcCcccEEEEEecCCceEEEE
Confidence            356667899999999999997654 4789999876654321  234999999999999 899999999998888 59999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +||+++|+|.
T Consensus       151 YEym~nGsL~  160 (361)
T KOG1187|consen  151 YEYMPNGSLE  160 (361)
T ss_pred             EEccCCCCHH
Confidence            9999999985

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.72  E-value=1.1e-16  Score=89.51  Aligned_cols=87  Identities=21%  Similarity=0.372  Sum_probs=74.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|...+.||+|+||.||++.+..++..+++|.+..... ......+.+|+.+++.++ |+||+++++.+...+..++++
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~  151 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQVLL  151 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCC-CCCcceeeeEeccCCeEEEEE
Confidence            457778899999999999999988899999999865432 233456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus       152 e~~~~~~L~  160 (353)
T PLN00034        152 EFMDGGSLE  160 (353)
T ss_pred             ecCCCCccc
Confidence            999999874

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.72  E-value=8.8e-17  Score=90.53  Aligned_cols=88  Identities=20%  Similarity=0.279  Sum_probs=74.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.+..... .....+..|+.+++.++ |||++++++.+...+..+++
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~~~lv  121 (370)
T cd05596          43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN-SEWIVQLHYAFQDDKYLYMV  121 (370)
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCEEEEE
Confidence            46889999999999999999998889999999997542211 12334678899999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       122 ~Ey~~gg~L~  131 (370)
T cd05596         122 MEYMPGGDLV  131 (370)
T ss_pred             EcCCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0588|consensus

Probab=99.72  E-value=1.7e-17  Score=97.18  Aligned_cols=88  Identities=22%  Similarity=0.315  Sum_probs=78.1

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEecccc-CchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      -|++++.||.|+-|.|..+.+..+|+.+|+|++.+.. .........-+|+.+|+-+. |||++++++.+++...+|++.
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc-CCCeeeeeeeeccCceEEEEE
Confidence            3688999999999999999999999999999998762 32333456889999999999 899999999999999999999


Q ss_pred             eccCCCCCCC
Q psy8005          82 ELLDLNHHQA   91 (91)
Q Consensus        82 e~~~~g~L~~   91 (91)
                      ||+++|+||+
T Consensus        92 Eyv~gGELFd  101 (786)
T KOG0588|consen   92 EYVPGGELFD  101 (786)
T ss_pred             EecCCchhHH
Confidence            9999999974

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.71  E-value=1e-16  Score=90.28  Aligned_cols=88  Identities=18%  Similarity=0.248  Sum_probs=74.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.+.... ......+..|+.+++.++ |||++++++.+......+++
T Consensus        43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~lv  121 (370)
T cd05621          43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFCAFQDDKYLYMV  121 (370)
T ss_pred             HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence            4688999999999999999999888999999998753221 122344778888999888 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       122 ~Ey~~gg~L~  131 (370)
T cd05621         122 MEYMPGGDLV  131 (370)
T ss_pred             EcCCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=6.6e-17  Score=90.17  Aligned_cols=88  Identities=24%  Similarity=0.336  Sum_probs=75.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+....... .....+..|+.++..+. |+|++++++.+...+..++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv   79 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD-SPWIVKLYYSFQDEEHLYLV   79 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC-CCCccchhhheecCCeEEEE
Confidence            47999999999999999999999889999999997643211 23445788999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus        80 ~e~~~~~~L~   89 (350)
T cd05573          80 MEYMPGGDLM   89 (350)
T ss_pred             EcCCCCCCHH
Confidence            9999998874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0585|consensus

Probab=99.71  E-value=1.3e-16  Score=90.79  Aligned_cols=89  Identities=25%  Similarity=0.406  Sum_probs=74.9

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch------------hHHHHHHHHHHHHHhcCCCCCeeeeh
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST------------DLKAEILHEVAVLEACRCNSRIVQLH   68 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~~l~   68 (91)
                      +++|.+++.||+|.||.|.++.+..++..||+|++++.....            ...+.+.+|+.+++.+. |+||++|.
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~-H~nVV~Li  174 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH-HPNVVKLI  174 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC-CcCeeEEE
Confidence            367899999999999999999999999999999998743210            11246899999999999 89999999


Q ss_pred             eeeeeC--CeEEEEEeccCCCCCC
Q psy8005          69 QVFESS--HDMILLLELLDLNHHQ   90 (91)
Q Consensus        69 ~~~~~~--~~~~lv~e~~~~g~L~   90 (91)
                      ++..++  +.+|||+|||..|++.
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v~  198 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEVK  198 (576)
T ss_pred             EeecCcccCceEEEEEeccCCccc
Confidence            998754  4799999999998764

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=2.2e-16  Score=86.14  Aligned_cols=87  Identities=26%  Similarity=0.381  Sum_probs=73.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +|++.+.||+|+||.||++.+..++..+|+|.+........ ....+.+|+.+++.++ |+|++++++.+...+..+++|
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC-CCCEeeeeeeecCCCeEEEEE
Confidence            58889999999999999999888889999999976433222 1234678999999998 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        80 e~~~~~~L~   88 (285)
T cd05605          80 TLMNGGDLK   88 (285)
T ss_pred             eccCCCcHH
Confidence            999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0033|consensus

Probab=99.71  E-value=5.9e-20  Score=97.39  Aligned_cols=88  Identities=22%  Similarity=0.363  Sum_probs=79.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|.|+.|++|....+|..+++|+++...+.....+.+.+|+.+.+.++ ||||+++.+.+......|+|+
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC-CCcEeehhhhhcccceeEEEE
Confidence            5688889999999999999999999999999999877655556778999999999999 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++.|++|.
T Consensus        90 e~m~G~dl~   98 (355)
T KOG0033|consen   90 DLVTGGELF   98 (355)
T ss_pred             ecccchHHH
Confidence            999999874

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.71  E-value=6.8e-17  Score=91.10  Aligned_cols=88  Identities=15%  Similarity=0.168  Sum_probs=71.6

Q ss_pred             CcceeeceecCcCeeEEEEEEE-----ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++..     ..++..+|+|.+..... ....+.+.+|+.++..+.+||||+++++.+...+.
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            3688899999999999999864     23455899999865432 22345688899999999558999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus       114 ~~lv~E~~~~g~L~  127 (375)
T cd05104         114 TLVITEYCCYGDLL  127 (375)
T ss_pred             ceeeehhccCCcHH
Confidence            99999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.71  E-value=3.6e-16  Score=95.32  Aligned_cols=89  Identities=16%  Similarity=0.142  Sum_probs=77.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      |.+|.+.+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..+. |||++++++.+..++..++
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyL   79 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYY   79 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEE
Confidence            67899999999999999999999888999999999754322 223456889999999999 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++++|.
T Consensus        80 VMEY~eGGSL~   90 (932)
T PRK13184         80 TMPYIEGYTLK   90 (932)
T ss_pred             EEEcCCCCCHH
Confidence            99999999874

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.71  E-value=3.5e-16  Score=85.35  Aligned_cols=87  Identities=25%  Similarity=0.378  Sum_probs=73.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +|+..+.||+|+||.||++....++..+|+|.+....... .....+.+|+.++..++ |++++++.+.+...+..++++
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEEEEEccCCeEEEEE
Confidence            4788899999999999999998899999999987543222 12234678999999998 899999999999889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        80 e~~~~g~L~   88 (285)
T cd05631          80 TIMNGGDLK   88 (285)
T ss_pred             EecCCCcHH
Confidence            999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.71  E-value=3.6e-16  Score=86.11  Aligned_cols=87  Identities=20%  Similarity=0.307  Sum_probs=75.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+++|.+..... ......+.+|+.++..++ |||++++++.+..++..++++
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~   78 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECN-SPYIVGFYGAFYSDGEISICM   78 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCEEEEEe
Confidence            478999999999999999999988888899998865432 233455888999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 ey~~~~~L~   87 (308)
T cd06615          79 EHMDGGSLD   87 (308)
T ss_pred             eccCCCcHH
Confidence            999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0192|consensus

Probab=99.70  E-value=1.7e-16  Score=89.03  Aligned_cols=83  Identities=19%  Similarity=0.247  Sum_probs=69.1

Q ss_pred             eeeceecCcCeeEEEEEEEccCCcE-EEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-eEEEEEe
Q psy8005           5 KITKSFPLGKYATVRRCRDRKNGTQ-YAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-DMILLLE   82 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~~~~~~-~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-~~~lv~e   82 (91)
                      .+.+.+|+|+||+||++....  .. +|+|.+............+.+|+.++..+. ||||+++.+.+..+. ..++|||
T Consensus        44 ~~~~~iG~G~~g~V~~~~~~g--~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   44 PIEEVLGSGSFGTVYKGKWRG--TDVVAVKIISDPDFDDESRKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIVTE  120 (362)
T ss_pred             hhhhhcccCCceeEEEEEeCC--ceeEEEEEecchhcChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEEEE
Confidence            445679999999999998754  44 899999875544333567999999999999 899999999998777 7999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++|+|.
T Consensus       121 y~~~GsL~  128 (362)
T KOG0192|consen  121 YMPGGSLS  128 (362)
T ss_pred             eCCCCcHH
Confidence            99999985

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.70  E-value=2.9e-16  Score=85.76  Aligned_cols=86  Identities=23%  Similarity=0.330  Sum_probs=72.8

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+.+.||.|+||.||++.+..++..+++|.+..... ......+.+|+.+++.++ |||++++++.+...+..+++
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv   81 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLK-HANIVTLHDIIHTERCLTLV   81 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-CCcchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEEEE
Confidence            5789999999999999999999988899999999865432 112345778999999998 89999999999888899999


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      |||+++ +|
T Consensus        82 ~e~~~~-~l   89 (288)
T cd07871          82 FEYLDS-DL   89 (288)
T ss_pred             EeCCCc-CH
Confidence            999975 44

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.70  E-value=1.7e-16  Score=88.58  Aligned_cols=88  Identities=15%  Similarity=0.179  Sum_probs=73.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC-cEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG-TQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      ++|.+.+.||+|+||.||++.....+ ..+++|.+..... .....+.+.+|+.++..+. |||++++++.+...+..++
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCCcceEEEEEeCCEEEE
Confidence            57899999999999999999866554 6899999865432 1223445788999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus       109 v~Ey~~~g~L~  119 (340)
T PTZ00426        109 VLEFVIGGEFF  119 (340)
T ss_pred             EEeCCCCCcHH
Confidence            99999999874

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.70  E-value=5.5e-16  Score=83.19  Aligned_cols=87  Identities=13%  Similarity=0.183  Sum_probs=76.1

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|+..+.||.|+||.++.+....++..+++|.+............+.+|+.+++.++ |+|++++++.+...+..++++|
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~~~e   79 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEME   79 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCC-CCCeeEEEeEEecCCeEEEEEE
Confidence            588999999999999999999888999999998765444444556889999999998 8999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        80 ~~~~~~L~   87 (256)
T cd08221          80 YANGGTLY   87 (256)
T ss_pred             ecCCCcHH
Confidence            99998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.70  E-value=5.7e-16  Score=95.02  Aligned_cols=89  Identities=16%  Similarity=0.290  Sum_probs=75.8

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMI   78 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~   78 (91)
                      +++|.+.+.||+|+||.||++.+...+..+++|.+............+..|+.++..+. ||||+++++.+..  ...+|
T Consensus        12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecCCCEEE
Confidence            46899999999999999999999988889999998765544444566889999999999 8999999998743  45789


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus        91 IVMEY~~gGSL~  102 (1021)
T PTZ00266         91 ILMEFCDAGDLS  102 (1021)
T ss_pred             EEEeCCCCCcHH
Confidence            999999999874

>KOG1026|consensus

Probab=99.69  E-value=2.2e-17  Score=98.10  Aligned_cols=86  Identities=16%  Similarity=0.261  Sum_probs=72.2

Q ss_pred             cceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +.+..+.||+|+||+||.+....     ....||||.++.... ....++|.+|++++..++ |||||++++.+...+++
T Consensus       487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~-~~~~~dF~REaeLla~l~-H~nIVrLlGVC~~~~P~  564 (774)
T KOG1026|consen  487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE-NQARQDFRREAELLAELQ-HPNIVRLLGVCREGDPL  564 (774)
T ss_pred             heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc-HHHHHHHHHHHHHHHhcc-CCCeEEEEEEEccCCee
Confidence            44567899999999999986532     234789999976542 234678999999999999 89999999999999999


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +||+||+..|+|.
T Consensus       565 ~MvFEYm~~GDL~  577 (774)
T KOG1026|consen  565 CMVFEYMDHGDLH  577 (774)
T ss_pred             EEEEEecccccHH
Confidence            9999999999984

>KOG0197|consensus

Probab=99.69  E-value=4.1e-17  Score=92.81  Aligned_cols=82  Identities=16%  Similarity=0.250  Sum_probs=70.1

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      +++++.||+|.||.|+.|..... ..+|+|.+....+   ..+.+.+|+.+|+.++ |++++++++.+....+++|||||
T Consensus       208 l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m---~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piyIVtE~  282 (468)
T KOG0197|consen  208 LKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSM---SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIYIVTEY  282 (468)
T ss_pred             HHHHHHhcCCccceEEEEEEcCC-CcccceEEecccc---ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceEEEEEe
Confidence            45678999999999999988643 4689998876533   2466889999999999 89999999999988899999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      ++.|+|.
T Consensus       283 m~~GsLl  289 (468)
T KOG0197|consen  283 MPKGSLL  289 (468)
T ss_pred             cccCcHH
Confidence            9999885

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.69  E-value=2.5e-16  Score=87.42  Aligned_cols=88  Identities=18%  Similarity=0.270  Sum_probs=74.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+...... ......+..|+.++..+. |+|++++.+.+...+..+++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~~~lv   79 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN-SPWIPQLQYAFQDKDNLYLV   79 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCeEEEE
Confidence            4789999999999999999999989999999999764321 122344778888888887 89999999999888999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~e~~~~~~L~   89 (330)
T cd05601          80 MEYQPGGDLL   89 (330)
T ss_pred             ECCCCCCCHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.69  E-value=4.1e-16  Score=87.91  Aligned_cols=88  Identities=18%  Similarity=0.252  Sum_probs=74.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+...... ......+..|..+++.+. |||++++++.+......+++
T Consensus        43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~lv  121 (371)
T cd05622          43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLYMV  121 (371)
T ss_pred             hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEEE
Confidence            5789999999999999999999989999999998653221 122334678888888888 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       122 ~Ey~~gg~L~  131 (371)
T cd05622         122 MEYMPGGDLV  131 (371)
T ss_pred             EcCCCCCcHH
Confidence            9999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.69  E-value=2.1e-16  Score=89.89  Aligned_cols=88  Identities=15%  Similarity=0.226  Sum_probs=71.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.+.     ..+..+|+|.+..... ....+.+..|+.++..+..|||++++++.+.....
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            35677889999999999999854     2345799999975432 22344688899999999768999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++|+|.
T Consensus       116 ~~iv~E~~~~g~L~  129 (401)
T cd05107         116 IYIITEYCRYGDLV  129 (401)
T ss_pred             cEEEEeccCCCcHH
Confidence            99999999999885

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.69  E-value=4.3e-16  Score=86.62  Aligned_cols=88  Identities=20%  Similarity=0.225  Sum_probs=73.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||.+.....+..+++|.+.+... .......+..+..++..+. |++++++.+.+...+..+++
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv   79 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-NQWITTLHYAFQDENNLYLV   79 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCEEEEE
Confidence            579999999999999999999988888999999865321 1222334777888888887 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        80 ~ey~~~g~L~   89 (332)
T cd05623          80 MDYYVGGDLL   89 (332)
T ss_pred             EeccCCCcHH
Confidence            9999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.68  E-value=1.5e-15  Score=81.91  Aligned_cols=89  Identities=17%  Similarity=0.280  Sum_probs=75.7

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||++....++..+++|.+..... .......+.+|+.+++.++ |||++++++.+...+..++
T Consensus         1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08228           1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNELNI   79 (267)
T ss_pred             CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC-CcceeeeeeeEEECCeEEE
Confidence            4689999999999999999999988899999998865332 2233445788999999998 8999999999988899999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++||+++++|.
T Consensus        80 v~e~~~~~~L~   90 (267)
T cd08228          80 VLELADAGDLS   90 (267)
T ss_pred             EEEecCCCcHH
Confidence            99999998873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG4717|consensus

Probab=99.68  E-value=4.5e-17  Score=94.04  Aligned_cols=87  Identities=24%  Similarity=0.357  Sum_probs=80.1

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |.+.+.||+|.|+.|..+.+.-+|..||||++++..+......++.+|+.+|+-.+ ||||+++++...+...+|+|+|+
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhc-CcCeeeeeehhcccceEEEEEEe
Confidence            66788999999999999999999999999999998877767788999999999999 89999999999999999999999


Q ss_pred             cCCCCCCC
Q psy8005          84 LDLNHHQA   91 (91)
Q Consensus        84 ~~~g~L~~   91 (91)
                      =++|+|++
T Consensus        99 GD~GDl~D  106 (864)
T KOG4717|consen   99 GDGGDLFD  106 (864)
T ss_pred             cCCchHHH
Confidence            99999864

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.68  E-value=2.2e-15  Score=81.91  Aligned_cols=87  Identities=16%  Similarity=0.225  Sum_probs=74.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|++|.||++.+..++..+++|.+..... ......+.+|+.++..++ |||++++++.+...+..++++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~   78 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCD-SPYIIGFYGAFFVENRISICT   78 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEECCEEEEEE
Confidence            468889999999999999999988899999999865432 223456888999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 e~~~~~~l~   87 (279)
T cd06619          79 EFMDGGSLD   87 (279)
T ss_pred             ecCCCCChH
Confidence            999998763

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.68  E-value=1e-15  Score=84.90  Aligned_cols=88  Identities=18%  Similarity=0.209  Sum_probs=72.7

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +|.+.+.||+|+||.||++.+..++..+|+|.+.+.... ....+.+..|..++..+.+|++++++++.+...+..|++|
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            588999999999999999999888899999999764321 2223457778888888885567888999998889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        81 E~~~~g~L~   89 (324)
T cd05587          81 EYVNGGDLM   89 (324)
T ss_pred             cCCCCCcHH
Confidence            999999874

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.68  E-value=1.1e-15  Score=81.93  Aligned_cols=87  Identities=16%  Similarity=0.250  Sum_probs=75.7

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||+|++|.+|++....++..+++|.+............+.+++.+++.++ |||++++++.+...+..++++|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVME   79 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcC-CCCeehheeeeccCCEEEEEEE
Confidence            578889999999999999999888999999998765444444566888999999998 8999999999998899999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        80 ~~~~~~L~   87 (256)
T cd08529          80 YAENGDLH   87 (256)
T ss_pred             eCCCCcHH
Confidence            99998874

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.68  E-value=2.6e-16  Score=88.76  Aligned_cols=88  Identities=17%  Similarity=0.198  Sum_probs=72.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-----CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|++.+.||+|+||.||++.+...     +..+|+|.+..... ......+.+|+.+++.+..|+||+++++.+...+.
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            4688999999999999999875433     34799999975432 23345688899999999448999999999998899


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus       117 ~~lv~ey~~~g~L~  130 (374)
T cd05106         117 VLVITEYCCYGDLL  130 (374)
T ss_pred             eEEeHhhccCCcHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.68  E-value=1.3e-15  Score=81.75  Aligned_cols=87  Identities=21%  Similarity=0.324  Sum_probs=75.0

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||+|+||.+|.+.....+..+++|.+............+.+|+.+++.++ |+|++++.+.+...+..++++|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVMD   79 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCC-CCCeeeeEeeecCCCeEEEEEe
Confidence            488899999999999999999888899999998754333333456888999999998 8999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        80 ~~~~~~l~   87 (256)
T cd08218          80 YCEGGDLY   87 (256)
T ss_pred             cCCCCcHH
Confidence            99998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.67  E-value=9.9e-16  Score=84.16  Aligned_cols=87  Identities=17%  Similarity=0.305  Sum_probs=70.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc----------------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK----------------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV   65 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~----------------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   65 (91)
                      ++|.+.+.||+|+||.||++....                .+..+|+|.+..... ......+.+|+.++..++ |||++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv   82 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLK-DPNII   82 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcC-CCCee
Confidence            468889999999999999997532                234689998865432 233456889999999998 89999


Q ss_pred             eeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          66 QLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        66 ~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      ++++.+...+..+++|||+++++|.
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~  107 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDLN  107 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcHH
Confidence            9999998888999999999998874

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.67  E-value=1.3e-15  Score=81.69  Aligned_cols=87  Identities=14%  Similarity=0.230  Sum_probs=75.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|...+.||+|++|.+|.+....++..+++|.+............+.+|+.+++.++ |||++++++.+...+..++++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS-HPNIIEYYENFLEDKALMIVME   79 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCC-CCchhheeeeEecCCEEEEEEe
Confidence            588899999999999999999888899999999765544444556889999999998 8999999999888889999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        80 ~~~~~~L~   87 (256)
T cd08220          80 YAPGGTLA   87 (256)
T ss_pred             cCCCCCHH
Confidence            99998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.67  E-value=1.1e-15  Score=85.00  Aligned_cols=83  Identities=20%  Similarity=0.290  Sum_probs=69.5

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||.+.+..++..+|+|.+.+..... .....+..|..++..+.+||||+++++.+......+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46899999999999998889999999997653222 22344778888888886689999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        81 g~L~   84 (329)
T cd05588          81 GDLM   84 (329)
T ss_pred             CCHH
Confidence            9874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.67  E-value=1.3e-15  Score=91.16  Aligned_cols=89  Identities=21%  Similarity=0.300  Sum_probs=76.3

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      |++|.+.+.||+|+||.||++.+...+..+|+|.+...... ......+..|+.++..+. |+||++++..+......++
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK-SPFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC-CCCcCeEEEEEEECCEEEE
Confidence            57899999999999999999999988999999999764322 223455788889999888 8999999999988899999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++++|.
T Consensus        82 VmEy~~g~~L~   92 (669)
T cd05610          82 VMEYLIGGDVK   92 (669)
T ss_pred             EEeCCCCCCHH
Confidence            99999998874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.67  E-value=1.8e-15  Score=83.89  Aligned_cols=88  Identities=18%  Similarity=0.223  Sum_probs=72.0

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +|.+.+.||+|+||.||++.+..++..+|+|.+.+.... .........+..++..+.+|++++++.+++...+..+++|
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            588899999999999999999888899999999764321 1122345667777777766899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        81 E~~~~g~L~   89 (323)
T cd05616          81 EYVNGGDLM   89 (323)
T ss_pred             cCCCCCCHH
Confidence            999999874

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.67  E-value=1.1e-15  Score=84.83  Aligned_cols=84  Identities=12%  Similarity=0.210  Sum_probs=71.1

Q ss_pred             eeceecCc--CeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           6 ITKSFPLG--KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         6 ~~~~ig~g--~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      +.+.||+|  +|+.|+++....++..+|+|.+............+.+|+.+++.++ ||||+++++.+..++..++++||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~   80 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTSF   80 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEECCEEEEEEec
Confidence            46789999  6889999999999999999999765433333455778999999998 89999999999999999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++|+|.
T Consensus        81 ~~~~~l~   87 (327)
T cd08227          81 MAYGSAK   87 (327)
T ss_pred             cCCCcHH
Confidence            9998874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.67  E-value=3.3e-15  Score=80.52  Aligned_cols=88  Identities=19%  Similarity=0.277  Sum_probs=75.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|++|.||++....++..+++|.+..... .......+.+|+.+++.++ |++++++.+.+...+..+++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~~~lv   80 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYLASFIENNELNIV   80 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCeeeeeeeeecCCeEEEE
Confidence            689999999999999999999988899999998865332 2223556889999999998 89999999999988999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +||+++++|.
T Consensus        81 ~e~~~~~~L~   90 (267)
T cd08224          81 LELADAGDLS   90 (267)
T ss_pred             EecCCCCCHH
Confidence            9999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.67  E-value=8.4e-16  Score=85.19  Aligned_cols=82  Identities=24%  Similarity=0.340  Sum_probs=69.3

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.+++.+. |||++++.+.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~   79 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence            4689999999999999888999999999764321 222345778999999998 89999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        80 ~~L~   83 (323)
T cd05571          80 GELF   83 (323)
T ss_pred             CcHH
Confidence            9874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.67  E-value=1.1e-15  Score=84.75  Aligned_cols=88  Identities=18%  Similarity=0.217  Sum_probs=72.3

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +|...+.||+|+||.||++.+..++..+|+|.+.+.... ......+..|..++..+.+|++++++.+++...+..+++|
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            477889999999999999999988999999999764321 2223446778888888876788889999999889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        81 Ey~~~g~L~   89 (323)
T cd05615          81 EYVNGGDLM   89 (323)
T ss_pred             cCCCCCcHH
Confidence            999999874

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.66  E-value=2.2e-15  Score=82.78  Aligned_cols=84  Identities=21%  Similarity=0.372  Sum_probs=71.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+...... .......+|+.+++.++ |||++++++.+......+++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~   82 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTLVF   82 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCC-CCCcCeEEEEEecCCeEEEEE
Confidence            6899999999999999999999888999999998754321 11334678999999998 899999999999999999999


Q ss_pred             eccCCC
Q psy8005          82 ELLDLN   87 (91)
Q Consensus        82 e~~~~g   87 (91)
                      ||++++
T Consensus        83 e~~~~~   88 (303)
T cd07869          83 EYVHTD   88 (303)
T ss_pred             ECCCcC
Confidence            999643

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.66  E-value=5.6e-16  Score=86.19  Aligned_cols=88  Identities=13%  Similarity=0.204  Sum_probs=69.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-C
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~   75 (91)
                      ++|++.+.||+|+||.||++...     ..+..+|+|.+..... ......+.+|+.++..+.+||||+++++.+... .
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            57899999999999999999742     2345799999865422 223456888999999995589999999877643 4


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      .++++|||+++|+|.
T Consensus        86 ~~~lv~ey~~~g~L~  100 (338)
T cd05102          86 PLMVIVEFCKYGNLS  100 (338)
T ss_pred             ceEEEEecCCCCcHH
Confidence            689999999999884

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.66  E-value=1.7e-15  Score=81.78  Aligned_cols=86  Identities=17%  Similarity=0.278  Sum_probs=73.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||+|+||.||++.+..++..+++|.+......  ....+.+|+..++.++ |||++++++.+...+..++++
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~~~iv~   85 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD--DFSLIQQEIFMVKECK-HCNIVAYFGSYLSREKLWICM   85 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc--hHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEEEE
Confidence            4688999999999999999999888899999998654221  1334678899999998 899999999999899999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        86 e~~~~~~L~   94 (267)
T cd06646          86 EYCGGGSLQ   94 (267)
T ss_pred             eCCCCCcHH
Confidence            999998874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.66  E-value=1e-15  Score=83.28  Aligned_cols=87  Identities=21%  Similarity=0.340  Sum_probs=74.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|++|.||++.+...+..+++|.+............+.+|+.+++.+. |||++++.+.+......++++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   79 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR-HENLVNLIEVFRRKKRLYLVF   79 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcC-CcchhhHHHhcccCCeEEEEE
Confidence            5789999999999999999999888899999998764433333455788999999998 899999999999999999999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      ||++++.|
T Consensus        80 e~~~~~~l   87 (286)
T cd07846          80 EFVDHTVL   87 (286)
T ss_pred             ecCCccHH
Confidence            99998765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.66  E-value=8.6e-16  Score=84.94  Aligned_cols=82  Identities=24%  Similarity=0.332  Sum_probs=67.4

Q ss_pred             ceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEecc
Q psy8005           8 KSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   84 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~   84 (91)
                      +.||+|+||.||.+.+.   .++..+++|.+...............|+.++..++ ||||+++++.+...+..|++|||+
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcCC
Confidence            57999999999988753   46789999999765432223345678899999998 899999999999999999999999


Q ss_pred             CCCCCC
Q psy8005          85 DLNHHQ   90 (91)
Q Consensus        85 ~~g~L~   90 (91)
                      ++|+|.
T Consensus        81 ~~~~L~   86 (318)
T cd05582          81 RGGDLF   86 (318)
T ss_pred             CCCcHH
Confidence            999874

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.66  E-value=1.3e-15  Score=81.85  Aligned_cols=87  Identities=18%  Similarity=0.326  Sum_probs=74.9

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +|++.+.||.|+||.||++.+..++..+++|.+.+..... .....+.+|+.+++.++ |||++++++.+......++++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   79 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVV   79 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCeEEEEE
Confidence            5889999999999999999998889999999997643222 23456888999999998 899999999999899999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        80 e~~~~~~L~   88 (258)
T cd05578          80 DLLLGGDLR   88 (258)
T ss_pred             eCCCCCCHH
Confidence            999998874

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.66  E-value=5.5e-16  Score=86.52  Aligned_cols=88  Identities=14%  Similarity=0.207  Sum_probs=70.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~   75 (91)
                      ++|++.+.||+|+||.||++.+.     ..+..+|+|.+..... ......+.+|+.++..+.+|+|++++++.+.. ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            47899999999999999999742     3467899999875432 22244578899999999768999999987654 45


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++|+|.
T Consensus        86 ~~~lv~ey~~~g~L~  100 (343)
T cd05103          86 PLMVIVEFCKFGNLS  100 (343)
T ss_pred             ceEEEEeccCCCcHH
Confidence            689999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.66  E-value=1.9e-15  Score=82.62  Aligned_cols=88  Identities=22%  Similarity=0.340  Sum_probs=75.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|++|.||++.+..++..+++|.+...... ......+.+|+.+++.++ |||++++.+.+...+..+++
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v   79 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLV   79 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEE
Confidence            4789999999999999999999888899999998754321 223445888999999999 89999999999989999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus        80 ~e~~~~~~L~   89 (290)
T cd05580          80 MEYVPGGELF   89 (290)
T ss_pred             EecCCCCCHH
Confidence            9999998874

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.66  E-value=1.9e-15  Score=81.74  Aligned_cols=87  Identities=21%  Similarity=0.260  Sum_probs=70.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      .+|++.+.||+|+||.||++...   ..+..+++|.+..... ......+.+|+..+..+. |||++++++.+...+..+
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~   82 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFD-HSNIVRLEGVITRGNTMM   82 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecCCCcE
Confidence            36888999999999999998754   2345789998875432 222345888999999998 899999999998888999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++|+|.
T Consensus        83 lv~e~~~~~~L~   94 (266)
T cd05064          83 IVTEYMSNGALD   94 (266)
T ss_pred             EEEEeCCCCcHH
Confidence            999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0662|consensus

Probab=99.66  E-value=1.6e-16  Score=81.43  Aligned_cols=85  Identities=26%  Similarity=0.405  Sum_probs=74.9

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |.+|.-.+.||+|.||+|+++.+..+..-+|+|..........-+....+|+.+++.+. |.||+++++..+++..+-+|
T Consensus         1 m~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelk-hknivrl~dvlhsdkkltlv   79 (292)
T KOG0662|consen    1 MQKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_pred             CcchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEe
Confidence            67888889999999999999999999999999998876544444566889999999999 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      +|||..
T Consensus        80 fe~cdq   85 (292)
T KOG0662|consen   80 FEFCDQ   85 (292)
T ss_pred             HHHhhH
Confidence            999964

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.65  E-value=4.1e-15  Score=81.92  Aligned_cols=84  Identities=25%  Similarity=0.364  Sum_probs=71.7

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+.+.||+|+||.||++.+..++..+++|.+...... .....+.+|+.+++.++ |+|++++++.+...+..+++
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv   82 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLK-HANIVTLHDIVHTDKSLTLV   82 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCC-CCCcceEEEEEeeCCeEEEE
Confidence            67899999999999999999999888889999998754321 12334678999999998 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      |||+++
T Consensus        83 ~e~~~~   88 (309)
T cd07872          83 FEYLDK   88 (309)
T ss_pred             EeCCCC
Confidence            999975

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.65  E-value=4.2e-15  Score=79.83  Aligned_cols=86  Identities=15%  Similarity=0.268  Sum_probs=73.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|++.+.||.|+||.||.+.+..++..+++|.+..... ....+.+..|+.+++.+. |+|++++.+.+...+..++++|
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e   78 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMK-HPNIVAFKESFEADGHLYIVME   78 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEEe
Confidence            58889999999999999999988899999999864432 223456778889999998 8999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        79 ~~~~~~l~   86 (255)
T cd08219          79 YCDGGDLM   86 (255)
T ss_pred             eCCCCcHH
Confidence            99998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.65  E-value=1.4e-15  Score=81.69  Aligned_cols=86  Identities=24%  Similarity=0.434  Sum_probs=73.8

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |++.+.||+|+||.||++.+...+..+++|.+...............|+..++.+. |+|++++.+.+......+++||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~v~~~   79 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR-HPNIVQILDVFQDDNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT-BTTBCHEEEEEEESSEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc-ccccccccccccccccccccccc
Confidence            78899999999999999999999999999999877543333334456899999997 89999999999999999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus        80 ~~~~~L~   86 (260)
T PF00069_consen   80 CPGGSLQ   86 (260)
T ss_dssp             ETTEBHH
T ss_pred             ccccccc
Confidence            9998763

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.65  E-value=2e-15  Score=83.76  Aligned_cols=82  Identities=24%  Similarity=0.343  Sum_probs=68.9

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.+++.+. |||++++.+.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCC
Confidence            4689999999999999888999999999764321 122345678899999998 89999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        80 ~~L~   83 (323)
T cd05595          80 GELF   83 (323)
T ss_pred             CcHH
Confidence            9874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1.3e-15  Score=84.12  Aligned_cols=80  Identities=25%  Similarity=0.309  Sum_probs=67.6

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNH   88 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~   88 (91)
                      ||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++ ||||+++.+.+...+..+++|||+++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~   79 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGE   79 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence            68999999999999888899999999754321 222345778999999998 8999999999999999999999999998


Q ss_pred             CC
Q psy8005          89 HQ   90 (91)
Q Consensus        89 L~   90 (91)
                      |.
T Consensus        80 L~   81 (312)
T cd05585          80 LF   81 (312)
T ss_pred             HH
Confidence            74

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.65  E-value=3.1e-15  Score=81.35  Aligned_cols=87  Identities=23%  Similarity=0.358  Sum_probs=73.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|++|.||++.+..++..+++|.+..........+.+.+|+.+++.+. |+|++++.+.+......++++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v~   79 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLVF   79 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEEE
Confidence            5789999999999999999999888899999988654322222345778999999998 899999999999999999999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      ||++++.|
T Consensus        80 e~~~~~~l   87 (286)
T cd07847          80 EYCDHTVL   87 (286)
T ss_pred             eccCccHH
Confidence            99998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.65  E-value=5.4e-15  Score=80.74  Aligned_cols=87  Identities=25%  Similarity=0.377  Sum_probs=73.0

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .|+..+.||+|+||.||.+.+..++..+++|.+........ ....+.+|+.+++.++ |++++.+.+.+...+..+++|
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEE
Confidence            47788899999999999999999999999999876433222 1234678999999998 799999999998889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        80 e~~~g~~L~   88 (285)
T cd05630          80 TLMNGGDLK   88 (285)
T ss_pred             EecCCCcHH
Confidence            999999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.65  E-value=1.5e-15  Score=82.77  Aligned_cols=87  Identities=18%  Similarity=0.267  Sum_probs=74.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+...+..+++|.+.... .......+.+|+.++..+. |+|++++++.+...+..++++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~   78 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAV-SPYIVDFYGAFFIEGAVYMCM   78 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcC-CCcHHhhhhheecCCeEEEEE
Confidence            57899999999999999999998889999999886542 2222456888999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 e~~~~~~l~   87 (286)
T cd06622          79 EYMDAGSLD   87 (286)
T ss_pred             eecCCCCHH
Confidence            999998763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.65  E-value=2.2e-15  Score=83.54  Aligned_cols=86  Identities=19%  Similarity=0.266  Sum_probs=68.7

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHH---HhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVL---EACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      |.+.+.||+|+||.||++.+..++..+|+|.+...... ....+.+.+|..++   ..+. |||++++++.+...+..++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~-hp~i~~~~~~~~~~~~~~l   79 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER-HPFLVNLFACFQTEDHVCF   79 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccC-CCChhceeeEEEcCCEEEE
Confidence            67889999999999999999888999999999754321 12233456665554   4455 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++++|.
T Consensus        80 v~E~~~~~~L~   90 (324)
T cd05589          80 VMEYAAGGDLM   90 (324)
T ss_pred             EEcCCCCCcHH
Confidence            99999999873

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0663|consensus

Probab=99.65  E-value=1.8e-16  Score=87.05  Aligned_cols=84  Identities=20%  Similarity=0.347  Sum_probs=70.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~l   79 (91)
                      ++|+....|++|+||.||++.+..++.-||+|.+.-..-...++-.-++|+.++..+. ||||+.+.++...  -+.+|+
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~-H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR-HPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC-CCCeeeeEEEEeccccceeee
Confidence            5688889999999999999999999999999999765433444555789999999999 8999999887653  457999


Q ss_pred             EEeccCC
Q psy8005          80 LLELLDL   86 (91)
Q Consensus        80 v~e~~~~   86 (91)
                      |||||+.
T Consensus       155 VMe~~Eh  161 (419)
T KOG0663|consen  155 VMEYVEH  161 (419)
T ss_pred             eHHHHHh
Confidence            9999975

>KOG0582|consensus

Probab=99.65  E-value=1.7e-15  Score=85.71  Aligned_cols=87  Identities=15%  Similarity=0.196  Sum_probs=77.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||.|.-+.||++.....+..||+|+++...-..+ -..+.+|+..+.-++ ||||++++.+|..+..+|+||
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~-HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLID-HPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcC-CCCcceEEEEEEecceeEEee
Confidence            578999999999999999999999999999999987643332 456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      .||.+|+++
T Consensus       104 pfMa~GS~l  112 (516)
T KOG0582|consen  104 PFMAGGSLL  112 (516)
T ss_pred             hhhcCCcHH
Confidence            999999875

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.64  E-value=2.5e-15  Score=81.84  Aligned_cols=87  Identities=18%  Similarity=0.384  Sum_probs=74.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|++|.||++.....+..+++|.+..... ......+.+|+.+++.+. |||++++.+.+...+..++++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   82 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECR-SPYIVSFYGAFLNENNICMCM   82 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcC-CCCcceEeeeEecCCEEEEEE
Confidence            578889999999999999999988888999998865432 223456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        83 e~~~~~~L~   91 (284)
T cd06620          83 EFMDCGSLD   91 (284)
T ss_pred             ecCCCCCHH
Confidence            999998873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=2.7e-15  Score=81.51  Aligned_cols=86  Identities=19%  Similarity=0.325  Sum_probs=74.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||.|++|.||++....++..+++|.+....  ....+.+..|+.+++.++ |+|++++.+.+......+++|
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES--EEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWILI   81 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC--HHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEe
Confidence            57889999999999999999988888899999986542  223456888999999999 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        82 e~~~~~~L~   90 (280)
T cd06611          82 EFCDGGALD   90 (280)
T ss_pred             eccCCCcHH
Confidence            999998763

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0612|consensus

Probab=99.64  E-value=1.6e-17  Score=101.51  Aligned_cols=88  Identities=22%  Similarity=0.254  Sum_probs=77.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.|.....+.++.-||+|.+.+..+ ....+.-|..|-.+|..-+ .++|+.++..|++..++|+|
T Consensus        75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~LYlV  153 (1317)
T KOG0612|consen   75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYLYLV  153 (1317)
T ss_pred             HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccceEEE
Confidence            578999999999999999999999999999999988543 2334556888889998887 69999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||++||+|.
T Consensus       154 MdY~pGGDll  163 (1317)
T KOG0612|consen  154 MDYMPGGDLL  163 (1317)
T ss_pred             EecccCchHH
Confidence            9999999974

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.64  E-value=4e-15  Score=82.74  Aligned_cols=82  Identities=24%  Similarity=0.355  Sum_probs=69.2

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||.+.+..++..+|+|.+.+.... ......+.+|+.+++.+. |||++++.+.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~   79 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNG   79 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCC
Confidence            3689999999999999888999999999764321 222345778899999998 89999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        80 g~L~   83 (328)
T cd05593          80 GELF   83 (328)
T ss_pred             CCHH
Confidence            9874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=8e-15  Score=78.94  Aligned_cols=88  Identities=19%  Similarity=0.268  Sum_probs=74.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh---HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD---LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|.+.+.||+|++|.||.+.+..++..+++|.+........   ....+.+|+.+++.++ |||++++++.+......+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~   80 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HERIVQYYGCLRDDETLS   80 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEccCCeEE
Confidence            578999999999999999999888889999999875432221   2345788999999998 899999999999999999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +++|++++++|.
T Consensus        81 ~v~e~~~~~~l~   92 (263)
T cd06625          81 IFMEYMPGGSVK   92 (263)
T ss_pred             EEEEECCCCcHH
Confidence            999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.64  E-value=8.5e-15  Score=82.17  Aligned_cols=85  Identities=24%  Similarity=0.303  Sum_probs=70.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++ |||++++++.+....      
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCccccc
Confidence            5789999999999999999999888999999998754333333455778999999998 899999998875443      


Q ss_pred             eEEEEEeccCCC
Q psy8005          76 DMILLLELLDLN   87 (91)
Q Consensus        76 ~~~lv~e~~~~g   87 (91)
                      ..+++|||++++
T Consensus       100 ~~~lv~e~~~~~  111 (359)
T cd07876         100 DVYLVMELMDAN  111 (359)
T ss_pred             eeEEEEeCCCcC
Confidence            479999999765

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4250|consensus

Probab=99.64  E-value=1.4e-16  Score=93.66  Aligned_cols=83  Identities=19%  Similarity=0.308  Sum_probs=70.0

Q ss_pred             eeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------eEEE
Q psy8005           6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------DMIL   79 (91)
Q Consensus         6 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------~~~l   79 (91)
                      ..+.||+|+||.||++.++.+|..+|+|...+... ...++.+.+|+++++.++ |+|||+++++-++..      ...+
T Consensus        17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~-~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS-LRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             ehhhhcCCccceeeeecccccccchhHHhhhhhcc-cchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCcccccceE
Confidence            45789999999999999999999999999977542 223667899999999999 899999998765433      4679


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +||||.+|+|.
T Consensus        95 vmEyC~gGsL~  105 (732)
T KOG4250|consen   95 VMEYCSGGSLR  105 (732)
T ss_pred             EEeecCCCcHH
Confidence            99999999985

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.64  E-value=9.6e-15  Score=78.68  Aligned_cols=87  Identities=17%  Similarity=0.214  Sum_probs=74.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.+|.|++|.||++....++..+++|.+....... ....+.+|+..++.+. |+|++++.+.+......++++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~   78 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDELWLVM   78 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCEEEEEE
Confidence            57899999999999999999988788899999987544322 3456889999999998 899999999998899999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        79 e~~~~~~l~   87 (267)
T cd06610          79 PYLSGGSLL   87 (267)
T ss_pred             eccCCCcHH
Confidence            999998764

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.64  E-value=4.3e-15  Score=79.70  Aligned_cols=87  Identities=15%  Similarity=0.248  Sum_probs=74.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||+|++|.||++.....+..+++|.+............+.+|+.+++.++ |+|++++++.+......++++|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e   79 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK-HPNIVTFFASFQENGRLFIVME   79 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCC-CCChhhhhheeccCCeEEEEEe
Confidence            578899999999999999999888899999998765433333456778999999998 8999999999988899999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        80 ~~~~~~L~   87 (257)
T cd08225          80 YCDGGDLM   87 (257)
T ss_pred             cCCCCcHH
Confidence            99988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.63  E-value=9.7e-15  Score=79.87  Aligned_cols=85  Identities=26%  Similarity=0.430  Sum_probs=72.6

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+.+.||.|.+|.||++.+..++..+++|.+............+.+|+..++.+. |+|++++++.+......+++
T Consensus         1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv   79 (294)
T PLN00009          1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKRLYLV   79 (294)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhcc-CCCEeeEEEEEecCCeEEEE
Confidence            57899999999999999999999888899999998654332222345778999999998 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      +||+++
T Consensus        80 ~e~~~~   85 (294)
T PLN00009         80 FEYLDL   85 (294)
T ss_pred             Eecccc
Confidence            999964

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.63  E-value=5.7e-15  Score=82.15  Aligned_cols=83  Identities=22%  Similarity=0.300  Sum_probs=68.4

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++.+..++..+|+|.+.+.... ......+..|..++..+.+|||++++++++...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4689999999999999988999999999765322 222344677888887775589999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        81 ~~L~   84 (329)
T cd05618          81 GDLM   84 (329)
T ss_pred             CCHH
Confidence            9874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.63  E-value=6.9e-15  Score=85.30  Aligned_cols=85  Identities=18%  Similarity=0.159  Sum_probs=71.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccC-CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKN-GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .|.+.+.||+|++|.||.+....+ +..+++|.+....  ......+.+|+.+++.++ ||||+++++.+...+..+++|
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~~lv~  144 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACD-HFGIVKHFDDFKSDDKLLLIM  144 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEECCEEEEEE
Confidence            378899999999999999988776 6788888765432  222345778999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       145 E~~~gg~L~  153 (478)
T PTZ00267        145 EYGSGGDLN  153 (478)
T ss_pred             ECCCCCCHH
Confidence            999999884

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.63  E-value=8.3e-15  Score=80.10  Aligned_cols=86  Identities=19%  Similarity=0.313  Sum_probs=74.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||.|+||.||++.+..++..+++|.+....  ......+..++..++.++ |+|++++.+.+..+...+++|
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   88 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCN-HPYIVKLLGAFYWDGKLWIMI   88 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCeEEEEE
Confidence            46889999999999999999998888999999986542  233456888999999998 899999999998889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        89 e~~~~~~l~   97 (292)
T cd06644          89 EFCPGGAVD   97 (292)
T ss_pred             ecCCCCcHH
Confidence            999998763

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.63  E-value=4.3e-15  Score=82.29  Aligned_cols=83  Identities=18%  Similarity=0.238  Sum_probs=67.9

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++.+..++..+|+|.+...... .........|..++..+.+||+++++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            3689999999999999888899999999764321 222344667888887765689999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      ++|.
T Consensus        81 ~~L~   84 (321)
T cd05591          81 GDLM   84 (321)
T ss_pred             CcHH
Confidence            9874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.63  E-value=4.8e-15  Score=80.62  Aligned_cols=86  Identities=24%  Similarity=0.402  Sum_probs=74.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|++.+.||+|++|.||++.+..++..+++|.+............+.+|+.+++.+. |+|++++.+.+......++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e   79 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVME   79 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEec
Confidence            588999999999999999999888999999999765433334556888999999998 8999999999998999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+ +++|.
T Consensus        80 ~~-~~~L~   86 (286)
T cd07832          80 YM-PSDLS   86 (286)
T ss_pred             cc-CCCHH
Confidence            99 88764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.63  E-value=4e-15  Score=82.68  Aligned_cols=88  Identities=26%  Similarity=0.326  Sum_probs=71.8

Q ss_pred             cceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCc--hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +|.+.+.||+|+||.||++...   .++..+|+|.+.+....  ......+..|+.++..+.+|++++++.+.+...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            5889999999999999988763   45788999998754321  122345778899999997689999999999989999


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++|||+++|+|.
T Consensus        81 ~lv~e~~~~g~L~   93 (332)
T cd05614          81 HLILDYVSGGEMF   93 (332)
T ss_pred             EEEEeCCCCCcHH
Confidence            9999999999874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.63  E-value=5.1e-15  Score=82.15  Aligned_cols=82  Identities=23%  Similarity=0.332  Sum_probs=68.4

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||.+.+..++..+|+|.+...... ......+..|+.++..+. |||++++.+.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANG   79 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4689999999999999888999999999764321 122345677888899888 89999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        80 ~~L~   83 (325)
T cd05594          80 GELF   83 (325)
T ss_pred             CcHH
Confidence            9874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.63  E-value=2.5e-15  Score=81.12  Aligned_cols=86  Identities=17%  Similarity=0.303  Sum_probs=73.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+.....  .....+.+++.+++.++ |||++++++.+...+..++++
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~~~lv~   85 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCK-HSNIVAYFGSYLRRDKLWICM   85 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEE
Confidence            467888999999999999999988889999999865432  12334778889999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        86 e~~~~~~L~   94 (267)
T cd06645          86 EFCGGGSLQ   94 (267)
T ss_pred             eccCCCcHH
Confidence            999998874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.63  E-value=6.9e-15  Score=80.02  Aligned_cols=80  Identities=28%  Similarity=0.362  Sum_probs=66.3

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNH   88 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~   88 (91)
                      ||+|+||.||++....++..+++|.+........ .......|+.+++.++ |||++++.+.+......+++|||+++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~g~~   79 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLAYAFESKTHLCLVMSLMNGGD   79 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC-CCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence            6899999999999988899999999875432221 1223566899999998 8999999999998899999999999998


Q ss_pred             CC
Q psy8005          89 HQ   90 (91)
Q Consensus        89 L~   90 (91)
                      |.
T Consensus        80 L~   81 (277)
T cd05607          80 LK   81 (277)
T ss_pred             HH
Confidence            73

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=8.4e-15  Score=80.84  Aligned_cols=88  Identities=19%  Similarity=0.189  Sum_probs=75.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|++.+.||+|++|.||.+....++..+++|.+....... .....+..|+.+++.++ |++++++++.+......+++
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv   79 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLV   79 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEE
Confidence            47899999999999999999998888999999997654332 23456888999999999 89999999999888999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +||+.+++|.
T Consensus        80 ~e~~~~~~L~   89 (316)
T cd05574          80 MDYCPGGELF   89 (316)
T ss_pred             EEecCCCCHH
Confidence            9999998874

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.63  E-value=5.2e-15  Score=80.41  Aligned_cols=86  Identities=15%  Similarity=0.225  Sum_probs=73.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|+..+.||+|+||.||.+.+..++..+++|.+..... ......+.+|+.+++.+. |+|++++.+.+..++..++++|
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKGTKLWIIME   82 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEEEe
Confidence            46778899999999999999988888999999875432 222456888999999998 8999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        83 ~~~~~~L~   90 (277)
T cd06640          83 YLGGGSAL   90 (277)
T ss_pred             cCCCCcHH
Confidence            99999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.63  E-value=1e-14  Score=79.61  Aligned_cols=87  Identities=24%  Similarity=0.377  Sum_probs=72.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .|...+.||+|+||.||.+.+..++..+|+|.+........ ....+.+|+.+++.++ |++++.+.+.+...+..++++
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-SQFVVNLAYAYETKDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC-CcCceeEEEEEecCCEEEEEE
Confidence            36778899999999999999988899999999876433222 2334678999999998 899999999998889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        80 e~~~~~~L~   88 (285)
T cd05632          80 TIMNGGDLK   88 (285)
T ss_pred             EeccCccHH
Confidence            999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.63  E-value=1.3e-14  Score=79.66  Aligned_cols=86  Identities=19%  Similarity=0.233  Sum_probs=74.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||+|++|.||++.+..++..+++|.+......  ..+.+.+|+.+++.++ |+|++++.+.+..++..++++
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCEEEEee
Confidence            4688899999999999999998888999999998754322  2345788899999998 899999999999899999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        96 e~~~~~~L~  104 (297)
T cd06656          96 EYLAGGSLT  104 (297)
T ss_pred             cccCCCCHH
Confidence            999998874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.63  E-value=1.2e-14  Score=79.92  Aligned_cols=88  Identities=17%  Similarity=0.286  Sum_probs=74.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|++.+.||+|.||.||++.+...+..+++|.+...... ......+.+|+.+++.+. |||++++++.+...+..+++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv   79 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE-NPFVVSMFCSFETKRHLCMV   79 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEecCCEEEEE
Confidence            4789999999999999999999888899999998765321 122345778899999998 89999999999988899999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +||+++++|.
T Consensus        80 ~e~~~g~~L~   89 (305)
T cd05609          80 MEYVEGGDCA   89 (305)
T ss_pred             EecCCCCcHH
Confidence            9999998874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.63  E-value=3.5e-15  Score=82.67  Aligned_cols=83  Identities=20%  Similarity=0.308  Sum_probs=67.7

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++.+..++..+|+|.+.+.... ......+..|..++..+.+|||++++++.+...+..+++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999999888999999998754321 122344667778887765589999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        81 g~L~   84 (320)
T cd05590          81 GDLM   84 (320)
T ss_pred             chHH
Confidence            9874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.63  E-value=1.2e-14  Score=79.75  Aligned_cols=84  Identities=24%  Similarity=0.366  Sum_probs=71.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++.|.+.+.||+|+||.||++.+..++..+++|.+..... ......+.+|+.+++.++ |+||+++++.+...+..+++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~lv   82 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV   82 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc-cCchhHHHHHHHHHHhcC-CCCcceEEEEEecCCeEEEE
Confidence            5789999999999999999999988889999999865432 122345678999999998 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      +||+++
T Consensus        83 ~e~~~~   88 (301)
T cd07873          83 FEYLDK   88 (301)
T ss_pred             Eecccc
Confidence            999974

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.63  E-value=6.2e-15  Score=80.27  Aligned_cols=88  Identities=14%  Similarity=0.193  Sum_probs=71.7

Q ss_pred             CCcceeeceecCcCeeEEEEEEEc----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDR----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      +++|++.+.||+|+||.||++...    ..+..+++|.+..... ......+.+|+.+++.+. |||++++.+.+.....
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~   81 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELH-HPNIVCLLGVVTQEQP   81 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCC-CCCeeeEEEEEecCCc
Confidence            467899999999999999999753    3456889998864332 222356888999999998 8999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        82 ~~lv~e~~~~~~L~   95 (283)
T cd05090          82 VCMLFEYLNQGDLH   95 (283)
T ss_pred             eEEEEEcCCCCcHH
Confidence            99999999998773

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.63  E-value=8.8e-15  Score=81.32  Aligned_cols=83  Identities=25%  Similarity=0.344  Sum_probs=69.5

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++.....+..+|+|.+.+.... ......+..|..++..+.+|++++++++++...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4689999999999999888999999999765322 122345778888888887689999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        81 ~~L~   84 (327)
T cd05617          81 GDLM   84 (327)
T ss_pred             CcHH
Confidence            9874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.62  E-value=6.1e-15  Score=80.28  Aligned_cols=87  Identities=25%  Similarity=0.419  Sum_probs=74.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|.+|.||++.+..++..+++|.+............+.+|+.+++.+. |+|++++.+.+...+..++++
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~   79 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLVF   79 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEEE
Confidence            4789999999999999999999888899999998764433333456889999999999 899999999999989999999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      ||++++.+
T Consensus        80 e~~~~~~l   87 (288)
T cd07833          80 EYVERTLL   87 (288)
T ss_pred             ecCCCCHH
Confidence            99987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.62  E-value=1.5e-14  Score=78.59  Aligned_cols=86  Identities=15%  Similarity=0.227  Sum_probs=72.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      -|+..+.||+|+||.||++.+...+..+++|.+..... ......+.+++.++..++ |+|++++++.+...+..++++|
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e   82 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIME   82 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEEEE
Confidence            36778899999999999999888888999998865432 222456888999999998 8999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        83 ~~~~~~l~   90 (277)
T cd06641          83 YLGGGSAL   90 (277)
T ss_pred             eCCCCcHH
Confidence            99998864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.62  E-value=1.3e-14  Score=78.94  Aligned_cols=83  Identities=22%  Similarity=0.395  Sum_probs=70.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||+|++|.||++....++..+++|.+............+.+|+.+++.++ |||++++.+.+..++..++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e   79 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIFE   79 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEEe
Confidence            588899999999999999999888999999998654332223345778999999998 8999999999998999999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      |+++
T Consensus        80 ~~~~   83 (285)
T cd07861          80 FLSM   83 (285)
T ss_pred             cCCC
Confidence            9974

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.62  E-value=8.6e-15  Score=79.14  Aligned_cols=87  Identities=20%  Similarity=0.294  Sum_probs=71.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC---cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|++.+.||+|+||.||++.....+   ..+++|.+..... ......+..|+.++..+. |||++++++.+..++..+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCccE
Confidence            47889999999999999999875443   3688998865432 223456888999999998 899999999998888999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus        82 lv~e~~~~~~L~   93 (267)
T cd05066          82 IVTEYMENGSLD   93 (267)
T ss_pred             EEEEcCCCCCHH
Confidence            999999998874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.62  E-value=1.3e-14  Score=78.12  Aligned_cols=87  Identities=20%  Similarity=0.358  Sum_probs=76.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|++|.+|++.+..++..+++|.+...... .....+.+++..+..+. |+|++++++.+......++++
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~   78 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVL   78 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEE
Confidence            4789999999999999999999888999999998765432 33556889999999998 899999999999889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 e~~~~~~L~   87 (264)
T cd06623          79 EYMDGGSLA   87 (264)
T ss_pred             EecCCCcHH
Confidence            999998874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.62  E-value=1e-14  Score=78.56  Aligned_cols=87  Identities=17%  Similarity=0.187  Sum_probs=75.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|++.+.||+|++|.+|++....++..+++|.+............+..|+.+++.+. |+|++++++.....+..++++|
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK-HPNLVKYYGVEVHREKVYIFME   79 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCC-CCChhheeeeEecCCEEEEEEe
Confidence            478899999999999999998888899999998765443334567899999999998 8999999999888889999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        80 ~~~~~~L~   87 (264)
T cd06626          80 YCSGGTLE   87 (264)
T ss_pred             cCCCCcHH
Confidence            99998874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.62  E-value=8.8e-15  Score=79.72  Aligned_cols=80  Identities=25%  Similarity=0.389  Sum_probs=66.9

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNH   88 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~   88 (91)
                      ||+|+||.||.+.+..++..+++|.+....... .....+..|+.+++.+. |+|++++.+.+......+++|||+++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~   79 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH-SRFIVSLAYAFQTKTDLCLVMTIMNGGD   79 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC-CCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence            689999999999998889999999987543221 12244678899999998 8999999999988889999999999998


Q ss_pred             CC
Q psy8005          89 HQ   90 (91)
Q Consensus        89 L~   90 (91)
                      |.
T Consensus        80 L~   81 (280)
T cd05608          80 LR   81 (280)
T ss_pred             HH
Confidence            73

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.62  E-value=6.4e-15  Score=79.51  Aligned_cols=89  Identities=19%  Similarity=0.316  Sum_probs=75.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|++|.||++....++..+++|.+..... .......+.+|+.+++.+. |+|++++++.+...+..++
T Consensus         1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08229           1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNI   79 (267)
T ss_pred             CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc-CCchhhhhheeEeCCeEEE
Confidence            4689999999999999999999888889999998865432 2223456888999999998 8999999999988889999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++|++++++|.
T Consensus        80 v~e~~~~~~L~   90 (267)
T cd08229          80 VLELADAGDLS   90 (267)
T ss_pred             EEEecCCCCHH
Confidence            99999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.62  E-value=6.3e-15  Score=81.59  Aligned_cols=83  Identities=20%  Similarity=0.262  Sum_probs=68.0

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++.+..++..+|+|.+.+.... ......+..|..++..+.+|||++++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999999888899999999764321 122334667888888775689999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        81 ~~L~   84 (318)
T cd05570          81 GDLM   84 (318)
T ss_pred             CCHH
Confidence            9874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.62  E-value=7.1e-15  Score=81.39  Aligned_cols=83  Identities=18%  Similarity=0.192  Sum_probs=66.4

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++.+..++..+|+|.+...... .........|..++....+|||++++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4689999999999999888899999999764321 112334556677777654489999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        81 g~L~   84 (316)
T cd05619          81 GDLM   84 (316)
T ss_pred             CcHH
Confidence            9874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.62  E-value=1.1e-14  Score=78.64  Aligned_cols=87  Identities=15%  Similarity=0.224  Sum_probs=73.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc----hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS----TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      +|+..+.||+|++|.||.+.+..++..+++|.+......    ......+.+|+.+++.++ |+|++++++.+...+..+
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~   79 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFN   79 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEE
Confidence            578889999999999999999888999999998754321    112345888999999998 899999999999889999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +++||+++++|.
T Consensus        80 ~v~e~~~~~~L~   91 (268)
T cd06630          80 LFVEWMAGGSVS   91 (268)
T ss_pred             EEEeccCCCcHH
Confidence            999999998874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.62  E-value=1.2e-14  Score=79.16  Aligned_cols=86  Identities=23%  Similarity=0.332  Sum_probs=69.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee-----eCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-----SSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-----~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+.....   ....+.+|+.+++.+.+|+|++++++.+.     ..+.
T Consensus        18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             cceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            578999999999999999999988889999998764321   13456778888888855899999988763     3457


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        95 ~~lv~e~~~~~~L~  108 (286)
T cd06638          95 LWLVLELCNGGSVT  108 (286)
T ss_pred             EEEEEeecCCCCHH
Confidence            89999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.62  E-value=7.9e-15  Score=81.18  Aligned_cols=83  Identities=18%  Similarity=0.199  Sum_probs=65.7

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++....++..+|+|.+...... ....+....+..++....+|||++++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999999888999999999754321 122334555666666554589999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        81 g~L~   84 (316)
T cd05592          81 GDLM   84 (316)
T ss_pred             CcHH
Confidence            9874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.62  E-value=6.6e-15  Score=80.99  Aligned_cols=88  Identities=20%  Similarity=0.229  Sum_probs=70.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc--EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT--QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      ++|++.+.||+|+||.||++.+..++.  .+++|.+.... .......+.+|+.++..+.+|+|++++++.+...+..++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            578899999999999999998876664  35666654322 122345678899999999548999999999998889999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++||+++++|.
T Consensus        86 v~e~~~~~~L~   96 (303)
T cd05088          86 AIEYAPHGNLL   96 (303)
T ss_pred             EEEeCCCCcHH
Confidence            99999998764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1094|consensus

Probab=99.62  E-value=7.7e-16  Score=89.75  Aligned_cols=84  Identities=18%  Similarity=0.347  Sum_probs=72.2

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      ..+.+.||+|.||.|..|.-.. +..+|+|.++...- ...+..|..|+.+|.++. ||||+++++.+..++++++++||
T Consensus       540 L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePicmI~EY  616 (807)
T KOG1094|consen  540 LRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDAT-KNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLCMITEY  616 (807)
T ss_pred             eehhhhhcCcccceeEEEEecC-ceEEEEeecCcccc-hhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchHHHHHH
Confidence            3467899999999999998654 68899999976542 334677999999999998 89999999999999999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      ++.|+|.
T Consensus       617 mEnGDLn  623 (807)
T KOG1094|consen  617 MENGDLN  623 (807)
T ss_pred             HhcCcHH
Confidence            9999874

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.62  E-value=1.3e-14  Score=79.27  Aligned_cols=86  Identities=24%  Similarity=0.373  Sum_probs=72.0

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +++|.+.+.||+|++|.||++.+..++..+++|.+...... .......+|+.+++.++ |+|++++++.+...+..+++
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv   81 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLK-HANIVTLHDIIHTKKTLTLV   81 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCC-CcceeeEEEEEecCCeEEEE
Confidence            47899999999999999999999888899999998654321 11234667999999998 89999999999999999999


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      +||+++ +|
T Consensus        82 ~e~~~~-~L   89 (291)
T cd07844          82 FEYLDT-DL   89 (291)
T ss_pred             EecCCC-CH
Confidence            999985 44

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=9.5e-15  Score=79.19  Aligned_cols=87  Identities=16%  Similarity=0.253  Sum_probs=74.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.+|.|++|.||++.+..++..+++|.+..... ......+.+|+.+++.+. |+|++++.+.+......++++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~   78 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWIIM   78 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEEE
Confidence            468889999999999999999988899999999875432 222345788999999998 899999999998889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 e~~~~~~L~   87 (274)
T cd06609          79 EYCGGGSCL   87 (274)
T ss_pred             EeeCCCcHH
Confidence            999998874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0578|consensus

Probab=99.62  E-value=1.2e-15  Score=87.81  Aligned_cols=86  Identities=15%  Similarity=0.213  Sum_probs=75.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|.....||+|+-|.||.+....++..+|+|.+.......  .+-+.+|+.+|+... |+||+.+++.+...+.+|+|||
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~-H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLH-HPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhcc-chHHHHHHHHhcccceeEEEEe
Confidence            4566678999999999999999999999999998765432  445899999999998 8999999999988899999999


Q ss_pred             ccCCCCCCC
Q psy8005          83 LLDLNHHQA   91 (91)
Q Consensus        83 ~~~~g~L~~   91 (91)
                      |++||+|.+
T Consensus       351 ym~ggsLTD  359 (550)
T KOG0578|consen  351 YMEGGSLTD  359 (550)
T ss_pred             ecCCCchhh
Confidence            999999864

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.62  E-value=1e-14  Score=82.23  Aligned_cols=83  Identities=13%  Similarity=0.290  Sum_probs=69.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----eE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----DM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----~~   77 (91)
                      +|++.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.+. |+|++++++.+...+     ..
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccceE
Confidence            478899999999999999999888999999998654322223456888999999998 899999999887766     78


Q ss_pred             EEEEeccCC
Q psy8005          78 ILLLELLDL   86 (91)
Q Consensus        78 ~lv~e~~~~   86 (91)
                      ++++||+++
T Consensus        80 ~lv~e~~~~   88 (372)
T cd07853          80 YVVTELMQS   88 (372)
T ss_pred             EEEeecccc
Confidence            999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0607|consensus

Probab=99.62  E-value=2.9e-16  Score=86.24  Aligned_cols=85  Identities=25%  Similarity=0.459  Sum_probs=75.6

Q ss_pred             cee-eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           4 TKI-TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         4 ~~~-~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      |++ .+.+|+|+|+.|-.|....++.++|||++++..  ...+..+.+|++.+...++|+||+++.+.|++...+|+|||
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfE  156 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFE  156 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEe
Confidence            444 468999999999999999999999999998763  34466789999999988889999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      -+.||+|.
T Consensus       157 Km~GGplL  164 (463)
T KOG0607|consen  157 KMRGGPLL  164 (463)
T ss_pred             cccCchHH
Confidence            99999985

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.62  E-value=2.7e-14  Score=78.34  Aligned_cols=86  Identities=17%  Similarity=0.235  Sum_probs=73.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.+|+|++|.||++.+..++..+++|.+......  ....+.+|+.+++.+. |+|++++.+.+......++++
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~~~lv~   96 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVM   96 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCEEEEee
Confidence            3678889999999999999998888899999998765432  2455788999999988 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        97 e~~~~~~L~  105 (296)
T cd06654          97 EYLAGGSLT  105 (296)
T ss_pred             cccCCCCHH
Confidence            999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0201|consensus

Probab=99.61  E-value=2.8e-16  Score=88.38  Aligned_cols=86  Identities=16%  Similarity=0.225  Sum_probs=75.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|...+.||+|+||.||++.+..++..+|+|.++..... +..+...+|+.++.++. ++|+.++++.+.....+|++||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~-~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHHHH
Confidence            355678999999999999999999999999999887643 33567889999999998 6999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      ||.||++.
T Consensus        92 y~~gGsv~   99 (467)
T KOG0201|consen   92 YCGGGSVL   99 (467)
T ss_pred             HhcCcchh
Confidence            99999864

>KOG4236|consensus

Probab=99.61  E-value=3.2e-15  Score=86.78  Aligned_cols=82  Identities=27%  Similarity=0.411  Sum_probs=73.0

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      .+.+|+|-||.||-+.++.+|+.+|+|.+++-.+.......+++|+.+++++. ||.|+.+-..+++++.+++|||-+.|
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~-HPGiV~le~M~ET~ervFVVMEKl~G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH-HPGIVNLECMFETPERVFVVMEKLHG  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC-CCCeeEEEEeecCCceEEEEehhhcc
Confidence            46899999999999999999999999999987665554566999999999998 89999999999999999999998876


Q ss_pred             CCC
Q psy8005          87 NHH   89 (91)
Q Consensus        87 g~L   89 (91)
                      .-|
T Consensus       648 DML  650 (888)
T KOG4236|consen  648 DML  650 (888)
T ss_pred             hHH
Confidence            543

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.61  E-value=8.4e-15  Score=78.74  Aligned_cols=84  Identities=17%  Similarity=0.240  Sum_probs=70.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++... .+..+++|.+......   ...+..|+.+++.++ |||++++++.+......+++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~iv~   78 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKPLYIVT   78 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCC-CCCceeEEEEEccCCCEEEEE
Confidence            46888999999999999998764 3457899987644321   345788999999998 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        79 e~~~~~~L~   87 (256)
T cd05114          79 EFMENGCLL   87 (256)
T ss_pred             EcCCCCcHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.61  E-value=2.1e-14  Score=83.63  Aligned_cols=88  Identities=22%  Similarity=0.256  Sum_probs=71.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..+. |+|+++++..+...+      
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~~~~  110 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRNPEN  110 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCC-CCcEEEeecceecccccCccc
Confidence            5789999999999999999999888999999999765543334455788899999888 899999877654322      


Q ss_pred             --eEEEEEeccCCCCCC
Q psy8005          76 --DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 --~~~lv~e~~~~g~L~   90 (91)
                        .++++|||+++|+|.
T Consensus       111 ~~~i~lV~Ey~~~gsL~  127 (496)
T PTZ00283        111 VLMIALVLDYANAGDLR  127 (496)
T ss_pred             ceEEEEEEeCCCCCcHH
Confidence              368999999999874

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.61  E-value=2.5e-14  Score=79.51  Aligned_cols=83  Identities=23%  Similarity=0.370  Sum_probs=67.0

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-----CeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-----~~~   77 (91)
                      .|.+.+.||+|+||.||++.+..++..+++|.+............+.+|+.+++.++ |||++++.+.+...     ...
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~~   79 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKDI   79 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCceE
Confidence            488899999999999999999888999999998753222222345788999999998 89999998876433     247


Q ss_pred             EEEEeccCC
Q psy8005          78 ILLLELLDL   86 (91)
Q Consensus        78 ~lv~e~~~~   86 (91)
                      +++|||+++
T Consensus        80 ~lv~e~~~~   88 (338)
T cd07859          80 YVVFELMES   88 (338)
T ss_pred             EEEEecCCC
Confidence            999999964

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0198|consensus

Probab=99.61  E-value=1.1e-14  Score=80.24  Aligned_cols=85  Identities=19%  Similarity=0.210  Sum_probs=71.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC--eEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMILL   80 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~--~~~lv   80 (91)
                      ++...+.||+|+||.|+.+....++...|+|.+.......  .+.+.+|+.++.+++ ||||+++++......  ..+++
T Consensus        18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEee
Confidence            4677889999999999999999889999999997653211  455889999999999 899999999754444  58999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        95 mEy~~~GsL~  104 (313)
T KOG0198|consen   95 MEYAPGGSLS  104 (313)
T ss_pred             eeccCCCcHH
Confidence            9999999874

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.61  E-value=2e-14  Score=77.68  Aligned_cols=87  Identities=18%  Similarity=0.277  Sum_probs=71.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC---CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|.+.+.||+|+||.||++.....   ...+++|.+..... ......+.+|+.++..++ |+|++++++.+......+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~   81 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFD-HPNIIRLEGVVTKSRPVM   81 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCC-CCCcceEeEEEecCCceE
Confidence            4788999999999999999987543   34789998865432 223456888999999998 899999999998888999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +++||+++++|.
T Consensus        82 iv~e~~~~~~L~   93 (266)
T cd05033          82 IITEYMENGSLD   93 (266)
T ss_pred             EEEEcCCCCCHH
Confidence            999999998874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.60  E-value=1.6e-14  Score=77.45  Aligned_cols=81  Identities=26%  Similarity=0.345  Sum_probs=68.7

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLN   87 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g   87 (91)
                      +.||+|+||.||++....++..+++|.+..... ......+.+|+.+++.++ |||++++.+.+......++++||++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP-PDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCC-HHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            468999999999999988889999998764432 233456889999999998 899999999998888999999999998


Q ss_pred             CCC
Q psy8005          88 HHQ   90 (91)
Q Consensus        88 ~L~   90 (91)
                      +|.
T Consensus        79 ~L~   81 (252)
T cd05084          79 DFL   81 (252)
T ss_pred             cHH
Confidence            874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.60  E-value=9.4e-15  Score=79.08  Aligned_cols=87  Identities=16%  Similarity=0.125  Sum_probs=71.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc--------hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS--------TDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      +|...+.||+|++|.||.+....++..+++|.+......        ....+.+..|+.+++.++ |+|++++++.+...
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~   80 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTE   80 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccC
Confidence            477889999999999999998888889999987542110        112235778899999998 89999999999988


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      +..++++||+++++|.
T Consensus        81 ~~~~lv~e~~~~~~L~   96 (272)
T cd06629          81 EYLSIFLEYVPGGSIG   96 (272)
T ss_pred             CceEEEEecCCCCcHH
Confidence            9999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.60  E-value=1.8e-14  Score=78.82  Aligned_cols=85  Identities=24%  Similarity=0.296  Sum_probs=70.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe-----
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-----   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~-----   76 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+............+.+|+.+++.+.+|+|++++++.+...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            578999999999999999999988899999998865433222334577899999999767999999988876555     


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .++++||+++
T Consensus        81 ~~lv~e~~~~   90 (295)
T cd07837          81 LYLVFEYLDS   90 (295)
T ss_pred             EEEEeeccCc
Confidence            8999999986

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.60  E-value=7.2e-15  Score=79.62  Aligned_cols=89  Identities=20%  Similarity=0.268  Sum_probs=74.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|++|.||++....++..+++|.+....... .....+..+..+++.+.+|+|++++++.+...+..+++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            47999999999999999999998889999999987643221 22345778888898887579999999999888999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||++++++|.
T Consensus        81 ~e~~~~~~L~   90 (280)
T cd05581          81 LEYAPNGELL   90 (280)
T ss_pred             EcCCCCCcHH
Confidence            9999998874

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.60  E-value=2.7e-14  Score=76.75  Aligned_cols=87  Identities=16%  Similarity=0.298  Sum_probs=72.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMILL   80 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~lv   80 (91)
                      +|.+.+.+|.|++|.||++.+..++..+++|.+..........+.+..++..++.++ |+|++++++.+..  ....+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~~   79 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYIV   79 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEEE
Confidence            588899999999999999999888899999998765444444556888999999998 8999999887643  4568999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +||+++++|.
T Consensus        80 ~e~~~~~~L~   89 (265)
T cd08217          80 MEYCEGGDLA   89 (265)
T ss_pred             ehhccCCCHH
Confidence            9999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.60  E-value=1e-14  Score=79.86  Aligned_cols=86  Identities=23%  Similarity=0.395  Sum_probs=72.3

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc---hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +|.+.+.||+|++|.||++.+..++..+++|.+......   ......+..|+.+++.+. |+|++++++.+...+..++
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l   79 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL   79 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence            478889999999999999999888999999999765433   222344678899999998 8999999999998889999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      |+||+ +++|.
T Consensus        80 v~e~~-~~~L~   89 (298)
T cd07841          80 VFEFM-ETDLE   89 (298)
T ss_pred             EEccc-CCCHH
Confidence            99999 77663

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.60  E-value=5.2e-14  Score=76.01  Aligned_cols=89  Identities=19%  Similarity=0.268  Sum_probs=72.3

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc---hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--C
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--H   75 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~   75 (91)
                      +.+|.+.+.||+|+||.||.+.+..++..+++|.+......   ......+.+|+.+++.+. |+|++++.+.+...  .
T Consensus         1 ~~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~   79 (265)
T cd06652           1 PTNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL-HERIVQYYGCLRDPMER   79 (265)
T ss_pred             CCcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC-CCCeeeEEeEeccCCCc
Confidence            46899999999999999999999888999999988643211   122345788999999998 89999999987653  4


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      .+++++||+++++|.
T Consensus        80 ~~~~v~e~~~~~~L~   94 (265)
T cd06652          80 TLSIFMEHMPGGSIK   94 (265)
T ss_pred             eEEEEEEecCCCcHH
Confidence            688999999998874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.60  E-value=1.7e-14  Score=77.99  Aligned_cols=87  Identities=20%  Similarity=0.318  Sum_probs=72.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc---EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      .+|++.+.||+|+||.||++.....+.   .+++|.+.... .......+..|+.+++.+. |||++++++.+......+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~   81 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSRPVM   81 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCC-CcCcceEEEEECCCCceE
Confidence            468899999999999999998765543   68999886542 2333556889999999998 899999999998888999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +++||+++++|.
T Consensus        82 lv~e~~~~~~L~   93 (269)
T cd05065          82 IITEFMENGALD   93 (269)
T ss_pred             EEEecCCCCcHH
Confidence            999999998874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.60  E-value=3.7e-14  Score=75.91  Aligned_cols=87  Identities=21%  Similarity=0.340  Sum_probs=75.7

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||.|++|.||++.+..++..+++|.+............+..|+.+++.++ |+|++++.+.+...+..++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~e   79 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVME   79 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEEE
Confidence            588899999999999999999888899999999776544344566888999999999 8999999999888899999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      ++++++|.
T Consensus        80 ~~~~~~L~   87 (258)
T cd08215          80 YADGGDLS   87 (258)
T ss_pred             ecCCCcHH
Confidence            99998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG1095|consensus

Probab=99.60  E-value=6.3e-15  Score=90.29  Aligned_cols=85  Identities=19%  Similarity=0.210  Sum_probs=70.3

Q ss_pred             ceeeceecCcCeeEEEEEEEccCC-----cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNG-----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      -.+.+.||+|+||.||.|......     ..+++|.+.+... ......|.+|..+++.++ ||||+++.+++-+....+
T Consensus       694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-~~~~~~Fl~Ea~~m~~f~-HpNiv~liGv~l~~~~~~  771 (1025)
T KOG1095|consen  694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-EQEVSDFLKEALLMSKFD-HPNIVSLIGVCLDSGPPL  771 (1025)
T ss_pred             eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC-HHHHHHHHHHHHHHhcCC-CcceeeEEEeecCCCCcE
Confidence            356789999999999999875432     2588898876543 223456999999999999 899999999988888999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +++|||++|+|.
T Consensus       772 i~leyM~gGDL~  783 (1025)
T KOG1095|consen  772 ILLEYMEGGDLL  783 (1025)
T ss_pred             EEehhcccCcHH
Confidence            999999999985

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.60  E-value=2.3e-14  Score=76.96  Aligned_cols=87  Identities=18%  Similarity=0.271  Sum_probs=71.7

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~~~~lv~   81 (91)
                      .|.+.+.||.|++|.||.+.+...+..+++|.+............+.+++.+++.++ |+|++++.+.+.. ....++++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv~   79 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK-HPNIVAYRESWEGEDGLLYIVM   79 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCC-CCCeeeeeeeecCCCCEEEEEe
Confidence            488999999999999999999888889999998765433333455788899999998 8999999887754 44689999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        80 e~~~~~~l~   88 (257)
T cd08223          80 GFCEGGDLY   88 (257)
T ss_pred             cccCCCcHH
Confidence            999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.60  E-value=1.4e-14  Score=79.12  Aligned_cols=87  Identities=17%  Similarity=0.289  Sum_probs=69.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++....     .+..+++|.+..... ......+.+++.+++.++ |+|++++++.+..+..
T Consensus         6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~   83 (288)
T cd05061           6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFT-CHHVVRLLGVVSKGQP   83 (288)
T ss_pred             HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCC
Confidence            468899999999999999986542     234789998764432 222345778999999998 8999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus        84 ~~lv~e~~~~g~L~   97 (288)
T cd05061          84 TLVVMELMAHGDLK   97 (288)
T ss_pred             cEEEEeCCCCCCHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.60  E-value=3.2e-14  Score=77.97  Aligned_cols=86  Identities=17%  Similarity=0.220  Sum_probs=73.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||+|+||.||++.+..++..+++|.+.....  ...+.+.+|+.+++.+. |||++++.+.+...+..++++
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~   95 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWVVM   95 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEEEE
Confidence            468888999999999999999887888999999864322  22455788999999998 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        96 e~~~~~~L~  104 (293)
T cd06647          96 EYLAGGSLT  104 (293)
T ss_pred             ecCCCCcHH
Confidence            999998874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.60  E-value=1.7e-14  Score=78.51  Aligned_cols=83  Identities=22%  Similarity=0.395  Sum_probs=70.7

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|+..+.||.|++|.||++.+..++..+++|.+............+.+|+..++.++ |||++++.+.+...+..++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e   79 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFE   79 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEee
Confidence            588899999999999999999888999999988754332223346788999999998 8999999999998899999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      |+++
T Consensus        80 ~~~~   83 (284)
T cd07860          80 FLHQ   83 (284)
T ss_pred             cccc
Confidence            9864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.60  E-value=5.9e-14  Score=76.67  Aligned_cols=87  Identities=21%  Similarity=0.335  Sum_probs=72.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~l   79 (91)
                      ++|...+.||.|.+|.||.+.+..++..+++|.+..... ......+.+|+.+++.++ |||++++++.+..  .+..++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~l   78 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIGI   78 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEEE
Confidence            478889999999999999999988889999999875432 223456888999999998 8999999987754  346899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++++|.
T Consensus        79 v~e~~~~~~L~   89 (287)
T cd06621          79 AMEYCEGGSLD   89 (287)
T ss_pred             EEEecCCCCHH
Confidence            99999998873

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=4.8e-14  Score=75.86  Aligned_cols=86  Identities=20%  Similarity=0.314  Sum_probs=74.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.+|+|++|.||.+....++..+++|.+......  ..+.+.+|+.+++.++ |||++++++.+...+..+++|
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l~~   79 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECR-HPNIVAYFGSYLRRDKLWIVM   79 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCC-CCChhceEEEEEeCCEEEEEE
Confidence            6789999999999999999998888888999998754322  3456888999999998 899999999998899999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        80 e~~~~~~l~   88 (262)
T cd06613          80 EYCGGGSLQ   88 (262)
T ss_pred             eCCCCCcHH
Confidence            999988764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.60  E-value=4.6e-14  Score=77.48  Aligned_cols=85  Identities=20%  Similarity=0.275  Sum_probs=73.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||.|.+|.||++.+..++..+++|.+......  ....+.+|+.+++.+. |+|++++.+.+...+..++++|
T Consensus        20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELK-NPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcC-CCceeeeeeeEecCceEEEEEE
Confidence            588899999999999999998888999999998654322  2456788999999998 8999999999988899999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        97 ~~~~~~L~  104 (296)
T cd06655          97 YLAGGSLT  104 (296)
T ss_pred             ecCCCcHH
Confidence            99998874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.59  E-value=1.7e-14  Score=79.83  Aligned_cols=83  Identities=20%  Similarity=0.241  Sum_probs=66.6

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|+||.||++.+..++..+|+|.+...... .........|..++....+||+++++++.+...+..+++|||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4689999999999999988999999999764321 112334566777776654489999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        81 g~L~   84 (316)
T cd05620          81 GDLM   84 (316)
T ss_pred             CcHH
Confidence            9874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.59  E-value=1.2e-14  Score=78.25  Aligned_cols=84  Identities=18%  Similarity=0.252  Sum_probs=70.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|++|.||++... .+..+++|.+.....   ..+.+.+|+.+++.++ |+|++++++.+......++++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCcEEEE
Confidence            57899999999999999999864 456789998765322   2456888999999998 899999999988888899999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        81 e~~~~~~L~   89 (261)
T cd05072          81 EYMAKGSLL   89 (261)
T ss_pred             ecCCCCcHH
Confidence            999998874

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0594|consensus

Probab=99.59  E-value=5.9e-15  Score=80.94  Aligned_cols=85  Identities=25%  Similarity=0.446  Sum_probs=71.7

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCC-eeeeheeeeeCC----
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR-IVQLHQVFESSH----   75 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~l~~~~~~~~----   75 (91)
                      |+.|...+.+|+|+||.||++....+|..||+|.+.........+....+|+.+++.++ |+| |+.+++.+.+..    
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~   88 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHRG   88 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhC-CCcceEEEEeeeeecccccc
Confidence            45677788899999999999999999999999999865432333455789999999999 788 999999998877    


Q ss_pred             --eEEEEEeccCC
Q psy8005          76 --DMILLLELLDL   86 (91)
Q Consensus        76 --~~~lv~e~~~~   86 (91)
                        .+++++||++.
T Consensus        89 ~~~l~lvfe~~d~  101 (323)
T KOG0594|consen   89 IGKLYLVFEFLDR  101 (323)
T ss_pred             cceEEEEEEeecc
Confidence              88999999853

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.59  E-value=1.9e-14  Score=79.76  Aligned_cols=82  Identities=22%  Similarity=0.372  Sum_probs=64.7

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHH-HHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVA-VLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +.||+|+||.||++.+...+..+++|.+.+.... ......+..+.. +++.+. |||++++.+.+...+..+++|||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~   79 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLK-HPFLVGLHYSFQTAEKLYFVLDYVN   79 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCEEEEEEcCCC
Confidence            4689999999999999888999999999754321 112233444544 567777 8999999999999999999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +++|.
T Consensus        80 ~~~L~   84 (321)
T cd05603          80 GGELF   84 (321)
T ss_pred             CCCHH
Confidence            99874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.59  E-value=2.7e-14  Score=77.43  Aligned_cols=87  Identities=16%  Similarity=0.268  Sum_probs=71.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-----CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.....     +..+++|.+..... ......+.+++.++..++ |+|++++++.+.....
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~   83 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS-MRERIEFLNEASVMKEFN-CHHVVRLLGVVSTGQP   83 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC-HHHHHHHHHHHHHHHhCC-CCceeEEEEEEcCCCC
Confidence            6788999999999999999887543     36899999865432 223446788999999998 8999999999988899


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++++|.
T Consensus        84 ~~~v~e~~~~~~L~   97 (277)
T cd05032          84 TLVVMELMAKGDLK   97 (277)
T ss_pred             cEEEEecCCCCCHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.59  E-value=1e-14  Score=80.90  Aligned_cols=82  Identities=28%  Similarity=0.341  Sum_probs=66.7

Q ss_pred             ceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCc--hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           8 KSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +.||+|+||.||++...   ..+..+|+|.+......  ......+..|+.+++.++ ||||+++++.+...+..+++||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEe
Confidence            57999999999999763   35778999998754321  112334678999999998 8999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        81 ~~~~~~L~   88 (323)
T cd05584          81 YLSGGELF   88 (323)
T ss_pred             CCCCchHH
Confidence            99999874

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.59  E-value=4.5e-14  Score=79.43  Aligned_cols=85  Identities=20%  Similarity=0.260  Sum_probs=69.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------C
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------~   75 (91)
                      ++|.+.+.||+|+||.||.+.+...+..+++|.+............+.+|+.+++.+. |||++++++.+...      .
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC-CCCccccceeecccccccccC
Confidence            5789999999999999999999888999999998754333333455778999999998 89999998876543      3


Q ss_pred             eEEEEEeccCCC
Q psy8005          76 DMILLLELLDLN   87 (91)
Q Consensus        76 ~~~lv~e~~~~g   87 (91)
                      ..+++|||++++
T Consensus       103 ~~~lv~e~~~~~  114 (364)
T cd07875         103 DVYIVMELMDAN  114 (364)
T ss_pred             eEEEEEeCCCCC
Confidence            579999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.59  E-value=2.5e-14  Score=76.72  Aligned_cols=87  Identities=16%  Similarity=0.219  Sum_probs=72.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc---hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +|+..+.||+|++|.||++....++..+++|.+......   ......+.+|+.+++.+. |+|++++.+.+......++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l   79 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDNLYI   79 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC-CCCchheeeeEecCCeEEE
Confidence            467789999999999999998878899999998654321   123445888999999998 8999999999988889999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++||+++++|.
T Consensus        80 v~e~~~~~~L~   90 (258)
T cd06632          80 FLELVPGGSLA   90 (258)
T ss_pred             EEEecCCCcHH
Confidence            99999998864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.59  E-value=3.3e-14  Score=76.53  Aligned_cols=85  Identities=19%  Similarity=0.256  Sum_probs=71.6

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +++|.+.+.||+|++|.||++... .+..+++|.+......   ...+.+|+.+++.++ |+|++++++.+......+++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v   79 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPIYIV   79 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCC-CCCEeeeeeeeecCCceEEE
Confidence            367899999999999999999865 4567899988754332   346888999999999 89999999998888889999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +|++++++|.
T Consensus        80 ~e~~~~~~L~   89 (261)
T cd05034          80 TEYMSKGSLL   89 (261)
T ss_pred             EeccCCCCHH
Confidence            9999998874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.59  E-value=2.5e-14  Score=76.67  Aligned_cols=87  Identities=16%  Similarity=0.326  Sum_probs=74.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.+|.|++|.+|++.+..++..+++|.+............+..|+.+++.++ |+|++++.+.+......++++|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVME   79 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEeh
Confidence            578899999999999999998888889999998765433333456778999999998 8999999999988899999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        80 ~~~~~~L~   87 (256)
T cd08530          80 YAPFGDLS   87 (256)
T ss_pred             hcCCCCHH
Confidence            99998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.59  E-value=2.2e-14  Score=78.98  Aligned_cols=88  Identities=14%  Similarity=0.195  Sum_probs=70.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++...     ..+..+++|.+..... ....+.+.+|+.+++.+.+|+|++++.+.+...+.
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            46788899999999999998752     2345789998865432 23345688999999999448999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++|+|.
T Consensus       114 ~~lv~e~~~~~~L~  127 (302)
T cd05055         114 ILVITEYCCYGDLL  127 (302)
T ss_pred             eEEEEEcCCCCcHH
Confidence            99999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.58  E-value=8.6e-14  Score=74.49  Aligned_cols=87  Identities=17%  Similarity=0.279  Sum_probs=75.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||+|.+|.+|.+.+...+..+++|.+............+.+++..+..+. |+|++++.+.+......++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e   79 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIILE   79 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEEe
Confidence            478899999999999999998888889999999876543344567889999999998 8999999999988899999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      ++++++|.
T Consensus        80 ~~~~~~L~   87 (254)
T cd06627          80 YAENGSLR   87 (254)
T ss_pred             cCCCCcHH
Confidence            99988764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.58  E-value=1.6e-14  Score=77.87  Aligned_cols=87  Identities=21%  Similarity=0.329  Sum_probs=74.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|...+.||+|++|.||++.+...+..+++|.+..... ......+.+|+..++.+. |||++++++.+......++++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~   78 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICM   78 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEE
Confidence            467888999999999999999988899999999876543 233456888999999998 899999999998889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        79 e~~~~~~L~   87 (265)
T cd06605          79 EYMDGGSLD   87 (265)
T ss_pred             EecCCCcHH
Confidence            999988764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.58  E-value=2.6e-14  Score=79.30  Aligned_cols=82  Identities=22%  Similarity=0.372  Sum_probs=64.5

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHH-HHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVA-VLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +.||+|+||.||++.+..++..+++|.+....... .....+..+.. +++.++ |||++++++.+...+..+++|||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~   79 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTADKLYFVLDYVN   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCC-CCCCCCeeEEEEeCCEEEEEEcCCC
Confidence            46899999999999999899999999997543211 11233444444 456677 8999999999999999999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +|+|.
T Consensus        80 ~g~L~   84 (323)
T cd05575          80 GGELF   84 (323)
T ss_pred             CCCHH
Confidence            99874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.58  E-value=1.4e-14  Score=78.83  Aligned_cols=87  Identities=17%  Similarity=0.235  Sum_probs=71.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC-----cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG-----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|++.+.||+|+||.||.+.....+     ..+++|.+..... ......+.+|+.++..++ |||++++++.+.....
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~   82 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQ-HPNIVCLLGVCTKEQP   82 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcC-CcccceEEEEEcCCCc
Confidence            57889999999999999999865443     5788998864432 233456889999999998 8999999999988888


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++++|.
T Consensus        83 ~~~~~e~~~~~~L~   96 (283)
T cd05048          83 TCMLFEYLAHGDLH   96 (283)
T ss_pred             eEEEEecCCCCcHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0196|consensus

Probab=99.58  E-value=4.6e-15  Score=88.69  Aligned_cols=85  Identities=20%  Similarity=0.326  Sum_probs=72.2

Q ss_pred             ceeeceecCcCeeEEEEEEEccCC---cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ..+.+.||.|.||.|+.+..+..+   ..||+|.++.. .-...+..|+.|..+|.+++ ||||++|-+......++.++
T Consensus       631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTks~PvMIi  708 (996)
T KOG0196|consen  631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTKSKPVMII  708 (996)
T ss_pred             eEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCC-CCcEEEEEEEEecCceeEEE
Confidence            457789999999999999776554   47899998543 33445667999999999999 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      .|||++|+|.
T Consensus       709 TEyMENGsLD  718 (996)
T KOG0196|consen  709 TEYMENGSLD  718 (996)
T ss_pred             hhhhhCCcHH
Confidence            9999999885

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.58  E-value=6.7e-14  Score=76.12  Aligned_cols=84  Identities=18%  Similarity=0.254  Sum_probs=66.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+........ ...+..++..+....+|||++++++.+..++..++++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~   79 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM   79 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence            478999999999999999999998899999999876533222 2334556555333334899999999998888999999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      ||+++
T Consensus        80 e~~~~   84 (283)
T cd06617          80 EVMDT   84 (283)
T ss_pred             hhhcc
Confidence            99974

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.58  E-value=1.2e-14  Score=79.67  Aligned_cols=87  Identities=17%  Similarity=0.334  Sum_probs=70.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC--------------CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN--------------GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL   67 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~--------------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l   67 (91)
                      .+|++.+.||+|+||.||.+.....              ...+++|.+..... ......+.+|+.++..++ |+|++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~-h~~i~~~   82 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLK-NPNIIRL   82 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCC-CCCcCeE
Confidence            3688899999999999999876432              23588998865432 233456889999999998 8999999


Q ss_pred             heeeeeCCeEEEEEeccCCCCCC
Q psy8005          68 HQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        68 ~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      ++.+......+++|||+++++|.
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~  105 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLN  105 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHH
Confidence            99998888999999999998874

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.58  E-value=2.3e-14  Score=77.97  Aligned_cols=83  Identities=23%  Similarity=0.355  Sum_probs=70.3

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||+|.+|.||++.+..++..+++|.+............+.+|+.+++.++ |+|++++.+.+......++++|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e   79 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLYDVLHSDKKLTLVFE   79 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcC-CCCeeeHHHHhccCCceEEEEe
Confidence            478889999999999999999888999999998754332222345677999999998 8999999999999999999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      |+++
T Consensus        80 ~~~~   83 (284)
T cd07839          80 YCDQ   83 (284)
T ss_pred             cCCC
Confidence            9975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.58  E-value=4.8e-15  Score=79.79  Aligned_cols=85  Identities=15%  Similarity=0.222  Sum_probs=72.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||.|++|.||.+.... +..+++|.+.....  .....+..|+..++.++ |+|++++++.+......+++|
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLR-HKHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCC-CcchhheeeeEecCCCeEEEE
Confidence            468889999999999999998877 78899999875432  12446888999999998 899999999998889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        82 e~~~~~~L~   90 (261)
T cd05148          82 ELMEKGSLL   90 (261)
T ss_pred             eecccCCHH
Confidence            999998874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.58  E-value=2.8e-14  Score=80.00  Aligned_cols=86  Identities=21%  Similarity=0.282  Sum_probs=70.0

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------   74 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------   74 (91)
                      +++|++.+.||+|+||.||.+.+...+..+++|.+............+.+|+.+++.++ |||++++++.+...      
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC-CCchhceeeeeecccccccc
Confidence            36789999999999999999999888899999998764433333456778999999998 89999999887543      


Q ss_pred             CeEEEEEeccCCC
Q psy8005          75 HDMILLLELLDLN   87 (91)
Q Consensus        75 ~~~~lv~e~~~~g   87 (91)
                      ...+++|||++++
T Consensus        95 ~~~~lv~e~~~~~  107 (355)
T cd07874          95 QDVYLVMELMDAN  107 (355)
T ss_pred             ceeEEEhhhhccc
Confidence            3579999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.58  E-value=5.6e-14  Score=79.09  Aligned_cols=85  Identities=15%  Similarity=0.019  Sum_probs=65.0

Q ss_pred             CCcceeeceecCcCeeEEEEEEEcc-CCcEEEEEEeccccC---chhHHHHHHHHHHHHHhcCCCCCeee-eheeeeeCC
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRK-NGTQYAAKFLRKKRR---STDLKAEILHEVAVLEACRCNSRIVQ-LHQVFESSH   75 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~-l~~~~~~~~   75 (91)
                      ++.|.+.+.||+|+||.||++.+.. ++..+|+|.+.....   .......+.+|+.+++.+. |+|++. +..    .+
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~----~~   91 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLA----TG   91 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEE----cC
Confidence            4679999999999999999998765 566679998753311   1223445899999999999 788885 433    24


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++++|.
T Consensus        92 ~~~LVmE~~~G~~L~  106 (365)
T PRK09188         92 KDGLVRGWTEGVPLH  106 (365)
T ss_pred             CcEEEEEccCCCCHH
Confidence            579999999998874

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.57  E-value=1.4e-14  Score=78.64  Aligned_cols=86  Identities=16%  Similarity=0.233  Sum_probs=72.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      -|+..+.||+|.+|.||++.+...+..+++|.+..... ......+.+|+..++.++ |+|++++.+.+...+..++++|
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCD-SPYITRYYGSYLKGTKLWIIME   82 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCC-CCccHhhhcccccCCceEEEEE
Confidence            36677889999999999999888888999999875432 223456888999999998 8999999999998999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        83 ~~~~~~L~   90 (277)
T cd06642          83 YLGGGSAL   90 (277)
T ss_pred             ccCCCcHH
Confidence            99998764

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.57  E-value=3e-14  Score=77.43  Aligned_cols=87  Identities=20%  Similarity=0.191  Sum_probs=71.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|++|.||++....     .+..+++|.+..... ......+..|+.+++.++ |+|++++++.+.....
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~   83 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFN-HQNIVRLIGVSFERLP   83 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCC
Confidence            468889999999999999998866     566888998764432 222345888999999998 8999999998888888


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        84 ~~lv~e~~~g~~L~   97 (277)
T cd05036          84 RFILLELMAGGDLK   97 (277)
T ss_pred             cEEEEecCCCCCHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.57  E-value=1e-13  Score=74.23  Aligned_cols=87  Identities=15%  Similarity=0.180  Sum_probs=74.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--CeEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMILL   80 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~~~lv   80 (91)
                      +|...+.||+|++|.+|++.+..++..+++|.+..........+.+.+++..++.++ |+|++++.+.....  ...+++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEEE
Confidence            478889999999999999999888899999998765433334556889999999999 89999999988877  789999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +|++++++|.
T Consensus        80 ~e~~~~~~L~   89 (260)
T cd06606          80 LEYVSGGSLS   89 (260)
T ss_pred             EEecCCCcHH
Confidence            9999988764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.57  E-value=4.9e-14  Score=78.25  Aligned_cols=82  Identities=22%  Similarity=0.366  Sum_probs=64.3

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHH-HHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVA-VLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +.||+|+||.||++.+..++..+++|.+...... ......+..+.. +++.+. |||++++++.+...+..+++|||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-hp~iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTTEKLYFVLDFVN   79 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCccEEEEEecCCEEEEEEcCCC
Confidence            4689999999999999888999999999754321 112233444544 456677 8999999999999999999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +|+|.
T Consensus        80 ~~~L~   84 (325)
T cd05604          80 GGELF   84 (325)
T ss_pred             CCCHH
Confidence            99874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.57  E-value=2.3e-14  Score=77.33  Aligned_cols=84  Identities=20%  Similarity=0.266  Sum_probs=72.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||+|++|.||++.....+..+++|.+.....   ....+.+|+.+++.++ |+|++++++.+...+..+++||
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~---~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e   82 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITE   82 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch---HHHHHHHHHHHHHhCC-CCChhheEEEEcCCCCcEEEEE
Confidence            57788999999999999999988888999999865422   2345888999999998 8999999999988889999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        83 ~~~~~~L~   90 (263)
T cd05052          83 FMTYGNLL   90 (263)
T ss_pred             eCCCCcHH
Confidence            99998874

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.57  E-value=3.5e-14  Score=77.28  Aligned_cols=85  Identities=20%  Similarity=0.352  Sum_probs=71.9

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|++.+.||+|+||.||++.+..++..+++|.+....  ......+.+|+.+++.+. |+|++++.+.+......++++|
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~~v~e   82 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIE   82 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCEEEEEEE
Confidence            3677889999999999999998888888999886542  222455788999999998 8999999999988899999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++++|.
T Consensus        83 ~~~~~~l~   90 (282)
T cd06643          83 FCAGGAVD   90 (282)
T ss_pred             ecCCCcHH
Confidence            99998763

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.57  E-value=3.4e-14  Score=77.17  Aligned_cols=87  Identities=16%  Similarity=0.274  Sum_probs=70.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|++|.||.+....     .+..+++|.+..... ......+.+|+.+++.++ |+|++++++.+.....
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~   83 (277)
T cd05062           6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFN-CHHVVRLLGVVSQGQP   83 (277)
T ss_pred             HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCC
Confidence            468889999999999999987542     345789998754322 223445888999999998 8999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        84 ~~lv~e~~~~~~L~   97 (277)
T cd05062          84 TLVIMELMTRGDLK   97 (277)
T ss_pred             eEEEEecCCCCCHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.57  E-value=1.1e-13  Score=74.74  Aligned_cols=87  Identities=16%  Similarity=0.147  Sum_probs=71.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-------hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-------DLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   75 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~   75 (91)
                      .|.+...||+|++|.||.+.+...+..+++|.+.......       .....+.+|+.+++.++ |||++++.+.+...+
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~   79 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDAD   79 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Confidence            3677889999999999999988888899999886543211       12245778899999998 899999999999889


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..++++||+++++|.
T Consensus        80 ~~~lv~e~~~~~~L~   94 (267)
T cd06628          80 HLNIFLEYVPGGSVA   94 (267)
T ss_pred             ccEEEEEecCCCCHH
Confidence            999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.57  E-value=4.1e-14  Score=76.41  Aligned_cols=84  Identities=23%  Similarity=0.331  Sum_probs=65.9

Q ss_pred             eeeceecCcCeeEEEEEEEc----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           5 KITKSFPLGKYATVRRCRDR----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+.+.||.|.||.|+++...    ..+..+++|.+.... .......+.+++..+..++ |||++++.+.+...+..+++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~-~~~~~~~~~~e~~~l~~l~-h~ni~~~~g~~~~~~~~~lv   79 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS-SEEEEEEFLNEIQILRKLR-HPNIVKLYGFCIENEPLFLV   79 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS-SHHHHHHHHHHHHHHHTHS-BTTBE-EEEEEESSSSEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc-ccccceeeeeccccccccc-cccccccccccccccccccc
Confidence            45789999999999999887    234589999995432 2223567899999999997 89999999999877789999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +||+++|+|.
T Consensus        80 ~e~~~~g~L~   89 (259)
T PF07714_consen   80 MEYCPGGSLD   89 (259)
T ss_dssp             EE--TTEBHH
T ss_pred             cccccccccc
Confidence            9999998874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.56  E-value=3.6e-14  Score=76.26  Aligned_cols=83  Identities=20%  Similarity=0.282  Sum_probs=71.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.+|+|++|.||.+...  +..+++|.+.....   ..+.+.+|+.+++.++ |+|++++++.+...+..+++|
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~   79 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLR-HPNLVQLLGVVLQGNPLYIVT   79 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcC-CcceeeeEEEEcCCCCeEEEE
Confidence            57888999999999999999764  67899999876532   3456888999999998 899999999988888899999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        80 e~~~~~~L~   88 (256)
T cd05039          80 EYMAKGSLV   88 (256)
T ss_pred             EecCCCcHH
Confidence            999988864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.56  E-value=1.4e-13  Score=74.27  Aligned_cols=86  Identities=16%  Similarity=0.174  Sum_probs=70.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc----hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS----TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      +|.+.+.||+|+||.||++.. ..+..+++|.+......    ......+.+|+..++.++ |+|++++.+.+...+..+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~   78 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTIS   78 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEE
Confidence            477889999999999999976 46778999988654221    112345788999999998 899999999999889999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +++||+++++|.
T Consensus        79 lv~e~~~~~~L~   90 (265)
T cd06631          79 IFMEFVPGGSIS   90 (265)
T ss_pred             EEEecCCCCcHH
Confidence            999999998874

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.56  E-value=5.3e-14  Score=77.49  Aligned_cols=88  Identities=13%  Similarity=0.171  Sum_probs=70.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||.+.+..       ....+++|.+..... ......+..|+.++..+..|+|++++++.+...
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            467889999999999999987542       224689998875432 222345778999999995589999999999888


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      +..++++||+++|+|.
T Consensus        97 ~~~~lv~e~~~~~~L~  112 (307)
T cd05098          97 GPLYVIVEYASKGNLR  112 (307)
T ss_pred             CceEEEEecCCCCcHH
Confidence            8999999999998774

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.56  E-value=4.9e-14  Score=76.94  Aligned_cols=87  Identities=23%  Similarity=0.329  Sum_probs=71.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++....     ++..+++|.+..... ......+.+|+.+++.++ |||++++++.+...+.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~-h~~iv~~~~~~~~~~~   82 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFD-HPNIVKLLGVCAVGKP   82 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCc
Confidence            468889999999999999997642     456889998865432 223445888999999998 8999999999988888


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++++|.
T Consensus        83 ~~lv~e~~~~~~L~   96 (288)
T cd05050          83 MCLLFEYMAYGDLN   96 (288)
T ss_pred             cEEEEecCCCCCHH
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG1989|consensus

Probab=99.56  E-value=3.8e-14  Score=84.67  Aligned_cols=85  Identities=19%  Similarity=0.260  Sum_probs=68.8

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheee-ee------CCe
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF-ES------SHD   76 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~------~~~   76 (91)
                      ..+.+.|.+|+|+.||.+.+...+..+|+|.+-..  .....+.+.+|+.+|+.|.+|+|||.+++.. ..      ...
T Consensus        39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            45678999999999999999888789999988654  2333567999999999999999999999832 11      135


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      ++|.||||.+|.|-
T Consensus       117 vllLmEyC~gg~Lv  130 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLV  130 (738)
T ss_pred             EEeehhhccCCcHH
Confidence            78999999988763

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.56  E-value=5.4e-14  Score=78.09  Aligned_cols=82  Identities=22%  Similarity=0.346  Sum_probs=63.5

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHH-HHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVA-VLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +.||+|+||.||++.+..++..+++|.+....... .....+..+.. +++.+. |+||+++++.+...+..+++|||++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~Iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYFVLDYIN   79 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCC-CCCCCceeEEEEcCCeEEEEEeCCC
Confidence            46899999999999998888899999997543211 11223333433 456676 8999999999999999999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +|+|.
T Consensus        80 ~~~L~   84 (325)
T cd05602          80 GGELF   84 (325)
T ss_pred             CCcHH
Confidence            99874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=1.1e-13  Score=75.06  Aligned_cols=87  Identities=18%  Similarity=0.206  Sum_probs=72.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcC--CCCCeeeeheeeeeCCeEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .|+..+.||+|+||.+|++.+..++..+++|.+..... ......+.+|+.+++.+.  .|||++++.+.+......+++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv   80 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII   80 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence            57888999999999999999988889999999865432 222445778888888886  379999999999888899999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus        81 ~e~~~~~~L~   90 (277)
T cd06917          81 MEYAEGGSVR   90 (277)
T ss_pred             EecCCCCcHH
Confidence            9999998874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.56  E-value=8.6e-14  Score=75.27  Aligned_cols=86  Identities=15%  Similarity=0.212  Sum_probs=67.2

Q ss_pred             ceeeceecCcCeeEEEEEEEcc---CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----
Q psy8005           4 TKITKSFPLGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----   75 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----   75 (91)
                      |++.+.||+|+||.||.+....   .+..+++|.+............+.+|+..++.++ |+|++++++.+....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~   79 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQKI   79 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCC-CCCeeeEEeeeccCCccccC
Confidence            5678899999999999998654   3468999998764433333456888999999998 899999988765443     


Q ss_pred             -eEEEEEeccCCCCCC
Q psy8005          76 -DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 -~~~lv~e~~~~g~L~   90 (91)
                       ..++++||+++++|.
T Consensus        80 ~~~~~v~e~~~~~~l~   95 (273)
T cd05035          80 PKPMVILPFMKHGDLH   95 (273)
T ss_pred             cccEEEEeccCCCCHH
Confidence             378999999998863

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.56  E-value=7.3e-14  Score=75.54  Aligned_cols=84  Identities=15%  Similarity=0.133  Sum_probs=70.6

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      ......||+|+||.||++.+..++..+++|.+....  ....+.+.+|+.+++.++ |+|++++.+.+...+..++++||
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~   86 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQ   86 (268)
T ss_pred             CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEEEec
Confidence            344568999999999999988888899999886543  222456888999999998 89999999999988999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus        87 ~~~~~L~   93 (268)
T cd06624          87 VPGGSLS   93 (268)
T ss_pred             CCCCCHH
Confidence            9998874

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.56  E-value=8.8e-14  Score=79.09  Aligned_cols=76  Identities=21%  Similarity=0.241  Sum_probs=66.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ..|.+.+.||+|+||.||.+.+..++..+|+|...        ...+.+|+.+++.++ ||||+++++.+......++++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~  162 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAIN-HPSIIQLKGTFTYNKFTCLIL  162 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCC-CCCCCCEeEEEEECCeeEEEE
Confidence            46899999999999999999999999999999653        224678999999998 899999999999888999999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      |++.+
T Consensus       163 e~~~~  167 (391)
T PHA03212        163 PRYKT  167 (391)
T ss_pred             ecCCC
Confidence            99863

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.56  E-value=4.3e-14  Score=75.81  Aligned_cols=84  Identities=19%  Similarity=0.332  Sum_probs=73.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.+|+|.+|.+|++.....+..+++|.+.....    .+.+.+|+..++.++ |+|++++.+.+......++++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~   77 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCD-SPYIVKYYGSYFKNTDLWIVM   77 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCC-CCcEeeeeeeeecCCcEEEEE
Confidence            578899999999999999999888788999999865421    456889999999997 899999999999889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        78 e~~~~~~L~   86 (256)
T cd06612          78 EYCGAGSVS   86 (256)
T ss_pred             ecCCCCcHH
Confidence            999998774

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.56  E-value=1.6e-13  Score=74.67  Aligned_cols=82  Identities=26%  Similarity=0.442  Sum_probs=69.9

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|++.+.||.|++|.||++.+..++..+++|.+...... .....+.+|+.+++.++ |+|++++++.+...+..++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e   78 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELK-HENIVRLHDVIHTENKLMLVFE   78 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCcEEEEEe
Confidence            588999999999999999999888999999998754321 12334667899999998 8999999999999999999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      |+++
T Consensus        79 ~~~~   82 (284)
T cd07836          79 YMDK   82 (284)
T ss_pred             cCCc
Confidence            9985

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.56  E-value=1.1e-14  Score=89.84  Aligned_cols=80  Identities=20%  Similarity=0.225  Sum_probs=66.1

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      +...+.||+|+||.||++.....+..+|+|.+......      ...++..++.++ ||||+++++++...+..++||||
T Consensus       692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEEEeC
Confidence            44567899999999999998888899999988643211      123477788888 89999999999988899999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++|+|.
T Consensus       765 ~~~g~L~  771 (968)
T PLN00113        765 IEGKNLS  771 (968)
T ss_pred             CCCCcHH
Confidence            9999874

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.55  E-value=9.5e-14  Score=75.05  Aligned_cols=87  Identities=16%  Similarity=0.236  Sum_probs=71.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc---EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|...+.||+|++|.||++.....+.   .+++|.+..... ....+.+..|+.+++.+. |+|++++.+.+...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~   82 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFS-HHNIIRLEGVVTKFKPAM   82 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCC-CCCeeEEEEEEccCCCcE
Confidence            467888999999999999998765443   688888865432 223456888999999998 899999999999888999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus        83 lv~e~~~~~~L~   94 (268)
T cd05063          83 IITEYMENGALD   94 (268)
T ss_pred             EEEEcCCCCCHH
Confidence            999999998873

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.55  E-value=5.1e-14  Score=77.21  Aligned_cols=87  Identities=16%  Similarity=0.349  Sum_probs=69.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc----------------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK----------------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV   65 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~----------------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   65 (91)
                      .+|.+.+.||+|+||.||.+....                .+..+++|.+..... ......+.+|+.+++.+. |+|++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~-~~~i~   82 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLK-DPNII   82 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCC-CCCcc
Confidence            368899999999999999875322                234688888865422 223456889999999998 89999


Q ss_pred             eeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          66 QLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        66 ~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      ++++.+...+..+++|||+++++|.
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~  107 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENGDLN  107 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCCcHH
Confidence            9999998888999999999998874

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.55  E-value=9e-14  Score=75.74  Aligned_cols=86  Identities=21%  Similarity=0.356  Sum_probs=68.2

Q ss_pred             CcceeeceecCcCeeEEEEEEE----ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRD----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~   75 (91)
                      .+|++.+.||+|+||.||.+..    ...+..+++|.+....  ......+.+|+.+++.+. |||++++.+.+..  ..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~   80 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRR   80 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCC-CCCeeEEEEEEccCCCC
Confidence            3678899999999999999863    3457789999986542  222446888999999998 8999999887543  34


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..++++||+++++|.
T Consensus        81 ~~~lv~e~~~~~~L~   95 (284)
T cd05081          81 NLRLVMEYLPYGSLR   95 (284)
T ss_pred             ceEEEEEecCCCCHH
Confidence            689999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.55  E-value=7.1e-14  Score=75.32  Aligned_cols=83  Identities=19%  Similarity=0.263  Sum_probs=68.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++... .+..+++|.+......   ...+.+|+.+++.++ |+|++++++.+. .+..++++
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQ-HPRLVRLYAVVT-QEPIYIIT   79 (260)
T ss_pred             HHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcC-CcCeeeEEEEEc-cCCcEEEE
Confidence            57899999999999999999754 4678999998765432   346788999999998 899999988764 45689999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        80 e~~~~~~L~   88 (260)
T cd05067          80 EYMENGSLV   88 (260)
T ss_pred             EcCCCCCHH
Confidence            999998874

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.55  E-value=5.4e-14  Score=76.12  Aligned_cols=81  Identities=17%  Similarity=0.155  Sum_probs=64.5

Q ss_pred             ceecCcCeeEEEEEEEc--cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +.||+|+||.||++...  ..+..+++|.+...... .....+.+|+.+++.++ |||++++++.+......+++|||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV-QEQMKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFCP   78 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECCC
Confidence            36899999999999754  33457889988654321 22335788999999998 8999999999888888999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +|+|.
T Consensus        79 ~g~L~   83 (269)
T cd05087          79 LGDLK   83 (269)
T ss_pred             CCcHH
Confidence            99874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.55  E-value=4.9e-14  Score=75.83  Aligned_cols=84  Identities=18%  Similarity=0.245  Sum_probs=69.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||+|++|.||.+.+. .+..+++|.+......   ...+.+|+.+++.+. |+|++++++.+...+..++++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRPIFIVT   78 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCceEEEE
Confidence            35788899999999999999765 4567899988654322   335778999999998 899999999988888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 e~~~~~~L~   87 (256)
T cd05059          79 EYMANGCLL   87 (256)
T ss_pred             ecCCCCCHH
Confidence            999998874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.55  E-value=2.8e-13  Score=73.27  Aligned_cols=88  Identities=20%  Similarity=0.302  Sum_probs=71.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch---hHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST---DLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~   76 (91)
                      .+|...+.+|+|++|.||++.+..++..+++|.+.......   .....+.+|+.+++.++ |||++++.+.+..  ...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~   80 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKT   80 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCE
Confidence            37889999999999999999998889999999886543211   22345788999999998 8999999988764  357


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++|++++++|.
T Consensus        81 ~~l~~e~~~~~~L~   94 (266)
T cd06651          81 LTIFMEYMPGGSVK   94 (266)
T ss_pred             EEEEEeCCCCCcHH
Confidence            88999999998874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.55  E-value=1.8e-13  Score=74.80  Aligned_cols=83  Identities=22%  Similarity=0.344  Sum_probs=69.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||+|+||.||.+.+..++..+++|.+...... .......+|+.+++.++ |+|++++.+.+...+..++++
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcC-CCCEeEEEEEEecCCeEEEEE
Confidence            5789999999999999999999888999999998654321 11234667889999998 899999999999888999999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      ||+++
T Consensus        83 e~~~~   87 (291)
T cd07870          83 EYMHT   87 (291)
T ss_pred             ecccC
Confidence            99964

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.55  E-value=7.8e-14  Score=75.63  Aligned_cols=87  Identities=18%  Similarity=0.295  Sum_probs=71.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|+..+.||.|+||.||.+....     ....+++|.+..... ......+.+|+.+++.++ |+|++++++.+.....
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~   82 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLS-HKNVVRLLGLCREAEP   82 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcC-CcceeeeEEEECCCCc
Confidence            578899999999999999998643     234688888765432 223456889999999998 8999999999888888


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        83 ~~lv~e~~~~~~L~   96 (275)
T cd05046          83 HYMILEYTDLGDLK   96 (275)
T ss_pred             ceEEEEecCCCcHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.55  E-value=6.1e-14  Score=77.94  Aligned_cols=82  Identities=13%  Similarity=0.190  Sum_probs=68.4

Q ss_pred             ceecCc--CeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLG--KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g--~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      ..||+|  +|+.||.+.+..++..+++|.+..........+.+.+|+.+++.++ ||||+++++.+...+..++++||++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFR-HPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCcceEeeeEecCCceEEEEeccc
Confidence            456776  8999999999889999999998765433333456788888888888 8999999999999999999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +++|.
T Consensus        83 ~~~l~   87 (328)
T cd08226          83 YGSAN   87 (328)
T ss_pred             CCCHH
Confidence            98764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.55  E-value=1e-13  Score=76.37  Aligned_cols=85  Identities=24%  Similarity=0.357  Sum_probs=69.1

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--CeEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMI   78 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~~~   78 (91)
                      +++|++.+.||+|++|.||++.+..++..+++|.+..............+|+.+++.+. |+|++++.+.+...  +..+
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCeEE
Confidence            46899999999999999999999888999999998754322222334567999999998 89999999887644  4689


Q ss_pred             EEEeccCC
Q psy8005          79 LLLELLDL   86 (91)
Q Consensus        79 lv~e~~~~   86 (91)
                      +++||+++
T Consensus        85 lv~e~~~~   92 (309)
T cd07845          85 LVMEYCEQ   92 (309)
T ss_pred             EEEecCCC
Confidence            99999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.55  E-value=8.6e-14  Score=76.34  Aligned_cols=84  Identities=21%  Similarity=0.368  Sum_probs=69.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      ++|++.+.+|+|++|.||++.....+..+++|.+............+.+|+.+++.++ |||++++++.+....      
T Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~~~~~   85 (302)
T cd07864           7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN-HRNIVNLKEIVTDKQDALDFK   85 (302)
T ss_pred             hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC-CCCeeeeeheecCcchhhhcc
Confidence            5789999999999999999999888899999998754322223345778999999998 899999988876544      


Q ss_pred             ----eEEEEEeccCC
Q psy8005          76 ----DMILLLELLDL   86 (91)
Q Consensus        76 ----~~~lv~e~~~~   86 (91)
                          ..++++||+++
T Consensus        86 ~~~~~~~lv~e~~~~  100 (302)
T cd07864          86 KDKGAFYLVFEYMDH  100 (302)
T ss_pred             ccCCcEEEEEcccCc
Confidence                78999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.55  E-value=4.9e-14  Score=77.32  Aligned_cols=88  Identities=19%  Similarity=0.227  Sum_probs=70.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc--EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT--QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      ++|++.+.||+|+||.||++.....+.  .+++|.+.... .....+.+.+|+.++..+.+|||++++++.+...+..++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l   80 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI   80 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence            689999999999999999998766554  46777765322 122345688899999998558999999999988888999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++||+++++|.
T Consensus        81 v~e~~~~~~L~   91 (297)
T cd05089          81 AIEYAPYGNLL   91 (297)
T ss_pred             EEEecCCCcHH
Confidence            99999998874

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.55  E-value=6.9e-14  Score=76.43  Aligned_cols=88  Identities=26%  Similarity=0.347  Sum_probs=71.6

Q ss_pred             cceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCc--hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +|++.+.||+|+||.||.+...   .++..+++|.+......  ......+..|+.++..+.+|++++++.+.+..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            5888999999999999998764   36788999998754321  122345778899999997689999999999888899


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++||+++++|.
T Consensus        81 ~lv~e~~~~~~L~   93 (290)
T cd05613          81 HLILDYINGGELF   93 (290)
T ss_pred             EEEEecCCCCcHH
Confidence            9999999998874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=2.8e-13  Score=73.22  Aligned_cols=88  Identities=20%  Similarity=0.309  Sum_probs=71.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC---chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--Ce
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR---STDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~   76 (91)
                      ++|.+.+.||+|++|.||++.+..++..+++|.+.....   .......+.+|+.+++.++ |+|++++.+.+...  ..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCE
Confidence            579999999999999999999988899999998754211   1122345888999999998 89999999887653  46


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++|++++++|.
T Consensus        81 ~~~v~e~~~~~~L~   94 (264)
T cd06653          81 LSIFVEYMPGGSIK   94 (264)
T ss_pred             EEEEEEeCCCCcHH
Confidence            88999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.55  E-value=4.1e-14  Score=76.84  Aligned_cols=87  Identities=15%  Similarity=0.218  Sum_probs=71.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++....     .+..+++|.+..... ....+.+.+|+.++..+. |+|++++++.+.....
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~   82 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQ-HENIVKFYGVCTEGDP   82 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcC-CCCchheeeEEecCCC
Confidence            468888999999999999997643     346799998865432 223456889999999998 8999999999998899


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        83 ~~lv~e~~~~~~L~   96 (280)
T cd05049          83 PIMVFEYMEHGDLN   96 (280)
T ss_pred             eEEEEecCCCCCHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0199|consensus

Probab=99.54  E-value=2.5e-15  Score=89.24  Aligned_cols=84  Identities=18%  Similarity=0.275  Sum_probs=70.1

Q ss_pred             eeeceecCcCeeEEEEEEEccCC---cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           5 KITKSFPLGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+.+.||+|.||.|+++.+...+   ..||||++....... ....|++|+.+|..+. |+|+++|++...+ ..+.||+
T Consensus       113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~mMV~  189 (1039)
T KOG0199|consen  113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPAMMVF  189 (1039)
T ss_pred             HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhcc-CcceeEEeeeecc-chhhHHh
Confidence            45678999999999999887543   378999997665432 4567999999999999 8999999999876 6789999


Q ss_pred             eccCCCCCCC
Q psy8005          82 ELLDLNHHQA   91 (91)
Q Consensus        82 e~~~~g~L~~   91 (91)
                      |+++.|+|.+
T Consensus       190 ELaplGSLld  199 (1039)
T KOG0199|consen  190 ELAPLGSLLD  199 (1039)
T ss_pred             hhcccchHHH
Confidence            9999999863

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.54  E-value=6.6e-14  Score=75.48  Aligned_cols=84  Identities=17%  Similarity=0.267  Sum_probs=70.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|++|.||++.... +..+++|.+......   .+.+.+|+.+++.++ |+|++++++.+...+..++++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMD---PKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCccc---HHHHHHHHHHHHHCC-CCCccceeEEEecCCCeeeee
Confidence            468889999999999999998643 567999998654321   345788999999998 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        81 e~~~~~~L~   89 (261)
T cd05068          81 ELMKYGSLL   89 (261)
T ss_pred             ecccCCcHH
Confidence            999988874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.54  E-value=6.3e-14  Score=76.67  Aligned_cols=84  Identities=23%  Similarity=0.365  Sum_probs=69.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--CeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~~~l   79 (91)
                      ++|.+.+.||+|.+|.||++.+..++..+++|.+............+.+|+.++..+. |||++++.+.+...  ...++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~l   83 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIYM   83 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEEE
Confidence            5788899999999999999999888889999999754332222334667899999998 89999999888776  78999


Q ss_pred             EEeccCC
Q psy8005          80 LLELLDL   86 (91)
Q Consensus        80 v~e~~~~   86 (91)
                      ++||+++
T Consensus        84 v~e~~~~   90 (293)
T cd07843          84 VMEYVEH   90 (293)
T ss_pred             EehhcCc
Confidence            9999974

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.54  E-value=6.1e-14  Score=75.53  Aligned_cols=84  Identities=18%  Similarity=0.252  Sum_probs=69.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|++|.||.+.... +..+++|.+......   ...+.+|+..+..++ |||++++++.+......+++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRPIYIVT   78 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCC-CCCeeeEEEEEccCCCcEEEE
Confidence            468889999999999999997643 446899988654321   345788999999998 899999999998888899999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 e~~~~~~l~   87 (256)
T cd05113          79 EYMSNGCLL   87 (256)
T ss_pred             EcCCCCcHH
Confidence            999988764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.54  E-value=1.1e-13  Score=74.79  Aligned_cols=86  Identities=20%  Similarity=0.251  Sum_probs=71.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      ++|.+.+.||+|++|.+|.+.+...+..+++|.+.....   ....+.+|+.+++.+..|+|++++++.+....      
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            578999999999999999999988888999999875432   23458889999999855899999999886544      


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..++++||+++++|.
T Consensus        83 ~~~lv~e~~~~~~L~   97 (275)
T cd06608          83 QLWLVMELCGGGSVT   97 (275)
T ss_pred             EEEEEEEcCCCCcHH
Confidence            489999999998764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.54  E-value=9.2e-14  Score=75.77  Aligned_cols=86  Identities=21%  Similarity=0.341  Sum_probs=68.9

Q ss_pred             cceeeceecCcCeeEEEEEEE----ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--Ce
Q psy8005           3 NTKITKSFPLGKYATVRRCRD----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HD   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~   76 (91)
                      .|++.+.||+|+||.||.+..    ...+..+++|.+..... ......+.+|+.+++.+. |+|++++.+.+...  ..
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHHHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCCc
Confidence            467889999999999999874    34567899999864432 233456889999999998 89999999887664  56


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        83 ~~lv~e~~~g~~L~   96 (284)
T cd05079          83 IKLIMEFLPSGSLK   96 (284)
T ss_pred             eEEEEEccCCCCHH
Confidence            89999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.54  E-value=1.5e-13  Score=74.70  Aligned_cols=80  Identities=29%  Similarity=0.427  Sum_probs=66.3

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNH   88 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~   88 (91)
                      ||+|+||.||.+.+..++..+++|.+....... .....+..|+.+++.+. |||++++.+.+...+..++++||+++++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD   79 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence            689999999999988889999999987543221 12234677999999998 8999999999988899999999999988


Q ss_pred             CC
Q psy8005          89 HQ   90 (91)
Q Consensus        89 L~   90 (91)
                      |.
T Consensus        80 L~   81 (277)
T cd05577          80 LK   81 (277)
T ss_pred             HH
Confidence            74

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.54  E-value=1.6e-13  Score=75.07  Aligned_cols=88  Identities=13%  Similarity=0.195  Sum_probs=70.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-----CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|++.+.||+|++|.||++.....     ...+++|.+..... ......+.+|+.++..+.+|+|++++++.+.....
T Consensus        12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   90 (293)
T cd05053          12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP   90 (293)
T ss_pred             hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence            4688889999999999999976533     35789998865432 22234578899999998448999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus        91 ~~li~e~~~~~~L~  104 (293)
T cd05053          91 LYVVVEYAAHGNLR  104 (293)
T ss_pred             eEEEEEeCCCCcHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.54  E-value=3.5e-13  Score=73.69  Aligned_cols=86  Identities=22%  Similarity=0.320  Sum_probs=69.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-----Ce
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-----~~   76 (91)
                      ++|.+.+.||+|+||.||++....++..+++|.+.....   ....+.+++.+++.+.+|||++++++.+...     ..
T Consensus        22 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~   98 (291)
T cd06639          22 DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQ   98 (291)
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCe
Confidence            568999999999999999999988889999999865321   1345667888888885589999999887643     35


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++++|.
T Consensus        99 ~~lv~ey~~~~sL~  112 (291)
T cd06639          99 LWLVLELCNGGSVT  112 (291)
T ss_pred             eEEEEEECCCCcHH
Confidence            89999999998874

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.54  E-value=1.5e-13  Score=74.92  Aligned_cols=85  Identities=20%  Similarity=0.343  Sum_probs=73.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|...+.+++|.+|.||.+.+...+..+++|.+.....   ....+.+|+..++.+. |+|++++++.+...+..++++
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCK-HPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCC-CCCeeEEEEEEEECCEEEEEE
Confidence            357778899999999999999987888999999875532   2445788999999998 799999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        95 e~~~~~~L~  103 (286)
T cd06614          95 EYMDGGSLT  103 (286)
T ss_pred             eccCCCcHH
Confidence            999988874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.53  E-value=2.1e-13  Score=76.25  Aligned_cols=86  Identities=22%  Similarity=0.304  Sum_probs=68.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      ++|++.+.||+|++|.||++.+..++..+++|.+............+.+|+.+++.+. |+|++++.+.+....      
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07880          15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK-HENVIGLLDVFTPDLSLDRFH   93 (343)
T ss_pred             cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC-CCCccceeeeecCCccccccc
Confidence            5789999999999999999999888999999998654322233455788999999998 899999998876543      


Q ss_pred             eEEEEEeccCCCCC
Q psy8005          76 DMILLLELLDLNHH   89 (91)
Q Consensus        76 ~~~lv~e~~~~g~L   89 (91)
                      ..++++|++ +++|
T Consensus        94 ~~~lv~e~~-~~~l  106 (343)
T cd07880          94 DFYLVMPFM-GTDL  106 (343)
T ss_pred             eEEEEEecC-CCCH
Confidence            358999998 4443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0608|consensus

Probab=99.53  E-value=9.5e-15  Score=86.31  Aligned_cols=86  Identities=20%  Similarity=0.269  Sum_probs=73.9

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      |..++.||-|+||.|..+....+...||+|.+.+...- .....++..|-.+|...+ +++|++|+..|.+.+.+|+|||
T Consensus       631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCceEEEEe
Confidence            55688999999999999988888888999999876432 223456889999999999 6999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |++||++.
T Consensus       710 YIPGGDmM  717 (1034)
T KOG0608|consen  710 YIPGGDMM  717 (1034)
T ss_pred             ccCCccHH
Confidence            99999874

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.53  E-value=1.9e-13  Score=74.83  Aligned_cols=87  Identities=17%  Similarity=0.303  Sum_probs=71.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC----------------cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG----------------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV   65 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~----------------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   65 (91)
                      .+|.+.+.||+|+||.||.+.....+                ..+++|.+..... ......+.+|+.+++.+. |||++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~   82 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDFLKEVKILSRLS-DPNIA   82 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhcC-CCCEe
Confidence            57889999999999999998765432                3578898865432 233456888999999998 89999


Q ss_pred             eeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          66 QLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        66 ~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      ++++.+...+..++++|++++++|.
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~  107 (296)
T cd05051          83 RLLGVCTVDPPLCMIMEYMENGDLN  107 (296)
T ss_pred             EEEEEEecCCCcEEEEecCCCCCHH
Confidence            9999998888999999999988764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.53  E-value=7.1e-14  Score=76.87  Aligned_cols=88  Identities=13%  Similarity=0.196  Sum_probs=69.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-------cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-------KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||.+...       ..+..+++|.+..... ......+.+|+.+++.+.+|||++++.+.+...
T Consensus        15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            46788999999999999988642       1234688898864321 222456888999999995589999999999888


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      ...+++|||+++++|.
T Consensus        94 ~~~~lv~e~~~~~~L~  109 (304)
T cd05101          94 GPLYVIVEYASKGNLR  109 (304)
T ss_pred             CceEEEEecCCCCcHH
Confidence            8999999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.53  E-value=2e-13  Score=74.67  Aligned_cols=86  Identities=16%  Similarity=0.286  Sum_probs=68.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccC-----CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +|++.+.||+|+||.||++.....     ...+++|.+..... ......+.+|+.+++.++ |||++++++.+...+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~   78 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVN-HPHVIKLYGACSQDGPL   78 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCCc
Confidence            478889999999999999976432     24678887764432 222346888999999998 89999999999888899


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++||+++++|.
T Consensus        79 ~lv~e~~~~~~L~   91 (290)
T cd05045          79 LLIVEYAKYGSLR   91 (290)
T ss_pred             EEEEEecCCCCHH
Confidence            9999999998874

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.53  E-value=1.3e-13  Score=74.91  Aligned_cols=87  Identities=23%  Similarity=0.367  Sum_probs=69.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~   75 (91)
                      .+|++.+.||+|+||.||++....    .+..+++|.+...... .....+..|+..++.+. |+|++++.+.+..  ..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~~~   81 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLD-HENIVKYKGVCEKPGGR   81 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCC-CCChheEEeeeecCCCC
Confidence            357788999999999999997543    3678999998765432 23456889999999998 8999999888766  45


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..++++||+++++|.
T Consensus        82 ~~~lv~e~~~~~~l~   96 (284)
T cd05038          82 SLRLIMEYLPSGSLR   96 (284)
T ss_pred             ceEEEEecCCCCCHH
Confidence            789999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.52  E-value=2.5e-13  Score=74.63  Aligned_cols=85  Identities=15%  Similarity=0.270  Sum_probs=67.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----   75 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----   75 (91)
                      +++|.+.+.||+|++|.||++.+..++..+++|.+..............+|+.+++.+. |||++++++.+....     
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC-CCCccceEEEEecccccccC
Confidence            46789999999999999999999888999999988654322222334567899999998 899999988765443     


Q ss_pred             ---eEEEEEeccCC
Q psy8005          76 ---DMILLLELLDL   86 (91)
Q Consensus        76 ---~~~lv~e~~~~   86 (91)
                         ..++++||+++
T Consensus        90 ~~~~~~lv~e~~~~  103 (310)
T cd07865          90 YKGSFYLVFEFCEH  103 (310)
T ss_pred             CCceEEEEEcCCCc
Confidence               45999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.52  E-value=3.9e-13  Score=72.24  Aligned_cols=84  Identities=17%  Similarity=0.226  Sum_probs=70.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|++|.||++.+. .+..+++|.+......   ...+.+|+.+++.++ ||+++++++.+......++++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLS-HPKLVQLYGVCTERSPICLVF   78 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCC-CCCeeeEEEEEccCCceEEEE
Confidence            46888999999999999999775 3667899988654332   345788999999998 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 e~~~~~~L~   87 (256)
T cd05112          79 EFMEHGCLS   87 (256)
T ss_pred             EcCCCCcHH
Confidence            999998764

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.52  E-value=9.9e-14  Score=75.45  Aligned_cols=79  Identities=13%  Similarity=0.201  Sum_probs=61.5

Q ss_pred             eecCcCeeEEEEEEEcc------------------------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCe
Q psy8005           9 SFPLGKYATVRRCRDRK------------------------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRI   64 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~~~------------------------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   64 (91)
                      .||+|+||.||++....                        ....+++|.+....  ......+..+..+++.++ |||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~-h~ni   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVS-HIHL   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCC-CCCe
Confidence            68999999999886321                        11357888876432  222345777888899898 8999


Q ss_pred             eeeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          65 VQLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        65 ~~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      +++++.+...+..++||||+++|+|.
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~  104 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLD  104 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHH
Confidence            99999998888999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.52  E-value=1.7e-13  Score=74.18  Aligned_cols=85  Identities=19%  Similarity=0.248  Sum_probs=69.0

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------Ce
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------HD   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------~~   76 (91)
                      .|.+.+.||+|+||.||.+.....+..+++|.+......   ...+..|+..+..+.+|+|++++.+.+...      ..
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (272)
T cd06637           7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ   83 (272)
T ss_pred             hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence            477788999999999999999888899999998654321   345778888888885589999999887642      45


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++++|.
T Consensus        84 ~~iv~e~~~~~~L~   97 (272)
T cd06637          84 LWLVMEFCGAGSVT   97 (272)
T ss_pred             EEEEEEcCCCCcHH
Confidence            89999999998774

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.52  E-value=1.9e-13  Score=73.25  Aligned_cols=80  Identities=20%  Similarity=0.285  Sum_probs=65.9

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLN   87 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g   87 (91)
                      +.||+|+||.||++... .+..+++|.+..... ......+.+|+.+++.+. |||++++.+.+......+++|||++++
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP-QELKIKFLSEARILKQYD-HPNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCC-CCCcCeEEEEEecCCccEEEEECCCCC
Confidence            36899999999999754 577899998865432 233445888999999998 899999999998888999999999998


Q ss_pred             CCC
Q psy8005          88 HHQ   90 (91)
Q Consensus        88 ~L~   90 (91)
                      +|.
T Consensus        78 ~L~   80 (250)
T cd05085          78 DFL   80 (250)
T ss_pred             cHH
Confidence            874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.52  E-value=1.7e-13  Score=74.90  Aligned_cols=86  Identities=15%  Similarity=0.240  Sum_probs=69.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.+|+|+||.||.+...     ..+..+++|.+....  ......+.+|+.+++.+. |+|++++++.+...+.
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~   81 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGDP   81 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCc
Confidence            46888999999999999998752     234568888876432  223456889999999998 8999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++++|.
T Consensus        82 ~~lv~e~~~~~~L~   95 (288)
T cd05093          82 LIMVFEYMKHGDLN   95 (288)
T ss_pred             cEEEEEcCCCCCHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.52  E-value=3.3e-13  Score=73.41  Aligned_cols=86  Identities=23%  Similarity=0.286  Sum_probs=69.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      .+|++.+.||+|+||.||++....++.    .+++|.+..... ......+.+|+..++.++ |+|++++++.+.. ...
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~~   83 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVD-HPHVVRLLGICLS-SQV   83 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCC-CCCcceEEEEEec-Cce
Confidence            468889999999999999998765543    578888765533 223456888999999998 8999999998876 678


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++||+++|+|.
T Consensus        84 ~~v~e~~~~g~L~   96 (279)
T cd05057          84 QLITQLMPLGCLL   96 (279)
T ss_pred             EEEEecCCCCcHH
Confidence            9999999998874

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.52  E-value=2.7e-13  Score=75.53  Aligned_cols=87  Identities=13%  Similarity=0.173  Sum_probs=69.0

Q ss_pred             cceeeceecCcCeeEEEEEEEccC-------CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKN-------GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   75 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~   75 (91)
                      +|.+.+.||+|+||.||.+.+...       ...+++|.+..... ......+.+|+.+++.+..|+|++++++.+...+
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT-DKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC-HHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            578889999999999999975432       23688898764322 2234568889999999944899999999998888


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..++++||+++|+|.
T Consensus        92 ~~~lv~e~~~~g~L~  106 (334)
T cd05100          92 PLYVLVEYASKGNLR  106 (334)
T ss_pred             ceEEEEecCCCCcHH
Confidence            899999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.51  E-value=1.2e-13  Score=77.11  Aligned_cols=86  Identities=17%  Similarity=0.221  Sum_probs=67.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------C
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------~   75 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.+. |+|++++++++...      .
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK-HENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC-CCchhhhhhhhcccccccccC
Confidence            5788999999999999999999888899999998754322223345778999999998 89999998877533      3


Q ss_pred             eEEEEEeccCCCCC
Q psy8005          76 DMILLLELLDLNHH   89 (91)
Q Consensus        76 ~~~lv~e~~~~g~L   89 (91)
                      ..+++++++ +++|
T Consensus        94 ~~~~~~~~~-~~~l  106 (343)
T cd07878          94 EVYLVTNLM-GADL  106 (343)
T ss_pred             cEEEEeecC-CCCH
Confidence            468999987 4444

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.51  E-value=1.4e-13  Score=75.16  Aligned_cols=88  Identities=26%  Similarity=0.342  Sum_probs=70.9

Q ss_pred             cceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCc--hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +|.+.+.||+|++|.||++...   ..+..+++|.+......  ......+..|+.++..+.+|++++++.+.+......
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            5788999999999999998754   34678999998654321  122345778999999997689999999999888899


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++||+++++|.
T Consensus        81 ~lv~e~~~~~~L~   93 (288)
T cd05583          81 HLILDYVNGGELF   93 (288)
T ss_pred             EEEEecCCCCcHH
Confidence            9999999998874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.51  E-value=3.8e-13  Score=74.39  Aligned_cols=88  Identities=15%  Similarity=0.208  Sum_probs=69.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||++....       ....+++|.+..... ......+..|+.+++.+..|||++++.+.+...
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            467889999999999999987532       234688888764322 223445788999999985589999999998888


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      ...++++||+++|+|.
T Consensus        91 ~~~~lv~e~~~~g~L~  106 (314)
T cd05099          91 GPLYVIVEYAAKGNLR  106 (314)
T ss_pred             CceEEEEecCCCCcHH
Confidence            8899999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.51  E-value=2.6e-13  Score=73.14  Aligned_cols=80  Identities=21%  Similarity=0.360  Sum_probs=68.3

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNH   88 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~   88 (91)
                      ||.|++|.||.+.+..++..+++|.+...... ....+.+.+|+.+++.++ |||++++.+.+......++++||+++++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGE   79 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence            68999999999999888899999999765432 223456889999999998 8999999999988889999999999988


Q ss_pred             CC
Q psy8005          89 HQ   90 (91)
Q Consensus        89 L~   90 (91)
                      |.
T Consensus        80 L~   81 (262)
T cd05572          80 LW   81 (262)
T ss_pred             HH
Confidence            74

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.51  E-value=4.2e-13  Score=73.99  Aligned_cols=84  Identities=21%  Similarity=0.427  Sum_probs=69.1

Q ss_pred             cceeeceecCcCeeEEEEEEEcc--CCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--CeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRK--NGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~~   77 (91)
                      .|.+.+.||+|++|.||++.+..  .+..+++|.+..... .........+|+.++..++ |||++++++.+...  ...
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~   79 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK-HENVVSLVEVFLEHADKSV   79 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceE
Confidence            37888999999999999999887  788999999976431 1122345778899999998 89999999998877  789


Q ss_pred             EEEEeccCCC
Q psy8005          78 ILLLELLDLN   87 (91)
Q Consensus        78 ~lv~e~~~~g   87 (91)
                      ++++||+++.
T Consensus        80 ~lv~e~~~~~   89 (316)
T cd07842          80 YLLFDYAEHD   89 (316)
T ss_pred             EEEEeCCCcC
Confidence            9999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.51  E-value=1.6e-13  Score=75.96  Aligned_cols=86  Identities=23%  Similarity=0.260  Sum_probs=68.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      .+|+..+.||+|+||.||++.....+.    .+++|.+..... ....+.+..|+.+++.+. |||++++++.+... ..
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~g~~~~~-~~   83 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD-NPHVCRLLGICLTS-TV   83 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC-HHHHHHHHHHHHHHHhCC-CCCCCeEEEEEcCC-Cc
Confidence            478899999999999999998755444    488998864322 233456888999999998 89999999987654 46


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++|++++|+|.
T Consensus        84 ~~v~e~~~~g~l~   96 (316)
T cd05108          84 QLITQLMPFGCLL   96 (316)
T ss_pred             eeeeecCCCCCHH
Confidence            7999999999874

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG4278|consensus

Probab=99.51  E-value=1.5e-14  Score=85.59  Aligned_cols=81  Identities=21%  Similarity=0.257  Sum_probs=72.7

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      ...||-|-||.||.+.+......+|||.+....+.   .++|+.|..+|+.+. |||+++|++.+.-..++|||.|||.+
T Consensus       272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe---veEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiTEfM~y  347 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIITEFMCY  347 (1157)
T ss_pred             eeccCCCcccceeeeeeeccceeeehhhhhhcchh---HHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEEecccC
Confidence            46899999999999999999999999999776543   667999999999999 89999999999888899999999999


Q ss_pred             CCCCC
Q psy8005          87 NHHQA   91 (91)
Q Consensus        87 g~L~~   91 (91)
                      |.|.+
T Consensus       348 GNLLd  352 (1157)
T KOG4278|consen  348 GNLLD  352 (1157)
T ss_pred             ccHHH
Confidence            98853

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.51  E-value=3.3e-13  Score=73.49  Aligned_cols=85  Identities=20%  Similarity=0.255  Sum_probs=68.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee------CCe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------SHD   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~------~~~   76 (91)
                      .|.+.+.+|+|+||.||.+.+...+..+++|.+....   .....+..++.++..+.+|+|++++++.+..      ...
T Consensus        17 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   93 (282)
T cd06636          17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ   93 (282)
T ss_pred             hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence            5778889999999999999998888999999886542   1234577788888888558999999888742      457


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus        94 ~~iv~e~~~~~~L~  107 (282)
T cd06636          94 LWLVMEFCGAGSVT  107 (282)
T ss_pred             EEEEEEeCCCCcHH
Confidence            89999999998774

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.51  E-value=2.2e-13  Score=73.10  Aligned_cols=81  Identities=20%  Similarity=0.298  Sum_probs=68.9

Q ss_pred             ceecCcCeeEEEEEEEccC---CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEecc
Q psy8005           8 KSFPLGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   84 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~   84 (91)
                      +.||+|+||.||++.....   +..+++|.+....... ....+.+|+..+..++ |+|++++++.+......++++||+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEec
Confidence            4689999999999998765   7889999997654322 3456889999999999 899999999998888999999999


Q ss_pred             CCCCCC
Q psy8005          85 DLNHHQ   90 (91)
Q Consensus        85 ~~g~L~   90 (91)
                      ++++|.
T Consensus        79 ~~~~L~   84 (262)
T cd00192          79 EGGDLL   84 (262)
T ss_pred             cCCcHH
Confidence            999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.51  E-value=3.4e-13  Score=77.69  Aligned_cols=79  Identities=11%  Similarity=0.127  Sum_probs=63.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-------   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-------   74 (91)
                      .+|.+.+.||+|+||.||++....++..+|+|.+....      ....+|+.+++.+. |+|++++.+.+...       
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~~~~  138 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLN-HINIIFLKDYYYTECFKKNEK  138 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcC-CCCCcceeeeEeecccccCCC
Confidence            36889999999999999999998889999999885432      12346889999998 89999987765321       


Q ss_pred             -CeEEEEEeccCCC
Q psy8005          75 -HDMILLLELLDLN   87 (91)
Q Consensus        75 -~~~~lv~e~~~~g   87 (91)
                       ..++++|||++++
T Consensus       139 ~~~l~lvmE~~~~~  152 (440)
T PTZ00036        139 NIFLNVVMEFIPQT  152 (440)
T ss_pred             ceEEEEEEecCCcc
Confidence             2567999999864

>KOG0660|consensus

Probab=99.51  E-value=8.1e-14  Score=76.94  Aligned_cols=81  Identities=22%  Similarity=0.372  Sum_probs=67.8

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-----CCeEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-----SHDMI   78 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-----~~~~~   78 (91)
                      |...+.||.|+||.|+.+.+..++..+|+|.+...-......++..+|+.+++.+. |+||+.+.+.+..     -..+|
T Consensus        24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~~f~DvY  102 (359)
T KOG0660|consen   24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRDKFNDVY  102 (359)
T ss_pred             ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc-CCCcceEEeecccccccccceeE
Confidence            44578999999999999999999999999999754333334567899999999999 8999999998865     34799


Q ss_pred             EEEeccC
Q psy8005          79 LLLELLD   85 (91)
Q Consensus        79 lv~e~~~   85 (91)
                      +|+|+++
T Consensus       103 iV~elMe  109 (359)
T KOG0660|consen  103 LVFELME  109 (359)
T ss_pred             EehhHHh
Confidence            9999984

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.51  E-value=2e-13  Score=73.93  Aligned_cols=81  Identities=19%  Similarity=0.183  Sum_probs=63.1

Q ss_pred             ceecCcCeeEEEEEEEcc--CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLGKYATVRRCRDRK--NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +.||+|+||.||.+....  ....+++|.+..... ......+.+|+.+++.+. |+|++++++.+......+++|||++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT-PDEQLLFLQEVQPYRELN-HPNVLQCLGQCIESIPYLLVLEFCP   78 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCC-hHHHHHHHHHHHHHHhCC-CCCcceEEEEECCCCceEEEEEeCC
Confidence            358999999999986432  234678887754332 222345788999999998 8999999999988889999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +|+|.
T Consensus        79 ~g~L~   83 (269)
T cd05042          79 LGDLK   83 (269)
T ss_pred             CCcHH
Confidence            99874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.51  E-value=2.9e-13  Score=72.99  Aligned_cols=84  Identities=18%  Similarity=0.271  Sum_probs=68.3

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++.|++.+.||+|+||.||.+... .+..+++|.+....   .....+.+|+.+++.+. |+|++++++.+.. ...+++
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~~~~v   78 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EPIYII   78 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh---hHHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CCeEEE
Confidence            367899999999999999999754 35568899876432   22456888999999998 8999999988776 678999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +||+++++|.
T Consensus        79 ~e~~~~~~L~   88 (260)
T cd05073          79 TEFMAKGSLL   88 (260)
T ss_pred             EEeCCCCcHH
Confidence            9999998874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.50  E-value=3.2e-13  Score=73.50  Aligned_cols=84  Identities=24%  Similarity=0.388  Sum_probs=69.9

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |++.+.||.|.+|.||++.+..++..+++|.+............+.+|+..++.++ |+|++++++.+...+..++++||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e~   79 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFEF   79 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEec
Confidence            56788999999999999999888999999998754332223345778999999998 89999999999988999999999


Q ss_pred             cCCCCC
Q psy8005          84 LDLNHH   89 (91)
Q Consensus        84 ~~~g~L   89 (91)
                      ++ ++|
T Consensus        80 ~~-~~l   84 (283)
T cd07835          80 LD-LDL   84 (283)
T ss_pred             cC-cCH
Confidence            85 344

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.50  E-value=4.4e-13  Score=71.92  Aligned_cols=84  Identities=17%  Similarity=0.264  Sum_probs=70.5

Q ss_pred             eeeceecCcCeeEEEEEEEccCC----cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           5 KITKSFPLGKYATVRRCRDRKNG----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+.+.||.|+||.||++.....+    ..+++|.+...... .....+..|+..+..++ |+|++++++.+...+..+++
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~i   79 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE-QQIEEFLREARIMRKLD-HPNIVKLLGVCTEEEPLMIV   79 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh-HHHHHHHHHHHHHHhcC-CCchheEEEEEcCCCeeEEE
Confidence            56789999999999999987665    78999998655322 13456888999999997 89999999999888899999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||++++++|.
T Consensus        80 ~e~~~~~~l~   89 (258)
T smart00219       80 MEYMEGGDLL   89 (258)
T ss_pred             EeccCCCCHH
Confidence            9999998874

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=2.8e-13  Score=75.35  Aligned_cols=81  Identities=22%  Similarity=0.265  Sum_probs=62.7

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcC--CCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACR--CNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      ||+|+||.||++.+..++..+|+|.+....... ........+..++....  +||+++++...+......+++|||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            689999999999999889999999987543211 11223445555555542  489999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        81 g~L~   84 (330)
T cd05586          81 GELF   84 (330)
T ss_pred             ChHH
Confidence            9874

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.50  E-value=1.3e-12  Score=69.73  Aligned_cols=85  Identities=18%  Similarity=0.415  Sum_probs=73.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|...+.||+|++|.+|++.+...+..+++|.+.....  .....+.+|+..++.+. |++++++.+.+......++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~e   77 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVME   77 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEEe
Confidence            47788999999999999999988888999999876542  23456888999999999 8999999999988899999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      ++++++|.
T Consensus        78 ~~~~~~L~   85 (253)
T cd05122          78 FCSGGSLK   85 (253)
T ss_pred             cCCCCcHH
Confidence            99988764

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.50  E-value=7e-13  Score=73.85  Aligned_cols=83  Identities=24%  Similarity=0.326  Sum_probs=68.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~~~~lv   80 (91)
                      ++|.+.+.||.|+||.||++.+..++..+++|.+.+..........+.+|+.++..+. |||++++.+.+.. ....+++
T Consensus        10 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~lv   88 (328)
T cd07856          10 NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR-HENIISLSDIFISPLEDIYFV   88 (328)
T ss_pred             cceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC-CCCeeeEeeeEecCCCcEEEE
Confidence            4688999999999999999999988999999988654322233456778999999998 8999999998765 4578899


Q ss_pred             EeccC
Q psy8005          81 LELLD   85 (91)
Q Consensus        81 ~e~~~   85 (91)
                      +||+.
T Consensus        89 ~e~~~   93 (328)
T cd07856          89 TELLG   93 (328)
T ss_pred             eehhc
Confidence            99984

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.50  E-value=6.2e-13  Score=71.96  Aligned_cols=88  Identities=14%  Similarity=0.250  Sum_probs=68.8

Q ss_pred             cceeeceecCcCeeEEEEEEEcc-CCcEEEEEEeccccC--------chhHHHHHHHHHHHHHhcCCCCCeeeeheeeee
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRK-NGTQYAAKFLRKKRR--------STDLKAEILHEVAVLEACRCNSRIVQLHQVFES   73 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~   73 (91)
                      +|.+.+.||+|+||.||.+.... .+..+++|.+.....        .......+..|+.++...-+|+|++++++.+..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            57888999999999999999877 567899998864321        112233466778777653338999999999999


Q ss_pred             CCeEEEEEeccCCCCCC
Q psy8005          74 SHDMILLLELLDLNHHQ   90 (91)
Q Consensus        74 ~~~~~lv~e~~~~g~L~   90 (91)
                      .+..++++||+++++|.
T Consensus        81 ~~~~~lv~e~~~~~~l~   97 (269)
T cd08528          81 NDRLYIVMDLIEGAPLG   97 (269)
T ss_pred             CCeEEEEEecCCCCcHH
Confidence            99999999999998774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.50  E-value=3.1e-13  Score=73.02  Aligned_cols=83  Identities=19%  Similarity=0.230  Sum_probs=67.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|++|.||++.+..+ ..+++|.+......   ...+.+|+.+++.++ |+|++++++.+. ....+++|
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~~lv~   79 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLR-HEKLVQLYAVVS-EEPIYIVT   79 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCC-CCCcceEEEEEC-CCCcEEEE
Confidence            5688999999999999999977554 46899998754321   345788999999998 899999988764 45579999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        80 e~~~~~~L~   88 (262)
T cd05071          80 EYMSKGSLL   88 (262)
T ss_pred             EcCCCCcHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0599|consensus

Probab=99.50  E-value=6.7e-15  Score=79.61  Aligned_cols=89  Identities=19%  Similarity=0.377  Sum_probs=76.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc------hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS------TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      .|...+.+|.|.-+.|.+|....++..+++|.+....-.      ....+...+|+.+++++.+||+|+++.+.++++..
T Consensus        18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF   97 (411)
T KOG0599|consen   18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF   97 (411)
T ss_pred             hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence            466678899999999999999999999999999763211      12345578999999999999999999999999999


Q ss_pred             EEEEEeccCCCCCCC
Q psy8005          77 MILLLELLDLNHHQA   91 (91)
Q Consensus        77 ~~lv~e~~~~g~L~~   91 (91)
                      +++|+|+|+.|+|++
T Consensus        98 ~FlVFdl~prGELFD  112 (411)
T KOG0599|consen   98 VFLVFDLMPRGELFD  112 (411)
T ss_pred             hhhhhhhcccchHHH
Confidence            999999999999975

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.50  E-value=5.2e-13  Score=71.56  Aligned_cols=80  Identities=23%  Similarity=0.294  Sum_probs=68.0

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLN   87 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g   87 (91)
                      +.||.|++|.||++.... +..+++|.+...... .....+.+|+.+++.+. |+|++++++.+......++++|+++++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~   77 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPGG   77 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence            468999999999999877 889999988765432 33556889999999998 899999999998888999999999988


Q ss_pred             CCC
Q psy8005          88 HHQ   90 (91)
Q Consensus        88 ~L~   90 (91)
                      +|.
T Consensus        78 ~l~   80 (251)
T cd05041          78 SLL   80 (251)
T ss_pred             cHH
Confidence            763

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG4279|consensus

Probab=99.50  E-value=4.1e-14  Score=84.55  Aligned_cols=79  Identities=19%  Similarity=0.199  Sum_probs=70.9

Q ss_pred             eecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCC
Q psy8005           9 SFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNH   88 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~   88 (91)
                      .+|+|.||.||-+.+..+..++|+|.++.+..  ...+-++.|+.+.+.+. |.||+++.+++..++++.+.||-+|||+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekds--r~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS--REVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccc--hhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            78999999999999999999999999986542  23566899999999999 8999999999999999999999999999


Q ss_pred             CC
Q psy8005          89 HQ   90 (91)
Q Consensus        89 L~   90 (91)
                      |.
T Consensus       659 LS  660 (1226)
T KOG4279|consen  659 LS  660 (1226)
T ss_pred             HH
Confidence            84

>PHA02988 hypothetical protein; Provisional

Probab=99.50  E-value=6.9e-13  Score=72.55  Aligned_cols=80  Identities=11%  Similarity=0.066  Sum_probs=64.7

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCeEEEEEe
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMILLLE   82 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~~~lv~e   82 (91)
                      ..+++|+++.||++..  .+..+|+|.+....... ...+.+.+|+.++..+. ||||+++++.+..    ....+++||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeeeEEecccCCCceEEEEE
Confidence            5789999999999986  57899999987643222 22355779999999998 8999999998765    347899999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++|+|.
T Consensus       103 y~~~g~L~  110 (283)
T PHA02988        103 YCTRGYLR  110 (283)
T ss_pred             eCCCCcHH
Confidence            99999874

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.50  E-value=7.7e-13  Score=72.29  Aligned_cols=85  Identities=26%  Similarity=0.337  Sum_probs=63.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-CcEEEEEEeccccCchhHHHHHHHHHHHHHhcC--CCCCeeeeheeee-----e
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQVFE-----S   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~-----~   73 (91)
                      ++|.+.+.||+|+||.||++.+... +..+|+|.+..............+|+.+++.+.  .|||++++++.+.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            4789999999999999999988654 578899988754332222334556777766653  2899999998764     2


Q ss_pred             CCeEEEEEeccCC
Q psy8005          74 SHDMILLLELLDL   86 (91)
Q Consensus        74 ~~~~~lv~e~~~~   86 (91)
                      ....++++|++++
T Consensus        81 ~~~~~lv~e~~~~   93 (290)
T cd07862          81 ETKLTLVFEHVDQ   93 (290)
T ss_pred             CCcEEEEEccCCC
Confidence            3468999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.50  E-value=7.9e-13  Score=74.18  Aligned_cols=84  Identities=21%  Similarity=0.293  Sum_probs=68.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------C
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------~   75 (91)
                      ..|+..+.||+|+||.||.+.+..++..+++|.+............+.+|+.+++.++ |+|++++.+.+...      .
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC-CCCCcceeeeeccCCCccccC
Confidence            4688899999999999999999989999999998654333333445778999999998 89999998877543      3


Q ss_pred             eEEEEEeccCC
Q psy8005          76 DMILLLELLDL   86 (91)
Q Consensus        76 ~~~lv~e~~~~   86 (91)
                      ..++++||+++
T Consensus        95 ~~~lv~e~~~~  105 (353)
T cd07850          95 DVYLVMELMDA  105 (353)
T ss_pred             cEEEEEeccCC
Confidence            47999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.49  E-value=2.5e-13  Score=74.64  Aligned_cols=84  Identities=15%  Similarity=0.300  Sum_probs=69.9

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |.....||+|+||.||.+.+..++..+++|.+......  ....+.+|+..+..+. |||++++++.+...+..++++||
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~iv~e~   99 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEELWVLMEF   99 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCC-CCchhhhhhheeeCCeEEEEEec
Confidence            34455799999999999998888899999998654321  2345778999999998 89999999999999999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus       100 ~~~~~L~  106 (297)
T cd06659         100 LQGGALT  106 (297)
T ss_pred             CCCCCHH
Confidence            9998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.49  E-value=8e-13  Score=71.91  Aligned_cols=82  Identities=22%  Similarity=0.400  Sum_probs=69.4

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--CeEEEEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMILLL   81 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~~~lv~   81 (91)
                      |.+.+.||+|++|.||++.....+..+++|.+............+.+|+.+++.+. |+|++++.+.+...  ...++++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~   79 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMVF   79 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEEe
Confidence            57788999999999999999888899999999866422333456778999999998 89999999998877  7899999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      ||+++
T Consensus        80 e~~~~   84 (287)
T cd07840          80 EYMDH   84 (287)
T ss_pred             ccccc
Confidence            99975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.49  E-value=6.4e-13  Score=72.51  Aligned_cols=84  Identities=26%  Similarity=0.363  Sum_probs=63.3

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcC--CCCCeeeeheeeee-----CC
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQVFES-----SH   75 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~-----~~   75 (91)
                      +|.+.+.||+|+||.||++.+..++..+++|.+..............+|+.+++.+.  +|||++++++.+..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            488899999999999999999989999999998754322222233455666666553  28999999987653     24


Q ss_pred             eEEEEEeccCC
Q psy8005          76 DMILLLELLDL   86 (91)
Q Consensus        76 ~~~lv~e~~~~   86 (91)
                      ..++++|++++
T Consensus        81 ~~~lv~e~~~~   91 (288)
T cd07863          81 KVTLVFEHVDQ   91 (288)
T ss_pred             eEEEEEccccc
Confidence            57899999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.49  E-value=8.2e-13  Score=72.82  Aligned_cols=84  Identities=18%  Similarity=0.215  Sum_probs=70.1

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .|...+.||+|++|.||.+.....+..+++|.+..... .....+.+.+|+.+++.++ |||++++.+.+...+..++++
T Consensus        16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEEeCCeEEEEH
Confidence            47778899999999999999888889999998864322 2223346888999999998 899999999999889999999


Q ss_pred             eccCCC
Q psy8005          82 ELLDLN   87 (91)
Q Consensus        82 e~~~~g   87 (91)
                      ||+++.
T Consensus        95 e~~~g~  100 (307)
T cd06607          95 EYCLGS  100 (307)
T ss_pred             HhhCCC
Confidence            999753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.49  E-value=1.3e-13  Score=77.06  Aligned_cols=88  Identities=14%  Similarity=0.197  Sum_probs=68.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~   75 (91)
                      ++|++.+.||+|+||.||.+....     ++..+++|.+..... ......+..|+.++..+.+|+|++++.+.+.. ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~   85 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT-ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG   85 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC-HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence            468899999999999999986432     346899998864432 22234577899999999558999999987654 45


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      .+++++||+++++|.
T Consensus        86 ~~~~v~ey~~~~~L~  100 (337)
T cd05054          86 PLMVIVEYCKFGNLS  100 (337)
T ss_pred             CEEEEEecCCCCCHH
Confidence            788999999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0587|consensus

Probab=99.49  E-value=2.9e-13  Score=81.71  Aligned_cols=85  Identities=19%  Similarity=0.239  Sum_probs=70.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee-----eCCeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-----SSHDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-----~~~~~   77 (91)
                      .+.+.+.||.|.+|+||++.....++..|+|++....-.   -++.-.|..+++...+|||++..++++.     .++.+
T Consensus        20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~---deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL   96 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE---EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL   96 (953)
T ss_pred             ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc---cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence            467889999999999999999999999999998765432   2345567788888888999999988874     35689


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      |||||||.+|+..
T Consensus        97 WLVMEfC~gGSVT  109 (953)
T KOG0587|consen   97 WLVMEFCGGGSVT  109 (953)
T ss_pred             EEEeeccCCccHH
Confidence            9999999999853

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.49  E-value=3.6e-13  Score=73.39  Aligned_cols=86  Identities=13%  Similarity=0.218  Sum_probs=69.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      .++...+.||+|+||.||.+...     ..+..+++|.+....  ......+.+|+.+++.++ |+|++++++.+.....
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~   81 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQ-HQHIVRFYGVCTEGRP   81 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCC-CCCCceEEEEEecCCc
Confidence            35778899999999999998642     235578888876432  233456889999999998 8999999999988888


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++++|.
T Consensus        82 ~~lv~e~~~~~~L~   95 (280)
T cd05092          82 LLMVFEYMRHGDLN   95 (280)
T ss_pred             eEEEEecCCCCCHH
Confidence            99999999998874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.49  E-value=2.1e-13  Score=74.26  Aligned_cols=87  Identities=15%  Similarity=0.192  Sum_probs=70.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-----CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|++.+.||+|+||.||++....+     +..+++|.+..... ......+..|+.++..++ |||++++++.+.....
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~   82 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQ-HPNIVCLLGVVTKEQP   82 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCC-CCCcCeEEEEEcCCCc
Confidence            5678889999999999999976532     46799999875432 233456888999999998 8999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++++|.
T Consensus        83 ~~~~~e~~~~~~l~   96 (283)
T cd05091          83 LSMIFSYCSHSDLH   96 (283)
T ss_pred             eEEEEEcCCCCcHH
Confidence            99999999888763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.49  E-value=2.1e-13  Score=74.81  Aligned_cols=84  Identities=13%  Similarity=0.246  Sum_probs=70.1

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |.....||+|+||.||++.+..++..+++|.+....  ......+.+|+..++.++ |+|++++.+.+...+..++++||
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~lv~e~  100 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDELWVVMEF  100 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCC-CCcHHHHHHheecCCeEEEEEeC
Confidence            444568999999999999988888999999886432  222445788999999998 89999999999888999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus       101 ~~~~~L~  107 (292)
T cd06658         101 LEGGALT  107 (292)
T ss_pred             CCCCcHH
Confidence            9998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.49  E-value=3.2e-13  Score=72.77  Aligned_cols=83  Identities=19%  Similarity=0.262  Sum_probs=67.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|++|.||++... .+..+++|.+......   .+.+.+|+.+++.++ |++++++++.+. ....+++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~~lv~   79 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLR-HDKLVQLYAVVS-EEPIYIVT   79 (260)
T ss_pred             HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcC-CCceEEEEeEEC-CCCcEEEE
Confidence            57889999999999999999764 4567899988754332   345888999999998 899999988775 45589999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        80 e~~~~~~L~   88 (260)
T cd05070          80 EYMSKGSLL   88 (260)
T ss_pred             EecCCCcHH
Confidence            999998874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.48  E-value=4.2e-13  Score=72.18  Aligned_cols=83  Identities=23%  Similarity=0.328  Sum_probs=67.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheee-eeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF-ESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~l   79 (91)
                      |++|++.+.||+|++|.||++...  +..+++|.+....    ..+.+.+|+.+++.++ |++++++++.+ ......++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~l   77 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYI   77 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCCCceEE
Confidence            467899999999999999998654  6778999885432    1345788999999998 89999998864 45567899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++||+++++|.
T Consensus        78 v~e~~~~~~L~   88 (256)
T cd05082          78 VTEYMAKGSLV   88 (256)
T ss_pred             EEECCCCCcHH
Confidence            99999998874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0576|consensus

Probab=99.48  E-value=3.5e-15  Score=87.91  Aligned_cols=87  Identities=21%  Similarity=0.336  Sum_probs=74.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+...+|+|.||.||++.+..++...|+|.++...-  +.......|+-.++... ||||+.+++.+...+..|+.|
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~-h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCC-CcChHHHHhhhhhhcCcEEEE
Confidence            578889999999999999999999999999999976532  11334667777788877 899999999999999999999


Q ss_pred             eccCCCCCCC
Q psy8005          82 ELLDLNHHQA   91 (91)
Q Consensus        82 e~~~~g~L~~   91 (91)
                      |||.+|+|.+
T Consensus        92 EycgggslQd  101 (829)
T KOG0576|consen   92 EYCGGGSLQD  101 (829)
T ss_pred             EecCCCcccc
Confidence            9999999875

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.48  E-value=5.3e-13  Score=72.36  Aligned_cols=82  Identities=21%  Similarity=0.231  Sum_probs=65.2

Q ss_pred             ceecCcCeeEEEEEEEccCCc--EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGT--QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +.||+|+||.||++....++.  .+++|.+.... .....+.+.+|+.++..+.+|||++++++.+......+++|||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence            368999999999998876654  45777775322 123345688899999999558999999999988888999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +|+|.
T Consensus        80 ~~~L~   84 (270)
T cd05047          80 HGNLL   84 (270)
T ss_pred             CCcHH
Confidence            98874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.48  E-value=5.4e-13  Score=73.37  Aligned_cols=85  Identities=16%  Similarity=0.266  Sum_probs=67.9

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------   74 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------   74 (91)
                      +++|.+.+.||+|++|.||++.+..++..+++|.+..............+|+.+++.++ |+|++++.+.+...      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~   85 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK-HPNVVPLIDMAVERPDKSKR   85 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcC-CCCccchhhheecccccccc
Confidence            46899999999999999999999888999999998754332222345678999999998 89999998876432      


Q ss_pred             --CeEEEEEeccCC
Q psy8005          75 --HDMILLLELLDL   86 (91)
Q Consensus        75 --~~~~lv~e~~~~   86 (91)
                        ..+++++||+++
T Consensus        86 ~~~~~~lv~~~~~~   99 (311)
T cd07866          86 KRGSVYMVTPYMDH   99 (311)
T ss_pred             cCceEEEEEecCCc
Confidence              347999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.48  E-value=9.1e-13  Score=71.36  Aligned_cols=85  Identities=12%  Similarity=0.215  Sum_probs=65.4

Q ss_pred             eeeceecCcCeeEEEEEEEccCCc--EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee------CCe
Q psy8005           5 KITKSFPLGKYATVRRCRDRKNGT--QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------SHD   76 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~------~~~   76 (91)
                      .+.+.||+|+||.||++.....+.  .+++|.+..........+.+.+|..+++.++ |+|++++.+.+..      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCCCC
Confidence            467899999999999998766554  6889988665333333556888999999998 8999999876422      224


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++||+++|+|.
T Consensus        81 ~~~v~e~~~~~~l~   94 (272)
T cd05075          81 PVVILPFMKHGDLH   94 (272)
T ss_pred             cEEEEEeCCCCcHH
Confidence            68999999998763

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.47  E-value=7.8e-13  Score=72.21  Aligned_cols=84  Identities=20%  Similarity=0.252  Sum_probs=69.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|...+.||+|+||.||++.+..++..+++|.+...... .....+..|+..+..+.+|+|++++++.+......++++
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~   82 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM   82 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence            4677788999999999999999888999999998764332 234457888888888866899999999988888899999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      |+++.
T Consensus        83 e~~~~   87 (288)
T cd06616          83 ELMDI   87 (288)
T ss_pred             ecccC
Confidence            99764

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0574|consensus

Probab=99.47  E-value=4.1e-15  Score=81.49  Aligned_cols=82  Identities=18%  Similarity=0.346  Sum_probs=71.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      -|.+.+.+|+|+||.|+++.++.+|.-+|+|.++....    -++...|+.++++.. .++++++++.+-....+|+|||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD----LQEIIKEISIMQQC~-S~yVVKYYGSYFK~sDLWIVME  108 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD----LQEIIKEISIMQQCK-SKYVVKYYGSYFKHSDLWIVME  108 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch----HHHHHHHHHHHHHcC-CchhhhhhhhhccCCceEeehh
Confidence            35677899999999999999999999999998875432    567889999999998 6999999999888888999999


Q ss_pred             ccCCCCC
Q psy8005          83 LLDLNHH   89 (91)
Q Consensus        83 ~~~~g~L   89 (91)
                      ||.-|++
T Consensus       109 YCGAGSi  115 (502)
T KOG0574|consen  109 YCGAGSI  115 (502)
T ss_pred             hcCCCcH
Confidence            9988875

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=1.3e-12  Score=70.39  Aligned_cols=83  Identities=20%  Similarity=0.295  Sum_probs=62.6

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +.||+|++|.||++.+...+..+++|.+........ .......+...+....+|+|++++++.+...+..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            578999999999999988889999999875432111 1122344444444433489999999999988899999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      ++|.
T Consensus        82 ~~L~   85 (260)
T cd05611          82 GDCA   85 (260)
T ss_pred             CCHH
Confidence            8864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.47  E-value=7e-13  Score=72.28  Aligned_cols=85  Identities=16%  Similarity=0.230  Sum_probs=65.8

Q ss_pred             ceeeceecCcCeeEEEEEEE----ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeE
Q psy8005           4 TKITKSFPLGKYATVRRCRD----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDM   77 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~   77 (91)
                      |+..+.||+|+||.||.+..    ...+..+++|.+..... ......+.+|+.+++.++ |||++++.+.+..  ....
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~   83 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLY-HENIVKYKGCCSEQGGKGL   83 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCceE
Confidence            38889999999999987642    34567899999865432 222445788999999998 8999999987654  3468


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++|||+++++|.
T Consensus        84 ~lv~e~~~~~~l~   96 (283)
T cd05080          84 QLIMEYVPLGSLR   96 (283)
T ss_pred             EEEecCCCCCCHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.47  E-value=2.2e-12  Score=71.49  Aligned_cols=82  Identities=16%  Similarity=0.208  Sum_probs=68.8

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      |...+.||+|+||.||++.+..++..+++|.+...... ......+..|+.+++.++ |+|++++.+.+...+..++++|
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEEEEEe
Confidence            56678899999999999998888899999998754322 223345788999999998 8999999999988889999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      |+++
T Consensus       106 ~~~g  109 (317)
T cd06635         106 YCLG  109 (317)
T ss_pred             CCCC
Confidence            9975

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.47  E-value=6.3e-13  Score=74.08  Aligned_cols=84  Identities=18%  Similarity=0.339  Sum_probs=68.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~~   77 (91)
                      ++|.+.+.||+|++|.||++....++..+++|.+............+.+|+.+++.++ |||++++++.+..    ....
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCceE
Confidence            4788899999999999999999988999999998754322223445778999999998 8999999887653    3468


Q ss_pred             EEEEeccCC
Q psy8005          78 ILLLELLDL   86 (91)
Q Consensus        78 ~lv~e~~~~   86 (91)
                      ++++||+.+
T Consensus        84 ~lv~e~~~~   92 (334)
T cd07855          84 YVVMDLMES   92 (334)
T ss_pred             EEEEehhhh
Confidence            999999963

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.46  E-value=1.6e-12  Score=70.67  Aligned_cols=82  Identities=27%  Similarity=0.435  Sum_probs=66.2

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--CeEEEEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMILLL   81 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~~~lv~   81 (91)
                      |.+.+.+|+|++|.||++.+..++..+++|.+........ ......|+..+..+.+|+|++++++.+.+.  +..++++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~   79 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF   79 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence            6778899999999999999988889999999865432211 223456788888886689999999998877  7899999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      ||+++
T Consensus        80 e~~~~   84 (282)
T cd07831          80 ELMDM   84 (282)
T ss_pred             ecCCc
Confidence            99975

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.46  E-value=8.9e-13  Score=72.37  Aligned_cols=81  Identities=12%  Similarity=0.232  Sum_probs=68.5

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      ...||+|++|.||++....++..+++|.+....  ......+.+|+..++.++ |+|++++++.+...+..+++|||+++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~  101 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEG  101 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEEecCCC
Confidence            357999999999999988889999999875432  222445888999999998 89999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      ++|.
T Consensus       102 ~~L~  105 (292)
T cd06657         102 GALT  105 (292)
T ss_pred             CcHH
Confidence            8764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0695|consensus

Probab=99.46  E-value=7.7e-14  Score=77.62  Aligned_cols=90  Identities=22%  Similarity=0.310  Sum_probs=77.6

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +.+|.+.+.||+|+|++|..+....+.+-+|+|++++.....+ ....+..|-.++...++||.++.++.+|++...+++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            4678999999999999999999989999999999988765443 234567777788888889999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      |.||++||+|.
T Consensus       329 vieyv~ggdlm  339 (593)
T KOG0695|consen  329 VIEYVNGGDLM  339 (593)
T ss_pred             EEEEecCccee
Confidence            99999999873

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.46  E-value=7.8e-14  Score=75.16  Aligned_cols=80  Identities=14%  Similarity=0.247  Sum_probs=62.9

Q ss_pred             ceecCcCeeEEEEEEEccCCc-------EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           8 KSFPLGKYATVRRCRDRKNGT-------QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~-------~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +.||+|+||.||++.....+.       .+++|.+....  ....+.+..+..+++.+. |||++++++.+..++..+++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv   77 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLS-HKHLVLNYGVCVCGDESIMV   77 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCC-CCChhheeeEEEeCCCcEEE
Confidence            468999999999998754332       36777765432  222445788888999998 89999999999888889999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        78 ~e~~~~g~L~   87 (258)
T cd05078          78 QEYVKFGSLD   87 (258)
T ss_pred             EecCCCCcHH
Confidence            9999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.46  E-value=5.4e-13  Score=73.03  Aligned_cols=86  Identities=14%  Similarity=0.222  Sum_probs=68.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      .+|.+.+.||+|+||.||.+....     ++..+++|.+....  ......+.+|+.+++.++ |+|++++.+.+...+.
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~   81 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDP   81 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCc
Confidence            357888999999999999997532     34457788775432  222345888999999998 8999999999998889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        82 ~~lv~e~~~~~~L~   95 (291)
T cd05094          82 LIMVFEYMKHGDLN   95 (291)
T ss_pred             eEEEEecCCCCcHH
Confidence            99999999998864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.46  E-value=1.4e-12  Score=70.27  Aligned_cols=80  Identities=26%  Similarity=0.435  Sum_probs=63.8

Q ss_pred             eecCcCeeEEEEEEE--ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           9 SFPLGKYATVRRCRD--RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      .||+|+||.||++..  ..++..+++|.+..........+.+..|+.+++.+. |+|++++++.+. .+..+++|||+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~-~~~~~lv~e~~~~   79 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLD-NPYIVRMIGICE-AESWMLVMELAEL   79 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCC-CCCcceEEEEEc-CCCcEEEEecCCC
Confidence            589999999999864  345678999998755433344566889999999998 899999988765 4567899999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      ++|.
T Consensus        80 ~~L~   83 (257)
T cd05116          80 GPLN   83 (257)
T ss_pred             CcHH
Confidence            8874

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.45  E-value=1e-12  Score=70.91  Aligned_cols=83  Identities=16%  Similarity=0.228  Sum_probs=66.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+...||+|++|.||++..... ..+++|.+.....   ..+.+.+|+.+++.+. |+|++++++.+. .+..+++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLR-HDKLVPLYAVVS-EEPIYIVT   79 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCC-CCCeeeEEEEEc-CCCcEEEE
Confidence            5688899999999999999977543 4688998765432   2345788999999998 899999988775 45688999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        80 e~~~~~~L~   88 (260)
T cd05069          80 EFMGKGSLL   88 (260)
T ss_pred             EcCCCCCHH
Confidence            999998874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0696|consensus

Probab=99.45  E-value=1e-14  Score=82.74  Aligned_cols=89  Identities=19%  Similarity=0.217  Sum_probs=71.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+|..+..||.|+||+|..+..+.+...+|+|++.+...- .+..+-.+.|-.++.-...-|.+++++.++++.+.+|+|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            3677888999999999999999888899999999886543 222333445555555555468999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+.||+|.
T Consensus       429 MEyvnGGDLM  438 (683)
T KOG0696|consen  429 MEYVNGGDLM  438 (683)
T ss_pred             EEEecCchhh
Confidence            9999999984

>KOG0577|consensus

Probab=99.45  E-value=3.5e-14  Score=83.46  Aligned_cols=82  Identities=20%  Similarity=0.233  Sum_probs=70.3

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      |.-.+.||.|+||-||-+.+..+...||+|.+.-.+.. ....+..+.|+..++.+. |||.|.+.++|......|+|||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeeccchHHHHHH
Confidence            34467899999999999999988899999998755432 234667899999999999 8999999999999999999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ||-|
T Consensus       107 YClG  110 (948)
T KOG0577|consen  107 YCLG  110 (948)
T ss_pred             HHhc
Confidence            9965

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.45  E-value=1.5e-12  Score=70.06  Aligned_cols=80  Identities=24%  Similarity=0.305  Sum_probs=63.9

Q ss_pred             ceecCcCeeEEEEEEEccCC---cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEecc
Q psy8005           8 KSFPLGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   84 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~   84 (91)
                      +.||+|+||.||++.....+   ..+++|.+...... .....+.+|+.+++.+. |+|++++++.+. .+..++++||+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~~~v~e~~   77 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLD-HPCIVRLIGVCK-GEPLMLVMELA   77 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcC-CCCeeeEEEEEc-CCceEEEEEeC
Confidence            46899999999999765544   68999998765432 23446888999999998 899999998765 44679999999


Q ss_pred             CCCCCC
Q psy8005          85 DLNHHQ   90 (91)
Q Consensus        85 ~~g~L~   90 (91)
                      ++++|.
T Consensus        78 ~~~~L~   83 (257)
T cd05060          78 PLGPLL   83 (257)
T ss_pred             CCCcHH
Confidence            998874

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.45  E-value=8.1e-13  Score=71.62  Aligned_cols=80  Identities=14%  Similarity=0.131  Sum_probs=62.0

Q ss_pred             eecCcCeeEEEEEEEccC--CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           9 SFPLGKYATVRRCRDRKN--GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      .||+|+||.||++.....  ...+++|.+..... ......+.+++.+++.++ |||++++++.+......+++|||+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~   79 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIPYLLVFEYCEL   79 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccC-CcchhheEEEecCCCccEEEEecCCC
Confidence            589999999999864332  23456676654322 223456888999999998 89999999999888899999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      |+|.
T Consensus        80 ~~L~   83 (268)
T cd05086          80 GDLK   83 (268)
T ss_pred             CcHH
Confidence            9874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0667|consensus

Probab=99.45  E-value=1e-12  Score=76.91  Aligned_cols=80  Identities=21%  Similarity=0.357  Sum_probs=67.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC-----CCCeeeeheeeeeCCeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-----NSRIVQLHQVFESSHDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~~~~~~~~~~   77 (91)
                      .|.+.+.||+|+||+|.+|.+..++..||+|+++...   ........|+.++..++.     .-|+++++++|.-.+.+
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl  263 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL  263 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence            4778999999999999999999999999999997653   224456678888888772     25999999999999999


Q ss_pred             EEEEeccC
Q psy8005          78 ILLLELLD   85 (91)
Q Consensus        78 ~lv~e~~~   85 (91)
                      |||+|++.
T Consensus       264 ciVfELL~  271 (586)
T KOG0667|consen  264 CIVFELLS  271 (586)
T ss_pred             eeeehhhh
Confidence            99999875

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.44  E-value=3.3e-13  Score=72.96  Aligned_cols=81  Identities=21%  Similarity=0.223  Sum_probs=64.6

Q ss_pred             ceecCcCeeEEEEEEEccCC------cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           8 KSFPLGKYATVRRCRDRKNG------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.||+|+||.||.+......      ..+++|.+..... ......+.+++.+++.++ |||++++++.+......++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~   78 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEPQYIIM   78 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCCeEEEE
Confidence            36899999999999865432      5788888754422 122446888999999998 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 e~~~~~~L~   87 (269)
T cd05044          79 ELMEGGDLL   87 (269)
T ss_pred             eccCCCcHH
Confidence            999998874

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.44  E-value=2.5e-12  Score=71.83  Aligned_cols=84  Identities=15%  Similarity=0.266  Sum_probs=67.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-----Ce
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-----~~   76 (91)
                      ..|.+.+.||+|+||.||.+.+..++..+++|.+..............+|+.+++.++ |+|++++.+.+...     ..
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD-HENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC-CCCccchHHheecccccccCc
Confidence            4688999999999999999999888999999998754222222345678999999998 89999998876543     24


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .++++||+.+
T Consensus        84 ~~lv~e~~~~   93 (337)
T cd07858          84 VYIVYELMDT   93 (337)
T ss_pred             EEEEEeCCCC
Confidence            7999999963

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.44  E-value=1.5e-12  Score=70.08  Aligned_cols=80  Identities=21%  Similarity=0.370  Sum_probs=67.3

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNH   88 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~   88 (91)
                      ||.|++|.||++.+..++..+++|.+...... ......+.+|+.+++.+. |+|++++.+.+......++++|++++++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD   79 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence            58899999999999888999999998765321 123445888899999998 8999999999988889999999999988


Q ss_pred             CC
Q psy8005          89 HQ   90 (91)
Q Consensus        89 L~   90 (91)
                      |.
T Consensus        80 L~   81 (265)
T cd05579          80 LA   81 (265)
T ss_pred             HH
Confidence            74

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.44  E-value=9.7e-13  Score=70.40  Aligned_cols=80  Identities=26%  Similarity=0.365  Sum_probs=67.6

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNH   88 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~   88 (91)
                      ||+|++|.+|.+.....+..+++|.+....... .....+..|+.+++.++ |+|++++++.+...+..+++||++++++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~   79 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE   79 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence            689999999999988888999999987654322 23446788899999998 8999999999999999999999999887


Q ss_pred             CC
Q psy8005          89 HQ   90 (91)
Q Consensus        89 L~   90 (91)
                      |.
T Consensus        80 L~   81 (250)
T cd05123          80 LF   81 (250)
T ss_pred             HH
Confidence            74

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.44  E-value=8.5e-13  Score=70.95  Aligned_cols=80  Identities=25%  Similarity=0.404  Sum_probs=65.3

Q ss_pred             ceecCcCeeEEEEEEEccC-C--cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEecc
Q psy8005           8 KSFPLGKYATVRRCRDRKN-G--TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   84 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~-~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~   84 (91)
                      +.||+|++|.||++.+... +  ..+++|.+...... ...+.+.+|+.+++.+. |+|++++++.+.. ...++++|++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEec
Confidence            4689999999999987552 2  26899998766542 33556889999999998 8999999998877 8899999999


Q ss_pred             CCCCCC
Q psy8005          85 DLNHHQ   90 (91)
Q Consensus        85 ~~g~L~   90 (91)
                      ++++|.
T Consensus        78 ~~~~L~   83 (257)
T cd05040          78 PLGSLL   83 (257)
T ss_pred             CCCcHH
Confidence            998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.44  E-value=2.3e-12  Score=69.81  Aligned_cols=86  Identities=15%  Similarity=0.238  Sum_probs=67.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC---CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|.+.+.||+|++|.||++.....   ...+++|....... ....+.+.+|+.+++.+. |+|++++.+.+.. ...+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFD-HPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCC-CCchhceeEEEcC-CCcE
Confidence            3577889999999999999986543   34688888765432 233456888999999998 8999999988764 4578


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus        83 lv~e~~~~~~L~   94 (270)
T cd05056          83 IVMELAPLGELR   94 (270)
T ss_pred             EEEEcCCCCcHH
Confidence            999999998874

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0193|consensus

Probab=99.44  E-value=4e-13  Score=78.62  Aligned_cols=83  Identities=18%  Similarity=0.186  Sum_probs=71.2

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      ..+...||+|+||+||+|.+.   ..||||.+......+..-+.|.+|+.+++.-. |.||+-..+++..+.. .+|..+
T Consensus       394 v~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~~-AIiTqw  468 (678)
T KOG0193|consen  394 VLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTR-HENILLFMGACMNPPL-AIITQW  468 (678)
T ss_pred             hhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcc-hhhheeeehhhcCCce-eeeehh
Confidence            456789999999999999874   35899999987776666778999999999998 8999999999876665 899999


Q ss_pred             cCCCCCCC
Q psy8005          84 LDLNHHQA   91 (91)
Q Consensus        84 ~~~g~L~~   91 (91)
                      |+|.+|+.
T Consensus       469 CeGsSLY~  476 (678)
T KOG0193|consen  469 CEGSSLYT  476 (678)
T ss_pred             ccCchhhh
Confidence            99999873

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.43  E-value=3.1e-12  Score=70.24  Aligned_cols=84  Identities=20%  Similarity=0.257  Sum_probs=68.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|++|.||++.+..++..+++|.+...... .....+..++..+.....|+|++++++.+......++++
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            6788999999999999999999888899999998754322 223345666766666655899999999999999999999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      |++++
T Consensus        94 e~~~~   98 (296)
T cd06618          94 ELMST   98 (296)
T ss_pred             eccCc
Confidence            99864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.43  E-value=1e-12  Score=71.47  Aligned_cols=84  Identities=25%  Similarity=0.346  Sum_probs=67.7

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |.+.+.||+|++|.||++.....+..+++|.+....... ......+++..+..+.+|+|++++++.+...+..+++||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   79 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEY   79 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEec
Confidence            677889999999999999998888899999986543211 1223456788888887679999999999888999999999


Q ss_pred             cCCCCC
Q psy8005          84 LDLNHH   89 (91)
Q Consensus        84 ~~~g~L   89 (91)
                      + +++|
T Consensus        80 ~-~~~l   84 (283)
T cd07830          80 M-EGNL   84 (283)
T ss_pred             C-CCCH
Confidence            9 5555

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.43  E-value=1.2e-12  Score=72.95  Aligned_cols=87  Identities=21%  Similarity=0.290  Sum_probs=67.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--CeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~~~l   79 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+............+.+|+.++..+.+|+|++++++.+...  ...++
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l   86 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL   86 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence            4688889999999999999998888889999988653222222345677999999993389999999987543  36899


Q ss_pred             EEeccCCCCC
Q psy8005          80 LLELLDLNHH   89 (91)
Q Consensus        80 v~e~~~~g~L   89 (91)
                      ++||+++ +|
T Consensus        87 v~e~~~~-~L   95 (337)
T cd07852          87 VFEYMET-DL   95 (337)
T ss_pred             Eeccccc-CH
Confidence            9999974 44

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.43  E-value=8.7e-13  Score=73.81  Aligned_cols=86  Identities=20%  Similarity=0.245  Sum_probs=68.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe-----
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-----   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~-----   76 (91)
                      ++|.+...||+|.+|.||++.+..++..+++|.+............+.+|+.+++.+. |+|++++.+.+.....     
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD-HENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhcc-CCCHHHHHHHhhccccccccc
Confidence            4688899999999999999999888899999988654322223345778999999998 8999999887765554     


Q ss_pred             -EEEEEeccCCCCC
Q psy8005          77 -MILLLELLDLNHH   89 (91)
Q Consensus        77 -~~lv~e~~~~g~L   89 (91)
                       .++++|++. ++|
T Consensus        94 ~~~lv~e~~~-~~L  106 (343)
T cd07851          94 DVYLVTHLMG-ADL  106 (343)
T ss_pred             cEEEEEecCC-CCH
Confidence             899999984 444

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.43  E-value=1.6e-12  Score=70.49  Aligned_cols=81  Identities=16%  Similarity=0.243  Sum_probs=61.0

Q ss_pred             cceeecee--cCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           3 NTKITKSF--PLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         3 ~~~~~~~i--g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +|.+.+.+  |+|+||.||.+....++..+++|.+........       +......+.+|+|++++++.+...+..+++
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv   87 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTLKGHVLI   87 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence            45555555  999999999999988899999999865432111       111122222489999999999989999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus        88 ~e~~~~~~L~   97 (267)
T PHA03390         88 MDYIKDGDLF   97 (267)
T ss_pred             EEcCCCCcHH
Confidence            9999999874

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.43  E-value=9.8e-13  Score=70.87  Aligned_cols=87  Identities=16%  Similarity=0.234  Sum_probs=66.9

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccc---cCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKK---RRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      .|.+.+.||+|+||.||++.+...+...++|.+...   ............|+.+++.++ |||++++++.+......++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l   79 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD-HPAIVKFHASFLERDAFCI   79 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC-CCcHHHHHHHHhcCCceEE
Confidence            478889999999999999988766555555555432   112222334667888899998 8999999999888888999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++||+++++|.
T Consensus        80 v~e~~~~~~l~   90 (260)
T cd08222          80 ITEYCEGRDLD   90 (260)
T ss_pred             EEEeCCCCCHH
Confidence            99999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.43  E-value=1.3e-12  Score=70.98  Aligned_cols=82  Identities=24%  Similarity=0.405  Sum_probs=69.5

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |.+.+.||+|++|.||++.....+..+++|.+............+..|+..++.++ |++++++++.+......++++||
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~   79 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFEF   79 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEec
Confidence            56778999999999999998888899999998765433233456778999999998 89999999999888999999999


Q ss_pred             cCC
Q psy8005          84 LDL   86 (91)
Q Consensus        84 ~~~   86 (91)
                      +++
T Consensus        80 ~~~   82 (283)
T cd05118          80 MDT   82 (283)
T ss_pred             cCC
Confidence            975

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.43  E-value=3.4e-12  Score=71.55  Aligned_cols=86  Identities=21%  Similarity=0.263  Sum_probs=66.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------C
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------~   75 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+............+.+|+.++..++ |+|++++.+.+...      .
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~~~~~~~~   95 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFN   95 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcC-CCcccceeeeeeecccccccc
Confidence            6789999999999999999998888999999998754322222345778999999998 89999998877543      3


Q ss_pred             eEEEEEeccCCCCC
Q psy8005          76 DMILLLELLDLNHH   89 (91)
Q Consensus        76 ~~~lv~e~~~~g~L   89 (91)
                      ..+++++++ +++|
T Consensus        96 ~~~lv~~~~-~~~L  108 (345)
T cd07877          96 DVYLVTHLM-GADL  108 (345)
T ss_pred             cEEEEehhc-ccCH
Confidence            467888876 4444

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.43  E-value=4.2e-12  Score=69.46  Aligned_cols=84  Identities=15%  Similarity=0.264  Sum_probs=69.6

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |...+.||+|++|.||++.+...+..+++|.+.....  .....+.+|+.+++.++ |+|++++++.+...+..++++||
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~~~~v~e~   97 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVVMEF   97 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcC-CCChheEEEEEEcCCeEEEEEec
Confidence            3445689999999999999888888999998854321  22345788999999998 89999999999888999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus        98 ~~~~~L~  104 (285)
T cd06648          98 LEGGALT  104 (285)
T ss_pred             cCCCCHH
Confidence            9998874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.42  E-value=8e-12  Score=69.19  Aligned_cols=82  Identities=13%  Similarity=0.168  Sum_probs=67.7

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      |...+.||+|++|.||++.+..++..+++|.+...... ......+..|+.+++.++ |+|++++.+.+......++++|
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e  101 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWLVME  101 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEEEEe
Confidence            34456799999999999998888899999998754322 223345788999999998 8999999999999999999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      |+.+
T Consensus       102 ~~~~  105 (313)
T cd06633         102 YCLG  105 (313)
T ss_pred             cCCC
Confidence            9964

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0584|consensus

Probab=99.42  E-value=9.2e-14  Score=81.15  Aligned_cols=85  Identities=15%  Similarity=0.291  Sum_probs=71.3

Q ss_pred             eeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc--hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC--eEEEE
Q psy8005           5 KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMILL   80 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~--~~~lv   80 (91)
                      +....||+|+|-+||++.+..+|..||+-.++.....  ....+.+..|+.+|+.|+ |+||++++++|.+..  .+-+|
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCceeeee
Confidence            4567899999999999999999999998877654332  334577999999999999 899999999987655  48899


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      .|++..|+|.
T Consensus       122 TEL~TSGtLr  131 (632)
T KOG0584|consen  122 TELFTSGTLR  131 (632)
T ss_pred             eecccCCcHH
Confidence            9999999985

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.42  E-value=1.5e-12  Score=70.03  Aligned_cols=81  Identities=17%  Similarity=0.261  Sum_probs=66.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||+|+||.||.+..  .+..+++|.+....    ....+.+|+.++..++ |||++++++.+... ..+++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~-~~~~v~   77 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLH-HKNLVRLLGVILHN-GLYIVM   77 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCC-CCCcCeEEEEEcCC-CcEEEE
Confidence            4688999999999999998853  56778999886432    2456888999999998 89999999887654 479999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        78 e~~~~~~L~   86 (254)
T cd05083          78 ELMSKGNLV   86 (254)
T ss_pred             ECCCCCCHH
Confidence            999998874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.42  E-value=6.2e-13  Score=72.23  Aligned_cols=84  Identities=24%  Similarity=0.415  Sum_probs=70.7

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |...+.||+|.+|.||.+....++..+++|.+..........+.+..++.+++.+. |+|++++++.+......++++|+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e~   79 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFEY   79 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEecC
Confidence            56778999999999999999888999999999865432333456778999999998 89999999999888899999999


Q ss_pred             cCCCCC
Q psy8005          84 LDLNHH   89 (91)
Q Consensus        84 ~~~g~L   89 (91)
                      +++ +|
T Consensus        80 ~~~-~l   84 (282)
T cd07829          80 CDM-DL   84 (282)
T ss_pred             cCc-CH
Confidence            974 54

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.42  E-value=3.1e-12  Score=72.01  Aligned_cols=75  Identities=13%  Similarity=0.148  Sum_probs=64.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||+|+||.||++.....+..+++|......        ...|+.+++.++ |+|++++++.+......++++|
T Consensus        67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVN-HPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCC-CCCCcChhheEEeCCeeEEEEE
Confidence            5889999999999999999998888899999754322        235788899998 8999999999998899999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ++.+
T Consensus       138 ~~~~  141 (357)
T PHA03209        138 HYSS  141 (357)
T ss_pred             ccCC
Confidence            9864

>KOG0666|consensus

Probab=99.42  E-value=5.4e-14  Score=77.23  Aligned_cols=85  Identities=19%  Similarity=0.352  Sum_probs=68.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~~   76 (91)
                      ..|+.+..||+|.||.||++....+..    .+|+|.+.........+....+|+.+++.+. |+|++.+...+.. +..
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK-HPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc-CCcchhHHHHHhccCce
Confidence            467888999999999999996554432    6788888765434444556789999999999 8999999988876 678


Q ss_pred             EEEEEeccCCC
Q psy8005          77 MILLLELLDLN   87 (91)
Q Consensus        77 ~~lv~e~~~~g   87 (91)
                      +++++||++..
T Consensus       103 v~l~fdYAEhD  113 (438)
T KOG0666|consen  103 VWLLFDYAEHD  113 (438)
T ss_pred             EEEEehhhhhh
Confidence            99999998764

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.41  E-value=1.9e-12  Score=70.55  Aligned_cols=86  Identities=17%  Similarity=0.183  Sum_probs=64.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|++.+.||+|+||.||++....++.    .+++|.+..... ......+..++..+..+. |||++++++.+. ....
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~l~~l~-h~~iv~~~~~~~-~~~~   83 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG-RQTFQEITDHMLAMGSLD-HAYIVRLLGICP-GASL   83 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc-hHHHHHHHHHHHHHhcCC-CCCcceEEEEEC-CCcc
Confidence            568889999999999999998866654    467777643321 122345667777788888 899999998764 4557


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++|++++|+|.
T Consensus        84 ~~i~e~~~~gsL~   96 (279)
T cd05111          84 QLVTQLSPLGSLL   96 (279)
T ss_pred             EEEEEeCCCCcHH
Confidence            8999999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.41  E-value=2.2e-12  Score=71.65  Aligned_cols=83  Identities=22%  Similarity=0.344  Sum_probs=69.3

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----eE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----DM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----~~   77 (91)
                      +|.+.+.||+|++|.||++....++..+++|.+..........+.+.+|+..++.++ |+|++++.+.+....     ..
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~~   79 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFNDV   79 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccce
Confidence            588999999999999999999888899999998764322333456888999999998 899999998877664     78


Q ss_pred             EEEEeccCC
Q psy8005          78 ILLLELLDL   86 (91)
Q Consensus        78 ~lv~e~~~~   86 (91)
                      ++++||+++
T Consensus        80 ~lv~e~~~~   88 (330)
T cd07834          80 YIVTELMET   88 (330)
T ss_pred             EEEecchhh
Confidence            999999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.41  E-value=5.9e-12  Score=67.96  Aligned_cols=79  Identities=19%  Similarity=0.365  Sum_probs=62.2

Q ss_pred             eecCcCeeEEEEEEEc--cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           9 SFPLGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      .||+|+||.||.+...  ..+..+++|.+..... ....+.+.+|+.+++.+. |+|++++.+.+. .+..+++|||+++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~-~~~~~lv~e~~~~   78 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE-KSVRDEMMREAEIMHQLD-NPYIVRMIGVCE-AEALMLVMEMASG   78 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccC-hHHHHHHHHHHHHHHhcC-CCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence            4899999999998764  3345689998865432 233456889999999998 899999998875 4568999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      ++|.
T Consensus        79 ~~L~   82 (257)
T cd05115          79 GPLN   82 (257)
T ss_pred             CCHH
Confidence            9874

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG4257|consensus

Probab=99.41  E-value=7.8e-13  Score=78.34  Aligned_cols=81  Identities=19%  Similarity=0.282  Sum_probs=65.2

Q ss_pred             eceecCcCeeEEEEEEEccC--C--cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           7 TKSFPLGKYATVRRCRDRKN--G--TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~--~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .+.||.|-||.||.|.....  |  ..||+|.-+..- ..+.++.|+.|..++++++ ||||+++.+.+. ..+.|+|||
T Consensus       394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfd-HphIikLIGv~~-e~P~WivmE  470 (974)
T KOG4257|consen  394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFD-HPHIIKLIGVCV-EQPMWIVME  470 (974)
T ss_pred             HHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCC-Ccchhheeeeee-ccceeEEEe
Confidence            56899999999999987543  2  367788765432 2344788999999999999 899999999986 456999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      +++.|+|.
T Consensus       471 L~~~GELr  478 (974)
T KOG4257|consen  471 LAPLGELR  478 (974)
T ss_pred             cccchhHH
Confidence            99999874

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.41  E-value=1.2e-12  Score=70.43  Aligned_cols=78  Identities=13%  Similarity=0.231  Sum_probs=61.5

Q ss_pred             ceecCcCeeEEEEEEEccCC----------cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           8 KSFPLGKYATVRRCRDRKNG----------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~----------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +.||+|+||.||++.....+          ..+++|.+......   ...+.+++.+++.++ |+|++++++.+.. +..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLS-HKHLVKLYGVCVR-DEN   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCC-CcchhheeeEEec-CCc
Confidence            46899999999999887655          34677766543211   456788889999998 8999999998776 678


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++||+++|+|.
T Consensus        76 ~lv~e~~~~~~L~   88 (259)
T cd05037          76 IMVEEYVKFGPLD   88 (259)
T ss_pred             EEEEEcCCCCcHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.41  E-value=5.6e-12  Score=73.15  Aligned_cols=75  Identities=16%  Similarity=0.090  Sum_probs=64.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|.+.+.||+|+||.||++.+...+..+++|....        ....+|+.+++.++ |+||+++++.+......++++|
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~~~lv~e  240 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLS-HPAVLALLDVRVVGGLTCLVLP  240 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEEEEE
Confidence            58889999999999999999988889999995321        23567999999998 8999999999888889999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ++.+
T Consensus       241 ~~~~  244 (461)
T PHA03211        241 KYRS  244 (461)
T ss_pred             ccCC
Confidence            8853

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.41  E-value=8.8e-12  Score=67.99  Aligned_cols=81  Identities=23%  Similarity=0.360  Sum_probs=60.3

Q ss_pred             eecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHH-HHHHHHH---HHHHhcCCCCCeeeeheeeeeCCeEEEEEecc
Q psy8005           9 SFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLK-AEILHEV---AVLEACRCNSRIVQLHQVFESSHDMILLLELL   84 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~   84 (91)
                      .||+|+||.||.+.+..++..+|+|.+.......... .....+.   ..++... ||+++++.+.+...+..++++||+
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e~~   79 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKLSFILDLM   79 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCC-CCcEeeeeeeeecCCEEEEEEecC
Confidence            4799999999999988888999999987653321111 1122232   2333444 799999999999899999999999


Q ss_pred             CCCCCC
Q psy8005          85 DLNHHQ   90 (91)
Q Consensus        85 ~~g~L~   90 (91)
                      ++++|.
T Consensus        80 ~g~~L~   85 (278)
T cd05606          80 NGGDLH   85 (278)
T ss_pred             CCCcHH
Confidence            999873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.41  E-value=8.8e-12  Score=68.05  Aligned_cols=82  Identities=24%  Similarity=0.353  Sum_probs=60.5

Q ss_pred             eecCcCeeEEEEEEEccCCcEEEEEEeccccCchhH-HHHHHHHHHHHHhc--CCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           9 SFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KAEILHEVAVLEAC--RCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      .||+|+||.||++.+..++..+++|.+.+....... .....++...++.+  .+|++++.+.+.+...+..+++|||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            479999999999999888899999998765332111 12233333333322  237999999999988889999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +++|.
T Consensus        81 ~~~L~   85 (279)
T cd05633          81 GGDLH   85 (279)
T ss_pred             CCCHH
Confidence            99874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.40  E-value=7e-12  Score=68.24  Aligned_cols=87  Identities=10%  Similarity=0.110  Sum_probs=68.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~~   76 (91)
                      ++|.+.+.||+|+||.||.+....    .+..+++|.+.... .......+.+|+.+++.++ |+|++++.+.+.. +..
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLS-HQNILPILHVCIEDGEP   83 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCCC
Confidence            578889999999999999998765    24678888875432 2333455888999999998 8999999887554 567


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++|++++++|.
T Consensus        84 ~~~~~~~~~~~~L~   97 (280)
T cd05043          84 PFVLYPYMNWGNLK   97 (280)
T ss_pred             CEEEEEcCCCCcHH
Confidence            89999999988764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.40  E-value=5.8e-12  Score=70.31  Aligned_cols=83  Identities=16%  Similarity=0.283  Sum_probs=67.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-----Ce
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-----~~   76 (91)
                      ++|.+.+.||+|++|.||.+.+..++..+++|.+..... ......+..|+.+++.+. |+|++++++.+...     ..
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~   82 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFESFND   82 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCC-CCCcCchhheeecccccccce
Confidence            579999999999999999999988899999999864321 222445778999999998 89999998875543     35


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .++++|++++
T Consensus        83 ~~lv~e~~~~   92 (336)
T cd07849          83 VYIVQELMET   92 (336)
T ss_pred             EEEEehhccc
Confidence            7999999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.40  E-value=5.5e-12  Score=70.61  Aligned_cols=84  Identities=21%  Similarity=0.326  Sum_probs=67.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      .+|.+.+.||+|++|.||++.+..++..+++|.+............+.+++.+++.+. |+|++++.+++....      
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ-HENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcC-CCCccchhheecccccCCCCc
Confidence            5788899999999999999998888999999998754322223345778999999998 899999998876442      


Q ss_pred             eEEEEEeccCC
Q psy8005          76 DMILLLELLDL   86 (91)
Q Consensus        76 ~~~lv~e~~~~   86 (91)
                      ..++++|++..
T Consensus        94 ~~~lv~e~~~~  104 (342)
T cd07879          94 DFYLVMPYMQT  104 (342)
T ss_pred             eEEEEeccccc
Confidence            45899998753

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.39  E-value=5e-12  Score=68.42  Aligned_cols=79  Identities=13%  Similarity=0.164  Sum_probs=61.3

Q ss_pred             ceecCcCeeEEEEEEEcc------------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC
Q psy8005           8 KSFPLGKYATVRRCRDRK------------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   75 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~------------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~   75 (91)
                      +.||+|+||.||++....            ....+++|.+....  ......+..++.++..+. |||++++++.+....
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVS-HKHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCC
Confidence            368999999999997432            12257888875542  223445778888999998 899999999988888


Q ss_pred             eEEEEEeccCCCCC
Q psy8005          76 DMILLLELLDLNHH   89 (91)
Q Consensus        76 ~~~lv~e~~~~g~L   89 (91)
                      ..++++||+++++|
T Consensus        78 ~~~lv~e~~~~~~l   91 (262)
T cd05077          78 ENIMVEEFVEFGPL   91 (262)
T ss_pred             CCEEEEecccCCCH
Confidence            89999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.39  E-value=5.6e-12  Score=68.65  Aligned_cols=86  Identities=21%  Similarity=0.244  Sum_probs=67.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|++.+.||+|+||.||++....++.    .+++|.+..... ......+..+...+..+. |+|++++.+.+.. ...
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~-~~~   83 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVG-SPYVCRLLGICLT-STV   83 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcC-CCCCceEEEEEcC-CCc
Confidence            467889999999999999998765554    478998865432 223445778888899988 8999999887754 457


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++|++++|+|.
T Consensus        84 ~l~~~~~~~g~l~   96 (279)
T cd05109          84 QLVTQLMPYGCLL   96 (279)
T ss_pred             EEEEEcCCCCCHH
Confidence            8999999999874

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0579|consensus

Probab=99.39  E-value=2.1e-14  Score=85.17  Aligned_cols=84  Identities=19%  Similarity=0.297  Sum_probs=71.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|.++..||.|+||+||++....++...|.|.+....  ...-+.++-|++++.... ||+|++|++.|.-.+.+|++.|
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks--eEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS--EEELEDYLVEIEILAECD-HPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc--hhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCceEEEEe
Confidence            4567889999999999999998888888889887543  223456888999999998 8999999999888889999999


Q ss_pred             ccCCCCC
Q psy8005          83 LLDLNHH   89 (91)
Q Consensus        83 ~~~~g~L   89 (91)
                      ||+||-.
T Consensus       110 FC~GGAV  116 (1187)
T KOG0579|consen  110 FCGGGAV  116 (1187)
T ss_pred             ecCCchH
Confidence            9999864

>KOG2052|consensus

Probab=99.39  E-value=1e-12  Score=74.73  Aligned_cols=80  Identities=15%  Similarity=0.248  Sum_probs=63.0

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHh--cCCCCCeeeeheeeeeC----CeE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA--CRCNSRIVQLHQVFESS----HDM   77 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~~~~~----~~~   77 (91)
                      ..+.+.||+|.||.||+|.++  |..||||+...+.     -..+.+|.++.++  +. |+||+...+.-..+    .++
T Consensus       213 I~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLR-HENILgFIaaD~~~~gs~TQL  284 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLR-HENILGFIAADNKDNGSWTQL  284 (513)
T ss_pred             eEEEEEecCccccceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhc-cchhhhhhhccccCCCceEEE
Confidence            456789999999999999875  7889999986543     2236678887776  55 89999987765433    268


Q ss_pred             EEEEeccCCCCCCC
Q psy8005          78 ILLLELLDLNHHQA   91 (91)
Q Consensus        78 ~lv~e~~~~g~L~~   91 (91)
                      |||.||-+.|+|++
T Consensus       285 wLvTdYHe~GSL~D  298 (513)
T KOG2052|consen  285 WLVTDYHEHGSLYD  298 (513)
T ss_pred             EEeeecccCCcHHH
Confidence            99999999999975

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.39  E-value=8.3e-12  Score=69.90  Aligned_cols=82  Identities=15%  Similarity=0.179  Sum_probs=67.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-------   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-------   74 (91)
                      .+|.+.+.||.|+||.||++.+..++..+++|.+.....  .....+.+|+.+++.++ |||++++++.+...       
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~   81 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDLTED   81 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcC-CCcchhhHhhhcccccccccc
Confidence            478899999999999999999998899999999865543  22445788999999998 89999998766543       


Q ss_pred             -------CeEEEEEeccCC
Q psy8005          75 -------HDMILLLELLDL   86 (91)
Q Consensus        75 -------~~~~lv~e~~~~   86 (91)
                             ...++++||+++
T Consensus        82 ~~~~~~~~~~~lv~e~~~~  100 (342)
T cd07854          82 VGSLTELNSVYIVQEYMET  100 (342)
T ss_pred             cccccccceEEEEeecccc
Confidence                   357899999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1151|consensus

Probab=99.39  E-value=1.2e-13  Score=79.15  Aligned_cols=87  Identities=16%  Similarity=0.196  Sum_probs=71.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-----hHHHHHHHHHHHHHhcCCCCCeeeeheeee-eCCe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-----DLKAEILHEVAVLEACRCNSRIVQLHQVFE-SSHD   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~   76 (91)
                      .|.+...||+|+|+.||++++....+.+|+|+-+......     ....+..+|-.+.+.++ ||.|+++++++. +.+.
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD-HpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD-HPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC-cceeeeeeeeeeecccc
Confidence            4667789999999999999999888899999876543322     23455788999999999 899999999986 4567


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      ++-|+|||+|.+|.
T Consensus       543 FCTVLEYceGNDLD  556 (775)
T KOG1151|consen  543 FCTVLEYCEGNDLD  556 (775)
T ss_pred             ceeeeeecCCCchh
Confidence            89999999999873

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.39  E-value=5.8e-12  Score=68.28  Aligned_cols=85  Identities=18%  Similarity=0.244  Sum_probs=65.9

Q ss_pred             ceeeceecCcCeeEEEEEEEcc---CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----
Q psy8005           4 TKITKSFPLGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----   75 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----   75 (91)
                      |.+.+.||+|+||.||++....   ++..+++|.+..........+.+.+|+.+++.+. |||++++++.+....     
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~   79 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGRL   79 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCcc
Confidence            5677899999999999997543   4678999998765433333456888999999998 899999998764322     


Q ss_pred             -eEEEEEeccCCCCC
Q psy8005          76 -DMILLLELLDLNHH   89 (91)
Q Consensus        76 -~~~lv~e~~~~g~L   89 (91)
                       ..++++||+++|+|
T Consensus        80 ~~~~~~~~~~~~~~l   94 (273)
T cd05074          80 PIPMVILPFMKHGDL   94 (273)
T ss_pred             cceEEEEecCCCCcH
Confidence             24788899988876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.39  E-value=1e-11  Score=67.60  Aligned_cols=83  Identities=25%  Similarity=0.321  Sum_probs=65.1

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcC--CCCCeeeeheeeeeCCe-----
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQVFESSHD-----   76 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~~-----   76 (91)
                      |++.+.||+|++|.||++....++..+++|.+............+.+|+.++..+.  .|+|++++.+.+...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            67889999999999999999888899999999754332222334556777666653  28999999999887766     


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .++++|++++
T Consensus        81 ~~l~~e~~~~   90 (287)
T cd07838          81 LTLVFEHVDQ   90 (287)
T ss_pred             eEEEehhccc
Confidence            8999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.38  E-value=4.3e-12  Score=69.93  Aligned_cols=86  Identities=20%  Similarity=0.234  Sum_probs=66.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|+..+.||+|+||.||++.+..++.    .+++|.+..... ......+.+++.+++.++ |||++++++.+... ..
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~-~~   83 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMD-HPHLVRLLGVCLSP-TI   83 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCC-CCCcccEEEEEcCC-Cc
Confidence            467788899999999999998766654    468888765432 222345788899999998 89999999987654 46


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++||+++|+|.
T Consensus        84 ~~v~e~~~~g~l~   96 (303)
T cd05110          84 QLVTQLMPHGCLL   96 (303)
T ss_pred             eeeehhcCCCCHH
Confidence            7899999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.37  E-value=1e-11  Score=68.69  Aligned_cols=75  Identities=21%  Similarity=0.377  Sum_probs=59.8

Q ss_pred             eceecCcCeeEEEEEEEc--cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeEEEEEe
Q psy8005           7 TKSFPLGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMILLLE   82 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~lv~e   82 (91)
                      ...||+|+||.||++...  ..+..+++|.+.....    .....+|+.+++.++ |||++++.+.+..  ....++++|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLFD   80 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEEe
Confidence            568999999999999865  3567899999865432    234678999999998 8999999888743  456899999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      |+++
T Consensus        81 ~~~~   84 (317)
T cd07868          81 YAEH   84 (317)
T ss_pred             ccCC
Confidence            9865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.37  E-value=9.9e-12  Score=69.30  Aligned_cols=83  Identities=18%  Similarity=0.279  Sum_probs=66.5

Q ss_pred             cce-eeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh------------HHHHHHHHHHHHHhcCCCCCeeeehe
Q psy8005           3 NTK-ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD------------LKAEILHEVAVLEACRCNSRIVQLHQ   69 (91)
Q Consensus         3 ~~~-~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~i~~l~~   69 (91)
                      .|. +.+.||.|+||.||++.+...+..+++|.+........            ....+.+|+.+++.+. |+|++++++
T Consensus         9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~   87 (335)
T PTZ00024          9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMGLVD   87 (335)
T ss_pred             chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-CcceeeeeE
Confidence            454 45779999999999999988899999999865432110            0113678999999998 899999999


Q ss_pred             eeeeCCeEEEEEeccCC
Q psy8005          70 VFESSHDMILLLELLDL   86 (91)
Q Consensus        70 ~~~~~~~~~lv~e~~~~   86 (91)
                      .+...+..+++||++++
T Consensus        88 ~~~~~~~~~lv~e~~~~  104 (335)
T PTZ00024         88 VYVEGDFINLVMDIMAS  104 (335)
T ss_pred             EEecCCcEEEEEecccc
Confidence            99988999999999974

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.37  E-value=1.2e-11  Score=65.09  Aligned_cols=85  Identities=26%  Similarity=0.425  Sum_probs=71.8

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |.+.+.|++|.++.+|++.....+..+++|.+...... .....+.+|+..++.+. |+|++++++.+......++++|+
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e~   78 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLK-HPNIVKLYGVFEDPEPLYLVMEY   78 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCC-CCChhhheeeeecCCceEEEEec
Confidence            56778999999999999998877889999999765432 12456888999999997 79999999998888889999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus        79 ~~~~~L~   85 (225)
T smart00221       79 CEGGDLF   85 (225)
T ss_pred             cCCCCHH
Confidence            9988764

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0658|consensus

Probab=99.37  E-value=5.1e-13  Score=73.99  Aligned_cols=77  Identities=21%  Similarity=0.278  Sum_probs=60.1

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----eE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----DM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----~~   77 (91)
                      .|...+.+|+|+||.||.+....++..+|+|....+...      --+|+.+|+.+. ||||++|...|....     +.
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~------knrEl~im~~l~-HpNIV~L~~~f~~~~~~d~~~l   97 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY------KNRELQIMRKLD-HPNIVRLLYFFSSSTESDEVYL   97 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc------CcHHHHHHHhcC-CcCeeeEEEEEEecCCCchhHH
Confidence            355678999999999999999888899999988765421      235888999888 899999977765332     34


Q ss_pred             EEEEeccCC
Q psy8005          78 ILLLELLDL   86 (91)
Q Consensus        78 ~lv~e~~~~   86 (91)
                      .+||||+|.
T Consensus        98 nlVleymP~  106 (364)
T KOG0658|consen   98 NLVLEYMPE  106 (364)
T ss_pred             HHHHHhchH
Confidence            579999874

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.36  E-value=1.6e-11  Score=67.83  Aligned_cols=82  Identities=21%  Similarity=0.245  Sum_probs=67.6

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      |...+.||+|++|.||++.+..++..+++|.+..... .......+.+|+.+++.++ |+|++++.+.+......++++|
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeEEEEE
Confidence            5567789999999999999988888999998864322 1223345778999999998 8999999999888889999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      |+.+
T Consensus        96 ~~~~   99 (308)
T cd06634          96 YCLG   99 (308)
T ss_pred             ccCC
Confidence            9974

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.36  E-value=2.4e-11  Score=67.19  Aligned_cols=76  Identities=20%  Similarity=0.369  Sum_probs=60.1

Q ss_pred             eceecCcCeeEEEEEEEcc--CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee--eCCeEEEEEe
Q psy8005           7 TKSFPLGKYATVRRCRDRK--NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE--SSHDMILLLE   82 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~--~~~~~~lv~e   82 (91)
                      ...||+|+||.||++....  .+..+++|.+.....    ...+.+|+.+++.++ |||++++.+.+.  .....++++|
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLFD   80 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEEe
Confidence            4689999999999998653  457899998865432    234678999999998 899999988874  3557899999


Q ss_pred             ccCCC
Q psy8005          83 LLDLN   87 (91)
Q Consensus        83 ~~~~g   87 (91)
                      |++++
T Consensus        81 ~~~~~   85 (317)
T cd07867          81 YAEHD   85 (317)
T ss_pred             eeCCc
Confidence            98753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG1152|consensus

Probab=99.35  E-value=2.6e-12  Score=75.36  Aligned_cols=82  Identities=20%  Similarity=0.260  Sum_probs=67.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHH------HHHHHHHHHHHhcCC--CCCeeeeheeeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLK------AEILHEVAVLEACRC--NSRIVQLHQVFES   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~i~~l~~~~~~   73 (91)
                      .+|...+.+|.|+||+|+.|.++...-.|++|.+.+...-.+..      ..+-.|+.+|..++.  |+||+++.+.|++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            46888999999999999999999888899999998764322211      125678889988873  7999999999999


Q ss_pred             CCeEEEEEec
Q psy8005          74 SHDMILLLEL   83 (91)
Q Consensus        74 ~~~~~lv~e~   83 (91)
                      +++.|+++|-
T Consensus       641 dd~yyl~te~  650 (772)
T KOG1152|consen  641 DDYYYLETEV  650 (772)
T ss_pred             CCeeEEEecC
Confidence            9999999984

>KOG0668|consensus

Probab=99.35  E-value=2e-13  Score=72.44  Aligned_cols=81  Identities=21%  Similarity=0.342  Sum_probs=68.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC--eEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~--~~~l   79 (91)
                      ++|++.+.+|+|.++.||.|....+..++++|.+.+-.     .....+|+.++.++.++|||+++.+...++.  ...+
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            67899999999999999999988888999999996532     4468899999999998999999999887543  5678


Q ss_pred             EEeccCCC
Q psy8005          80 LLELLDLN   87 (91)
Q Consensus        80 v~e~~~~g   87 (91)
                      ++|+++.-
T Consensus       113 iFE~v~n~  120 (338)
T KOG0668|consen  113 IFEYVNNT  120 (338)
T ss_pred             Hhhhhccc
Confidence            99988653

>KOG4645|consensus

Probab=99.35  E-value=6.7e-14  Score=87.18  Aligned_cols=87  Identities=15%  Similarity=0.139  Sum_probs=72.2

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      ++-...||.|.||+||.+.+..+|...|+|.+.-..........+..|..++..+. |||+++++++-.-.+..++.|||
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhcc-CccccccCceeecHHHHHHHHHH
Confidence            45567899999999999999999999999998754332222345788999999999 89999999987777789999999


Q ss_pred             cCCCCCCC
Q psy8005          84 LDLNHHQA   91 (91)
Q Consensus        84 ~~~g~L~~   91 (91)
                      |.+|+|.+
T Consensus      1316 C~~GsLa~ 1323 (1509)
T KOG4645|consen 1316 CEGGSLAS 1323 (1509)
T ss_pred             hccCcHHH
Confidence            99999863

>KOG0986|consensus

Probab=99.34  E-value=8.9e-13  Score=75.39  Aligned_cols=89  Identities=27%  Similarity=0.381  Sum_probs=75.1

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHH-HHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLK-AEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +..|..-+.||+|+||.|+-|.-..+|.-+|.|.+++.......- ...++|-.++..++ .+.|+.+-..+++.+.+++
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd~LCl  262 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-SPFIVSLAYAFETKDALCL  262 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCCceEE
Confidence            356777889999999999999999999999999998765443222 23677888889888 5999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      |+..|+||+|.
T Consensus       263 VLtlMNGGDLk  273 (591)
T KOG0986|consen  263 VLTLMNGGDLK  273 (591)
T ss_pred             EEEeecCCcee
Confidence            99999999983

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.34  E-value=3.5e-11  Score=67.10  Aligned_cols=84  Identities=20%  Similarity=0.228  Sum_probs=64.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccC--CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKN--GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHD   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~   76 (91)
                      +|.+.+.||+|+||.||++.+...  +..+++|.+..........+.+.+|+.+++.+.+|||++++++....    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            478899999999999999998877  78999999865432222344577899999998668999999876432    245


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .++++|++++
T Consensus        81 ~~~~~e~~~~   90 (332)
T cd07857          81 LYLYEELMEA   90 (332)
T ss_pred             EEEEEecccC
Confidence            7889998763

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.33  E-value=2.9e-11  Score=66.81  Aligned_cols=76  Identities=12%  Similarity=0.142  Sum_probs=60.6

Q ss_pred             CeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          14 KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        14 ~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      +.+.++.+....++..+|+|.+............+..|+.+++.++ |+|++++.+.+...+..++++||+++++|.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   87 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLMAYGSCE   87 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence            3345666666668899999999765333333456889999999998 899999999999999999999999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1035|consensus

Probab=99.32  E-value=8.6e-13  Score=81.96  Aligned_cols=70  Identities=23%  Similarity=0.357  Sum_probs=59.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~   73 (91)
                      .+|...+.||+|+||.|+++.++-+|+.||+|.|+... .........+|+.++.+++ |||+++++..|..
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLn-HpNVVRYysAWVE  548 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLN-HPNVVRYYSAWVE  548 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcC-Ccceeeeehhhhc
Confidence            45677889999999999999999999999999998765 3333456889999999999 8999999887644

>KOG4721|consensus

Probab=99.32  E-value=1.1e-12  Score=77.10  Aligned_cols=73  Identities=15%  Similarity=0.113  Sum_probs=59.6

Q ss_pred             eeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         6 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      ..+.+|+|+.|-||.+...  +..||||.+..-         --.++.-|+.+. |+|||...+.+......+++||||.
T Consensus       128 ELeWlGSGaQGAVF~Grl~--netVAVKKV~el---------kETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa  195 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLH--NETVAVKKVREL---------KETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCA  195 (904)
T ss_pred             hhhhhccCcccceeeeecc--CceehhHHHhhh---------hhhhHHHHHhcc-CcceeeEeeeecCCceeEEeeeccc
Confidence            4678999999999999753  578899876321         123566678888 8999999999999999999999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      .|.|+
T Consensus       196 ~GqL~  200 (904)
T KOG4721|consen  196 QGQLY  200 (904)
T ss_pred             cccHH
Confidence            99875

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.32  E-value=3.3e-11  Score=68.68  Aligned_cols=76  Identities=13%  Similarity=0.204  Sum_probs=62.8

Q ss_pred             cceeeceecCcCeeEEEEEEEcc--CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRK--NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .|.+.+.||+|+||.||.+....  .+..+++|.+....       ...+|+.+++.++ |||++++++.+......+++
T Consensus        93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv  164 (392)
T PHA03207         93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTIS-HRAIINLIHAYRWKSTVCMV  164 (392)
T ss_pred             ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcC-CCCccceeeeEeeCCEEEEE
Confidence            58899999999999999987543  35678888875432       2457899999998 89999999999888899999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      ||++.+
T Consensus       165 ~e~~~~  170 (392)
T PHA03207        165 MPKYKC  170 (392)
T ss_pred             ehhcCC
Confidence            999864

>KOG0200|consensus

Probab=99.30  E-value=2.3e-11  Score=72.67  Aligned_cols=86  Identities=19%  Similarity=0.206  Sum_probs=71.0

Q ss_pred             ceeeceecCcCeeEEEEEEEcc-------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           4 TKITKSFPLGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ..+.+.+|+|.||+|+++....       ....+|+|.+...... ...+.+..|+.+++.+..|+|++.+.+.+....+
T Consensus       298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~  376 (609)
T KOG0200|consen  298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP  376 (609)
T ss_pred             ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence            3456699999999999886431       1347899998765543 4466799999999999999999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++.||+..|+|.
T Consensus       377 ~~~v~Ey~~~G~L~  390 (609)
T KOG0200|consen  377 LYVIVEYAEHGDLL  390 (609)
T ss_pred             eEEEEEeccCCcHH
Confidence            99999999999874

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.29  E-value=1.4e-11  Score=72.19  Aligned_cols=84  Identities=13%  Similarity=0.328  Sum_probs=59.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc-EEEEEE--------------eccc-cCchhHHHHHHHHHHHHHhcCCCCCee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT-QYAAKF--------------LRKK-RRSTDLKAEILHEVAVLEACRCNSRIV   65 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~-~~~~k~--------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~   65 (91)
                      ++|++.+.||+|+||.||.+....... ..+.|.              +.+. .........+.+|+.+++.++ |+||+
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-HpnIv  226 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-HENIL  226 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-CCCcC
Confidence            468999999999999999986543221 111111              1010 001112345788999999998 89999


Q ss_pred             eeheeeeeCCeEEEEEeccCC
Q psy8005          66 QLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus        66 ~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      ++++++...+..+++++++.+
T Consensus       227 ~l~~~~~~~~~~~lv~e~~~~  247 (501)
T PHA03210        227 KIEEILRSEANTYMITQKYDF  247 (501)
T ss_pred             cEeEEEEECCeeEEEEecccc
Confidence            999999999999999998754

>KOG0604|consensus

Probab=99.29  E-value=4.5e-13  Score=73.30  Aligned_cols=83  Identities=17%  Similarity=0.294  Sum_probs=68.2

Q ss_pred             Ccceee-ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCe
Q psy8005           2 VNTKIT-KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHD   76 (91)
Q Consensus         2 ~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~   76 (91)
                      ++|.+. +.||-|.-|+|..|..+.++.++|+|.+...       +..++|+++.-..+.||||+++.+.++.    ..+
T Consensus        61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            466663 6899999999999999999999999988533       3466788877777779999999988754    357


Q ss_pred             EEEEEeccCCCCCCC
Q psy8005          77 MILLLELLDLNHHQA   91 (91)
Q Consensus        77 ~~lv~e~~~~g~L~~   91 (91)
                      +.+|||.++||+|++
T Consensus       134 LLiVmE~meGGeLfs  148 (400)
T KOG0604|consen  134 LLIVMECMEGGELFS  148 (400)
T ss_pred             eEeeeecccchHHHH
Confidence            889999999999873

>KOG2345|consensus

Probab=99.29  E-value=2.2e-12  Score=68.91  Aligned_cols=86  Identities=17%  Similarity=0.190  Sum_probs=71.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee-----eCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-----SSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-----~~~~   76 (91)
                      ..|.+.+.+|+|+|+.|+.++...++..+|+|.+....  ....+..++|++..+.++ |||++++.+...     ....
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFN-SPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhccCcee
Confidence            46889999999999999999999999999999987654  233566899999999999 799999876543     2346


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .|+++.|...|+|+
T Consensus        98 ~yll~Pyy~~Gsl~  111 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLL  111 (302)
T ss_pred             EEEEeehhccccHH
Confidence            89999999998875

>PRK10345 hypothetical protein; Provisional

Probab=99.29  E-value=3.7e-11  Score=63.49  Aligned_cols=83  Identities=10%  Similarity=0.043  Sum_probs=60.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcC----CCCCeeeeheeeeeCC---
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR----CNSRIVQLHQVFESSH---   75 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~l~~~~~~~~---   75 (91)
                      ++.-.+.||+|+++.||.  +...... ++|.+......  ....+.+|+..++.+.    .||||+++++.++++.   
T Consensus         3 ~L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g   77 (210)
T PRK10345          3 RLSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG   77 (210)
T ss_pred             ecCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence            344567899999999995  5545444 68887654321  2346899999999984    2799999999998874   


Q ss_pred             eEE-EEEec--cCCCCCC
Q psy8005          76 DMI-LLLEL--LDLNHHQ   90 (91)
Q Consensus        76 ~~~-lv~e~--~~~g~L~   90 (91)
                      .++ +++||  +++++|.
T Consensus        78 ~v~~~I~e~~G~~~~tL~   95 (210)
T PRK10345         78 YVYDVIADFDGKPSITLT   95 (210)
T ss_pred             EEEEEEecCCCCcchhHH
Confidence            444 78999  5577774

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.28  E-value=4.2e-11  Score=64.59  Aligned_cols=81  Identities=12%  Similarity=0.169  Sum_probs=61.1

Q ss_pred             ceecCcCeeEEEEEEEccC---CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee-eCCeEEEEEec
Q psy8005           8 KSFPLGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-SSHDMILLLEL   83 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~~~lv~e~   83 (91)
                      +.||+|+||.||++.....   ...+++|.+..... ......+.+|+.+++.++ |||++++++.+. .++..++++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD-LEEVEQFLKEGIIMKDFS-HPNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCC-HHHHHHHHHHHHHHccCC-CCCcceEEEEeecCCCCcEEEEec
Confidence            3689999999999986432   34788998754321 222456778999999998 899999988654 45567899999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus        79 ~~~~~L~   85 (262)
T cd05058          79 MKHGDLR   85 (262)
T ss_pred             CCCCCHH
Confidence            9998874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.26  E-value=3.6e-11  Score=62.69  Aligned_cols=79  Identities=16%  Similarity=0.113  Sum_probs=52.6

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhH------------------------HHHHHHHHHHHHhcCCCC
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL------------------------KAEILHEVAVLEACRCNS   62 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~   62 (91)
                      ...||+|++|.||.+.+. +|..+|+|.+.........                        ......|...+..+. ++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~   79 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA   79 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence            468999999999999886 7899999999754211000                        112345788888886 45


Q ss_pred             CeeeeheeeeeCCeEEEEEeccCCCCC
Q psy8005          63 RIVQLHQVFESSHDMILLLELLDLNHH   89 (91)
Q Consensus        63 ~i~~l~~~~~~~~~~~lv~e~~~~g~L   89 (91)
                      ++.... ...... .+++|||++++++
T Consensus        80 ~v~~p~-~~~~~~-~~iVmE~i~g~~l  104 (190)
T cd05147          80 GIPCPE-PILLKS-HVLVMEFIGDDGW  104 (190)
T ss_pred             CCCCCc-EEEecC-CEEEEEEeCCCCC
Confidence            553322 222222 3899999998765

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1025|consensus

Probab=99.26  E-value=1.7e-12  Score=78.70  Aligned_cols=83  Identities=20%  Similarity=0.198  Sum_probs=67.5

Q ss_pred             eeceecCcCeeEEEEEEEccCCc----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           6 ITKSFPLGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         6 ~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ..+.||+|+||.||+|.+...+.    +|++|++...... ....+++.|.-.+..++ |||++++.+.+..+. +.||+
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~-~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP-KASIELLDEALRMASLD-HPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc-hhhHHHHHHHHHHhcCC-CchHHHHhhhcccch-HHHHH
Confidence            35789999999999998765443    7899988765432 33567999999999999 899999999887665 78999


Q ss_pred             eccCCCCCCC
Q psy8005          82 ELLDLNHHQA   91 (91)
Q Consensus        82 e~~~~g~L~~   91 (91)
                      +|+|.|.|.+
T Consensus       777 q~mP~G~LlD  786 (1177)
T KOG1025|consen  777 QLMPLGCLLD  786 (1177)
T ss_pred             HhcccchHHH
Confidence            9999998853

>PTZ00284 protein kinase; Provisional

Probab=99.25  E-value=1.2e-10  Score=67.68  Aligned_cols=81  Identities=19%  Similarity=0.280  Sum_probs=58.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcC-----CCCCeeeeheeeeeC-C
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-----CNSRIVQLHQVFESS-H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~~~~~~~-~   75 (91)
                      .+|++.+.||+|+||.||++.+...+..+|+|.+....   ........|+.++..+.     ++.+++++.+.+... .
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~  205 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG  205 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence            46888999999999999999998888999999986431   11223445666655554     145678887777654 4


Q ss_pred             eEEEEEeccC
Q psy8005          76 DMILLLELLD   85 (91)
Q Consensus        76 ~~~lv~e~~~   85 (91)
                      ..+++||++.
T Consensus       206 ~~~iv~~~~g  215 (467)
T PTZ00284        206 HMCIVMPKYG  215 (467)
T ss_pred             eEEEEEeccC
Confidence            6889999873

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.21  E-value=7e-10  Score=57.55  Aligned_cols=79  Identities=30%  Similarity=0.499  Sum_probs=66.5

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHH   89 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~L   89 (91)
                      ||+|.+|.+|++.....+..+++|......... ....+.+|+..++.+. |++++++.+.+......++++|++++++|
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            689999999999988778899999987654321 2356889999999998 69999999999888899999999998776


Q ss_pred             C
Q psy8005          90 Q   90 (91)
Q Consensus        90 ~   90 (91)
                      .
T Consensus        79 ~   79 (215)
T cd00180          79 K   79 (215)
T ss_pred             H
Confidence            4

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.21  E-value=1.2e-10  Score=62.32  Aligned_cols=70  Identities=20%  Similarity=0.178  Sum_probs=55.7

Q ss_pred             cCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        13 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      |.++.||.+.+..++..+++|.+.....       ...+...+.... |||++++++.+...+..+++|||+++|+|.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   73 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------YSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLW   73 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh-------hhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHH
Confidence            7899999999999999999999865421       112233333444 799999999999889999999999999874

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1290|consensus

Probab=99.18  E-value=3.1e-10  Score=65.69  Aligned_cols=80  Identities=21%  Similarity=0.375  Sum_probs=65.0

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC-------CCCeeeeheeeee--
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-------NSRIVQLHQVFES--   73 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~l~~~~~~--   73 (91)
                      .|.+.+.||.|.|++||.+.+....+.||+|+...+.   ..++...-|+.+++++..       ...|++|++.|.-  
T Consensus        79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             eEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            5889999999999999999999999999999987653   346678889999988663       2468899887753  


Q ss_pred             --CCeEEEEEeccC
Q psy8005          74 --SHDMILLLELLD   85 (91)
Q Consensus        74 --~~~~~lv~e~~~   85 (91)
                        ...++||+|++.
T Consensus       156 pNG~HVCMVfEvLG  169 (590)
T KOG1290|consen  156 PNGQHVCMVFEVLG  169 (590)
T ss_pred             CCCcEEEEEehhhh
Confidence              347899999874

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.18  E-value=3.8e-10  Score=58.80  Aligned_cols=79  Identities=18%  Similarity=0.196  Sum_probs=53.5

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh------------------------HHHHHHHHHHHHHhcCCCC
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD------------------------LKAEILHEVAVLEACRCNS   62 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~   62 (91)
                      .+.||+|++|.||++.+. +|..+|+|.+........                        .......|...+..+. ++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~   79 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA   79 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence            568999999999999876 789999999976421100                        0112356778888887 57


Q ss_pred             CeeeeheeeeeCCeEEEEEeccCCCCC
Q psy8005          63 RIVQLHQVFESSHDMILLLELLDLNHH   89 (91)
Q Consensus        63 ~i~~l~~~~~~~~~~~lv~e~~~~g~L   89 (91)
                      ++.........  ..+++|||++++++
T Consensus        80 ~i~~p~~~~~~--~~~lVmE~~~g~~~  104 (190)
T cd05145          80 GVPVPEPILLK--KNVLVMEFIGDDGS  104 (190)
T ss_pred             CCCCceEEEec--CCEEEEEEecCCCc
Confidence            66432222222  24899999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1345|consensus

Probab=99.17  E-value=2e-11  Score=66.35  Aligned_cols=87  Identities=14%  Similarity=0.217  Sum_probs=68.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeehe-eeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQ-VFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~~~lv   80 (91)
                      +.|.+.+.+|+|-||++..+.++.+..++++|..+.....   ...|.+|-.---.++.|.||+.-++ .|++.+...++
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt---~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT---QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh---HHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            4678889999999999999999999999999998764321   2346666544444666889998655 48888888999


Q ss_pred             EeccCCCCCCC
Q psy8005          81 LELLDLNHHQA   91 (91)
Q Consensus        81 ~e~~~~g~L~~   91 (91)
                      +||+|.|+|.+
T Consensus       101 qE~aP~gdL~s  111 (378)
T KOG1345|consen  101 QEFAPRGDLRS  111 (378)
T ss_pred             eccCccchhhh
Confidence            99999999863

>KOG1006|consensus

Probab=99.14  E-value=1.5e-11  Score=66.62  Aligned_cols=82  Identities=21%  Similarity=0.244  Sum_probs=67.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +.+-...||.|+||.|++..++.+|...|+|.+..... .....+++.+.+.....++.|||++.++..-..+..|+-||
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            44556789999999999999999999999999987654 23345688888877776668999999998777778999999


Q ss_pred             ccC
Q psy8005          83 LLD   85 (91)
Q Consensus        83 ~~~   85 (91)
                      +++
T Consensus       144 LMd  146 (361)
T KOG1006|consen  144 LMD  146 (361)
T ss_pred             HHh
Confidence            875

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.14  E-value=1e-09  Score=58.71  Aligned_cols=86  Identities=17%  Similarity=0.211  Sum_probs=63.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHH------HHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAE------ILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      .+|+..+.++.|+||.|+....  .+..+++|.+........ ..+.      +.+|+..+..+. |+++......+...
T Consensus        31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-~~GI~~~~d~~~~~  107 (232)
T PRK10359         31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-SEGLASLNDFYLLA  107 (232)
T ss_pred             CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-HCCCCcceEeeeec
Confidence            3688999999999999998654  366899999976543221 1112      467777888887 79998887664432


Q ss_pred             --------CeEEEEEeccCCCCCC
Q psy8005          75 --------HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 --------~~~~lv~e~~~~g~L~   90 (91)
                              ...+++|||++|.+|.
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~  131 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELN  131 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHH
Confidence                    3578999999998773

>KOG3653|consensus

Probab=99.11  E-value=5.5e-11  Score=68.29  Aligned_cols=82  Identities=12%  Similarity=0.116  Sum_probs=62.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcC-CCCCeeeeheeeeeCC----e
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVFESSH----D   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~~~~~~~----~   76 (91)
                      ...++.+.+|+|.||.||++...  ++.||||+++...     .+.+.+|-.++.... .|+||++..+.-....    .
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~-----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQE-----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc--CceeEEEecCHHH-----HHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence            34566789999999999999754  5889999986543     445777777666533 2899999887654433    7


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+||++|-+.|+|.
T Consensus       283 ywLVt~fh~kGsL~  296 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLC  296 (534)
T ss_pred             eeEEeeeccCCcHH
Confidence            89999999999985

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.07  E-value=1.6e-09  Score=57.47  Aligned_cols=75  Identities=28%  Similarity=0.483  Sum_probs=62.6

Q ss_pred             CeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          14 KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        14 ~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      +||.+|++....++..+++|.+........ ...+.+|+..++.++ |++++++.+.+......++++|++++++|.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~   75 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLK-HPNIVRLYDVFEDEDKLYLVMEYCDGGDLF   75 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCC-CCcHHHHHhheeeCCEEEEEEeCCCCCCHH
Confidence            478999999888889999999876543221 456888999999997 899999999998888999999999998764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1163|consensus

Probab=99.06  E-value=5e-10  Score=60.21  Aligned_cols=78  Identities=17%  Similarity=0.241  Sum_probs=62.0

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|.+++.||+|+||.+|.+.....|.+||+|.=.....    ...+.-|..+.+.+.+...++.+.........-.+|||
T Consensus        16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            68899999999999999999999999999998654432    22466788888888855667776666666677789999


Q ss_pred             cc
Q psy8005          83 LL   84 (91)
Q Consensus        83 ~~   84 (91)
                      ++
T Consensus        92 LL   93 (341)
T KOG1163|consen   92 LL   93 (341)
T ss_pred             cc
Confidence            87

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.03  E-value=1.3e-09  Score=64.12  Aligned_cols=89  Identities=9%  Similarity=0.047  Sum_probs=55.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEc----------------cCCcEEEEEEeccccCch--h----------HHHHHHHHHH
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR----------------KNGTQYAAKFLRKKRRST--D----------LKAEILHEVA   53 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~----------------~~~~~~~~k~~~~~~~~~--~----------~~~~~~~~~~   53 (91)
                      ++|.+.+.||+|+||.||++...                ..+..+++|.+.......  .          ..+....|+.
T Consensus       145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~  224 (507)
T PLN03224        145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY  224 (507)
T ss_pred             cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence            68999999999999999998642                234579999986432110  0          0111233555


Q ss_pred             HHHhcCCCC----Ceeeeheeee--------eCCeEEEEEeccCCCCCC
Q psy8005          54 VLEACRCNS----RIVQLHQVFE--------SSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        54 ~~~~~~~~~----~i~~l~~~~~--------~~~~~~lv~e~~~~g~L~   90 (91)
                      .+..+.+++    +++++.+++.        .....++|+||+++++|.
T Consensus       225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~  273 (507)
T PLN03224        225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLG  273 (507)
T ss_pred             HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHH
Confidence            556665322    2244444432        234689999999998874

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.03  E-value=4.3e-09  Score=55.46  Aligned_cols=80  Identities=15%  Similarity=0.162  Sum_probs=57.1

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh------HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD------LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.||+|++|.||++..  .+..+++|..........      ....+.+|+.++..+. ++++......+......+++|
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence            5789999999999976  566788887654322111      1234778888888887 577665544445566788999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||++|++|.
T Consensus        79 e~~~G~~L~   87 (211)
T PRK14879         79 EYIEGEPLK   87 (211)
T ss_pred             EEeCCcCHH
Confidence            999998874

>smart00090 RIO RIO-like kinase

Probab=99.03  E-value=3.6e-09  Score=57.00  Aligned_cols=85  Identities=16%  Similarity=0.085  Sum_probs=57.4

Q ss_pred             cceeeceecCcCeeEEEEEE-EccCCcEEEEEEeccccCch-------------------h---HHHHHHHHHHHHHhcC
Q psy8005           3 NTKITKSFPLGKYATVRRCR-DRKNGTQYAAKFLRKKRRST-------------------D---LKAEILHEVAVLEACR   59 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~-~~~~~~~~~~k~~~~~~~~~-------------------~---~~~~~~~~~~~~~~~~   59 (91)
                      .|.+.+.||+|++|.||++. +..++..+++|.+.......                   .   ....+..|...+..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            36678899999999999998 66778999999987542110                   0   1122567888888886


Q ss_pred             CCCCeeeeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          60 CNSRIVQLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        60 ~~~~i~~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      .  +.+.....+... ..+++|||+++++|.
T Consensus       109 ~--~~i~~p~~~~~~-~~~lV~E~~~g~~L~  136 (237)
T smart00090      109 E--AGVPVPKPIAWR-RNVLVMEFIGGDGLP  136 (237)
T ss_pred             h--cCCCCCeeeEec-CceEEEEEecCCccc
Confidence            2  223222333222 358999999998763

>KOG1167|consensus

Probab=99.02  E-value=2.6e-10  Score=64.52  Aligned_cols=82  Identities=17%  Similarity=0.312  Sum_probs=70.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc---CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ..|..++.||.|+|+.|+.+....   ....+|+|.+.....    +.....|++.+..+.++.|++++.+++..++...
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~  111 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA  111 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence            457788999999999999998766   567899999876543    4568889999999998999999999999999999


Q ss_pred             EEEeccCCC
Q psy8005          79 LLLELLDLN   87 (91)
Q Consensus        79 lv~e~~~~g   87 (91)
                      +|+||.+..
T Consensus       112 ivlp~~~H~  120 (418)
T KOG1167|consen  112 IVLPYFEHD  120 (418)
T ss_pred             EEecccCcc
Confidence            999998754

>KOG0614|consensus

Probab=99.02  E-value=7.7e-12  Score=72.70  Aligned_cols=89  Identities=21%  Similarity=0.325  Sum_probs=74.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++++.+..+|-|+||.|-..........+|+|++.+.+. .....+++..|-.+|.... .|.|++++..|.++.++||.
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmL  498 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYML  498 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhh
Confidence            466778899999999998887665555689999988764 3444566888889999888 69999999999999999999


Q ss_pred             EeccCCCCCCC
Q psy8005          81 LELLDLNHHQA   91 (91)
Q Consensus        81 ~e~~~~g~L~~   91 (91)
                      ||-|-||+|++
T Consensus       499 mEaClGGElWT  509 (732)
T KOG0614|consen  499 MEACLGGELWT  509 (732)
T ss_pred             HHhhcCchhhh
Confidence            99999999874

>KOG0596|consensus

Probab=99.00  E-value=9.2e-10  Score=64.65  Aligned_cols=81  Identities=17%  Similarity=0.168  Sum_probs=63.9

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|.+.+.||+|+-+.||++.....+. +++|.+............+.+|+.+|..+.+|.+|++++++-..++.+|||||
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~s~~~i-yalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLNSDKQI-YALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeecCCCcc-hhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            47788999999999999997654443 45554444333333455699999999999999999999999888999999999


Q ss_pred             cc
Q psy8005          83 LL   84 (91)
Q Consensus        83 ~~   84 (91)
                      +=
T Consensus       441 ~G  442 (677)
T KOG0596|consen  441 CG  442 (677)
T ss_pred             cc
Confidence            63

>KOG0603|consensus

Probab=98.98  E-value=2e-10  Score=67.70  Aligned_cols=83  Identities=22%  Similarity=0.390  Sum_probs=68.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+...+|.|+|+.|..|.+..++...++|++.+...      ....++.++....+|+|++++++.+.+....|+||
T Consensus       322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             hhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence            457777789999999999999999999999999987622      23345655555556999999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |.+.|+.+.
T Consensus       396 e~l~g~ell  404 (612)
T KOG0603|consen  396 ELLDGGELL  404 (612)
T ss_pred             hhccccHHH
Confidence            999998764

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.90  E-value=2.1e-08  Score=52.45  Aligned_cols=79  Identities=13%  Similarity=0.044  Sum_probs=52.5

Q ss_pred             eecCcCeeEEEEEEEccCCcEEEEEEeccccCch---h---HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           9 SFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST---D---LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .||+|++|.||++..  .+..+++|.........   .   ....+.+|..++..+. ++++....-........+++||
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e   77 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME   77 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence            379999999999974  45678888865432111   0   1234678888888887 4544332222334556789999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |++|++|.
T Consensus        78 ~~~g~~l~   85 (199)
T TIGR03724        78 YIEGKPLK   85 (199)
T ss_pred             EECCccHH
Confidence            99998874

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.88  E-value=9.1e-09  Score=61.44  Aligned_cols=82  Identities=9%  Similarity=0.024  Sum_probs=51.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC----CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeehee------e
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQV------F   71 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~------~   71 (91)
                      ++|.+.+.||+|+||.||++....+    +..+++|.+......    +....+  .+.... +.++..+...      .
T Consensus       132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~~e--~l~~~~-~~~~~~~~~~~~~~~~~  204 (566)
T PLN03225        132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWMNE--RVRRAC-PNSCADFVYGFLEPVSS  204 (566)
T ss_pred             CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh----HHHHHH--HHHhhc-hhhHHHHHHhhhccccc
Confidence            6889999999999999999999887    889999987543211    111111  111111 1111111111      1


Q ss_pred             eeCCeEEEEEeccCCCCCC
Q psy8005          72 ESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        72 ~~~~~~~lv~e~~~~g~L~   90 (91)
                      ......++++||+++++|.
T Consensus       205 ~~~~~~~LV~ey~~~gsL~  223 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLA  223 (566)
T ss_pred             ccCCceEEEEEecCCCcHH
Confidence            3456789999999998874

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.87  E-value=4.1e-08  Score=58.36  Aligned_cols=83  Identities=10%  Similarity=-0.017  Sum_probs=55.8

Q ss_pred             eeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-----h-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           5 KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-----T-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ...+.||+|+||.||++......  +++|........     . .....+.+|..++..+. |++++............+
T Consensus       336 ~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        336 IPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             CccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEeCCCCE
Confidence            44678999999999998764432  333322111110     1 11245788999999998 688776555555556678


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus       413 lv~E~~~g~~L~  424 (535)
T PRK09605        413 IVMEYIGGKDLK  424 (535)
T ss_pred             EEEEecCCCcHH
Confidence            999999999874

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.85  E-value=4.3e-08  Score=48.68  Aligned_cols=79  Identities=19%  Similarity=0.128  Sum_probs=60.0

Q ss_pred             eeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeeheeeeeCCeEEEEEecc
Q psy8005           6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLLELL   84 (91)
Q Consensus         6 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~~~~~lv~e~~   84 (91)
                      +.+.+++|.++.||++....  ..+++|.......    ...+..|...+..+.++ .+++++.......+..++++|++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence            35689999999999998744  6788998765432    34577788888888743 57778777776667899999999


Q ss_pred             CCCCCC
Q psy8005          85 DLNHHQ   90 (91)
Q Consensus        85 ~~g~L~   90 (91)
                      +++++.
T Consensus        76 ~g~~~~   81 (155)
T cd05120          76 EGETLD   81 (155)
T ss_pred             CCeecc
Confidence            987664

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.82  E-value=3.7e-08  Score=51.63  Aligned_cols=81  Identities=21%  Similarity=0.182  Sum_probs=54.0

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch--------------------hHHHHHHHHHHHHHhcCCCCC
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST--------------------DLKAEILHEVAVLEACRCNSR   63 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~   63 (91)
                      |.+.+.||+|++|.||++... ++..+++|.++......                    ........|...+..+. +++
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~   94 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG   94 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence            667889999999999999764 68899999876532100                    00112456677777775 343


Q ss_pred             --eeeeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          64 --IVQLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        64 --i~~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                        +++..+    ....+++|||+++++|.
T Consensus        95 i~v~~~~~----~~~~~lv~e~~~g~~L~  119 (198)
T cd05144          95 FPVPKPID----WNRHAVVMEYIDGVELY  119 (198)
T ss_pred             CCCCceee----cCCceEEEEEeCCcchh
Confidence              333322    24468999999998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.78  E-value=6.6e-09  Score=61.54  Aligned_cols=35  Identities=29%  Similarity=0.370  Sum_probs=29.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccc
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKK   38 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~   38 (91)
                      +|.. +++++|++|+|+++....+|..||+|++.+.
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            3454 7899999999999998777999999999754

>KOG0983|consensus

Probab=98.78  E-value=4.1e-09  Score=57.72  Aligned_cols=80  Identities=23%  Similarity=0.297  Sum_probs=62.6

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      .+.+.-+|+|+.|+|+++..+.++.-.|||.+.+...... ....+.-+.++..-.+.|.|++.+++|..+..+++-||.
T Consensus        94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee-~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel  172 (391)
T KOG0983|consen   94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEE-NKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL  172 (391)
T ss_pred             hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHH-HHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence            3456689999999999999999999999999987764332 344566666555544479999999999988888887776


Q ss_pred             c
Q psy8005          84 L   84 (91)
Q Consensus        84 ~   84 (91)
                      +
T Consensus       173 M  173 (391)
T KOG0983|consen  173 M  173 (391)
T ss_pred             H
Confidence            5

>KOG1165|consensus

Probab=98.75  E-value=1.3e-08  Score=57.07  Aligned_cols=78  Identities=18%  Similarity=0.202  Sum_probs=61.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|++++.||.|+||..+.+...-++..||+|.=+...-    ...+.-|-...+-+...++|+..+........-.||+|
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~----APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE----APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccCC----cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            68999999999999999999999999999997654322    12356677777777767888887766666666678998


Q ss_pred             cc
Q psy8005          83 LL   84 (91)
Q Consensus        83 ~~   84 (91)
                      ++
T Consensus       105 LL  106 (449)
T KOG1165|consen  105 LL  106 (449)
T ss_pred             hh
Confidence            76

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.75  E-value=1.7e-07  Score=49.81  Aligned_cols=81  Identities=10%  Similarity=-0.033  Sum_probs=57.3

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc--hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ..+...++++.||.|+....  .+.+++.+.+......  .-....+.+|+.+++.+.++++++++.+.    +..+++|
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm   77 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR   77 (218)
T ss_pred             cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence            34567899999999996644  4566666665443221  11122478899999999866888888764    3469999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||++|.+|.
T Consensus        78 eyI~G~~L~   86 (218)
T PRK12274         78 SYLAGAAMY   86 (218)
T ss_pred             eeecCccHH
Confidence            999988874

>KOG0671|consensus

Probab=98.74  E-value=1.8e-08  Score=56.92  Aligned_cols=81  Identities=23%  Similarity=0.384  Sum_probs=64.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-----CCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-----SRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~~l~~~~~~~~~   76 (91)
                      ..|.+.+.+|+|.||+|..|.+..++..+|+|++..-   ...++..+-|+.+++.+..+     --++.+.++|.-.+.
T Consensus        89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH  165 (415)
T ss_pred             cceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence            3577889999999999999999988899999998643   23356678899999998532     235677788888889


Q ss_pred             EEEEEeccC
Q psy8005          77 MILLLELLD   85 (91)
Q Consensus        77 ~~lv~e~~~   85 (91)
                      +++|+|.+.
T Consensus       166 iCivfellG  174 (415)
T KOG0671|consen  166 ICIVFELLG  174 (415)
T ss_pred             eEEEEeccC
Confidence            999999774

>KOG0669|consensus

Probab=98.66  E-value=9.9e-11  Score=63.24  Aligned_cols=82  Identities=15%  Similarity=0.303  Sum_probs=60.6

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--------CC
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--------SH   75 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--------~~   75 (91)
                      |.-...||+|.||.||++....++..+++|..--..-.........+++.++..+. |+|++.+.+.+.+        ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lk-Henv~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCcccccc
Confidence            44456899999999999988888888777654322112234556788999999998 8999888776542        23


Q ss_pred             eEEEEEeccCC
Q psy8005          76 DMILLLELLDL   86 (91)
Q Consensus        76 ~~~lv~e~~~~   86 (91)
                      .+|+|+++|+.
T Consensus        98 t~ylVf~~ceh  108 (376)
T KOG0669|consen   98 TFYLVFDFCEH  108 (376)
T ss_pred             eeeeeHHHhhh
Confidence            58999999875

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.63  E-value=9.7e-07  Score=48.81  Aligned_cols=83  Identities=16%  Similarity=0.078  Sum_probs=50.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC---CcEEEEEEeccccCch--hH-------HHHHHHHHHHHHhcCCCCCeeeehe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN---GTQYAAKFLRKKRRST--DL-------KAEILHEVAVLEACRCNSRIVQLHQ   69 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~i~~l~~   69 (91)
                      ..|++.+.||+|+||.||++....+   ...+++|.........  ..       ......+...+..+. |++++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-h~~i~~~~~   90 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNID-HLGIPKYYG   90 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCC-CCCCCcEEE
Confidence            3688999999999999999987665   4556666543221110  00       001122223344556 799999887


Q ss_pred             eeeeCC----eEEEEEeccC
Q psy8005          70 VFESSH----DMILLLELLD   85 (91)
Q Consensus        70 ~~~~~~----~~~lv~e~~~   85 (91)
                      +.....    ..++++|++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~  110 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLV  110 (294)
T ss_pred             eeeEecCCceEEEEEEehhc
Confidence            654432    3467777653

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.61  E-value=2e-06  Score=47.21  Aligned_cols=83  Identities=27%  Similarity=0.368  Sum_probs=66.6

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      |.+...+|.|.|+.|+.+.+.   ..+++|.+........ ....+.++...+..+.++++++++.+.+......+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            567788999999999999876   6678888876554332 455688899999999843379999998877777899999


Q ss_pred             ccCCCCC
Q psy8005          83 LLDLNHH   89 (91)
Q Consensus        83 ~~~~g~L   89 (91)
                      ++.++++
T Consensus        79 ~~~~~~l   85 (384)
T COG0515          79 YVDGGSL   85 (384)
T ss_pred             cCCCCcH
Confidence            9998876

>KOG1164|consensus

Probab=98.58  E-value=8.6e-07  Score=49.80  Aligned_cols=81  Identities=21%  Similarity=0.248  Sum_probs=58.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCC-cEEEEEEeccccCchhHHHHHHHHHHHHHhcC---CCCCeeeeheee-eeCCeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNG-TQYAAKFLRKKRRSTDLKAEILHEVAVLEACR---CNSRIVQLHQVF-ESSHDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~~~-~~~~~~   77 (91)
                      .|.+.+.||+|+||.||.+.+...+ ..+|+|.-........ . .+..|..++..+.   +.++++.+.+.. ....+-
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-S-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-c-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            5889999999999999999987764 5778887765422111 1 4666777777765   235777777777 467788


Q ss_pred             EEEEeccC
Q psy8005          78 ILLLELLD   85 (91)
Q Consensus        78 ~lv~e~~~   85 (91)
                      ++||+++.
T Consensus        97 ~iVM~l~G  104 (322)
T KOG1164|consen   97 FIVMSLLG  104 (322)
T ss_pred             EEEEeccC
Confidence            99998763

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.57  E-value=9.4e-07  Score=45.80  Aligned_cols=31  Identities=29%  Similarity=0.270  Sum_probs=26.4

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccc
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKK   38 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~   38 (91)
                      .+.||+|+||.||.+... .+..+++|.+...
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~   32 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTG   32 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecC
Confidence            467999999999999876 6889999988653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1027|consensus

Probab=98.54  E-value=1.4e-07  Score=57.90  Aligned_cols=72  Identities=18%  Similarity=0.170  Sum_probs=57.3

Q ss_pred             eceecCcCeeE-EEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           7 TKSFPLGKYAT-VRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         7 ~~~ig~g~~~~-v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      .+.+|.|+-|+ ||+|...  ++.||||.+-..     +..-..+|+.+++.-+.||||++++..-.+..+.|+..|+|.
T Consensus       514 ~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e-----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVYE--GREVAVKRLLEE-----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             HHHcccCCCCcEEEEEeeC--CceehHHHHhhH-----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            35677777665 8888764  568999877432     234578899999999889999999999888899999999985

>KOG0670|consensus

Probab=98.54  E-value=1.3e-07  Score=55.91  Aligned_cols=79  Identities=23%  Similarity=0.346  Sum_probs=64.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC-----CCCeeeeheeeeeCCeE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-----NSRIVQLHQVFESSHDM   77 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~~~~~~~~~~   77 (91)
                      .|.+....|+|-|++|.+|.+...+..||+|+|......   ...-+.|+++|+.|+.     --++++++..|.-.+.+
T Consensus       433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M---~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL  509 (752)
T KOG0670|consen  433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM---HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL  509 (752)
T ss_pred             eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH---hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence            577888999999999999999999999999999865322   3446678999998873     13678888888878899


Q ss_pred             EEEEecc
Q psy8005          78 ILLLELL   84 (91)
Q Consensus        78 ~lv~e~~   84 (91)
                      |||+|-+
T Consensus       510 ClVFE~L  516 (752)
T KOG0670|consen  510 CLVFEPL  516 (752)
T ss_pred             EEEehhh
Confidence            9999964

>KOG0984|consensus

Probab=98.48  E-value=2.6e-07  Score=49.04  Aligned_cols=80  Identities=19%  Similarity=0.252  Sum_probs=63.7

Q ss_pred             eeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEecc
Q psy8005           5 KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   84 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~   84 (91)
                      ..+..||+|++|.|-+-.+..+|.-.|+|.+..+.. ......+++++.+...-...|.++..++.+.....+|+.||.+
T Consensus        49 ~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M  127 (282)
T KOG0984|consen   49 VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM  127 (282)
T ss_pred             hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence            345689999999999988889999999999976654 2234457778876665555799999999888888899999987


Q ss_pred             C
Q psy8005          85 D   85 (91)
Q Consensus        85 ~   85 (91)
                      .
T Consensus       128 ~  128 (282)
T KOG0984|consen  128 D  128 (282)
T ss_pred             h
Confidence            4

>KOG1166|consensus

Probab=98.43  E-value=4.2e-07  Score=57.09  Aligned_cols=85  Identities=13%  Similarity=0.113  Sum_probs=58.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +.|.+.+.+|.|+||+||++.... +..+|+|.-.......- ....++.-+. .. +  -+.+.....++.-.+..+++
T Consensus       698 ~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~-~--~~~~~~~~~a~~~~~~S~lv  772 (974)
T KOG1166|consen  698 EKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLK-PQ-M--LPSIMHISSAHVFQNASVLV  772 (974)
T ss_pred             eeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhc-hh-h--hcchHHHHHHHccCCcceee
Confidence            457788999999999999998877 88999998766543321 1112222222 11 1  14556666666667778999


Q ss_pred             EeccCCCCCCC
Q psy8005          81 LELLDLNHHQA   91 (91)
Q Consensus        81 ~e~~~~g~L~~   91 (91)
                      +||.+.|+|.+
T Consensus       773 ~ey~~~Gtlld  783 (974)
T KOG1166|consen  773 SEYSPYGTLLD  783 (974)
T ss_pred             eeccccccHHH
Confidence            99999999864

>KOG0195|consensus

Probab=98.34  E-value=2e-08  Score=55.19  Aligned_cols=84  Identities=11%  Similarity=0.196  Sum_probs=62.5

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      ..+...|....-|..|++....  ..+++|++..+......+..|..|...++-.+ ||||+.+.+.+..++.+.++..|
T Consensus       192 lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifs-hpnilpvlgacnsppnlv~isq~  268 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQY  268 (448)
T ss_pred             hhhhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeec-CCchhhhhhhccCCCCceEeeee
Confidence            3445566777778888876643  34566666554433334456777888888888 89999999999999999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      ++.|+|+
T Consensus       269 mp~gsly  275 (448)
T KOG0195|consen  269 MPFGSLY  275 (448)
T ss_pred             ccchHHH
Confidence            9999886

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.30  E-value=9.6e-06  Score=47.55  Aligned_cols=31  Identities=32%  Similarity=0.403  Sum_probs=26.1

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccc
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKK   38 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~   38 (91)
                      .+++++|++|+||++.. .+|..||+|...+.
T Consensus       122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~  152 (437)
T TIGR01982       122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPG  152 (437)
T ss_pred             CcceeeeehhheEEEEe-cCCCEEEEEeeCCC
Confidence            36899999999999975 46889999998653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0664|consensus

Probab=98.29  E-value=4.4e-07  Score=50.13  Aligned_cols=79  Identities=16%  Similarity=0.364  Sum_probs=60.1

Q ss_pred             eeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----eEEE
Q psy8005           5 KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----DMIL   79 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----~~~l   79 (91)
                      +..+.||=|+||.||...+.+++++++.|.+..-...-.....+.+|+..+.-.. |.|++...++...+.     .+|+
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHHHH
Confidence            4467999999999999999999999999987653322334566888999888888 899999888876554     3455


Q ss_pred             EEecc
Q psy8005          80 LLELL   84 (91)
Q Consensus        80 v~e~~   84 (91)
                      +.|++
T Consensus       135 ~TELm  139 (449)
T KOG0664|consen  135 LTELM  139 (449)
T ss_pred             HHHHH
Confidence            55554

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.09  E-value=3.1e-05  Score=41.00  Aligned_cols=81  Identities=11%  Similarity=0.055  Sum_probs=54.3

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeeheeeeeC---CeEEEEEec
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESS---HDMILLLEL   83 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~---~~~~lv~e~   83 (91)
                      +.++.|..+.+|+..... +..+++|........ .....+..|..+++.+..+ .++++++......   +..+++||+
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            578899999999987643 578899987654321 1233577888888887631 3345555544332   256899999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      ++|.++.
T Consensus        82 i~G~~l~   88 (223)
T cd05154          82 VDGRVLR   88 (223)
T ss_pred             eCCEecC
Confidence            9988764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0665|consensus

Probab=98.02  E-value=1.8e-06  Score=48.32  Aligned_cols=82  Identities=21%  Similarity=0.274  Sum_probs=60.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------e
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------D   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------~   76 (91)
                      .|.-..+++.|.- .|..+.+...+..+++|.+..............+|..++..+. |+|++++...+....      .
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~l~~~~e   95 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVN-HKNIISLLNVFTPQKTLEEFQE   95 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhc-ccceeeeeeccCccccHHHHHh
Confidence            3455677888877 6777777777888998887655322223445788999999999 899999999886543      4


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .|+|||++..
T Consensus        96 ~y~v~e~m~~  105 (369)
T KOG0665|consen   96 VYLVMELMDA  105 (369)
T ss_pred             HHHHHHhhhh
Confidence            7889998753

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.01  E-value=7.3e-05  Score=38.11  Aligned_cols=77  Identities=9%  Similarity=-0.019  Sum_probs=49.3

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      .+.++.|..+.+|+....  +..+++|........   ......|...+..+.+...++++....  ...-+++||++++
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G   75 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTEL---LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG   75 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCccc---ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence            467889999999998754  678999987544211   123456667777665322233444332  2235799999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      .++.
T Consensus        76 ~~l~   79 (170)
T cd05151          76 SELL   79 (170)
T ss_pred             Cccc
Confidence            8764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0603|consensus

Probab=97.97  E-value=7.3e-07  Score=53.31  Aligned_cols=82  Identities=23%  Similarity=0.329  Sum_probs=63.1

Q ss_pred             ecCcCeeEEEEEE---EccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005          10 FPLGKYATVRRCR---DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus        10 ig~g~~~~v~~~~---~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      +|+|.||.|+.+.   ....+..+++|.+.+.............+..++...+.||.+++++..++++...++++++..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            6889999988553   3345667888888776544333335556677777777789999999999999999999999999


Q ss_pred             CCCCC
Q psy8005          87 NHHQA   91 (91)
Q Consensus        87 g~L~~   91 (91)
                      |.|+.
T Consensus        82 g~lft   86 (612)
T KOG0603|consen   82 GDLFT   86 (612)
T ss_pred             chhhh
Confidence            98863

>KOG0601|consensus

Probab=97.37  E-value=0.00022  Score=42.81  Aligned_cols=87  Identities=16%  Similarity=0.120  Sum_probs=62.7

Q ss_pred             cceeeceecCcCeeEEEEEEEc-cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDR-KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +|..+..||.+.|+.++.+... ..+..|++|.+.+..........-..++.+...+..|.+++.....+......|+-.
T Consensus       266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~  345 (524)
T KOG0601|consen  266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL  345 (524)
T ss_pred             CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence            5677889999999999987755 456788999886654332222223445555555555788888888887777888999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      |||+++++
T Consensus       346 e~~~~~s~  353 (524)
T KOG0601|consen  346 EFCEGGSS  353 (524)
T ss_pred             hhhcCcch
Confidence            99988765

>KOG0590|consensus

Probab=97.33  E-value=5.5e-05  Score=46.12  Aligned_cols=90  Identities=17%  Similarity=0.178  Sum_probs=64.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ..|.+.+.+|+|+++.+........ ...++.+.+...............+..+-..++.|.|++.+.+....+...++.
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            4678888999999999887765433 345666666544322223333445555556666589999999999989999999


Q ss_pred             EeccCCCCCCC
Q psy8005          81 LELLDLNHHQA   91 (91)
Q Consensus        81 ~e~~~~g~L~~   91 (91)
                      +++..++++++
T Consensus       100 ~~~s~g~~~f~  110 (601)
T KOG0590|consen  100 LSYSDGGSLFS  110 (601)
T ss_pred             cCccccccccc
Confidence            99999998864

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.27  E-value=0.0046  Score=33.77  Aligned_cols=78  Identities=9%  Similarity=0.029  Sum_probs=47.5

Q ss_pred             eec-CcCeeEEEEEEEccCCcEEEEEEeccccC-----c------hhHHHHHHHHHHHHHhcCCCCCe--eeeheeeee-
Q psy8005           9 SFP-LGKYATVRRCRDRKNGTQYAAKFLRKKRR-----S------TDLKAEILHEVAVLEACRCNSRI--VQLHQVFES-   73 (91)
Q Consensus         9 ~ig-~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~------~~~~~~~~~~~~~~~~~~~~~~i--~~l~~~~~~-   73 (91)
                      .+| .|+.|.+|.....  +..+++|.......     .      ......+.+|..++..+. ++++  +...+.... 
T Consensus        38 ~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         38 VVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARVVR  114 (239)
T ss_pred             eeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeeeee
Confidence            465 6777777777553  66788888754221     0      012234778999999987 4554  444443222 


Q ss_pred             CC---eEEEEEeccCC-CCC
Q psy8005          74 SH---DMILLLELLDL-NHH   89 (91)
Q Consensus        74 ~~---~~~lv~e~~~~-g~L   89 (91)
                      ..   ..++++|++++ .+|
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L  134 (239)
T PRK01723        115 HGLFYRADILIERIEGARDL  134 (239)
T ss_pred             cCcceeeeEEEEecCCCCCH
Confidence            22   23599999997 454

>PRK10593 hypothetical protein; Provisional

Probab=97.25  E-value=0.0072  Score=34.09  Aligned_cols=77  Identities=18%  Similarity=0.084  Sum_probs=50.0

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC--CCeeeeheeee---eCCeEEEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN--SRIVQLHQVFE---SSHDMILLL   81 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~l~~~~~---~~~~~~lv~   81 (91)
                      .+.|+.|..+.+|......  .++.+|.......    ...+..|...++.+...  ..++++++.+.   ..+..+++|
T Consensus        19 ~~~i~~G~~~~vy~~~~~~--~~~~~k~~~~~~~----~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         19 VECISEQPYAALWALYDSQ--GNPMPLMARSFST----PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             eeecCCccceeEEEEEcCC--CCEEEEEeccccc----chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            4688999999999875422  2456666432111    23577788888777632  24556665443   235689999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      |++++.++
T Consensus        93 E~i~G~~~  100 (297)
T PRK10593         93 ERLRGVSV  100 (297)
T ss_pred             eccCCEec
Confidence            99998776

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.24  E-value=0.0015  Score=34.37  Aligned_cols=74  Identities=18%  Similarity=0.188  Sum_probs=49.8

Q ss_pred             eeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeee-eheeeeeCCeEEEEEecc
Q psy8005           6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQ-LHQVFESSHDMILLLELL   84 (91)
Q Consensus         6 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-l~~~~~~~~~~~lv~e~~   84 (91)
                      ..+.|+.|..|.||.+...  +..+++|.-.....    +..+..|..++..+.. .++.+ ++.+    +..++.|||+
T Consensus        26 v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~----r~~l~kEakiLeil~g-~~~~p~vy~y----g~~~i~me~i   94 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSP----RRNLEKEAKILEILAG-EGVTPEVYFY----GEDFIRMEYI   94 (201)
T ss_pred             hhhhhhcccccEEEEeecc--CceEEEEEecCCcc----hhhHHHHHHHHHHhhh-cCCCceEEEe----chhhhhhhhh
Confidence            4568999999999999764  55788887654432    4457778888877763 34433 3322    2345569999


Q ss_pred             CCCCCC
Q psy8005          85 DLNHHQ   90 (91)
Q Consensus        85 ~~g~L~   90 (91)
                      +|.+|.
T Consensus        95 ~G~~L~  100 (201)
T COG2112          95 DGRPLG  100 (201)
T ss_pred             cCcchh
Confidence            987664

>KOG1243|consensus

Probab=97.21  E-value=0.0015  Score=40.36  Aligned_cols=62  Identities=13%  Similarity=0.192  Sum_probs=47.2

Q ss_pred             EEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005          21 CRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus        21 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +..+..+.++.+.......-  .-.+...+.+.-++.+. ||+|+++++.+...+.+|+|+|-+.
T Consensus        31 ~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvTErV~   92 (690)
T KOG1243|consen   31 GTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVTERVR   92 (690)
T ss_pred             cceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEeeccc
Confidence            45556677888887765432  11234667788889998 8999999999999999999999764

>PLN02876 acyl-CoA dehydrogenase

Probab=97.16  E-value=0.0088  Score=38.25  Aligned_cols=82  Identities=12%  Similarity=0.110  Sum_probs=50.9

Q ss_pred             eceecCcCeeEEEEEEEccCC--cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCC--eeeeheeeeeC---CeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNG--TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR--IVQLHQVFESS---HDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~l~~~~~~~---~~~~l   79 (91)
                      .+.++.|....+|.......+  ..+++|..+...... ....+.+|..+++.+..|++  +++.+..+.+.   +..|+
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~-~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ-SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc-cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence            456778888888876543322  356777665432211 13357788888888853343  35555554432   35789


Q ss_pred             EEeccCCCCC
Q psy8005          80 LLELLDLNHH   89 (91)
Q Consensus        80 v~e~~~~g~L   89 (91)
                      |||+++|..+
T Consensus       122 VME~v~G~~~  131 (822)
T PLN02876        122 IMEYLEGRIF  131 (822)
T ss_pred             EEEecCCccc
Confidence            9999998654

>KOG3741|consensus

Probab=97.12  E-value=0.0035  Score=38.17  Aligned_cols=68  Identities=16%  Similarity=0.249  Sum_probs=49.8

Q ss_pred             eEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCeEEEEEeccCC
Q psy8005          16 ATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMILLLELLDL   86 (91)
Q Consensus        16 ~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~~~lv~e~~~~   86 (91)
                      .+.|++....+|..|+.|.++-....  .+..-..-++.++.+. |+|++++.+.+.+    +..+.+|++|.|+
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~--~~nk~t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~  361 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQ--STNKDTSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPS  361 (655)
T ss_pred             ceeEeeeeccCCceeeeeeecccccc--CcccchHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCC
Confidence            35788888888999999998433221  1223344567788888 8999999988873    3468899999886

>KOG1024|consensus

Probab=96.74  E-value=0.00093  Score=39.23  Aligned_cols=84  Identities=12%  Similarity=0.134  Sum_probs=52.5

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCc-----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee-eCCeE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGT-----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-SSHDM   77 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~~   77 (91)
                      ++....+-+|.||.||.+..+....     .+.+|.+..... +-....++.|.-.+..+. |||+.++.+... +....
T Consensus       286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS-~iQv~~~L~es~lly~~s-H~nll~V~~V~ie~~~~P  363 (563)
T KOG1024|consen  286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHAS-QIQVNLLLQESMLLYGAS-HPNLLSVLGVSIEDYATP  363 (563)
T ss_pred             eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhccc-HHHHHHHHHHHHHHhcCc-CCCccceeEEEeeccCcc
Confidence            3445567799999999996653322     233443332211 112334777877888888 899999877643 44566


Q ss_pred             EEEEeccCCCCC
Q psy8005          78 ILLLELLDLNHH   89 (91)
Q Consensus        78 ~lv~e~~~~g~L   89 (91)
                      ++.+.+..-|.|
T Consensus       364 ~V~y~~~~~gNL  375 (563)
T KOG1024|consen  364 FVLYPATGVGNL  375 (563)
T ss_pred             eEEEeccCcchH
Confidence            777776665554

>KOG1235|consensus

Probab=96.71  E-value=0.015  Score=35.59  Aligned_cols=31  Identities=23%  Similarity=0.296  Sum_probs=26.2

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccc
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKK   38 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~   38 (91)
                      .++|+..+.++|+++..+. |..+|+|+.++.
T Consensus       166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPG  196 (538)
T ss_pred             cchhhhcchhheEEEEecC-CCEEEEEecCcC
Confidence            3688999999999997765 899999998764

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=96.69  E-value=0.018  Score=31.35  Aligned_cols=75  Identities=15%  Similarity=0.014  Sum_probs=46.1

Q ss_pred             eecCcCe-eEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCC
Q psy8005           9 SFPLGKY-ATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLN   87 (91)
Q Consensus         9 ~ig~g~~-~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g   87 (91)
                      .|..|.. +.||+....  +..+.+|......     .....+|..+++.+..+-.+++++......+..+++||+++|.
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~   77 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV   77 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence            3444444 567877543  3567788775432     1235567777777654434455665555555678999999987


Q ss_pred             CCC
Q psy8005          88 HHQ   90 (91)
Q Consensus        88 ~L~   90 (91)
                      ++.
T Consensus        78 ~l~   80 (244)
T cd05150          78 PAA   80 (244)
T ss_pred             cHh
Confidence            653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.57  E-value=0.026  Score=30.05  Aligned_cols=77  Identities=21%  Similarity=0.177  Sum_probs=48.7

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeeheee---eeCCeEEEEEe
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVF---ESSHDMILLLE   82 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~---~~~~~~~lv~e   82 (91)
                      ++.++.|..+.+|......  ..+++|.....    .....+..|..+++.+..+ ..+++++...   ......+++|+
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~   75 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME   75 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence            4678889999999987654  48888986543    1234566777777766532 2244444422   23345789999


Q ss_pred             ccCCCCC
Q psy8005          83 LLDLNHH   89 (91)
Q Consensus        83 ~~~~g~L   89 (91)
                      ++++.++
T Consensus        76 ~i~g~~~   82 (239)
T PF01636_consen   76 YIPGRPL   82 (239)
T ss_dssp             EESSEEH
T ss_pred             Eeccccc
Confidence            9987643

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.50  E-value=0.035  Score=30.15  Aligned_cols=73  Identities=12%  Similarity=0.031  Sum_probs=48.4

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      ..|++|.-+.+|+.    .+..+++|.......    .....+|..+++.+... -.+++.+.....++...++||+++|
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~----~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFD----KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCCC----HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            57899999999974    244567787754331    23456777777776521 2345556665566677899999998


Q ss_pred             CC
Q psy8005          87 NH   88 (91)
Q Consensus        87 g~   88 (91)
                      .+
T Consensus        79 ~~   80 (226)
T TIGR02172        79 KR   80 (226)
T ss_pred             cc
Confidence            63

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=96.48  E-value=0.042  Score=29.39  Aligned_cols=78  Identities=12%  Similarity=0.144  Sum_probs=47.8

Q ss_pred             eceecCcCeeEEEEEEEcc------CCcEEEEEEeccccCc----------h----------h----HHHHHHHHHHHHH
Q psy8005           7 TKSFPLGKYATVRRCRDRK------NGTQYAAKFLRKKRRS----------T----------D----LKAEILHEVAVLE   56 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~------~~~~~~~k~~~~~~~~----------~----------~----~~~~~~~~~~~~~   56 (91)
                      ...||+|.=+.||.+....      .+..+|+|........          +          .    ......+|...|.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3578999999999997653      2468899988642110          0          0    0111336777777


Q ss_pred             hcCCC-CCeeeeheeeeeCCeEEEEEeccCCCC
Q psy8005          57 ACRCN-SRIVQLHQVFESSHDMILLLELLDLNH   88 (91)
Q Consensus        57 ~~~~~-~~i~~l~~~~~~~~~~~lv~e~~~~g~   88 (91)
                      .+... -+++.....    ..-+++|||+.++.
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~  110 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQ  110 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCC
Confidence            76531 344444432    44689999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.42  E-value=0.061  Score=31.89  Aligned_cols=80  Identities=14%  Similarity=0.053  Sum_probs=49.7

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccC---c--hhHHHHHHHHHHHHHhcCCC--CCeeeeheeeeeCCeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR---S--TDLKAEILHEVAVLEACRCN--SRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~--~~i~~l~~~~~~~~~~~l   79 (91)
                      .+.+|.|.+..||+......+..+++|.-.....   .  +........|.+.+..+...  ..+++++..  +....++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            4578999999999998754335789998542211   0  11234456677777665421  345555443  2344689


Q ss_pred             EEeccCCCC
Q psy8005          80 LLELLDLNH   88 (91)
Q Consensus        80 v~e~~~~g~   88 (91)
                      +||++++..
T Consensus       109 VME~L~~~~  117 (401)
T PRK09550        109 VMEDLSDHK  117 (401)
T ss_pred             EEecCCCcc
Confidence            999998754

>KOG1033|consensus

Probab=96.41  E-value=0.00044  Score=41.29  Aligned_cols=70  Identities=17%  Similarity=0.312  Sum_probs=53.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~   73 (91)
                      +++.....+|.|+||.|+.+.....+..++||.|...... ..+....++...+..+. |+++++++..|..
T Consensus        49 ~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e-~s~~rvl~~~~s~a~fe-h~g~~~~~ha~~~  118 (516)
T KOG1033|consen   49 NDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNRE-ESRSRVLREVSSLAEFE-HPGIKRYFHAWYE  118 (516)
T ss_pred             ccccccccccccCccccCCccccccchhhHHHHhcccchh-hhhhhhhccccchhhhc-ccchhhheeceec
Confidence            3566788999999999999988877778999998765432 23445677777778887 8999998766643

>KOG0590|consensus

Probab=96.31  E-value=0.00054  Score=42.04  Aligned_cols=83  Identities=13%  Similarity=0.218  Sum_probs=49.7

Q ss_pred             eeceecCcCeeEEEEEEEccCCcEEEEEEec----cccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLR----KKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         6 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ....+|.|++|.++...........+.+...    ...........+..|..+-..+. |+|++.............-.|
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhcccchhhh
Confidence            4567889999977766655444433333322    11111111222555555666677 899988777666655555559


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |||++ +|+
T Consensus       401 E~~~~-Dlf  408 (601)
T KOG0590|consen  401 EYCPY-DLF  408 (601)
T ss_pred             hcccH-HHH
Confidence            99998 775

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.26  E-value=0.035  Score=33.93  Aligned_cols=30  Identities=23%  Similarity=0.262  Sum_probs=25.9

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccc
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKK   38 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~   38 (91)
                      ++++.++.|+|+++.... |..||||+..+.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPg  160 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPG  160 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCC
Confidence            688999999999998754 899999999763

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=95.77  E-value=0.0062  Score=29.78  Aligned_cols=31  Identities=26%  Similarity=0.341  Sum_probs=25.9

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccc
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKK   38 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~   38 (91)
                      ..++++++.|+|+++.... |..+++|...+.
T Consensus        16 ~~PlasASiaQVh~a~l~~-g~~VaVKV~rP~   46 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLKD-GEEVAVKVQRPG   46 (119)
T ss_pred             cchhhheehhhheeeeecc-cchhhhhhcchH
Confidence            4689999999999997644 889999998654

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.44  E-value=0.22  Score=28.30  Aligned_cols=74  Identities=22%  Similarity=0.227  Sum_probs=40.5

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC--CCCeeeeheeeeeCCeEEEEEecc
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC--NSRIVQLHQVFESSHDMILLLELL   84 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~l~~~~~~~~~~~lv~e~~   84 (91)
                      .+.++-|....+|...  ..+..+-+|.-....     ...+..|..-++.+..  ...+++........+..++++||+
T Consensus        22 ~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~-----~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   22 IEPVSGGDINEAYRLD--TDGGSYFVKVNSESG-----RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             EEEE--SSSSEEEEEE--TTS-EEEEEEEEGGG-----CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             eEecCCCChhheEEEE--CCCccEEEEecChhh-----HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence            4577888888888765  456678888876322     1235556665666531  244566666666666679999998


Q ss_pred             CCC
Q psy8005          85 DLN   87 (91)
Q Consensus        85 ~~g   87 (91)
                      +.+
T Consensus        95 ~~~   97 (288)
T PF03881_consen   95 EMG   97 (288)
T ss_dssp             ---
T ss_pred             cCC
Confidence            766

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=95.25  E-value=0.05  Score=30.83  Aligned_cols=36  Identities=17%  Similarity=0.217  Sum_probs=31.2

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEecccc
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKR   39 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~   39 (91)
                      +...+.||.|+++.|+.+.+..++..+++|......
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~   49 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA   49 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEeccc
Confidence            345789999999999999999999999999886544

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.10  E-value=0.31  Score=27.85  Aligned_cols=82  Identities=20%  Similarity=0.173  Sum_probs=52.4

Q ss_pred             eeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-----------------h---hHHHHHHHHHHHHHhcCCCCCe
Q psy8005           5 KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-----------------T---DLKAEILHEVAVLEACRCNSRI   64 (91)
Q Consensus         5 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------------~---~~~~~~~~~~~~~~~~~~~~~i   64 (91)
                      .++..||-|.=+.||.+.+. .+.++++|.=......                 .   -.+....+|.++|..+..  .-
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~--~G  170 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYP--EG  170 (304)
T ss_pred             hhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhh--cC
Confidence            45689999999999999875 4677888864321100                 0   022335677888888863  22


Q ss_pred             eeeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          65 VQLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        65 ~~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      .+++..+ +.+...++||+++|-+|.
T Consensus       171 ~~VP~P~-~~nRHaVvMe~ieG~eL~  195 (304)
T COG0478         171 VKVPKPI-AWNRHAVVMEYIEGVELY  195 (304)
T ss_pred             CCCCCcc-ccccceeeeehcccceee
Confidence            2222222 235578999999987764

>KOG0601|consensus

Probab=94.69  E-value=0.021  Score=34.77  Aligned_cols=82  Identities=16%  Similarity=0.079  Sum_probs=55.0

Q ss_pred             ceeeceecC--cCeeEEEEEEE--ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           4 TKITKSFPL--GKYATVRRCRD--RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         4 ~~~~~~ig~--g~~~~v~~~~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +.....+|.  |.+|.+|.+.-  ...+..+++|..............-.++..-...+..|++.++.+..+...+..++
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi  195 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI  195 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence            345677888  99999997765  56667778776433221111122233445555556668899998888888899999


Q ss_pred             EEeccC
Q psy8005          80 LLELLD   85 (91)
Q Consensus        80 v~e~~~   85 (91)
                      -.|++.
T Consensus       196 qtE~~~  201 (524)
T KOG0601|consen  196 QTELCG  201 (524)
T ss_pred             eecccc
Confidence            999875

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.15  E-value=0.48  Score=26.62  Aligned_cols=69  Identities=16%  Similarity=0.157  Sum_probs=40.0

Q ss_pred             EEEEEEEccCC-cEEEEEEeccccCchhHHHHHHHHHHHHHhcCC--CCCeeeeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          17 TVRRCRDRKNG-TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC--NSRIVQLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        17 ~v~~~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      .|..+....++ .++-+|+-....     ...+..|+.-+..+..  -..+.+......+....|+|+||++-+++.
T Consensus        28 ~inea~~v~dg~~~~FvK~n~~~~-----~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          28 DINEAWRLRDGTDPFFVKCNQREQ-----LSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             cccceeEeecCCcceEEEecchhh-----HHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            33344333343 356677654321     2345556554444431  245566666666778899999999987764

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.81  E-value=0.56  Score=25.38  Aligned_cols=76  Identities=13%  Similarity=0.107  Sum_probs=42.5

Q ss_pred             eceecCcCeeEEEEEEEcc-CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           7 TKSFPLGKYATVRRCRDRK-NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      .+.+..|-...+|+..... .+..+.+|........   .....+|..++..+..+.-.++++...  .  -.+++||++
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~---~~d~~~E~~~~~~l~~~gl~P~v~~~~--~--~~~l~e~i~   75 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL---IIDRERELRIHKLLSKHGLAPKLYATF--Q--NGLIYEFIP   75 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc---eecHHHHHHHHHHHHhCCCCCeEEEEe--C--CcEEEEeeC
Confidence            3466677777888876432 2457888876543211   012235666666665322233443322  1  247999999


Q ss_pred             CCCC
Q psy8005          86 LNHH   89 (91)
Q Consensus        86 ~g~L   89 (91)
                      |.++
T Consensus        76 G~~l   79 (235)
T cd05157          76 GRTL   79 (235)
T ss_pred             CCcC
Confidence            8765

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=93.57  E-value=0.64  Score=25.31  Aligned_cols=74  Identities=9%  Similarity=-0.015  Sum_probs=42.1

Q ss_pred             ceecCcCeeE-EEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC--CCeeeeheeeeeC---CeEEEEE
Q psy8005           8 KSFPLGKYAT-VRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN--SRIVQLHQVFESS---HDMILLL   81 (91)
Q Consensus         8 ~~ig~g~~~~-v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~l~~~~~~~---~~~~lv~   81 (91)
                      +.++.|+... ||+.     +..+++|......    ....+.+|..++..+..+  -.+++........   ...+++|
T Consensus         3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~~----~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~   73 (235)
T cd05155           3 EPVDSGGTDNATFRL-----GDDMSVRLPSAAG----YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVY   73 (235)
T ss_pred             eeccCCCcccceEEc-----CCceEEEcCCccc----hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEE
Confidence            4667666664 7764     2346677654321    133577888888777532  1223333222221   2348899


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ++++|.++.
T Consensus        74 ~~i~G~~l~   82 (235)
T cd05155          74 RWLEGETAT   82 (235)
T ss_pred             EeecCCCCC
Confidence            999998764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG3087|consensus

Probab=92.96  E-value=0.83  Score=24.87  Aligned_cols=77  Identities=21%  Similarity=0.188  Sum_probs=44.3

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-h----h-HHHHHHHHHHHHHhcCC-CCCeeeeheeeeeCCeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-T----D-LKAEILHEVAVLEACRC-NSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~----~-~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~~~l   79 (91)
                      ...+.+|+-+.|+++..  .|+.+.+|.=...... +    . ......+|..++..+.. --.++.++  +.+...-.+
T Consensus        12 l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~--~~D~~~~~i   87 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLI--FIDTYGGQI   87 (229)
T ss_pred             ceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEE--EEecCCCeE
Confidence            45777888888888765  3666677765432211 1    1 23346777777766441 01222332  334455678


Q ss_pred             EEeccCCC
Q psy8005          80 LLELLDLN   87 (91)
Q Consensus        80 v~e~~~~g   87 (91)
                      +|||+++.
T Consensus        88 ~ME~~~g~   95 (229)
T KOG3087|consen   88 YMEFIDGA   95 (229)
T ss_pred             EEEeccch
Confidence            89999873

>KOG1023|consensus

Probab=92.58  E-value=0.06  Score=32.71  Aligned_cols=34  Identities=9%  Similarity=0.079  Sum_probs=29.9

Q ss_pred             hcCCCCCeeeeheeeeeCCeEEEEEeccCCCCCCC
Q psy8005          57 ACRCNSRIVQLHQVFESSHDMILLLELLDLNHHQA   91 (91)
Q Consensus        57 ~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~L~~   91 (91)
                      .+. |.|+.++.+....++..+++.+||..|+|++
T Consensus         3 ~l~-h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D   36 (484)
T KOG1023|consen    3 QLD-HDNLNKFIGASVDGPEMIVIWEYCSRGSLLD   36 (484)
T ss_pred             ccc-hhhhhhheeeEecCCceEEEEeeecCccHHh
Confidence            455 7999999999888889999999999999864

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=91.72  E-value=1.1  Score=26.67  Aligned_cols=77  Identities=12%  Similarity=-0.006  Sum_probs=44.8

Q ss_pred             eecCcCeeEEEEEEEccCCcEEEEEEeccccC--c---hhHHHHHHHHHHHHHhcCCC-C-CeeeeheeeeeCCeEEEEE
Q psy8005           9 SFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR--S---TDLKAEILHEVAVLEACRCN-S-RIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~-~-~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.|...-||++.....+..+++|+-.....  .   +....+...|...++..... | .+++++.  .++....++|
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence            57889999999998753335788887653211  1   11223445666667665421 2 2333332  2334456899


Q ss_pred             eccCCC
Q psy8005          82 ELLDLN   87 (91)
Q Consensus        82 e~~~~g   87 (91)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            998654

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=90.46  E-value=1.9  Score=23.84  Aligned_cols=73  Identities=15%  Similarity=0.056  Sum_probs=39.4

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCCC
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHH   89 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~L   89 (91)
                      +..|-.+.+|+..  ..+..+++|.........  .....+|..+++.+..+.-.+++....  .  -++++||++|.++
T Consensus         4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~   75 (256)
T TIGR02721         4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKAL--GVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVI   75 (256)
T ss_pred             CCCcCcCCeEEEE--eCCccEEEeeCCcccccc--cCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCccc
Confidence            4456666778765  345678888754332111  012355666777665321122222221  2  3689999998765


Q ss_pred             C
Q psy8005          90 Q   90 (91)
Q Consensus        90 ~   90 (91)
                      .
T Consensus        76 ~   76 (256)
T TIGR02721        76 T   76 (256)
T ss_pred             c
Confidence            3

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PLN02756 S-methyl-5-thioribose kinase

Probab=90.40  E-value=2.7  Score=25.55  Aligned_cols=76  Identities=12%  Similarity=0.038  Sum_probs=44.5

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccC--ch---hHHHHHHHHHHHHHhcCC--CCCeeeeheeeeeCCeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR--ST---DLKAEILHEVAVLEACRC--NSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~---~~~~~~~~~~~~~~~~~~--~~~i~~l~~~~~~~~~~~l   79 (91)
                      .+.+|.|....||+..+.  +..+++|+-.....  ..   ........|...|+.+..  ...+++++....  +...+
T Consensus        37 ~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vl  112 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALI  112 (418)
T ss_pred             EEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEE
Confidence            567889999999998763  34688888763221  00   112233344555555432  135555555443  44678


Q ss_pred             EEeccCC
Q psy8005          80 LLELLDL   86 (91)
Q Consensus        80 v~e~~~~   86 (91)
                      +||++++
T Consensus       113 vME~L~~  119 (418)
T PLN02756        113 GMRYLEP  119 (418)
T ss_pred             EEeecCC
Confidence            8999977

>KOG1240|consensus

Probab=89.81  E-value=0.048  Score=36.48  Aligned_cols=78  Identities=13%  Similarity=0.241  Sum_probs=48.9

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh--HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD--LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++...+.+|++.|=++.++.+..  ..+++|+.-+....-+  ...+.+.++. ..-.. +||++++-....+....|||
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e--G~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~-~pn~lPfqk~~~t~kAAylv   99 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE--GLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMK-APNCLPFQKVLVTDKAAYLV   99 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC--ceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhc-CCcccchHHHHHhhHHHHHH
Confidence            46677899999999999987643  3488888866542211  1222333444 23333 79998876665555556666


Q ss_pred             Eecc
Q psy8005          81 LELL   84 (91)
Q Consensus        81 ~e~~   84 (91)
                      .+|.
T Consensus       100 Rqyv  103 (1431)
T KOG1240|consen  100 RQYV  103 (1431)
T ss_pred             HHHH
Confidence            6554

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=87.65  E-value=3.1  Score=22.65  Aligned_cols=77  Identities=14%  Similarity=0.097  Sum_probs=42.9

Q ss_pred             eecCcCeeEEEEEEEccCCcEEEEEEeccccCc-----hhH-HHHHHHHHHHHHhcCCC-CCeeeeheeeeeCCeEEEEE
Q psy8005           9 SFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-----TDL-KAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         9 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+.+|+=+.++.....  +..+++|.=.+....     ... .....+|..++..+... -+.+.+++  .+++...++|
T Consensus         3 ~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~d--vD~~~~~I~m   78 (204)
T COG3642           3 LIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYD--VDPDNGLIVM   78 (204)
T ss_pred             hhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEE--EcCCCCEEEE
Confidence            5678888888877442  334555543332221     111 23467788877776521 12222332  2455568999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      ||++|-.|
T Consensus        79 e~I~G~~l   86 (204)
T COG3642          79 EYIEGELL   86 (204)
T ss_pred             EEeCChhH
Confidence            99988654

>PRK12396 5-methylribose kinase; Reviewed

Probab=87.41  E-value=1.8  Score=26.18  Aligned_cols=79  Identities=18%  Similarity=0.030  Sum_probs=47.2

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEecccc-Cc---hhHHHHHHHHHHHHHhcCC-CC-CeeeeheeeeeCCeEEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKR-RS---TDLKAEILHEVAVLEACRC-NS-RIVQLHQVFESSHDMILL   80 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~---~~~~~~~~~~~~~~~~~~~-~~-~i~~l~~~~~~~~~~~lv   80 (91)
                      .+.||.|...-||++.+...+..+++|+-.... ..   +-...+...|...|+.... .| .+++++..  ++....++
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            568899999999999874334568888764321 11   1123445667777776542 13 33344322  33445688


Q ss_pred             EeccCCC
Q psy8005          81 LELLDLN   87 (91)
Q Consensus        81 ~e~~~~g   87 (91)
                      ||+++..
T Consensus       112 MEdL~~~  118 (409)
T PRK12396        112 MEDLSDH  118 (409)
T ss_pred             HHhCccc
Confidence            9988653

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=87.38  E-value=3.2  Score=22.47  Aligned_cols=76  Identities=14%  Similarity=0.142  Sum_probs=48.5

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccC--------------chhHHHHHHHHHHHHHhcC-----CCCCeeee
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR--------------STDLKAEILHEVAVLEACR-----CNSRIVQL   67 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------------~~~~~~~~~~~~~~~~~~~-----~~~~i~~l   67 (91)
                      ...|++|+.-.||.-.   .....++|++.....              .........+|+.-...+.     .+..+.++
T Consensus         6 ~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            4678888887777543   334457787766540              0011233455555443333     25788899


Q ss_pred             heeeeeCCeEEEEEeccC
Q psy8005          68 HQVFESSHDMILLLELLD   85 (91)
Q Consensus        68 ~~~~~~~~~~~lv~e~~~   85 (91)
                      ++..+++...-+++|.+.
T Consensus        83 ~G~veT~~G~Glv~e~I~  100 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIR  100 (199)
T ss_pred             eEEEecCCceEEEEEEEE
Confidence            999999998999999864

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=85.29  E-value=4.9  Score=22.67  Aligned_cols=77  Identities=16%  Similarity=0.082  Sum_probs=42.8

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeehee------eeeCCeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQV------FESSHDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~------~~~~~~~~l   79 (91)
                      .+.+..|.-..+|.....  +..+++|......     ......|..++..+..+ -.+++....      ....+..++
T Consensus        19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~   91 (296)
T cd05153          19 FEGISAGIENTNYFVTTD--SGRYVLTLFEKVS-----AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAA   91 (296)
T ss_pred             eecccCccccceEEEEeC--CCcEEEEEcCCCC-----hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEE
Confidence            446666766778876542  3467888775411     22344555555555421 123332221      123456789


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++++++|.++.
T Consensus        92 l~~~i~G~~~~  102 (296)
T cd05153          92 LVEFLAGEHLT  102 (296)
T ss_pred             EEEeCCCCCCC
Confidence            99999987753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=83.89  E-value=4.5  Score=22.18  Aligned_cols=68  Identities=15%  Similarity=0.143  Sum_probs=43.0

Q ss_pred             CcceeeceecCcCe-eEEEEEEEccCCcEEEEEEecc---ccC-------ch---------hHHHHHHHHHHHHHhcCC-
Q psy8005           2 VNTKITKSFPLGKY-ATVRRCRDRKNGTQYAAKFLRK---KRR-------ST---------DLKAEILHEVAVLEACRC-   60 (91)
Q Consensus         2 ~~~~~~~~ig~g~~-~~v~~~~~~~~~~~~~~k~~~~---~~~-------~~---------~~~~~~~~~~~~~~~~~~-   60 (91)
                      ++++.++.+|.|.- |.|++..-  .|..+|+|....   ...       ..         ....-+..|+.+..++.. 
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            35678899999999 99999865  466899999221   100       00         111236778887777663 


Q ss_pred             -CCC--eeeeheee
Q psy8005          61 -NSR--IVQLHQVF   71 (91)
Q Consensus        61 -~~~--i~~l~~~~   71 (91)
                       +.+  .++.+++.
T Consensus       115 ~~e~~~Avkc~Gyl  128 (207)
T PF13095_consen  115 GREGLWAVKCHGYL  128 (207)
T ss_pred             cccCceEEEeeEEE
Confidence             223  37777665

>KOG0576|consensus

Probab=82.40  E-value=0.65  Score=29.86  Aligned_cols=40  Identities=8%  Similarity=0.220  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHhcCCCCC-eeeeheeeeeCCeEEEEEeccCCC
Q psy8005          47 EILHEVAVLEACRCNSR-IVQLHQVFESSHDMILLLELLDLN   87 (91)
Q Consensus        47 ~~~~~~~~~~~~~~~~~-i~~l~~~~~~~~~~~lv~e~~~~g   87 (91)
                      ...-+++++...+ ||| .+..++.+...+..++.++++.++
T Consensus       279 ~~rl~~eLLdK~n-~P~~~v~~~~d~~~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  279 SRRLAIELLDKVN-NPNPVVRYLEDYDGEDYLWIPMRICSTG  319 (829)
T ss_pred             hhHHHHHHHHHcc-CCCCcccccccCCcccccchhhhhhcCC
Confidence            3455788899998 799 666677777777889999998776

>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain

Probab=81.87  E-value=0.85  Score=25.34  Aligned_cols=16  Identities=13%  Similarity=0.090  Sum_probs=13.6

Q ss_pred             eEEEEEeccCCCCCCC
Q psy8005          76 DMILLLELLDLNHHQA   91 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~~   91 (91)
                      ..+++|||++|++|++
T Consensus        91 ~~flimeYv~G~~l~~  106 (238)
T cd05124          91 AYLLIMEYVPGITLFK  106 (238)
T ss_pred             hheeeeeecCCccchh
Confidence            4789999999999863

The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=81.71  E-value=7.7  Score=22.19  Aligned_cols=77  Identities=12%  Similarity=0.017  Sum_probs=41.6

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeehee------eeeCCeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQV------FESSHDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~------~~~~~~~~l   79 (91)
                      ++.++.|.-..+|.....  +..+++|.......    ......+..++..+..+ -++++....      ....+..++
T Consensus        27 i~~~~~G~~n~~y~v~t~--~~~~vLK~~~~~~~----~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~  100 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTD--VGRYILTLYEKRVK----AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPAC  100 (307)
T ss_pred             ccccCCccccceEEEEeC--CCcEEEEEecCCCC----HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEE
Confidence            455666766778877542  33577887654211    22334455555555321 123333221      122456789


Q ss_pred             EEeccCCCCC
Q psy8005          80 LLELLDLNHH   89 (91)
Q Consensus        80 v~e~~~~g~L   89 (91)
                      ++++++|.++
T Consensus       101 l~e~i~G~~~  110 (307)
T TIGR00938       101 LVEFLQGLSV  110 (307)
T ss_pred             EEEeCCCCCC
Confidence            9999998764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	91
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-16
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		7e-09
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		9e-09
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-08
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-08
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		1e-08
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-08
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-08
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		1e-08
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-08
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-08
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-08
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-08
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-08
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-08
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		4e-08
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		4e-08
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		4e-08
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		1e-06
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-06
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-06
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-06
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-06
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-06

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/72 (47%), Positives = 52/72 (72%)
Query: 7   TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQ 66
           +K    GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +   R++ 
Sbjct: 34  SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 67  LHQVFESSHDMI 78
           LH+V+E++ ++I
Sbjct: 94  LHEVYENTSEII 105

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          GK+A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A VR+CR +  G +YAAKF++K+R S+  +     EI  EV +L   R +  I+ LH
Sbjct: 23 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 81
Query: 69 QVFESSHDMI 78
           +FE+  D++
Sbjct: 82 DIFENKTDVV 91

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A VR+CR +  G +YAAKF++K+R S+  +     EI  EV +L   R +  I+ LH
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 74
Query: 69 QVFESSHDMI 78
           +FE+  D++
Sbjct: 75 DIFENKTDVV 84

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 79
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 80 EVYENKTDVI 89

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 79
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 80 EVYENKTDVI 89

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
           G++A VR+CR +  G +YAAKF++K+R    R    + EI  EV +L   R +  I+ LH
Sbjct: 37  GQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR-HPNIITLH 95
Query: 69  QVFESSHDMI 78
            +FE+  D++
Sbjct: 96  DIFENKTDVV 105

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 68
          G +A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 69 QVFESSHDMI 78
          +V+E+  D+I
Sbjct: 81 EVYENKTDVI 90

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G +YAAKF++K++    R    + EI  EV++L     +  ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
           V+E+  D++
Sbjct: 82 DVYENRTDVV 91

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G +YAAKF++K++    R    + EI  EV++L     +  I+ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLH 81
Query: 69 QVFESSHDMI 78
           V+E+  D++
Sbjct: 82 DVYENRTDVV 91

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G +YAAKF++K++    R    + EI  EV++L     +  ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
           V+E+  D++
Sbjct: 82 DVYENRTDVV 91

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G +YAAKF++K++    R    + EI  EV++L     +  ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
           V+E+  D++
Sbjct: 82 DVYENRTDVV 91

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G +YAAKF++K++    R    + EI  EV++L     +  ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
           V+E+  D++
Sbjct: 82 DVYENRTDVV 91

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G +YAAKF++K++    R    + EI  EV++L     +  ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLH 81
Query: 69 QVFESSHDMI 78
           V+E+  D++
Sbjct: 82 DVYENRTDVV 91

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	91
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-23
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-19
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-18
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	6e-18
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-17
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-17
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-17
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	8e-17
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-16
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-12
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-12
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-12
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-12
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-12
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-11
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-11
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-11
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-10
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	5e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	7e-10
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-08
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-08
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-07
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-07
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-07
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-07
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	9e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	9e-06
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-05
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-05
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-05
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	5e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	8e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	9e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-04
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-04
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-04

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 88.9 bits (221), Expect = 4e-23
 Identities = 36/72 (50%), Positives = 54/72 (75%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +   R++ LH+V+E
Sbjct: 40  GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99

Query: 73  SSHDMILLLELL 84
           ++ ++IL+LE  
Sbjct: 100 NTSEIILILEYA 111

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 78.0 bits (193), Expect = 3e-19
 Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 5/75 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A VR+CR +  G +YAAKF++K+R    R    + EI  EV +L   R +  I+ LH
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 74

Query: 69 QVFESSHDMILLLEL 83
           +FE+  D++L+LEL
Sbjct: 75 DIFENKTDVVLILEL 89

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 75.0 bits (185), Expect = 5e-18
 Identities = 29/76 (38%), Positives = 53/76 (69%), Gaps = 5/76 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R    R    + +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80

Query: 69 QVFESSHDMILLLELL 84
          +V+E+  D+IL+LEL+
Sbjct: 81 EVYENKTDVILILELV 96

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 75.0 bits (185), Expect = 6e-18
 Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 5/75 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G +YAAKF++K++    R    + EI  EV++L     +  ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLH 81

Query: 69 QVFESSHDMILLLEL 83
           V+E+  D++L+LEL
Sbjct: 82 DVYENRTDVVLILEL 96

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 74.3 bits (183), Expect = 1e-17
 Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 5/76 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTD----LKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G +YAAKF++K++         + EI  EV++L     +  I+ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLH 81

Query: 69 QVFESSHDMILLLELL 84
           V+E+  D++L+LEL+
Sbjct: 82 DVYENRTDVVLILELV 97

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 74.0 bits (182), Expect = 2e-17
 Identities = 21/73 (28%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G++  V +C +   G + AAK ++   R    K E+ +E++V+     ++ ++QL+  FE
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKT--RGMKDKEEVKNEISVMNQLD-HANLIQLYDAFE 156

Query: 73  SSHDMILLLELLD 85
           S +D++L++E +D
Sbjct: 157 SKNDIVLVMEYVD 169

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 72.9 bits (179), Expect = 5e-17
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G +  V R  +R  G  +AAKF+     S   K  +  E+  +   R +  +V LH  FE
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR-HPTLVNLHDAFE 224

Query: 73  SSHDMILLLELLD 85
             ++M+++ E + 
Sbjct: 225 DDNEMVMIYEFMS 237

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 71.9 bits (177), Expect = 8e-17
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 4/71 (5%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G++  V RC +  +   Y AKF++ K      +  +  E+++L   R +  I+ LH+ FE
Sbjct: 16 GEFGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIAR-HRNILHLHESFE 71

Query: 73 SSHDMILLLEL 83
          S  +++++ E 
Sbjct: 72 SMEELVMIFEF 82

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 71.3 bits (175), Expect = 2e-16
 Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G +  V RC ++  G  + AKF+         K  + +E++++     + +++ LH  FE
Sbjct: 62  GAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIMNQLH-HPKLINLHDAFE 118

Query: 73  SSHDMILLLEL 83
             ++M+L+LE 
Sbjct: 119 DKYEMVLILEF 129

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 60.0 bits (146), Expect = 2e-12
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRST-------DLKAEILHEVAVLEACRCNSRIV 65
           G  + VRRC  +    +YA K +      +       +L+   L EV +L     +  I+
Sbjct: 28  GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 87

Query: 66  QLHQVFESSHDMILLLEL 83
           QL   +E++    L+ +L
Sbjct: 88  QLKDTYETNTFFFLVFDL 105

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 59.6 bits (145), Expect = 2e-12
 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +A V+ C +     +YA K + K+      ++ +  EV +L  C+ +  +++L + FE
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEKQPGHI--RSRVFREVEMLYQCQGHRNVLELIEFFE 81

Query: 73 SSHDMILLLELL 84
                L+ E +
Sbjct: 82 EEDRFYLVFEKM 93

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 59.1 bits (144), Expect = 3e-12
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 71
          G ++ VRRC  +  G ++AAK +  K+ S     ++  E  +    +  N  IV+LH   
Sbjct: 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN--IVRLHDSI 74

Query: 72 ESSHDMILLLEL 83
          +      L+ +L
Sbjct: 75 QEESFHYLVFDL 86

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 59.0 bits (143), Expect = 5e-12
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRST------DLKAEILHEVAVLEACRCNSRIVQ 66
           G  + VRRC  R  G ++A K +             +++     E  +L     +  I+ 
Sbjct: 105 GVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164

Query: 67  LHQVFESSHDMILLLEL 83
           L   +ESS  M L+ +L
Sbjct: 165 LIDSYESSSFMFLVFDL 181

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 58.3 bits (141), Expect = 6e-12
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKR---RSTDLKAEILHEVAVLEACRCNSRIVQLHQ 69
           G Y  VR   + +     A K + K +    +      I  EV +++    +  I +L++
Sbjct: 37  GSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYE 95

Query: 70  VFESSHDMILLLELL 84
           V+E    + L++EL 
Sbjct: 96  VYEDEQYICLVMELC 110

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 58.1 bits (141), Expect = 8e-12
 Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G ++ VRRC  +  G ++AAK +  K+ S     ++  E  +    + +  IV+LH   +
Sbjct: 40  GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQ 98

Query: 73  SSHDMILLLEL 83
                 L+ +L
Sbjct: 99  EESFHYLVFDL 109

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 57.7 bits (140), Expect = 1e-11
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G ++  R+C  +K+   +A K + K+       A    E+  L+ C  +  IV+LH+VF 
Sbjct: 22 GSFSICRKCVHKKSNQAFAVKIISKRME-----ANTQKEITALKLCEGHPNIVKLHEVFH 76

Query: 73 SSHDMILLLELL 84
                L++ELL
Sbjct: 77 DQLHTFLVMELL 88

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 56.4 bits (137), Expect = 3e-11
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 5/72 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 71
          G ++ V   + R  G  +A K ++K        + + +E+AVL+  +  N  IV L  ++
Sbjct: 20 GAFSEVFLVKQRLTGKLFALKCIKKSPAFR--DSSLENEIAVLKKIKHEN--IVTLEDIY 75

Query: 72 ESSHDMILLLEL 83
          ES+    L+++L
Sbjct: 76 ESTTHYYLVMQL 87

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 55.8 bits (135), Expect = 5e-11
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 9/73 (12%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE--ILHEVAVLEACRCNSRIVQLHQV 70
           G  + V RC+ +     YA K L+K      ++ E  +L  ++       +  I++L ++
Sbjct: 64  GATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLS-------HPNIIKLKEI 116

Query: 71  FESSHDMILLLEL 83
           FE+  ++ L+LEL
Sbjct: 117 FETPTEISLVLEL 129

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 55.7 bits (135), Expect = 6e-11
 Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 3   NTKITKSFPLGK------YATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLE 56
              I   F   +      +  V    +R +G +   K + K R    ++ +I  E+ VL+
Sbjct: 17  QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME-QIEAEIEVLK 75

Query: 57  ACRCNSRIVQLHQVFESSHDMILLLEL 83
           +   +  I+++ +VFE  H+M +++E 
Sbjct: 76  SLD-HPNIIKIFEVFEDYHNMYIVMET 101

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 55.4 bits (134), Expect = 8e-11
 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL---KAEILHEVAVLEACRCNSRIVQLHQ 69
           G ++ VRRC +R+ G Q+A K +   + ++       ++  E ++    + +  IV+L +
Sbjct: 35  GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVELLE 93

Query: 70  VFESSHDMILLLELLD 85
            + S   + ++ E +D
Sbjct: 94  TYSSDGMLYMVFEFMD 109

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 55.4 bits (134), Expect = 8e-11
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 4  TKITKSFPLGK------YATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA 57
          T+ T+ + L +      ++ VRRC     G +YAA  +  K+ S     ++  E  +   
Sbjct: 7  TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66

Query: 58 CRCNSRIVQLHQVFESSHDMILLLEL 83
           + +  IV+LH          L+ +L
Sbjct: 67 LK-HPNIVRLHDSISEEGHHYLIFDL 91

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 6/72 (8%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y+  +RC  +    ++A K + K +R      +   E+ +L     +  I+ L  V++
Sbjct: 33 GSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYD 86

Query: 73 SSHDMILLLELL 84
              + ++ EL+
Sbjct: 87 DGKYVYVVTELM 98

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G +  V +C+DR    +YA K + K        + IL EV +L+    +  I++L ++ E
Sbjct: 33  GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILE 91

Query: 73  SSHDMILLLELL 84
            S    ++ EL 
Sbjct: 92  DSSSFYIVGELY 103

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 53.9 bits (130), Expect = 2e-10
 Identities = 21/71 (29%), Positives = 30/71 (42%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G Y  V + R +++G  YA K      R    +A  L EV   E    +   V+L Q +E
Sbjct: 68  GSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE 127

Query: 73  SSHDMILLLEL 83
               + L  EL
Sbjct: 128 EGGILYLQTEL 138

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 53.6 bits (129), Expect = 3e-10
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G Y  V  CRD+    + A K +RK   ST   +++L EVAVL+    +  I++L+  FE
Sbjct: 48  GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD-HPNIMKLYDFFE 106

Query: 73  SSHDMILLLEL 83
              +  L++E 
Sbjct: 107 DKRNYYLVMEC 117

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 53.1 bits (128), Expect = 5e-10
 Identities = 14/80 (17%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 71
           G  + V +  + +    YA K++  +           +E+A L   +  + +I++L+   
Sbjct: 39  GGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97

Query: 72  ESSHDMILLLEL--LDLNHH 89
            +   + +++E   +DLN  
Sbjct: 98  ITDQYIYMVMECGNIDLNSW 117

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 52.8 bits (127), Expect = 7e-10
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G +  V +C+DR    +YA K + K        + IL EV +L+    +  I++L ++ E
Sbjct: 33  GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILE 91

Query: 73  SSHDMILLLELL 84
            S    ++ EL 
Sbjct: 92  DSSSFYIVGELY 103

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  V+    +    + AAK + K             E+ ++++   +  I++L++ FE
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLD-HPNIIRLYETFE 76

Query: 73 SSHDMILLLEL 83
           + D+ L++EL
Sbjct: 77 DNTDIYLVMEL 87

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 50.9 bits (122), Expect = 3e-09
 Identities = 11/72 (15%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 71
          G  + V +  + +    YA K++  +           +E+A L   +  + +I++L+   
Sbjct: 20 GGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 78

Query: 72 ESSHDMILLLEL 83
           +   + +++E 
Sbjct: 79 ITDQYIYMVMEC 90

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 50.8 bits (122), Expect = 3e-09
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
           G +  V  C+D+  G + A K + K++ +    K  +L EV +L+    +  I++L++ F
Sbjct: 37  GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFF 95

Query: 72  ESSHDMILLLEL 83
           E      L+ E+
Sbjct: 96  EDKGYFYLVGEV 107

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 49.2 bits (118), Expect = 1e-08
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
           G +A      D      +A K + K        + ++  E+++  +   +  +V  H  F
Sbjct: 52  GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFF 110

Query: 72  ESSHDMILLLEL 83
           E +  + ++LEL
Sbjct: 111 EDNDFVFVVLEL 122

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 49.3 bits (118), Expect = 1e-08
 Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 11/77 (14%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G    V  C  R+ G + A K L    +          EV           IV +  V+E
Sbjct: 40  GVNGKVLECFHRRTGQKCALKLLYDSPK-------ARQEVDHHWQASGGPHIVCILDVYE 92

Query: 73  SSHDMI----LLLELLD 85
           + H       +++E ++
Sbjct: 93  NMHHGKRCLLIIMECME 109

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 49.0 bits (117), Expect = 1e-08
 Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 71
           G  + V +  + +    YA K++  +           +E+A L   +  + +I++L+   
Sbjct: 67  GGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 125

Query: 72  ESSHDMILLLE 82
            +   + +++E
Sbjct: 126 ITDQYIYMVME 136

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 48.9 bits (117), Expect = 1e-08
 Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKR------RSTDLKAEILHEVAVLEACRCNSRIVQ 66
           G    V+   +RK   + A + + K++      R  D    +  E+ +L+    +  I++
Sbjct: 146 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIK 204

Query: 67  LHQVFESSHDMILLLEL 83
           +   F++  D  ++LEL
Sbjct: 205 IKNFFDAE-DYYIVLEL 220

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 48.6 bits (116), Expect = 2e-08
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 11/77 (14%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G    V +  +++   ++A K L+   +          EV +         IV++  V+E
Sbjct: 73  GINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRASQCPHIVRIVDVYE 125

Query: 73  SSHDMI----LLLELLD 85
           + +       +++E LD
Sbjct: 126 NLYAGRKCLLIVMECLD 142

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR------RSTDLKAEILHEVAVLEACRCNSRIVQ 66
          G    V+   +RK   + A K + K++      R  D    +  E+ +L+    +  I++
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIK 79

Query: 67 LHQVFESSHDMILLLEL 83
          +   F+ + D  ++LEL
Sbjct: 80 IKNFFD-AEDYYIVLEL 95

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 48.1 bits (115), Expect = 3e-08
 Identities = 16/73 (21%), Positives = 31/73 (42%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G++ +V +C  R +G  YA K  +K    +  +   L EV        +S +V+    + 
Sbjct: 22 GEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA 81

Query: 73 SSHDMILLLELLD 85
              M++  E  +
Sbjct: 82 EDDHMLIQNEYCN 94

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 48.0 bits (115), Expect = 3e-08
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +A      D      +A K + K        + ++  E+++  +   +  +V  H  F
Sbjct: 26 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFF 84

Query: 72 ESSHDMILLLEL 83
          E +  + ++LEL
Sbjct: 85 EDNDFVFVVLEL 96

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 47.4 bits (113), Expect = 5e-08
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G  A V R R +K G  +A K          +    + E  VL+    +  IV+L  + E
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV-QMREFEVLKKLN-HKNIVKLFAIEE 77

Query: 73 --SSHDMILLLEL 83
            ++   +L++E 
Sbjct: 78 ETTTRHKVLIMEF 90

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 46.6 bits (111), Expect = 9e-08
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G +      +  ++G QY  K +   R S+  + E   EVAVL   + +  IVQ  + FE
Sbjct: 35  GSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK-HPNIVQYRESFE 93

Query: 73  SSHDMILLLE 82
            +  + ++++
Sbjct: 94  ENGSLYIVMD 103

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 11/76 (14%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G    V +  +++   ++A K L+   +          EV +         IV++  V+E
Sbjct: 29 GINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRASQCPHIVRIVDVYE 81

Query: 73 SSHDMI----LLLELL 84
          + +       +++E L
Sbjct: 82 NLYAGRKCLLIVMECL 97

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSR---IV 65
           G + TV       +  Q A K + + R               EVA+L           ++
Sbjct: 42  GGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVI 101

Query: 66  QLHQVFESSHDMILLLEL 83
           +L   FE+    +L+LE 
Sbjct: 102 RLLDWFETQEGFMLVLER 119

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 46.0 bits (109), Expect = 2e-07
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G  A V R R +K G  +A K          +    + E  VL+    +  IV+L  + E
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV-QMREFEVLKKLN-HKNIVKLFAIEE 77

Query: 73 --SSHDMILLLEL 83
            ++   +L++E 
Sbjct: 78 ETTTRHKVLIMEF 90

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILH----EVAVLEACRCNSR-IVQL 67
           G + +V       +    A K + K R S   +         EV +L+        +++L
Sbjct: 54  GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 113

Query: 68  HQVFESSHDMILLLE 82
              FE     +L+LE
Sbjct: 114 LDWFERPDSFVLILE 128

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +A V R      G + A K + KK      +   + +EV +    + +  I++L+  F
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSILELYNYF 80

Query: 72 ESSHDMILLLEL 83
          E S+ + L+LE+
Sbjct: 81 EDSNYVYLVLEM 92

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 44.3 bits (105), Expect = 7e-07
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 12/84 (14%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-----------KAEILHEVAVLEACRCN 61
           G Y  V  C+++   ++ A K ++K +                  EI +E+++L++   +
Sbjct: 47  GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-H 105

Query: 62  SRIVQLHQVFESSHDMILLLELLD 85
             I++L  VFE      L+ E  +
Sbjct: 106 PNIIKLFDVFEDKKYFYLVTEFYE 129

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 43.7 bits (104), Expect = 9e-07
 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          GK+  V   R++++    A K L K +     ++ ++  EV +    R +  I++L+  F
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYF 78

Query: 72 ESSHDMILLLEL 83
            +  + L+LE 
Sbjct: 79 HDATRVYLILEY 90

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          GK+  V   R+++N    A K L K +     ++ ++  E+ +    R +  I++++  F
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYF 83

Query: 72 ESSHDMILLLE 82
               + L+LE
Sbjct: 84 HDRKRIYLMLE 94

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 43.0 bits (102), Expect = 2e-06
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y   ++ R + +G     K L     +   K  ++ EV +L   + +  IV+ +    
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HPNIVRYYDRII 75

Query: 73 SSHDMIL 79
             +  L
Sbjct: 76 DRTNTTL 82

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 7/77 (9%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE------ILHEVAVLEACRCNSRIVQ 66
           G +  V    D++   +   KF++K++   D   E      +  E+A+L     ++ I++
Sbjct: 35  GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIK 93

Query: 67  LHQVFESSHDMILLLEL 83
           +  +FE+     L++E 
Sbjct: 94  VLDIFENQGFFQLVMEK 110

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR-IVQLHQVF 71
           G    V + R RK G   A K +R+     + K  IL ++ V+     +   IVQ    F
Sbjct: 36  GTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK-RILMDLDVVLKS-HDCPYIVQCFGTF 93

Query: 72  ESSHDMILLLELLD 85
            ++ D+ + +EL+ 
Sbjct: 94  ITNTDVFIAMELMG 107

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 41.1 bits (97), Expect = 9e-06
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 7/60 (11%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  V + + R +G  Y  K ++          +   EV  L     +  IV  +  ++
Sbjct: 22 GGFGQVFKAKHRIDGKTYVIKRVKYNNE------KAEREVKALAKLD-HVNIVHYNGCWD 74

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 40.9 bits (96), Expect = 1e-05
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 9/85 (10%)

Query: 12  LGK--YATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSR-IVQL 67
           LGK  +  V  C+ R  G  YA K L KKR +    +A  L+E  +LE  + NSR +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE--KVNSRFVVSL 249

Query: 68  HQVFESSHDMILLLELL---DLNHH 89
              +E+   + L+L L+   DL  H
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFH 274

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 11/59 (18%), Positives = 18/59 (30%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
           G  + V   RD +    +A K       ++  + E LHE     A        +     
Sbjct: 73  GDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRR 131

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 40.4 bits (94), Expect = 2e-05
 Identities = 11/65 (16%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  V R   +  G Q A K  R++    + +     E+ +++    +  +V   +V +
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER-WCLEIQIMKKLN-HPNVVSAREVPD 82

Query: 73 SSHDM 77
              +
Sbjct: 83 GLQKL 87

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR-IVQLHQVF 71
           G Y +V +   + +G   A K +R      + K ++L ++ V+     +   IVQ +   
Sbjct: 33  GAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQK-QLLMDLDVVMRS-SDCPYIVQFYGAL 90

Query: 72  ESSHDMILLLELLD 85
               D  + +EL+ 
Sbjct: 91  FREGDCWICMELMS 104

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +A V+  R    G + A K + K + +     ++  EV +++    +  IV+L +V E
Sbjct: 26 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN-HPNIVKLFEVIE 84

Query: 73 SSHDMILLLEL 83
          +   + L++E 
Sbjct: 85 TEKTLYLIMEY 95

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 39.8 bits (93), Expect = 2e-05
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 6/71 (8%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G   T+   R   +    A K +  +  S         EV +L     +  +++     +
Sbjct: 35 GAEGTIV-YRGMFDNRDVAVKRILPECFSF-----ADREVQLLRESDEHPNVIRYFCTEK 88

Query: 73 SSHDMILLLEL 83
                + +EL
Sbjct: 89 DRQFQYIAIEL 99

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 39.5 bits (93), Expect = 3e-05
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +  V+    +  G + A K L +++ RS D+  +I  E+  L+  R +  I++L+QV 
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLYQVI 80

Query: 72 ESSHDMILLLE 82
           +  D  +++E
Sbjct: 81 STPTDFFMVME 91

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 15/71 (21%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +  V+     K   + A KF+ ++  + +D+   +  E++ L+  R +  I++L+ V 
Sbjct: 20 GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLYDVI 78

Query: 72 ESSHDMILLLE 82
           +  D+++++E
Sbjct: 79 TTPTDIVMVIE 89

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR-IVQLHQVF 71
          G Y  V + R   +G   A K +R    S + K  +L ++ +      +    V  +   
Sbjct: 18 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-RLLMDLDISMRT-VDCPFTVTFYGAL 75

Query: 72 ESSHDMILLLELLD 85
              D+ + +EL+D
Sbjct: 76 FREGDVWICMELMD 89

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 39.0 bits (91), Expect = 4e-05
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 9/77 (11%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLH---- 68
           G +A V   +D  +G +YA K L       +    I+ EV  ++    +  IVQ      
Sbjct: 39  GGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS 96

Query: 69  ---QVFESSHDMILLLE 82
              +  ++     LLL 
Sbjct: 97  IGKEESDTGQAEFLLLT 113

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 39.0 bits (91), Expect = 4e-05
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 6/71 (8%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G   TV   +    G   A K +             L E+ +L     +  +++ +    
Sbjct: 26 GSSGTVV-FQGSFQGRPVAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRYYCSET 79

Query: 73 SSHDMILLLEL 83
          +   + + LEL
Sbjct: 80 TDRFLYIALEL 90

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 38.9 bits (91), Expect = 5e-05
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  V   +++ +   YA K +R   R    + +++ EV  L     +  IV+    + 
Sbjct: 16 GGFGVVFEAKNKVDDCNYAIKRIRLPNRELA-REKVMREVKALAKLE-HPGIVRYFNAWL 73

Query: 73 SSHDM 77
            +  
Sbjct: 74 EKNTT 78

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 38.9 bits (91), Expect = 5e-05
 Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +   R  RD+      A K++ +      +   +  E+    + R +  IV+  +V  
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLR-HPNIVRFKEVIL 86

Query: 73 SSHDMILLLE 82
          +   + +++E
Sbjct: 87 TPTHLAIIME 96

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 39.0 bits (91), Expect = 5e-05
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 9/85 (10%)

Query: 12  LGK--YATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSR-IVQL 67
           LG+  +  V  C+ +  G  YA K L KKR +        + E  +L   + +SR IV L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRFIVSL 250

Query: 68  HQVFESSHDMILLLELL---DLNHH 89
              FE+  D+ L++ ++   D+ +H
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYH 275

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 39.1 bits (91), Expect = 5e-05
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)

Query: 12  LGK--YATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSR--IVQ 66
           +G+  +  V  CR    G  YA K L KKR +    +   L+E  +L          IV 
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256

Query: 67  LHQVFESSHDMILLLELL---DLNHH 89
           +   F +   +  +L+L+   DL++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYH 282

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V+   +R      A K +   +R+ D    I  E+ + +    +  +V+ +    
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRR 75

Query: 73 SSHDMILLLE 82
            +   L LE
Sbjct: 76 EGNIQYLFLE 85

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 38.6 bits (90), Expect = 8e-05
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +  V+  +    G + A K L +++ RS D+  +I  E+  L+  R +  I++L+QV 
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHIIKLYQVI 85

Query: 72 ESSHDMILLLE 82
           +  D+ +++E
Sbjct: 86 STPSDIFMVME 96

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 38.1 bits (89), Expect = 9e-05
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF- 71
           G ++ V       +G  YA K +    +    + E   E  +      +  I++L     
Sbjct: 40  GGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFN-HPNILRLVAYCL 96

Query: 72  ---ESSHDMILLLEL 83
               + H+  LLL  
Sbjct: 97  RERGAKHEAWLLLPF 111

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V+   +R      A K +   +R+ D    I  E+ + +    +  +V+ +    
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRR 75

Query: 73 SSHDMILLLE 82
            +   L LE
Sbjct: 76 EGNIQYLFLE 85

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 3/73 (4%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRK-KRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQ 69
                     D++ G  +        +R  ++   ++  EV  L   R   N +  ++H 
Sbjct: 84  EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHL 143

Query: 70  VFESSHDMILLLE 82
            F    D++   +
Sbjct: 144 RFIFPFDLVKDPQ 156

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR--RSTDLKAEILHEVAVLEACRCNSRIVQLHQV 70
          G Y  V+   D +   + A K L+KK+  R  + +A +  E+ +L   R +  ++QL  V
Sbjct: 16 GSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HKNVIQLVDV 74

Query: 71 --FESSHDMILLLE 82
             E    M +++E
Sbjct: 75 LYNEEKQKMYMVME 88

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 19/90 (21%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS---------- 62
           G ++TV   +D  N T  A K +R  +  T+       E+ +L+                
Sbjct: 30  GHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE---AAEDEIKLLQRVNDADNTKEDSMGAN 86

Query: 63  RIVQLHQVFE-----SSHDMILLLELLDLN 87
            I++L   F        H ++++ E+L  N
Sbjct: 87  HILKLLDHFNHKGPNGVH-VVMVFEVLGEN 115

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 37.0 bits (85), Expect = 2e-04
 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 5/73 (6%)

Query: 11  PLGK--YATVRRCRDRKNGTQYAAKFLRK-KRRSTDLKAEILHEVAVLEACR--CNSRIV 65
            LG+          D++ G  +        +R  ++   ++  EV  L   R   N +  
Sbjct: 85  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 144

Query: 66  QLHQVFESSHDMI 78
           ++H  F    D++
Sbjct: 145 KVHLRFIFPFDLV 157

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 37.0 bits (86), Expect = 3e-04
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 8/88 (9%)

Query: 5   KITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN--- 61
           +I      G +  V +  DR      A K ++ K+   +   +   EV +LE    +   
Sbjct: 57  EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLN---QAQIEVRLLELMNKHDTE 113

Query: 62  --SRIVQLHQVFESSHDMILLLELLDLN 87
               IV L + F   + + L+ E+L  N
Sbjct: 114 MKYYIVHLKRHFMFRNHLCLVFEMLSYN 141

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 12  LGK--YATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
           +GK  +  V   +       YA K++ K++    +    +  E+ +++       +V L 
Sbjct: 23  IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH-PFLVNLW 81

Query: 69  QVFESSHDMILLLELL---DLNHH 89
             F+   DM ++++LL   DL +H
Sbjct: 82  YSFQDEEDMFMVVDLLLGGDLRYH 105

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 11/85 (12%), Positives = 27/85 (31%), Gaps = 18/85 (21%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKR---------------RSTDLKAEILHEVAVLEA 57
           GK+  +  C   K+   YA K   K                        +  +E+ ++  
Sbjct: 42  GKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITD 99

Query: 58  CRCNSRIVQLHQVFESSHDMILLLE 82
            + N   +    +  +  ++ ++ E
Sbjct: 100 IK-NEYCLTCEGIITNYDEVYIIYE 123

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 35.7 bits (83), Expect = 7e-04
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 12  LGK--YATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE-ILHEVAVLEACRCNSRIVQLH 68
           LG+  ++TV   R+     +YA K L K+    + K   +  E  V+     +   V+L+
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLY 96

Query: 69  QVFESSHDMILLLE 82
             F+    +   L 
Sbjct: 97  FTFQDDEKLYFGLS 110

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 35.4 bits (82), Expect = 8e-04
 Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  V + ++++ G   AAK +  K  S +   + + E+ +L  C     IV+L   + 
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPY-IVKLLGAYY 86

Query: 73 SSHDMILLLELLD 85
              + +++E   
Sbjct: 87 HDGKLWIMIEFCP 99

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	91
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.95
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.92
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.91
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.91
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.9
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.9
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.89
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.89
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.89
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.88
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.88
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.88
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.88
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.87
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.86
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.85
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.85
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.85
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.84
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.81
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.81
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.81
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.8
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.8
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.8
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.8
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.8
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.79
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.79
3uqc_A	286	Probable conserved transmembrane protein; structur	99.79
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.79
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.79
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.79
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.79
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.79
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.78
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.78
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.78
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.78
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.78
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.78
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.78
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.77
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.77
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.77
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.77
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.77
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.77
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.77
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.77
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.77
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.77
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.76
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.76
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.76
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.76
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.76
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.76
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.76
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.76
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.75
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.75
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.75
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.75
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.75
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.75
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.75
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.75
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.74
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.74
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.74
3niz_A	311	Rhodanese family protein; structural genomics, str	99.74
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.74
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.74
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.74
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.74
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.74
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.74
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.74
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.74
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.74
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.73
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.73
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.73
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.73
3bhy_A	283	Death-associated protein kinase 3; death associate	99.73
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.73
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.73
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.73
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.73
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.73
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.73
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.73
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.73
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.73
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.72
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.72
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.72
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.72
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.72
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.72
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.72
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.72
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.72
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.72
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.72
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.72
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.72
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.72
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.72
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.72
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.71
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.71
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.71
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.71
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.71
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.71
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.71
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.71
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.71
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.71
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.7
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.7
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.7
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.7
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.7
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.7
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.7
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.7
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.7
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.7
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.7
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.7
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.7
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.7
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.7
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.7
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.7
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.7
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.7
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.69
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.69
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.69
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.69
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.69
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.69
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.69
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.68
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.68
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.68
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.68
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.68
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.68
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.68
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.68
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.68
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.67
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.67
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.67
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.67
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.67
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.67
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.67
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.67
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.67
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.67
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.67
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.67
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.67
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.66
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.66
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.66
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.66
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.66
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.66
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.65
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.65
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.65
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.65
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.65
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.65
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.65
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.64
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.64
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.64
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.64
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.63
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.63
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.63
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.63
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.63
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.63
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.63
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.62
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.62
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.62
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.62
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.62
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.61
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.61
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.61
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.61
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.6
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.6
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.6
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.6
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.6
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.6
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.6
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.6
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.6
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.6
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.59
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.59
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.59
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.59
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.58
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.58
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.58
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.58
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.57
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.57
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.57
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.57
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.57
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.56
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.56
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.56
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.56
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.56
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.56
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.56
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.56
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.55
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.54
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.54
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.54
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.53
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.52
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.52
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.52
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.51
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.51
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.51
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.49
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.49
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.47
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.45
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.45
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.45
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.39
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.35
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.99
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.93
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.76
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.7
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.23
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.87
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.62
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.61
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.59
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.9
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.78
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.68
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.31
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.16
3ats_A	357	Putative uncharacterized protein; hypothetical pro	95.01
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	94.65
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	94.47
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	94.41
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	90.75
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	89.87
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	86.02
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	85.49
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	83.67

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.95  E-value=2e-27  Score=131.33  Aligned_cols=89  Identities=21%  Similarity=0.301  Sum_probs=75.8

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+++.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++ ||||+++++.+.+++.+|+|
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~yiV  101 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK-HPNIVQYRESFEENGSLYIV  101 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEEE
Confidence            68999999999999999999999999999999999876655555667999999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||||++|+|+
T Consensus       102 mEy~~gg~L~  111 (350)
T 4b9d_A          102 MDYCEGGDLF  111 (350)
T ss_dssp             EECCTTCBHH
T ss_pred             EeCCCCCcHH
Confidence            9999999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.92  E-value=8.8e-26  Score=123.17  Aligned_cols=88  Identities=19%  Similarity=0.221  Sum_probs=78.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+.+.... ....+.+.+|+.+++.++ ||||+++++++++.+.+|+|
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~yiv  110 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG  110 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEE
Confidence            5799999999999999999999999999999999865321 222456899999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||||++|+|+
T Consensus       111 mEy~~gG~L~  120 (311)
T 4aw0_A          111 LSYAKNGELL  120 (311)
T ss_dssp             ECCCTTEEHH
T ss_pred             EecCCCCCHH
Confidence            9999999885

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.91  E-value=1.2e-24  Score=120.16  Aligned_cols=86  Identities=13%  Similarity=0.214  Sum_probs=76.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|++.+.||+|+||.||++.+..++..+|+|.+.......  .+.+.+|+.+++.++ ||||+++++++.+.+.+|+||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~ivm  150 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVM  150 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS--GGGGHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH--HHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEE
Confidence            35888999999999999999999999999999997654322  345789999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |||++|+|.
T Consensus       151 Ey~~gg~L~  159 (346)
T 4fih_A          151 EFLEGGALT  159 (346)
T ss_dssp             CCCTTEEHH
T ss_pred             eCCCCCcHH
Confidence            999999875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.91  E-value=3.3e-24  Score=120.90  Aligned_cols=86  Identities=13%  Similarity=0.214  Sum_probs=76.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+.......  .+.+.+|+.+++.++ ||||+++++++.+.+.+|+||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS--GGGHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH--HHHHHHHHHHHHhCC-CCCCCceEEEEEECCEEEEEE
Confidence            35889999999999999999999999999999997654322  345889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |||++|+|.
T Consensus       228 Ey~~gG~L~  236 (423)
T 4fie_A          228 EFLEGGALT  236 (423)
T ss_dssp             ECCTTEEHH
T ss_pred             eCCCCCcHH
Confidence            999999875

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.90  E-value=1.4e-23  Score=113.84  Aligned_cols=86  Identities=19%  Similarity=0.262  Sum_probs=74.4

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCeEEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMIL   79 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~~~l   79 (91)
                      |++.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++ ||||+++++++.+    ...+|+
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~~~l  106 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEEETTEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEeeccCCCcEEEE
Confidence            36677899999999999999999999999999876554555667999999999998 8999999998865    346899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      |||||++|+|.
T Consensus       107 vmEy~~gg~L~  117 (290)
T 3fpq_A          107 VTELMTSGTLK  117 (290)
T ss_dssp             EEECCCSCBHH
T ss_pred             EEeCCCCCCHH
Confidence            99999999985

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.90  E-value=8.7e-24  Score=113.86  Aligned_cols=87  Identities=25%  Similarity=0.397  Sum_probs=70.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+.+.... ......+.+|+.+++.++ ||||+++++++.+.+.+|+|
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEE
Confidence            5799999999999999999999999999999999865432 223456889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+ +|+|+
T Consensus        92 mEy~-~g~L~  100 (275)
T 3hyh_A           92 IEYA-GNELF  100 (275)
T ss_dssp             EECC-CEEHH
T ss_pred             EeCC-CCCHH
Confidence            9999 45553

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.89  E-value=4.7e-23  Score=112.19  Aligned_cols=87  Identities=15%  Similarity=0.274  Sum_probs=72.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+..... ....+.+.+|+.+++.++ ||||+++++.+...+      
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~~   82 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLE-HPGIVRYFNAWLEKNTTEKLQ   82 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS-HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEEC------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC-HHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEecCcccccc
Confidence            579999999999999999999999999999999976542 333556899999999998 899999999886543      


Q ss_pred             ------eEEEEEeccCCCCCC
Q psy8005          76 ------DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ------~~~lv~e~~~~g~L~   90 (91)
                            .+|++||||++|+|.
T Consensus        83 ~~~~~~~l~ivmE~~~gg~L~  103 (299)
T 4g31_A           83 PSSPKVYLYIQMQLCRKENLK  103 (299)
T ss_dssp             ----CEEEEEEEECCCSCCHH
T ss_pred             ccCCCcEEEEEEecCCCCcHH
Confidence                  479999999999874

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.89  E-value=5.9e-23  Score=111.79  Aligned_cols=86  Identities=15%  Similarity=0.240  Sum_probs=71.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++...     .++..+|+|.+....  ....+.+.+|+.+++.++ ||||+++++++..++.
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~~   89 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQ-HEHIVKFYGVCVEGDP   89 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--HHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--hHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCE
Confidence            46788899999999999999864     346789999997542  333567999999999998 8999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      +++|||||++|+|.
T Consensus        90 ~~lV~Ey~~~G~L~  103 (299)
T 4asz_A           90 LIMVFEYMKHGDLN  103 (299)
T ss_dssp             EEEEEECCTTCBHH
T ss_pred             EEEEEEcCCCCcHH
Confidence            99999999999984

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.89  E-value=1.3e-24  Score=118.34  Aligned_cols=88  Identities=20%  Similarity=0.267  Sum_probs=69.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|++.+.||+|+||.||++.+.   .++..+|+|.+.+..........+.+|+.+++.++ ||||+++++.+.+++.+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~  102 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIVKLHYAFQTEGKLY  102 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCC-CTTEECEEEEEEETTEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEE
Confidence            57999999999999999999874   35678999999765433222335778999999998 899999999999999999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +|||||+||+|.
T Consensus       103 ivmEy~~gg~L~  114 (304)
T 3ubd_A          103 LILDFLRGGDLF  114 (304)
T ss_dssp             EEECCCTTCEEH
T ss_pred             EEEEcCCCCCHH
Confidence            999999999985

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.88  E-value=9.2e-23  Score=118.70  Aligned_cols=87  Identities=23%  Similarity=0.469  Sum_probs=77.8

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+.+.||+|+||.||++.+..++..+|+|.+....  ....+.+.+|+.+++.++ ||||+++++.+.+...+|++
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~iv  232 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMI  232 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTC-CTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEEE
Confidence            468999999999999999999999999999999997643  223456889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||||++|+|+
T Consensus       233 ~E~~~gg~L~  242 (573)
T 3uto_A          233 YEFMSGGELF  242 (573)
T ss_dssp             EECCCCCBHH
T ss_pred             EeecCCCcHH
Confidence            9999999884

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.88  E-value=2.5e-22  Score=110.56  Aligned_cols=86  Identities=13%  Similarity=0.223  Sum_probs=72.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      +++.+.+.||+|+||.||++...     .++..+|+|.+....  ....+.+.+|+.+++.++ ||||+++++++...+.
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~~  117 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRP  117 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS--HHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCE
Confidence            35677889999999999999864     346789999997542  333567999999999998 8999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      +++|||||++|+|.
T Consensus       118 ~~lV~Ey~~~G~L~  131 (329)
T 4aoj_A          118 LLMVFEYMRHGDLN  131 (329)
T ss_dssp             EEEEEECCTTCBHH
T ss_pred             EEEEEEcCCCCcHH
Confidence            99999999999984

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.88  E-value=4.1e-23  Score=113.75  Aligned_cols=81  Identities=21%  Similarity=0.233  Sum_probs=71.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.++.....       .+|+.+++.++ ||||+++++.+.+.+.+|+||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-------~~E~~il~~l~-HpnIV~l~~~~~~~~~~~ivm  129 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAGLS-SPRIVPLYGAVREGPWVNIFM  129 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-------THHHHTTTTCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH-------HHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEE
Confidence            4567788999999999999999999999999999765432       35889999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |||++|+|.
T Consensus       130 Ey~~gg~L~  138 (336)
T 4g3f_A          130 ELLEGGSLG  138 (336)
T ss_dssp             CCCTTCBHH
T ss_pred             eccCCCcHH
Confidence            999999985

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.88  E-value=1.3e-22  Score=110.84  Aligned_cols=87  Identities=14%  Similarity=0.194  Sum_probs=71.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      +++++.+.||+|+||.||+|...     ..+..||+|.+..... ....+.+.+|+.+++.++ ||||+++++++..++.
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~-~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~~~  103 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQ-HPNVVCLLGVVTKDQP  103 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC-C-CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC-hHHHHHHHHHHHHHHhCC-CCCCCCcceEEEECCE
Confidence            45678899999999999999753     3467899999975432 233567999999999998 8999999999998899


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      +++|||||++|+|.
T Consensus       104 ~~lV~Ey~~~G~L~  117 (308)
T 4gt4_A          104 LSMIFSYCSHGDLH  117 (308)
T ss_dssp             CEEEEECCSSCBHH
T ss_pred             EEEEEEcCCCCcHH
Confidence            99999999999984

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.87  E-value=1.8e-21  Score=109.37  Aligned_cols=86  Identities=19%  Similarity=0.320  Sum_probs=73.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee------CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~------~~   75 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++ ||||+++++++..      ..
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSSCTTTCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcC-CCCcceEeeeeecccccccCC
Confidence            4699999999999999999999999999999999766544444566889999999998 8999999988754      35


Q ss_pred             eEEEEEeccCCCCC
Q psy8005          76 DMILLLELLDLNHH   89 (91)
Q Consensus        76 ~~~lv~e~~~~g~L   89 (91)
                      .+|+|||||++ +|
T Consensus       133 ~~~ivmE~~~g-~L  145 (398)
T 4b99_A          133 SVYVVLDLMES-DL  145 (398)
T ss_dssp             CEEEEEECCSE-EH
T ss_pred             EEEEEEeCCCC-CH
Confidence            78999999974 44

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.86  E-value=2.5e-21  Score=114.00  Aligned_cols=89  Identities=22%  Similarity=0.369  Sum_probs=72.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHH---HHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHE---VAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      |++|.+.+.||+|+||.||.+.+..++..+|+|.+.+...... ......+|   +.++..++ ||||+++++++.+.+.
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~-HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCC-CCCEeEEEEEEEECCE
Confidence            5789999999999999999999999999999999976532211 11223333   45555666 8999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      +|+|||||+||+|+
T Consensus       267 lylVmEy~~GGdL~  280 (689)
T 3v5w_A          267 LSFILDLMNGGDLH  280 (689)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEecCCCCcHH
Confidence            99999999999985

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.85  E-value=1.8e-21  Score=106.23  Aligned_cols=84  Identities=15%  Similarity=0.203  Sum_probs=69.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +++.+.+.||+|+||.||++...   ..+|+|.++.........+.+.+|+.+++.++ ||||+++++++. .+.+++||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~-HpNIV~l~g~~~-~~~~~iVm  110 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR-HVNILLFMGYMT-KDNLAIVT  110 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSCEEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEE-CCeEEEEE
Confidence            46778899999999999999753   35899998765444444567999999999998 899999999765 45689999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |||++|+|.
T Consensus       111 Ey~~gGsL~  119 (307)
T 3omv_A          111 QWCEGSSLY  119 (307)
T ss_dssp             ECCSSCBHH
T ss_pred             EcCCCCCHH
Confidence            999999985

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.85  E-value=7.9e-21  Score=105.68  Aligned_cols=85  Identities=14%  Similarity=0.205  Sum_probs=72.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      +.|++.+.||+|+||.||++.+.   .++..+|+|.+.....    ...+.+|+.++..+.+||||+++++++...+.+|
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~----~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~   96 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH----PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV   96 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC----HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC----HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence            46999999999999999999874   3467899999865432    3457889999999866899999999999999999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +||||+++|+|.
T Consensus        97 lvmE~~~g~~L~  108 (361)
T 4f9c_A           97 IAMPYLEHESFL  108 (361)
T ss_dssp             EEEECCCCCCHH
T ss_pred             EEEeCCCcccHH
Confidence            999999999874

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.85  E-value=5.7e-21  Score=105.97  Aligned_cols=88  Identities=14%  Similarity=0.192  Sum_probs=72.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-----CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~   75 (91)
                      ++|++.+.||+|+||.||++.....     +..+|+|.+..... ......+.+|+.++..+.+||||+++++.+.. ++
T Consensus        64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~-~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~  142 (353)
T 4ase_A           64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  142 (353)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence            5688999999999999999987543     34799999976543 23345689999999999977999999998754 45


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      .+++|||||++|+|.
T Consensus       143 ~~~iV~Ey~~~G~L~  157 (353)
T 4ase_A          143 PLMVIVEFCKFGNLS  157 (353)
T ss_dssp             CCEEEEECCTTEEHH
T ss_pred             EEEEEEEcCCCCCHH
Confidence            789999999999874

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.84  E-value=2.3e-20  Score=102.70  Aligned_cols=88  Identities=22%  Similarity=0.346  Sum_probs=78.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||+|+||.||.+.+..++..+|+|.+..........+.+.+|+.+++.++ ||||+++++.+...+..++||
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEEE
Confidence            5799999999999999999999999999999999876544444566889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        94 e~~~~~~L~  102 (328)
T 3fe3_A           94 EYASGGEVF  102 (328)
T ss_dssp             CCCTTCBHH
T ss_pred             ECCCCCcHH
Confidence            999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.81  E-value=1.2e-19  Score=100.92  Aligned_cols=88  Identities=22%  Similarity=0.363  Sum_probs=78.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++ ||||+++++.+...+..+++|
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEEE
Confidence            3688999999999999999999989999999999876544444566889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       108 e~~~gg~L~  116 (362)
T 2bdw_A          108 DLVTGGELF  116 (362)
T ss_dssp             CCCCSCBHH
T ss_pred             ecCCCCCHH
Confidence            999999874

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.81  E-value=8.9e-20  Score=99.51  Aligned_cols=80  Identities=14%  Similarity=0.199  Sum_probs=62.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHH--HHHHHHHhcCCCCCeeeeheeeeeCC----e
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEIL--HEVAVLEACRCNSRIVQLHQVFESSH----D   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~l~~~~~~~~----~   76 (91)
                      +|.+.+.||+|+||.||++..  ++..||+|.+....     ...+.  .|+..+..++ ||||+++++.+..++    .
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~-HpNIv~l~g~~~~~~~~~~~   75 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCC-CCCCCcEEEEEEecCCCceE
Confidence            577889999999999999976  57899999986542     22233  3444455677 899999999887543    5


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      +++||||+++|+|.
T Consensus        76 ~~lV~Ey~~~gsL~   89 (303)
T 3hmm_A           76 LWLVSDYHEHGSLF   89 (303)
T ss_dssp             EEEEEECCTTCBHH
T ss_pred             EEEEecCCCCCcHH
Confidence            79999999999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.81  E-value=1.2e-19  Score=103.17  Aligned_cols=88  Identities=20%  Similarity=0.348  Sum_probs=76.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++ ||||+++++.+...+..+++|
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK-HPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCC-BTTBCCEEEEEECSSEEEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC-CcCCCeEEEEEEECCEEEEEE
Confidence            4689999999999999999999999999999999876544444566899999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        90 E~~~gg~L~   98 (444)
T 3soa_A           90 DLVTGGELF   98 (444)
T ss_dssp             CCCBCCBHH
T ss_pred             EeCCCCCHH
Confidence            999999874

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.80  E-value=2.4e-19  Score=99.78  Aligned_cols=88  Identities=32%  Similarity=0.589  Sum_probs=76.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch----hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+.......    ...+.+.+|+.+++.+. ||||+++++.+......
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC-CcCCCcEEEEEEeCCEE
Confidence            46899999999999999999999999999999998654321    12456889999999998 89999999999999999


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++|||+++|+|.
T Consensus        91 ~lv~e~~~gg~L~  103 (361)
T 2yab_A           91 VLILELVSGGELF  103 (361)
T ss_dssp             EEEEECCCSCBHH
T ss_pred             EEEEEcCCCCcHH
Confidence            9999999999874

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.80  E-value=1.2e-18  Score=97.39  Aligned_cols=88  Identities=13%  Similarity=0.181  Sum_probs=78.5

Q ss_pred             CcceeeceecCc--CeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           2 VNTKITKSFPLG--KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g--~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      .+|++.+.||+|  +||.||++.+..++..+|+|.+............+.+|+.+++.++ ||||+++++.+...+..++
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCCCcEeEEEEECCEEEE
Confidence            478999999999  9999999999999999999999876544444566888999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++|+|.
T Consensus       104 v~e~~~~~~L~  114 (389)
T 3gni_B          104 VTSFMAYGSAK  114 (389)
T ss_dssp             EEECCTTCBHH
T ss_pred             EEEccCCCCHH
Confidence            99999998874

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.80  E-value=1.2e-18  Score=96.49  Aligned_cols=90  Identities=20%  Similarity=0.292  Sum_probs=77.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||++.+..++..+|+|.+.+.... ......+.+|..++..+.+||||+++++++.+....++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            36899999999999999999999989999999999865432 23345578899999888558999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        88 v~e~~~gg~L~   98 (345)
T 3a8x_A           88 VIEYVNGGDLM   98 (345)
T ss_dssp             EECCCCSCBHH
T ss_pred             EEeCCCCCcHH
Confidence            99999999874

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.80  E-value=3.4e-19  Score=98.37  Aligned_cols=89  Identities=24%  Similarity=0.329  Sum_probs=76.8

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||.+.+..++..+|+|.+.+... .......+.+|..+++.+. |||++++++.+...+..++
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~l   82 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCC-CCcCcceEEEEEeCCEEEE
Confidence            4789999999999999999999998999999999976421 1122456788999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        83 v~E~~~gg~L~   93 (337)
T 1o6l_A           83 VMEYANGGELF   93 (337)
T ss_dssp             EEECCTTCBHH
T ss_pred             EEeCCCCCcHH
Confidence            99999999874

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.79  E-value=1.1e-18  Score=94.33  Aligned_cols=86  Identities=24%  Similarity=0.401  Sum_probs=76.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|++.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++ |||++++++.+......+++
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv   79 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCC-CCCEeeEEeEEEeCCEEEEE
Confidence            68999999999999999999999999999999999866544444566889999999998 89999999999999999999


Q ss_pred             EeccCCC
Q psy8005          81 LELLDLN   87 (91)
Q Consensus        81 ~e~~~~g   87 (91)
                      |||++++
T Consensus        80 ~e~~~~~   86 (292)
T 3o0g_A           80 FEFCDQD   86 (292)
T ss_dssp             EECCSEE
T ss_pred             EecCCCC
Confidence            9999854

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.79  E-value=6.5e-19  Score=96.67  Aligned_cols=88  Identities=17%  Similarity=0.197  Sum_probs=74.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +++|++.+.||+|+||.||++.+..++..+|+|.+...... ...+.+.+|+.+++.++ ||||+++++.+...+..+++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~lv   83 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYLF   83 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEEEE
Confidence            47899999999999999999999989999999998654321 22345888999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus        84 ~e~~~~~~L~   93 (323)
T 3tki_A           84 LEYCSGGELF   93 (323)
T ss_dssp             EECCTTEEGG
T ss_pred             EEcCCCCcHH
Confidence            9999998875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.79  E-value=1e-18  Score=94.61  Aligned_cols=88  Identities=13%  Similarity=0.044  Sum_probs=76.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ..|++.+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+..+..+. ||||+++++.+...+..|++
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRID-KPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCC-CCCcceeeEEEEECCcEEEE
Confidence            4699999999999999999999888999999999865432 233456889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus       110 ~e~~~g~~L~  119 (286)
T 3uqc_A          110 AEWIRGGSLQ  119 (286)
T ss_dssp             EECCCEEEHH
T ss_pred             EEecCCCCHH
Confidence            9999988764

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.79  E-value=5.5e-19  Score=98.07  Aligned_cols=90  Identities=20%  Similarity=0.314  Sum_probs=76.1

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||++.+..++..+|+|.+.+... .......+..|..++..+.+||||+++++++...+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            4689999999999999999999999999999999976432 122244577888899888558999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++|+|.
T Consensus       102 v~E~~~gg~L~  112 (353)
T 3txo_A          102 VMEFVNGGDLM  112 (353)
T ss_dssp             EEECCCSCBHH
T ss_pred             EEeCCCCCcHH
Confidence            99999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.79  E-value=4.2e-19  Score=98.33  Aligned_cols=88  Identities=19%  Similarity=0.358  Sum_probs=75.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc---hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+......   ....+.+.+|+.+++.++ ||||+++++.+...+..+
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEE
Confidence            3588999999999999999999999999999998653211   112456889999999998 899999999999999999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus       103 lv~e~~~g~~L~  114 (351)
T 3c0i_A          103 MVFEFMDGADLC  114 (351)
T ss_dssp             EEEECCSSCBHH
T ss_pred             EEEeCCCCCCHH
Confidence            999999999873

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.79  E-value=1.4e-18  Score=94.58  Aligned_cols=88  Identities=24%  Similarity=0.363  Sum_probs=76.6

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +++|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.+. |||++++++.+...+..+++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCC-CCCccchhheeecCCeEEEE
Confidence            57899999999999999999999988999999998765544444556889999999998 89999999999999999999


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      |||+++++|
T Consensus        81 ~e~~~~~~l   89 (311)
T 4agu_A           81 FEYCDHTVL   89 (311)
T ss_dssp             EECCSEEHH
T ss_pred             EEeCCCchH
Confidence            999998765

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.79  E-value=7.2e-19  Score=98.86  Aligned_cols=90  Identities=20%  Similarity=0.298  Sum_probs=75.3

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||++....++..+|+|.+.+...... ....+..|..++..+.+||||+++++++.+...+++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            3679999999999999999999999999999999986543221 223477888888887558999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++|+|.
T Consensus       131 V~E~~~gg~L~  141 (396)
T 4dc2_A          131 VIEYVNGGDLM  141 (396)
T ss_dssp             EEECCTTCBHH
T ss_pred             EEEcCCCCcHH
Confidence            99999999874

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=1.5e-18  Score=95.22  Aligned_cols=85  Identities=24%  Similarity=0.468  Sum_probs=75.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+....   .....+.+|+.+++.+. ||||+++++.+...+..+++|
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~lv~   80 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIAR-HRNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCC-CCCCCeEeEEEecCCEEEEEE
Confidence            68999999999999999999999999999999986442   22445889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        81 e~~~g~~L~   89 (321)
T 1tki_A           81 EFISGLDIF   89 (321)
T ss_dssp             CCCCCCBHH
T ss_pred             EeCCCCCHH
Confidence            999999874

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.78  E-value=8.5e-19  Score=100.64  Aligned_cols=87  Identities=29%  Similarity=0.391  Sum_probs=71.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|++.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++ ||||+++++++......++|||
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD-HPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEEEe
Confidence            588999999999999999999989999999999765433333456889999999998 8999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++|+|.
T Consensus       117 ~~~~g~L~  124 (494)
T 3lij_A          117 CYKGGELF  124 (494)
T ss_dssp             CCCSCBHH
T ss_pred             cCCCCcHH
Confidence            99999874

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.78  E-value=4.1e-18  Score=91.71  Aligned_cols=88  Identities=22%  Similarity=0.363  Sum_probs=78.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.+++.++ |||++++++.+...+..+++|
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEcCCEEEEEE
Confidence            5799999999999999999999989999999999776544444566889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        85 e~~~~~~l~   93 (284)
T 3kk8_A           85 DLVTGGELF   93 (284)
T ss_dssp             CCCCSCBHH
T ss_pred             ecCCCCCHH
Confidence            999998763

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.78  E-value=2.4e-18  Score=99.00  Aligned_cols=88  Identities=20%  Similarity=0.375  Sum_probs=73.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-----------hHHHHHHHHHHHHHhcCCCCCeeeehee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-----------DLKAEILHEVAVLEACRCNSRIVQLHQV   70 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~i~~l~~~   70 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+.......           ...+.+.+|+.+++.+. ||||++++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~  114 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKLFDV  114 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCC-CTTBCCEEEE
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCC-CCCCCeEEEE
Confidence            46899999999999999999999999999999997653221           22456889999999998 8999999999


Q ss_pred             eeeCCeEEEEEeccCCCCCC
Q psy8005          71 FESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        71 ~~~~~~~~lv~e~~~~g~L~   90 (91)
                      +......++||||+++|+|.
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~  134 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELF  134 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHH
T ss_pred             EEcCCEEEEEEecCCCCcHH
Confidence            99999999999999999874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.78  E-value=2.6e-18  Score=93.32  Aligned_cols=86  Identities=17%  Similarity=0.244  Sum_probs=75.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ..|.+.+.||+|+||.||++.+..++..+|+|.+.......  .+.+.+|+.+++.++ ||||+++++.+...+..+++|
T Consensus        20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~   96 (297)
T 3fxz_A           20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVM   96 (297)
T ss_dssp             GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC--HHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH--HHHHHHHHHHHhcCC-CCCCCeEeEEEEECCEEEEEE
Confidence            46889999999999999999998899999999987543222  456888999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        97 e~~~~~~L~  105 (297)
T 3fxz_A           97 EYLAGGSLT  105 (297)
T ss_dssp             ECCTTCBHH
T ss_pred             ECCCCCCHH
Confidence            999999874

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.78  E-value=8.6e-19  Score=100.42  Aligned_cols=88  Identities=24%  Similarity=0.374  Sum_probs=76.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++ ||||+++++.+......+++|
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCC-CCCcCeEEEEEEcCCEEEEEE
Confidence            4689999999999999999999989999999999754322223556889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       101 e~~~~~~L~  109 (486)
T 3mwu_A          101 ELYTGGELF  109 (486)
T ss_dssp             CCCCSCBHH
T ss_pred             EcCCCCcHH
Confidence            999999874

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.78  E-value=3.1e-18  Score=95.22  Aligned_cols=85  Identities=15%  Similarity=0.263  Sum_probs=75.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+|+|.+......   ...+.+|+.+++.++ ||||+++++.+......+++|
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~   95 (361)
T 3uc3_A           20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---DENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIIM   95 (361)
T ss_dssp             TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---CHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---cHHHHHHHHHHHhCC-CCCCCcEEEEEeeCCEEEEEE
Confidence            5799999999999999999999999999999999764322   345778999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        96 e~~~~~~L~  104 (361)
T 3uc3_A           96 EYASGGELY  104 (361)
T ss_dssp             ECCCSCBHH
T ss_pred             EeCCCCCHH
Confidence            999999874

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.78  E-value=3.4e-18  Score=92.69  Aligned_cols=89  Identities=20%  Similarity=0.371  Sum_probs=71.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch------------------------hHHHHHHHHHHHHHh
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST------------------------DLKAEILHEVAVLEA   57 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~------------------------~~~~~~~~~~~~~~~   57 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.......                        ...+.+.+|+.+++.
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            67999999999999999999999899999999997643211                        012347889999999


Q ss_pred             cCCCCCeeeeheeeee--CCeEEEEEeccCCCCCCC
Q psy8005          58 CRCNSRIVQLHQVFES--SHDMILLLELLDLNHHQA   91 (91)
Q Consensus        58 ~~~~~~i~~l~~~~~~--~~~~~lv~e~~~~g~L~~   91 (91)
                      +. ||||+++++.+..  ....+++|||+++++|.+
T Consensus        93 l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~  127 (298)
T 2zv2_A           93 LD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME  127 (298)
T ss_dssp             CC-CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCC
T ss_pred             CC-CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHH
Confidence            98 8999999999876  567899999999998753

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.77  E-value=4.2e-18  Score=93.54  Aligned_cols=88  Identities=32%  Similarity=0.610  Sum_probs=76.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch----hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+.......    ...+.+.+|+.+++.+. |||++++++.+......
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEE
Confidence            35889999999999999999999899999999997654321    12456889999999998 89999999999999999


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++|||+++++|.
T Consensus        90 ~lv~e~~~~~~L~  102 (326)
T 2y0a_A           90 ILILELVAGGELF  102 (326)
T ss_dssp             EEEEECCCSCBHH
T ss_pred             EEEEEcCCCCCHH
Confidence            9999999999874

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.77  E-value=5e-18  Score=91.28  Aligned_cols=89  Identities=18%  Similarity=0.226  Sum_probs=76.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+............+.+++..+..+.+||||+++++.+...+..+++|
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            36889999999999999999999889999999998654434445568889999999844899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        91 e~~~~~~L~   99 (289)
T 1x8b_A           91 EYCNGGSLA   99 (289)
T ss_dssp             ECCTTCBHH
T ss_pred             EecCCCcHH
Confidence            999999874

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.77  E-value=1.1e-18  Score=95.72  Aligned_cols=89  Identities=18%  Similarity=0.338  Sum_probs=76.2

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|++.+.||+|+||.||.+.+..++..+|+|.+.+.... ....+.+.+|..++..+. ||||+++++.+.+....++
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~l   83 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFM   83 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCC-CCCCceEeEEEEeCCEEEE
Confidence            46899999999999999999999989999999999764221 122445778999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        84 v~e~~~gg~L~   94 (318)
T 1fot_A           84 IMDYIEGGELF   94 (318)
T ss_dssp             EECCCCSCBHH
T ss_pred             EEeCCCCCCHH
Confidence            99999999874

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.77  E-value=2e-18  Score=95.62  Aligned_cols=90  Identities=17%  Similarity=0.198  Sum_probs=75.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||++.+..++..+|+|.+.+.... ......+..|..++..+.+|||++++++.+.+....++
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l   95 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   95 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence            46899999999999999999999989999999999764211 12234577788888877448999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        96 v~E~~~gg~L~  106 (345)
T 1xjd_A           96 VMEYLNGGDLM  106 (345)
T ss_dssp             EEECCTTCBHH
T ss_pred             EEeCCCCCcHH
Confidence            99999999874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.77  E-value=5.2e-18  Score=91.99  Aligned_cols=88  Identities=19%  Similarity=0.121  Sum_probs=76.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|++.+.||+|+||.||++.+...+..+++|.+...... ......+.+|+..+..++ |||++++++.+...+..+++
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS-HQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC-BTTBCCEEEEEECSSEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCC-CCCCceEEEeeeeCCeEEEE
Confidence            4699999999999999999999989999999998654332 233456889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus        90 ~e~~~g~~L~   99 (294)
T 4eqm_A           90 MEYIEGPTLS   99 (294)
T ss_dssp             EECCCSCBHH
T ss_pred             EeCCCCCCHH
Confidence            9999999874

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.77  E-value=2.6e-18  Score=93.98  Aligned_cols=70  Identities=17%  Similarity=0.300  Sum_probs=58.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~   73 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+..... ....+.+.+|+.+++.++ ||||+++++.+..
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~   75 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLE-HPGIVRYFNAWLE   75 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST-TTHHHHHHHHHHHHTSCC-CTTBCCEEEEEEE
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc-hhHHHHHHHHHHHHHhCC-CCCEeeEEEEEEE
Confidence            578999999999999999999998999999999975432 233567899999999998 8999999988744

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.77  E-value=7.4e-18  Score=91.79  Aligned_cols=86  Identities=13%  Similarity=0.197  Sum_probs=75.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+....  ......+.+|+.+++.++ ||||+++++.+......+++|
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~   86 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD--EETQRTFLKEVKVMRCLE-HPNVLKFIGVLYKDKRLNFIT   86 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC--HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCC-CcCcccEEEEEecCCeeEEEE
Confidence            57899999999999999999999899999999885432  333556899999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        87 e~~~~~~L~   95 (310)
T 3s95_A           87 EYIKGGTLR   95 (310)
T ss_dssp             ECCTTCBHH
T ss_pred             EecCCCcHH
Confidence            999998874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.77  E-value=9.7e-19  Score=98.02  Aligned_cols=89  Identities=17%  Similarity=0.346  Sum_probs=76.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||.+.+..++..+|+|.+..... .......+.+|+.+++.++ ||||+++++.+.+....++
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~l   92 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFM   92 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEEE
Confidence            3689999999999999999999999999999999975431 1122456888999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        93 v~e~~~gg~L~  103 (384)
T 4fr4_A           93 VVDLLLGGDLR  103 (384)
T ss_dssp             EECCCTTEEHH
T ss_pred             EEecCCCCcHH
Confidence            99999998874

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.77  E-value=5.6e-18  Score=92.50  Aligned_cols=86  Identities=22%  Similarity=0.331  Sum_probs=74.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++..  .+..+|+|.+............+.+|+.+++.++ |||++++++.+...+..+++|
T Consensus        37 ~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 3p86_A           37 CDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR-HPNIVLFMGAVTQPPNLSIVT  113 (309)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSTTCCEEEE
T ss_pred             hHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCceEEEE
Confidence            5788999999999999999976  4778999999766544444566889999999998 899999999999888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       114 e~~~~~~L~  122 (309)
T 3p86_A          114 EYLSRGSLY  122 (309)
T ss_dssp             ECCTTCBHH
T ss_pred             ecCCCCcHH
Confidence            999999874

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.77  E-value=4.8e-19  Score=99.94  Aligned_cols=88  Identities=18%  Similarity=0.252  Sum_probs=74.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.+.... ......+.+|..++..++ ||||+++++.+.+...+++|
T Consensus        69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~lV  147 (410)
T 3v8s_A           69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLYMV  147 (410)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEEE
Confidence            5789999999999999999999999999999999753211 111223778999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       148 ~E~~~gg~L~  157 (410)
T 3v8s_A          148 MEYMPGGDLV  157 (410)
T ss_dssp             ECCCTTEEHH
T ss_pred             EeCCCCCcHH
Confidence            9999999874

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.76  E-value=3.5e-18  Score=93.85  Aligned_cols=88  Identities=22%  Similarity=0.323  Sum_probs=76.9

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +++|++.+.||+|+||.||++.+..++..+++|.+............+.+|+.+++.+. |||++++++.+...+..+++
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCC-CCCEeeEEEEeecCCEEEEE
Confidence            46899999999999999999999988999999998765544444556889999999998 89999999999999999999


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      |||+++++|
T Consensus       103 ~e~~~~~~l  111 (331)
T 4aaa_A          103 FEFVDHTIL  111 (331)
T ss_dssp             EECCSEEHH
T ss_pred             EecCCcchH
Confidence            999987654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.76  E-value=2.4e-18  Score=95.37  Aligned_cols=89  Identities=19%  Similarity=0.316  Sum_probs=76.3

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||.+.+..++..+|+|.+.+.... ......+.+|+.+++.++ ||||+++++.+.+....++
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEE
Confidence            36799999999999999999999989999999999754321 122456788999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus       119 v~e~~~gg~L~  129 (350)
T 1rdq_E          119 VMEYVAGGEMF  129 (350)
T ss_dssp             EEECCTTCBHH
T ss_pred             EEcCCCCCcHH
Confidence            99999999874

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.76  E-value=7.2e-18  Score=90.57  Aligned_cols=88  Identities=15%  Similarity=0.228  Sum_probs=76.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee--eCCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE--SSHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~--~~~~~~l   79 (91)
                      ++|++.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.+++.++ |||++++++.+.  .....++
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEEGGGTEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcC-CCCCCeEEEEEecCCCceEEE
Confidence            6899999999999999999999988999999999866544444567899999999998 899999998764  4568999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++++|.
T Consensus        85 v~e~~~~~~L~   95 (279)
T 2w5a_A           85 VMEYCEGGDLA   95 (279)
T ss_dssp             EEECCTTEEHH
T ss_pred             EEeCCCCCCHH
Confidence            99999998764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.76  E-value=3.7e-18  Score=94.01  Aligned_cols=88  Identities=20%  Similarity=0.296  Sum_probs=75.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC---chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR---STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+|+|.+.....   .....+.+.+|+.+++.++ ||||+++++.+...+..+
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC-CCCcceeehhhccCCeEE
Confidence            368899999999999999999998999999999875421   1223456889999999998 899999999999999999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +||||+++|+|.
T Consensus       105 lv~e~~~gg~L~  116 (345)
T 3hko_A          105 LVMELCHGGHLL  116 (345)
T ss_dssp             EEEECCCSCBHH
T ss_pred             EEEeCCCCCcHH
Confidence            999999999874

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.76  E-value=7.5e-19  Score=97.14  Aligned_cols=83  Identities=18%  Similarity=0.401  Sum_probs=71.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.+....      ..+|+.++..+.+||||+++++.+......+++|
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            4688999999999999999999999999999999765321      3357777777755899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        96 E~~~gg~L~  104 (342)
T 2qr7_A           96 ELMKGGELL  104 (342)
T ss_dssp             CCCCSCBHH
T ss_pred             eCCCCCcHH
Confidence            999999874

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.76  E-value=2e-18  Score=95.84  Aligned_cols=90  Identities=18%  Similarity=0.225  Sum_probs=76.0

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||.+.+..++..+|+|.+.+... .......+..|..++..+.+||+++++++.+...+..|+
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            4689999999999999999999988889999999976432 112244577888888887568999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        99 v~E~~~gg~L~  109 (353)
T 2i0e_A           99 VMEYVNGGDLM  109 (353)
T ss_dssp             EEECCCSCBHH
T ss_pred             EEeCCCCCcHH
Confidence            99999999874

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.76  E-value=2.2e-18  Score=97.31  Aligned_cols=88  Identities=22%  Similarity=0.218  Sum_probs=74.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||.+....++..+|+|.+.+.... ......+.+|..++..+. ||||+++++.+.+.+.+|+|
T Consensus        61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~lV  139 (412)
T 2vd5_A           61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD-RRWITQLHFAFQDENYLYLV  139 (412)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEEEE
T ss_pred             hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeCCEEEEE
Confidence            5789999999999999999999989999999999754221 111234778899999988 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       140 mE~~~gg~L~  149 (412)
T 2vd5_A          140 MEYYVGGDLL  149 (412)
T ss_dssp             ECCCCSCBHH
T ss_pred             EcCCCCCcHH
Confidence            9999999874

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.76  E-value=2e-18  Score=98.08  Aligned_cols=88  Identities=19%  Similarity=0.208  Sum_probs=74.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++....++..+|+|.+.+..... .....+.+|..++..+. ||||+++++.+.....+++|
T Consensus        74 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~lV  152 (437)
T 4aw2_A           74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD-SKWITTLHYAFQDDNNLYLV  152 (437)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCEEEEE
Confidence            57899999999999999999999889999999997532111 11223778999999987 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       153 ~Ey~~gg~L~  162 (437)
T 4aw2_A          153 MDYYVGGDLL  162 (437)
T ss_dssp             ECCCTTCBHH
T ss_pred             EecCCCCcHH
Confidence            9999999874

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.75  E-value=1.4e-18  Score=99.54  Aligned_cols=88  Identities=19%  Similarity=0.364  Sum_probs=76.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+|.+.+.||+|+||.||.+.+..++..+|+|.+....... .....+.+|+.+++.+. ||||+++++.+......+++
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEE
Confidence            57899999999999999999999899999999997543211 22456889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        95 ~E~~~gg~L~  104 (476)
T 2y94_A           95 MEYVSGGELF  104 (476)
T ss_dssp             EECCSSEEHH
T ss_pred             EeCCCCCcHH
Confidence            9999998774

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.75  E-value=9.8e-18  Score=94.04  Aligned_cols=86  Identities=23%  Similarity=0.455  Sum_probs=75.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+.+.||+|+||.||++.+..++..+++|.+.....  .....+.+|+.++..+. ||||+++++.+......+++|
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~lv~  127 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMVLIL  127 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch--hhHHHHHHHHHHHHhCC-CcCCCeEEEEEEeCCEEEEEE
Confidence            468999999999999999999998999999999875432  22446889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       128 E~~~gg~L~  136 (387)
T 1kob_A          128 EFLSGGELF  136 (387)
T ss_dssp             ECCCCCBHH
T ss_pred             EcCCCCcHH
Confidence            999999874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.75  E-value=1.1e-17  Score=90.24  Aligned_cols=87  Identities=21%  Similarity=0.326  Sum_probs=75.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+.+.||+|+||.||++.+..++..+++|.+...... ...+.+.+|+.+++.++ ||||+++++.+......+++|
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-VPMEQIEAEIEVLKSLD-HPNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC-SCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc-hhHHHHHHHHHHHHhCC-CchHHhHHHheecCCeEEEEE
Confidence            4688999999999999999999988999999999765422 22456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus       100 e~~~~~~L~  108 (285)
T 3is5_A          100 ETCEGGELL  108 (285)
T ss_dssp             CCCSCCBHH
T ss_pred             EeCCCCcHH
Confidence            999998864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.75  E-value=6.3e-18  Score=92.79  Aligned_cols=87  Identities=44%  Similarity=0.744  Sum_probs=75.2

Q ss_pred             ceee-ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           4 TKIT-KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         4 ~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      |.+. +.||+|+||.||++.+..++..+|+|.+............+.+|+.++..+.+|||++++++.+......+++||
T Consensus        30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e  109 (327)
T 3lm5_A           30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE  109 (327)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence            5555 789999999999999998999999999986544333456788999999999878999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++|+|.
T Consensus       110 ~~~~~~L~  117 (327)
T 3lm5_A          110 YAAGGEIF  117 (327)
T ss_dssp             CCTTEEGG
T ss_pred             ecCCCcHH
Confidence            99998775

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.75  E-value=3.4e-17  Score=89.29  Aligned_cols=87  Identities=20%  Similarity=0.371  Sum_probs=73.6

Q ss_pred             Ccceee-ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKIT-KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +.|.+. +.||+|+||.||++.+..++..+|+|.+.....  .....+.+|+.++..+.+||||+++++.+...+..+++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv   89 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV   89 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            457774 789999999999999988899999999976532  22456888999998865589999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus        90 ~e~~~~~~L~   99 (316)
T 2ac3_A           90 FEKMRGGSIL   99 (316)
T ss_dssp             EECCTTCBHH
T ss_pred             EEcCCCCcHH
Confidence            9999998874

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.75  E-value=3.9e-18  Score=95.19  Aligned_cols=87  Identities=24%  Similarity=0.319  Sum_probs=75.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||.+....++..+|+|.+.... .......+.+|+.+++.++ ||||+++++.+...+..++||
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCC-CTTBCCEEEEECSSSSCEEEE
T ss_pred             HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEecCCCcEEEE
Confidence            46888999999999999999998889999999987542 2233445889999999998 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       192 e~~~~g~L~  200 (377)
T 3cbl_A          192 ELVQGGDFL  200 (377)
T ss_dssp             ECCTTCBHH
T ss_pred             EcCCCCCHH
Confidence            999999874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.75  E-value=1.7e-17  Score=90.74  Aligned_cols=87  Identities=21%  Similarity=0.222  Sum_probs=73.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC--eEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~--~~~l   79 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+...... ...+.+.+|+.+++.++ |||++++++.+....  ..++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~l   86 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVL   86 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTCCEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcC-CCCcceEEEEeecCCCceEEE
Confidence            4689999999999999999999988999999999754322 12455788999999998 899999999887654  7899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++++|.
T Consensus        87 v~e~~~~~~L~   97 (319)
T 4euu_A           87 IMEFCPCGSLY   97 (319)
T ss_dssp             EEECCTTCBHH
T ss_pred             EEeCCCCCCHH
Confidence            99999998874

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.75  E-value=7.6e-18  Score=96.45  Aligned_cols=88  Identities=23%  Similarity=0.323  Sum_probs=76.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +.|.+.+.||+|+||.||.+.+..++..+|+|.+...... ......+.+|+.+++.++ ||||+++++.+......+++
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEEEE
Confidence            3588999999999999999999989999999999765432 223556889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||++++|+|.
T Consensus       105 ~e~~~~~~L~  114 (484)
T 3nyv_A          105 GEVYTGGELF  114 (484)
T ss_dssp             ECCCCSCBHH
T ss_pred             EecCCCCCHH
Confidence            9999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.74  E-value=1.8e-17  Score=90.72  Aligned_cols=88  Identities=31%  Similarity=0.581  Sum_probs=76.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch----hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+.......    ...+.+.+|+.+++.+. |||++++++.+......
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCEE
Confidence            36889999999999999999999889999999997654321    12456889999999998 89999999999999999


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++|||+++++|.
T Consensus        91 ~lv~e~~~~~~L~  103 (321)
T 2a2a_A           91 VLILELVSGGELF  103 (321)
T ss_dssp             EEEECCCCSCBHH
T ss_pred             EEEEEcCCCCcHH
Confidence            9999999998874

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.74  E-value=1.9e-17  Score=92.31  Aligned_cols=88  Identities=11%  Similarity=0.181  Sum_probs=73.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||++.+..       .+..+|+|.+..... ......+.+|+.+++.+.+||||+++++.+...
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB-HHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC-HHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            468899999999999999998642       345799999975532 333456899999999994489999999999988


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      +..++||||+++|+|.
T Consensus       160 ~~~~lv~e~~~~g~L~  175 (370)
T 2psq_A          160 GPLYVIVEYASKGNLR  175 (370)
T ss_dssp             SSCEEEEECCTTCBHH
T ss_pred             CCEEEEEEcCCCCCHH
Confidence            9999999999999874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.74  E-value=9.7e-18  Score=90.61  Aligned_cols=84  Identities=23%  Similarity=0.428  Sum_probs=72.1

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+.+.||+|+||.||++.+ ..+..+|+|.+............+.+|+.+++.+. ||||+++++.+...+..+++
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv   78 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV   78 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred             CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcC-CCCEeeeeeEEccCCeEEEE
Confidence            68999999999999999999988 56889999998755432223456788999999998 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      ||++++
T Consensus        79 ~e~~~~   84 (288)
T 1ob3_A           79 FEHLDQ   84 (288)
T ss_dssp             EECCSE
T ss_pred             EEecCC
Confidence            999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.74  E-value=1.7e-17  Score=90.64  Aligned_cols=84  Identities=21%  Similarity=0.360  Sum_probs=69.6

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +++|++.+.||+|+||.||++.+. .+..+|+|.+............+.+|+.+++.++ ||||+++++.+......+++
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv   97 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELH-HPNIVSLIDVIHSERCLTLV   97 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCC-CTTBCCEEEEECCSSCEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcC-CCCEeeeeeEEccCCEEEEE
Confidence            468999999999999999999885 4889999999765433333456889999999998 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      |||+++
T Consensus        98 ~e~~~~  103 (311)
T 3niz_A           98 FEFMEK  103 (311)
T ss_dssp             EECCSE
T ss_pred             EcCCCC
Confidence            999985

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.74  E-value=4.7e-17  Score=88.61  Aligned_cols=88  Identities=19%  Similarity=0.308  Sum_probs=74.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+|++.+.||+|+||.||++.+..++..+++|.+..... .......+.+|+.+++.+. |||++++++.+...+..+++
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCcEEEE
Confidence            578999999999999999999988899999999976432 2334556889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||++++++|.
T Consensus       111 ~e~~~~~~L~  120 (310)
T 2wqm_A          111 LELADAGDLS  120 (310)
T ss_dssp             EECCCSCBHH
T ss_pred             EecCCCCCHH
Confidence            9999998763

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.74  E-value=1.3e-17  Score=95.96  Aligned_cols=85  Identities=20%  Similarity=0.275  Sum_probs=74.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+...+..+|+|.+......   .+.+.+|+.+++.+. ||||+++++.+......++||
T Consensus       220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~  295 (495)
T 1opk_A          220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIT  295 (495)
T ss_dssp             GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC---HHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEE
T ss_pred             HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc---hHHHHHHHHHHHhcC-CCCEeeEEEEEecCCcEEEEE
Confidence            3578889999999999999999888899999999765332   456899999999998 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       296 E~~~~g~L~  304 (495)
T 1opk_A          296 EFMTYGNLL  304 (495)
T ss_dssp             ECCTTCBHH
T ss_pred             EccCCCCHH
Confidence            999999874

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.74  E-value=4.2e-17  Score=88.28  Aligned_cols=90  Identities=22%  Similarity=0.378  Sum_probs=76.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-------hhHHHHHHHHHHHHHhcCCCCCeeeeheeeee
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-------TDLKAEILHEVAVLEACRCNSRIVQLHQVFES   73 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~   73 (91)
                      .++|.+.+.||+|+||.||++.+..++..+++|.+......       ....+.+.+|+.+++.+.+|||++++++.+..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            36899999999999999999999988999999999764311       12234578899999999668999999999999


Q ss_pred             CCeEEEEEeccCCCCCC
Q psy8005          74 SHDMILLLELLDLNHHQ   90 (91)
Q Consensus        74 ~~~~~lv~e~~~~g~L~   90 (91)
                      ....+++||++++++|.
T Consensus        96 ~~~~~lv~e~~~~~~L~  112 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELF  112 (298)
T ss_dssp             SSEEEEEEECCTTCBHH
T ss_pred             CCeEEEEEeccCCCcHH
Confidence            99999999999998874

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.74  E-value=2.3e-17  Score=88.46  Aligned_cols=87  Identities=17%  Similarity=0.197  Sum_probs=75.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||.+.+..++..+++|.+..... ....+.+.+|+.+++.+. |||++++++.+...+..++++
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcC-CCCceeeeeEEEcCCEEEEEE
Confidence            578999999999999999999988899999999975432 223456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        85 e~~~~~~L~   93 (276)
T 2yex_A           85 EYCSGGELF   93 (276)
T ss_dssp             ECCTTEEGG
T ss_pred             EecCCCcHH
Confidence            999998875

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.74  E-value=1.8e-17  Score=89.49  Aligned_cols=88  Identities=24%  Similarity=0.374  Sum_probs=76.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+++|.+............+.+|+.+++.+. |||++++++.+......++++
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcc-CCCccEEEEEEeCCCeEEEEE
Confidence            3688999999999999999999888999999999765433333566889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus       101 e~~~~~~L~  109 (287)
T 2wei_A          101 ELYTGGELF  109 (287)
T ss_dssp             CCCCSCBHH
T ss_pred             EccCCCCHH
Confidence            999998763

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.74  E-value=2.9e-17  Score=88.20  Aligned_cols=86  Identities=17%  Similarity=0.254  Sum_probs=75.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+.......  .+.+.+|+.+++.++ |||++++++.+......+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~--~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLD-HPNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC--HHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch--HHHHHHHHHHHHhCC-CCCEeeEEEEEecCCeEEEEE
Confidence            36889999999999999999999889999999987653322  456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        86 e~~~~~~L~   94 (277)
T 3f3z_A           86 ELCTGGELF   94 (277)
T ss_dssp             ECCCSCBHH
T ss_pred             eccCCCcHH
Confidence            999998873

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.74  E-value=1.1e-17  Score=91.86  Aligned_cols=85  Identities=19%  Similarity=0.321  Sum_probs=70.7

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +++|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.+. ||||+++++.+......+++
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ-HRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcC-CCCcceEEEEEecCCEEEEE
Confidence            36899999999999999999999999999999999765433333445778999999998 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      |||+++
T Consensus       112 ~e~~~~  117 (329)
T 3gbz_A          112 FEYAEN  117 (329)
T ss_dssp             EECCSE
T ss_pred             EecCCC
Confidence            999985

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.74  E-value=7.2e-18  Score=90.10  Aligned_cols=86  Identities=12%  Similarity=0.124  Sum_probs=73.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--CeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~~~~l   79 (91)
                      ++|.+.+.||+|+||.||++.+.  +..+++|.+..........+.+.+|+.+++.++ ||||+++++.+...  ...++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~l   86 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS-HPNVLPVLGACQSPPAPHPTL   86 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCS-CTTEECEEEEECTTTSSSCEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcC-CCchhheEEEEccCCCCCeEe
Confidence            67899999999999999999874  788999999876544444566899999999998 89999999998776  67899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        87 v~e~~~~~~L~   97 (271)
T 3kmu_A           87 ITHWMPYGSLY   97 (271)
T ss_dssp             EEECCTTCBHH
T ss_pred             eecccCCCcHH
Confidence            99999998874

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.74  E-value=8.2e-18  Score=98.15  Aligned_cols=88  Identities=26%  Similarity=0.372  Sum_probs=75.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+|+|.+.+.... ......+.+|+.++..++ ||||+++++.+.+.+..++|
T Consensus       184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcC-CCCEeeEEEEEeeCCEEEEE
Confidence            4688999999999999999999989999999999764321 112345788999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       263 mEy~~gg~L~  272 (576)
T 2acx_A          263 LTLMNGGDLK  272 (576)
T ss_dssp             ECCCCSCBHH
T ss_pred             EEcCCCCcHH
Confidence            9999999874

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.73  E-value=2.4e-17  Score=90.54  Aligned_cols=83  Identities=27%  Similarity=0.524  Sum_probs=71.5

Q ss_pred             cceee---ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           3 NTKIT---KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         3 ~~~~~---~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +|.+.   +.||+|+||.||++.+..++..+|+|.+....     .....+|+.++..+.+||||+++++.+......++
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~l   83 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM-----EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFL   83 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG-----HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhh-----hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEE
Confidence            45543   78999999999999999899999999996542     34577899999998778999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        84 v~e~~~~~~L~   94 (325)
T 3kn6_A           84 VMELLNGGELF   94 (325)
T ss_dssp             EECCCCSCBHH
T ss_pred             EEEccCCCcHH
Confidence            99999999874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.73  E-value=2.1e-17  Score=90.75  Aligned_cols=87  Identities=18%  Similarity=0.229  Sum_probs=73.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc---EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|.+.+.||+|+||.||.+.+..++.   .+|+|.+..... ......+.+|+.+++.++ ||||+++++.+......+
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~  126 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT-ERQRRDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAM  126 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC-HHHHHHHHHHHHHHTTCC-CTTBCCEEEEECGGGCCE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC-HHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCccE
Confidence            468889999999999999999875544   599999975432 333556899999999998 899999999999888999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus       127 lv~e~~~~~~L~  138 (325)
T 3kul_A          127 IVTEYMENGSLD  138 (325)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEeeCCCCCcHH
Confidence            999999998874

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.73  E-value=1.4e-17  Score=92.21  Aligned_cols=84  Identities=25%  Similarity=0.392  Sum_probs=68.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+.....    .+.+.+|+.++..+. ||||+++++.+......+++|
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD----KKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchh----HHHHHHHHHHHHhCC-CCCCcceeeeEecCCeEEEEE
Confidence            358889999999999999999988899999999975431    345778999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus       128 e~~~~~~L~  136 (349)
T 2w4o_A          128 ELVTGGELF  136 (349)
T ss_dssp             CCCCSCBHH
T ss_pred             EeCCCCCHH
Confidence            999998874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.73  E-value=6.5e-18  Score=90.85  Aligned_cols=89  Identities=21%  Similarity=0.318  Sum_probs=75.7

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||.+.+..++..+++|.+....... .....+.+|+.+++.++ |||++++++.+......++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCC-CCCCcchhheEecCCEEEE
Confidence            468999999999999999999999889999999986543211 12345888999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++++|.
T Consensus        87 v~e~~~~~~l~   97 (279)
T 3fdn_A           87 ILEYAPLGTVY   97 (279)
T ss_dssp             EECCCTTEEHH
T ss_pred             EEecCCCCcHH
Confidence            99999988763

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.73  E-value=4e-17  Score=87.83  Aligned_cols=88  Identities=35%  Similarity=0.643  Sum_probs=76.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch----hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+.......    ...+.+.+|+.+++.+. |||++++++.+......
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC-CCCeeehhheecCCCeE
Confidence            46899999999999999999999889999999997653321    12556889999999998 89999999999999999


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++||++++++|.
T Consensus        84 ~lv~e~~~~~~L~   96 (283)
T 3bhy_A           84 VLILELVSGGELF   96 (283)
T ss_dssp             EEEEECCCSCBHH
T ss_pred             EEEEeecCCCcHH
Confidence            9999999998874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.73  E-value=2.6e-17  Score=91.26  Aligned_cols=87  Identities=18%  Similarity=0.295  Sum_probs=76.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+.+++.++ ||||+++++.+...+..+++|
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~  110 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICM  110 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCC-CCCEEEEeEEEEECCEEEEEE
Confidence            57899999999999999999999889999999997653 2334556889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus       111 e~~~~~~L~  119 (360)
T 3eqc_A          111 EHMDGGSLD  119 (360)
T ss_dssp             CCCTTCBHH
T ss_pred             ECCCCCCHH
Confidence            999998874

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.73  E-value=1.1e-17  Score=92.59  Aligned_cols=88  Identities=14%  Similarity=0.222  Sum_probs=72.1

Q ss_pred             CcceeeceecCcCeeEEEEEE-----EccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-
Q psy8005           2 VNTKITKSFPLGKYATVRRCR-----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~-----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-   75 (91)
                      ++|.+.+.||+|+||.||++.     ...++..+|+|.+..... ......+.+|+.++..+.+||||+++++.+...+ 
T Consensus        22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~  100 (359)
T 3vhe_A           22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  100 (359)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC-HHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence            578999999999999999998     444567899999975432 2234568999999999966899999999887654 


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++|+|.
T Consensus       101 ~~~iv~e~~~~g~L~  115 (359)
T 3vhe_A          101 PLMVIVEFCKFGNLS  115 (359)
T ss_dssp             CCEEEEECCTTEEHH
T ss_pred             ceEEEEEecCCCcHH
Confidence            589999999998874

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.73  E-value=1.5e-17  Score=92.60  Aligned_cols=87  Identities=20%  Similarity=0.188  Sum_probs=71.5

Q ss_pred             CcceeeceecCcCeeEEEEEEE-----ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++..     ...+..+|+|.+..... ......+.+|+.++..++ ||||+++++.+.....
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~  148 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLP  148 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC-hhhHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCC
Confidence            4688899999999999999984     44567899999865432 223445888999999998 8999999999998888


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++||||+++|+|.
T Consensus       149 ~~lv~e~~~~g~L~  162 (367)
T 3l9p_A          149 RFILLELMAGGDLK  162 (367)
T ss_dssp             CEEEEECCTTEEHH
T ss_pred             CEEEEEeCCCCCHH
Confidence            99999999998874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.73  E-value=3e-17  Score=92.79  Aligned_cols=87  Identities=18%  Similarity=0.337  Sum_probs=71.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch------hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST------DLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~   75 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.......      .....+.+|+.+++.++ ||||+++++.+. ..
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~-~~  212 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFD-AE  212 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCC-CTTBCCCCEEEE-SS
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCC-CCCEeeEEEEEe-cC
Confidence            46889999999999999999999999999999997643211      11223788999999998 899999999875 45


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++|+|.
T Consensus       213 ~~~lv~e~~~~g~L~  227 (419)
T 3i6u_A          213 DYYIVLELMEGGELF  227 (419)
T ss_dssp             EEEEEEECCTTCBGG
T ss_pred             ceEEEEEcCCCCcHH
Confidence            589999999999885

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.73  E-value=1.4e-17  Score=96.74  Aligned_cols=88  Identities=23%  Similarity=0.283  Sum_probs=75.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+|+|.+.+..... .....+.+|..++..+. ||||+++++.+.....++++
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcC-CCCEeeEEEEEeeCCEEEEE
Confidence            57888999999999999999999899999999997643211 12345788999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       264 mE~~~gg~L~  273 (543)
T 3c4z_A          264 MTIMNGGDIR  273 (543)
T ss_dssp             ECCCTTCBHH
T ss_pred             EEeccCCCHH
Confidence            9999999874

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.73  E-value=6.4e-18  Score=94.41  Aligned_cols=88  Identities=22%  Similarity=0.326  Sum_probs=66.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHH-HHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAV-LEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.+..... .....+..|..+ ++.+. ||||+++++.+...+..|+
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~-hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCC-CTTBCCEEEEEECSSEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEeCCEEEE
Confidence            57999999999999999999999889999999998754322 122335556555 35566 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus       117 v~E~~~gg~L~  127 (373)
T 2r5t_A          117 VLDYINGGELF  127 (373)
T ss_dssp             EEECCCSCBHH
T ss_pred             EEeCCCCCcHH
Confidence            99999999874

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.73  E-value=7.3e-17  Score=87.15  Aligned_cols=87  Identities=18%  Similarity=0.247  Sum_probs=74.1

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCeEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMI   78 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~~~   78 (91)
                      .|.+.+.||+|+||.||++.+..++..+++|.+..........+.+.+|+.+++.++ |||++++++.+..    ....+
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCC-CCCeeeeeeeeccccCCCceEE
Confidence            477888999999999999999988999999999876554445667899999999998 8999999988764    35689


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus       106 lv~e~~~~~~L~  117 (290)
T 1t4h_A          106 LVTELMTSGTLK  117 (290)
T ss_dssp             EEEECCCSCBHH
T ss_pred             EEEEecCCCCHH
Confidence            999999998874

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.73  E-value=6.7e-17  Score=87.44  Aligned_cols=88  Identities=16%  Similarity=0.206  Sum_probs=76.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+|.+.+.||+|+||.||++.+..++..+++|.+...... ....+.+.+|+.+++.+. |+|++++++.+...+..+++
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCEEEEE
Confidence            4688999999999999999999988999999998765432 334556889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||++++++|.
T Consensus        94 ~e~~~~~~L~  103 (294)
T 2rku_A           94 LELCRRRSLL  103 (294)
T ss_dssp             EECCTTCBHH
T ss_pred             EecCCCCCHH
Confidence            9999988763

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.73  E-value=6e-17  Score=89.17  Aligned_cols=88  Identities=16%  Similarity=0.206  Sum_probs=76.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+|.+.+.||+|+||.||++.+..++..+++|.+...... ....+.+.+|+.+++.+. |+||+++++.+...+..+++
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEEEE
Confidence            4688999999999999999999988999999999765432 234556889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus       120 ~e~~~~~~L~  129 (335)
T 2owb_A          120 LELCRRRSLL  129 (335)
T ss_dssp             ECCCTTCBHH
T ss_pred             EecCCCCCHH
Confidence            9999998764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.72  E-value=2.3e-17  Score=90.62  Aligned_cols=88  Identities=24%  Similarity=0.290  Sum_probs=68.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCch--hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRST--DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||.+...   .++..+|+|.+.+.....  .....+.+|+.+++.+. ||||+++++.+...+.
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC-CTTBCCEEEEEECSSC
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC-CCCccceeEEEEcCCE
Confidence            57999999999999999999875   568899999997653211  12345778999999998 8999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        96 ~~lv~e~~~~~~L~  109 (327)
T 3a62_A           96 LYLILEYLSGGELF  109 (327)
T ss_dssp             EEEEEECCTTEEHH
T ss_pred             EEEEEeCCCCCcHH
Confidence            99999999998763

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.72  E-value=2.8e-17  Score=93.97  Aligned_cols=85  Identities=21%  Similarity=0.274  Sum_probs=72.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------C
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------~   75 (91)
                      ++|++.+.||+|+||.||.+.+..++..+|+|.+............+.+|+.+++.++ ||||+++++.+...      .
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTTTCC
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCC-CCCCCcEEEEEccCCccccCC
Confidence            5789999999999999999999999999999999765433444556889999999998 89999999988654      3


Q ss_pred             eEEEEEeccCCC
Q psy8005          76 DMILLLELLDLN   87 (91)
Q Consensus        76 ~~~lv~e~~~~g   87 (91)
                      .+++||||++++
T Consensus       141 ~~~lv~E~~~~~  152 (464)
T 3ttj_A          141 DVYLVMELMDAN  152 (464)
T ss_dssp             EEEEEEECCSEE
T ss_pred             eEEEEEeCCCCC
Confidence            579999999865

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.72  E-value=3e-17  Score=92.16  Aligned_cols=87  Identities=21%  Similarity=0.222  Sum_probs=73.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC--eEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~--~~~l   79 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+...... .....+.+|+.+++.++ ||||+++++.+....  ..++
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~l   86 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVL   86 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTCCEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcC-CCCCCeEEEeeccCCCCeeEE
Confidence            3688999999999999999999988999999999754322 12455788999999998 899999999887654  7899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        87 v~e~~~~g~L~   97 (396)
T 4eut_A           87 IMEFCPCGSLY   97 (396)
T ss_dssp             EECCCTTEEHH
T ss_pred             EEecCCCCCHH
Confidence            99999998764

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.72  E-value=5.3e-17  Score=88.53  Aligned_cols=89  Identities=12%  Similarity=0.148  Sum_probs=76.3

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|++.+.||+|+||.||++.+..++..+++|.+...... ......+.+|+.+++.+. |||++++++.+...+..++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcC-CCCeeEEEEEEeeCCeEEE
Confidence            36799999999999999999999888999999999765332 223456889999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++|++++++|.
T Consensus       112 v~e~~~~~~L~  122 (309)
T 2h34_A          112 DMRLINGVDLA  122 (309)
T ss_dssp             EEECCCCEEHH
T ss_pred             EEEecCCCCHH
Confidence            99999988764

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.72  E-value=4e-17  Score=91.16  Aligned_cols=81  Identities=26%  Similarity=0.506  Sum_probs=66.4

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      .+.||+|+||.||++.+..++..+|+|.+.....  ...+.+.+|+.++..++ ||||+++++.+...+..++||||+++
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~lv~E~~~~  170 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDG  170 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEEEEeCCCC
Confidence            5689999999999999998999999999976532  23456889999999998 89999999999999999999999999


Q ss_pred             CCCC
Q psy8005          87 NHHQ   90 (91)
Q Consensus        87 g~L~   90 (91)
                      ++|.
T Consensus       171 ~~L~  174 (373)
T 2x4f_A          171 GELF  174 (373)
T ss_dssp             CEEH
T ss_pred             CcHH
Confidence            9874

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.72  E-value=7.4e-17  Score=86.35  Aligned_cols=84  Identities=18%  Similarity=0.229  Sum_probs=72.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+. .+..+++|.+......   .+.+.+|+.+++.++ |||++++++.+......+++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   84 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVF   84 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEEEE
T ss_pred             hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCC-CCCEeeEEEEEecCCceEEEE
Confidence            57889999999999999999876 4677999999765432   346889999999998 899999999999888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        85 e~~~~~~L~   93 (269)
T 4hcu_A           85 EFMEHGCLS   93 (269)
T ss_dssp             ECCTTCBHH
T ss_pred             EeCCCCcHH
Confidence            999998764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.72  E-value=3.3e-18  Score=97.19  Aligned_cols=88  Identities=22%  Similarity=0.301  Sum_probs=67.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.+. |||++++++.+...+..++|
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCS-CTTSCCEEEEEEETTEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCC-CCeEeeEEEEEeeCCEEEEE
Confidence            578999999999999999999999999999999975422 1122345778888888888 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       227 ~e~~~~~~L~  236 (446)
T 4ejn_A          227 MEYANGGELF  236 (446)
T ss_dssp             ECCCSSCBHH
T ss_pred             EeeCCCCcHH
Confidence            9999999874

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.72  E-value=4e-17  Score=88.04  Aligned_cols=86  Identities=15%  Similarity=0.242  Sum_probs=73.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC-------cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG-------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||++.+..++       ..+++|.+....  ....+.+.+|+.+++.++ |||++++++.+...
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLS-HKHLVLNYGVCVCG   84 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSC-CTTBCCEEEEECCT
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEeC
Confidence            57899999999999999999887765       469999986543  223566889999999998 89999999999988


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      +..+++|||+++++|.
T Consensus        85 ~~~~lv~e~~~~~~L~  100 (289)
T 4fvq_A           85 DENILVQEFVKFGSLD  100 (289)
T ss_dssp             TCCEEEEECCTTCBHH
T ss_pred             CCCEEEEECCCCCCHH
Confidence            8999999999998874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.72  E-value=4.4e-17  Score=89.64  Aligned_cols=87  Identities=24%  Similarity=0.335  Sum_probs=73.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.+..     ++..+++|.+..... ......+.+|+.+++.++ |||++++++.+...+.
T Consensus        47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~  124 (343)
T 1luf_A           47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFD-NPNIVKLLGVCAVGKP  124 (343)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS
T ss_pred             HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC-HHHHHHHHHHHHHHHhCC-CCCEEEEEEEEccCCc
Confidence            578899999999999999998863     347899999975432 333556899999999998 8999999999998889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus       125 ~~lv~e~~~~~~L~  138 (343)
T 1luf_A          125 MCLLFEYMAYGDLN  138 (343)
T ss_dssp             CEEEEECCTTCBHH
T ss_pred             eEEEEecCCCCcHH
Confidence            99999999998874

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.72  E-value=2.1e-17  Score=88.78  Aligned_cols=89  Identities=22%  Similarity=0.320  Sum_probs=75.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|++.+.||+|+||.||++.+..++..+++|.+...... ....+.+.+|+.+++.+. |||++++++.+...+..++
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBC-CTTBCCEEEEEECSSEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCC-CCCeEeEEEEEccCCeEEE
Confidence            36799999999999999999999888999999999654221 112356888999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++|++++++|.
T Consensus        89 v~e~~~~~~L~   99 (278)
T 3cok_A           89 VLEMCHNGEMN   99 (278)
T ss_dssp             EEECCTTEEHH
T ss_pred             EEecCCCCcHH
Confidence            99999988763

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.72  E-value=4.3e-17  Score=88.28  Aligned_cols=85  Identities=22%  Similarity=0.395  Sum_probs=70.2

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|++.+.||+|+||.||.+.+..++..+++|.+............+.+|+.+++.+. |||++++++.+...+..+++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv   80 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLV   80 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcC-CCCeeeEEEEEecCCceEEE
Confidence            68999999999999999999999988999999998754322222345788999999998 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      ||++++
T Consensus        81 ~e~~~~   86 (299)
T 2r3i_A           81 FEFLHQ   86 (299)
T ss_dssp             EECCSE
T ss_pred             EEcccC
Confidence            999974

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.72  E-value=3.5e-18  Score=94.37  Aligned_cols=86  Identities=19%  Similarity=0.330  Sum_probs=72.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+|.+.+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.+++.++ ||||+++++.+......+++
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEE
Confidence            57999999999999999999999999999999987542211 12345788999999998 89999999999999999999


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      |||+ +|+|
T Consensus        88 ~E~~-~g~l   95 (336)
T 3h4j_B           88 IEYA-GGEL   95 (336)
T ss_dssp             ECCC-CEEH
T ss_pred             EECC-CCcH
Confidence            9999 4554

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.72  E-value=6.3e-17  Score=87.95  Aligned_cols=86  Identities=21%  Similarity=0.335  Sum_probs=72.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+......  ....+.+|+.+++.+. |||++++.+.+......+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   85 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF--RDSSLENEIAVLKKIK-HENIVTLEDIYESTTHYYLVM   85 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHhCC-CCCeeehhhhcccCCEEEEEE
Confidence            3688999999999999999999888999999999754321  1345788999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        86 e~~~~~~L~   94 (304)
T 2jam_A           86 QLVSGGELF   94 (304)
T ss_dssp             CCCCSCBHH
T ss_pred             EcCCCccHH
Confidence            999998874

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.72  E-value=1.9e-17  Score=90.55  Aligned_cols=85  Identities=20%  Similarity=0.335  Sum_probs=59.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.+++.+. ||||+++++.+...+..+++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELK-HENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCC-BTTBCCEEEEECCTTEEEEEE
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcC-CCCcceEEEEEEECCeEEEEE
Confidence            578999999999999999999988899999999975432 122345788999999998 899999999999999999999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      ||+++ +|
T Consensus        83 e~~~~-~L   89 (317)
T 2pmi_A           83 EFMDN-DL   89 (317)
T ss_dssp             ECCCC-BH
T ss_pred             EecCC-CH
Confidence            99984 44

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.72  E-value=2.1e-17  Score=97.87  Aligned_cols=90  Identities=18%  Similarity=0.225  Sum_probs=76.1

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||++.+..++..+|+|.+.+... .....+.+..|..++..+.+|++|+++++.+.+.+.+|+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            4679999999999999999999999999999999976422 112234577888888888668999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++|+|.
T Consensus       420 V~E~~~gg~L~  430 (674)
T 3pfq_A          420 VMEYVNGGDLM  430 (674)
T ss_dssp             EEECCCSCBHH
T ss_pred             EEeCcCCCcHH
Confidence            99999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.72  E-value=1.4e-16  Score=87.26  Aligned_cols=84  Identities=21%  Similarity=0.358  Sum_probs=73.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~l   79 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+....     ...+.+|+.+++.+.+|||++++.+.+..  ....++
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l  110 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  110 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence            47899999999999999999999899999999986432     45688899999999878999999999887  567899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +||++++++|.
T Consensus       111 v~e~~~~~~l~  121 (330)
T 3nsz_A          111 VFEHVNNTDFK  121 (330)
T ss_dssp             EEECCCCCCHH
T ss_pred             EEeccCchhHH
Confidence            99999998763

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.71  E-value=9.9e-17  Score=87.96  Aligned_cols=84  Identities=15%  Similarity=0.292  Sum_probs=72.7

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |...+.||+|+||.||++.+..++..+|+|.+......  ..+.+.+|+.+++.+. |||++++++.+...+..+++|||
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~  123 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVLMEF  123 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--SHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh--HHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEEec
Confidence            56677999999999999999888999999999755322  2456889999999998 89999999999999999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus       124 ~~~~~L~  130 (321)
T 2c30_A          124 LQGGALT  130 (321)
T ss_dssp             CCSCBHH
T ss_pred             CCCCCHH
Confidence            9998864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.71  E-value=4.4e-17  Score=87.85  Aligned_cols=85  Identities=20%  Similarity=0.263  Sum_probs=74.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+.....   ..+.+.+|+.+++.++ |||++++++.+......+++|
T Consensus        13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A           13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST---HHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEEEEE
T ss_pred             cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH---HHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCEEEEE
Confidence            468889999999999999999998899999999875432   2456889999999998 899999999999888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        89 e~~~~~~L~   97 (288)
T 3kfa_A           89 EFMTYGNLL   97 (288)
T ss_dssp             ECCTTEEHH
T ss_pred             EcCCCCcHH
Confidence            999988763

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.71  E-value=8.7e-17  Score=89.99  Aligned_cols=85  Identities=20%  Similarity=0.341  Sum_probs=64.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC--eEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~--~~~l   79 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+|+|.+..............+|+.++..+.+||||+++++.+...+  .+++
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            57999999999999999999999999999999987554334445568889999999987899999999987544  6899


Q ss_pred             EEeccCC
Q psy8005          80 LLELLDL   86 (91)
Q Consensus        80 v~e~~~~   86 (91)
                      ||||+++
T Consensus        89 v~e~~~~   95 (388)
T 3oz6_A           89 VFDYMET   95 (388)
T ss_dssp             EEECCSE
T ss_pred             EecccCc
Confidence            9999974

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.71  E-value=6.7e-17  Score=87.62  Aligned_cols=85  Identities=18%  Similarity=0.320  Sum_probs=71.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|++.+.||+|+||.||.+.+..++..+++|.+.....  .....+.+|+.++..+. |||++++++.+...+..+++|
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCD-HPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCC-CTTBCCEEEEEECC-CEEEEE
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCC-CCCEeeeeeeeeeCCeEEEEE
Confidence            468899999999999999999998899999999875432  22456888999999998 899999999999888999999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      |++++++|
T Consensus        96 e~~~~~~l  103 (302)
T 2j7t_A           96 EFCPGGAV  103 (302)
T ss_dssp             ECCTTEEH
T ss_pred             EeCCCCcH
Confidence            99998876

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.71  E-value=2.3e-17  Score=90.97  Aligned_cols=86  Identities=13%  Similarity=0.276  Sum_probs=73.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh---------------HHHHHHHHHHHHHhcCCCCCeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD---------------LKAEILHEVAVLEACRCNSRIVQ   66 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~i~~   66 (91)
                      ++|.+.+.||+|+||.||.+.+  ++..+|+|.+........               ....+.+|+.++..+. |||+++
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~  107 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK-NEYCLT  107 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC-CTTBCC
T ss_pred             CceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC-CCCcce
Confidence            5789999999999999999988  788999999975422110               1156889999999998 899999


Q ss_pred             eheeeeeCCeEEEEEeccCCCCCC
Q psy8005          67 LHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        67 l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      +++.+...+..+++|||+++++|.
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~  131 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSIL  131 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSS
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHH
Confidence            999999999999999999999885

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.71  E-value=2.2e-17  Score=89.01  Aligned_cols=89  Identities=19%  Similarity=0.312  Sum_probs=75.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||.+.+..++..+++|.+...... ......+.+|+.+++.+. |||++++++.+...+..++
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l   91 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYL   91 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCC-CCCEeeEEEEEEcCCEEEE
Confidence            36899999999999999999999888899999998654221 112345888999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +||++++++|.
T Consensus        92 v~e~~~~~~L~  102 (284)
T 2vgo_A           92 MLEFAPRGELY  102 (284)
T ss_dssp             EECCCTTEEHH
T ss_pred             EEEeCCCCcHH
Confidence            99999988763

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.71  E-value=1.4e-16  Score=86.54  Aligned_cols=87  Identities=15%  Similarity=0.218  Sum_probs=75.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+.+.||+|+||.||++.+..++..+++|.+...... .....+.+|+.+++.+. |||++++++.+......+++|
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEE
Confidence            4588899999999999999999888999999999765432 23456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus       100 e~~~~~~L~  108 (303)
T 3a7i_A          100 EYLGGGSAL  108 (303)
T ss_dssp             ECCTTEEHH
T ss_pred             EeCCCCcHH
Confidence            999988763

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.71  E-value=1.6e-16  Score=88.60  Aligned_cols=85  Identities=20%  Similarity=0.257  Sum_probs=72.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+|+|.+............+.+|+.+++.+. ||||+++++.+....      
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSCCSTTTCC
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcC-CCCccceEEeecccccccccc
Confidence            5789999999999999999999988999999999765433444556889999999998 899999999886554      


Q ss_pred             eEEEEEeccCCC
Q psy8005          76 DMILLLELLDLN   87 (91)
Q Consensus        76 ~~~lv~e~~~~g   87 (91)
                      ..+++|||++++
T Consensus       104 ~~~lv~e~~~~~  115 (371)
T 2xrw_A          104 DVYIVMELMDAN  115 (371)
T ss_dssp             EEEEEEECCSEE
T ss_pred             ceEEEEEcCCCC
Confidence            789999999753

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.71  E-value=1.3e-17  Score=91.01  Aligned_cols=88  Identities=17%  Similarity=0.162  Sum_probs=72.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC----e
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH----D   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~----~   76 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++ ||||+++++.+....    .
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCC-CTTBCCEEEEEEEEETTEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCC-CCCcceEEEeeeccCCCCcc
Confidence            5799999999999999999999889999999999765432 233456888999999998 899999998876544    3


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        91 ~~lv~e~~~g~~L~  104 (311)
T 3ork_A           91 PYIVMEYVDGVTLR  104 (311)
T ss_dssp             EEEEEECCCEEEHH
T ss_pred             cEEEEecCCCCCHH
Confidence            49999999988764

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.71  E-value=9.8e-17  Score=86.06  Aligned_cols=88  Identities=19%  Similarity=0.346  Sum_probs=75.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+...... ......+.+|+..++.+. |||++++++.+......+++
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCeEEEE
Confidence            5789999999999999999999888999999998654211 122446888999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||++++++|.
T Consensus        90 ~e~~~~~~L~   99 (276)
T 2h6d_A           90 MEYVSGGELF   99 (276)
T ss_dssp             EECCCSCBHH
T ss_pred             EeccCCCcHH
Confidence            9999998874

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.70  E-value=3.3e-17  Score=91.44  Aligned_cols=87  Identities=20%  Similarity=0.302  Sum_probs=72.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|.+.+.||+|+||.||++...   ..+..+|+|.+.... .......+.+|+.+++.+. ||||+++++.+......+
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~  122 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM  122 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSSCE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCceE
Confidence            46888999999999999999875   345679999987543 2333556899999999998 899999999999888999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++|+|.
T Consensus       123 lv~e~~~~~sL~  134 (373)
T 2qol_A          123 IVTEYMENGSLD  134 (373)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEEeCCCCCcHH
Confidence            999999998874

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.70  E-value=1.1e-16  Score=88.01  Aligned_cols=88  Identities=13%  Similarity=0.206  Sum_probs=72.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-------cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-------KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||++.+.       ..+..+|+|.+..... ......+.+|+.+++.+.+||||+++++.+...
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            57889999999999999999875       3456899999975432 233456889999999994489999999999988


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      +..+++|||+++|+|.
T Consensus       114 ~~~~lv~e~~~~~~L~  129 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLR  129 (334)
T ss_dssp             SCCEEEEECCTTCBHH
T ss_pred             CceEEEEECCCCCcHH
Confidence            8999999999998874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.70  E-value=1.5e-16  Score=87.35  Aligned_cols=88  Identities=17%  Similarity=0.236  Sum_probs=73.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc-----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT-----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||.+.+...+.     .+++|.+..... ......+.+|+.++..+.+||||+++++.+...+.
T Consensus        46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  124 (333)
T 2i1m_A           46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH-ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP  124 (333)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC-hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence            468889999999999999999866543     799999875432 23355688999999999448999999999998889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus       125 ~~lv~e~~~~g~L~  138 (333)
T 2i1m_A          125 VLVITEYCCYGDLL  138 (333)
T ss_dssp             CEEEEECCTTEEHH
T ss_pred             eEEEEecCCCCcHH
Confidence            99999999998774

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.70  E-value=9.6e-17  Score=87.82  Aligned_cols=85  Identities=20%  Similarity=0.262  Sum_probs=72.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++... .+..+++|.+.....  ...+.+.+|+.+++.+. |||++++++.+...+..+++|
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~  114 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESS--QGIEEFETEIETLSFCR-HPHLVSLIGFCDERNEMILIY  114 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCS--SHHHHHHHHHHGGGSCC-CTTBCCEEEECCCTTCCEEEE
T ss_pred             hccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccCh--HHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEEEEE
Confidence            57888999999999999999854 578999998865432  22456889999999998 899999999999888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       115 e~~~~~~L~  123 (321)
T 2qkw_B          115 KYMENGNLK  123 (321)
T ss_dssp             ECCTTCBTG
T ss_pred             EcCCCCcHH
Confidence            999999885

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.70  E-value=1.3e-16  Score=86.99  Aligned_cols=84  Identities=15%  Similarity=0.317  Sum_probs=69.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+.....    ...+.+|+.++..+. |||++++++.+......+++|
T Consensus        29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~  103 (314)
T 3com_A           29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLWIVM  103 (314)
T ss_dssp             -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEEEe
Confidence            468899999999999999999988899999999975432    345788999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus       104 e~~~~~~L~  112 (314)
T 3com_A          104 EYCGAGSVS  112 (314)
T ss_dssp             ECCTTEEHH
T ss_pred             ecCCCCCHH
Confidence            999988763

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.70  E-value=2.2e-16  Score=86.17  Aligned_cols=85  Identities=25%  Similarity=0.248  Sum_probs=68.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+...............++..+..+..|+|++++.+.+...+..+++|
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            35888999999999999999999889999999986654333334445566666666644899999999999999999999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      |++.+
T Consensus       137 e~~~~  141 (311)
T 3p1a_A          137 ELCGP  141 (311)
T ss_dssp             ECCCC
T ss_pred             eccCC
Confidence            99943

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.70  E-value=8.9e-17  Score=87.99  Aligned_cols=87  Identities=18%  Similarity=0.326  Sum_probs=69.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc------hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS------TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~   75 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+......      ......+.+|+.+++.+. |||++++++.+....
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCC-CTTBCCEEEEEESSS
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCC-CCCCceEeeEEcCCc
Confidence            4688999999999999999999988999999999764321      111234788999999998 899999999886655


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                       .+++|||+++++|.
T Consensus        89 -~~lv~e~~~~~~L~  102 (322)
T 2ycf_A           89 -YYIVLELMEGGELF  102 (322)
T ss_dssp             -EEEEEECCTTEETH
T ss_pred             -eEEEEecCCCCcHH
Confidence             89999999998874

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.70  E-value=1.1e-16  Score=87.12  Aligned_cols=87  Identities=17%  Similarity=0.279  Sum_probs=72.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.+.     ..+..+++|.+..... ....+.+.+|+.+++.++ ||||+++++.+...+.
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS-PSELRDLLSEFNVLKQVN-HPHVIKLYGACSQDGP  100 (314)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSS
T ss_pred             hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCC-CCceeeEEEEEecCCc
Confidence            46888999999999999999873     3347899999975432 333456889999999998 8999999999998889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus       101 ~~lv~e~~~~~~L~  114 (314)
T 2ivs_A          101 LLLIVEYAKYGSLR  114 (314)
T ss_dssp             CEEEEECCTTCBHH
T ss_pred             eEEEEeecCCCCHH
Confidence            99999999998874

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.70  E-value=2.3e-16  Score=89.49  Aligned_cols=84  Identities=20%  Similarity=0.256  Sum_probs=72.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-----Ce
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-----~~   76 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.+. |+||+++++.+...     ..
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK-SDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTTTCCC
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcC-CCCcceEEEEEecCCCCcCCe
Confidence            5799999999999999999999999999999999765433334556889999999998 89999999988765     56


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .|+|||++++
T Consensus       105 ~~lv~e~~~~  114 (432)
T 3n9x_A          105 LYIVLEIADS  114 (432)
T ss_dssp             EEEEEECCSE
T ss_pred             EEEEEecCCc
Confidence            8999999874

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.70  E-value=2.3e-16  Score=84.36  Aligned_cols=84  Identities=13%  Similarity=0.218  Sum_probs=72.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||.+... .+..+|+|.+......   ...+.+|+.++..+. |||++++++.+......+++|
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   82 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIYIVT   82 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC---HHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEEEEE
T ss_pred             hheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc---HHHHHHHHHHHHhCC-CCCEeeEEEEEccCCceEEEE
Confidence            57899999999999999999765 4667999999765432   356889999999998 899999999999888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        83 e~~~~~~L~   91 (268)
T 3sxs_A           83 EYISNGCLL   91 (268)
T ss_dssp             ECCTTCBHH
T ss_pred             EccCCCcHH
Confidence            999998764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.70  E-value=8.2e-17  Score=88.06  Aligned_cols=88  Identities=16%  Similarity=0.265  Sum_probs=64.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc---EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE-
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM-   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-   77 (91)
                      ++|.+.+.||+|+||.||++.+...+.   .+|+|.+..........+.+.+|+.+++.++ |||++++++.+...... 
T Consensus        23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD-HPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCC-CTTBCCCCEEEECC----
T ss_pred             hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCC-CCceehhhceeecccccc
Confidence            468899999999999999998776654   7999999765433444567899999999998 89999999988766554 


Q ss_pred             -----EEEEeccCCCCCC
Q psy8005          78 -----ILLLELLDLNHHQ   90 (91)
Q Consensus        78 -----~lv~e~~~~g~L~   90 (91)
                           ++++||+++|+|.
T Consensus       102 ~~~~~~~v~e~~~~~~L~  119 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLH  119 (323)
T ss_dssp             ---CEEEEEECCTTCBHH
T ss_pred             CCCccEEEEEeccCCcHH
Confidence                 9999999999874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.70  E-value=7.9e-17  Score=88.77  Aligned_cols=88  Identities=18%  Similarity=0.224  Sum_probs=70.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||.+.+.     ..+..+++|.+..... ......+.+|+.++..+..||||+++++.+...+.
T Consensus        45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  123 (344)
T 1rjb_A           45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  123 (344)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence            46888999999999999999863     3455899999975432 22245688999999999448999999999998899


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus       124 ~~lv~e~~~~g~L~  137 (344)
T 1rjb_A          124 IYLIFEYCCYGDLL  137 (344)
T ss_dssp             CEEEEECCTTCBHH
T ss_pred             cEEEEecCCCCcHH
Confidence            99999999998874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.70  E-value=6.6e-17  Score=87.96  Aligned_cols=88  Identities=15%  Similarity=0.167  Sum_probs=73.2

Q ss_pred             CcceeeceecCcCeeEEEEEEE-----ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++..     ..++..+++|.+..... ....+.+.+|+.++..+.+|||++++++.+...+.
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            4788999999999999999985     34567899999975532 23345688999999999448999999999998899


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus       102 ~~lv~e~~~~~~L~  115 (313)
T 1t46_A          102 TLVITEYCCYGDLL  115 (313)
T ss_dssp             CEEEEECCTTEEHH
T ss_pred             cEEEEecCCCCCHH
Confidence            99999999998764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.70  E-value=1.3e-16  Score=90.94  Aligned_cols=84  Identities=19%  Similarity=0.228  Sum_probs=61.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-----CCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-----SHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-----~~~   76 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++ ||||+++++++..     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN-HDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTTTCCC
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCC-CCCCCceEEEEecCCcccCce
Confidence            5689999999999999999999989999999999765433334566889999999998 8999999998843     356


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      +|++||++++
T Consensus       132 ~~lv~e~~~~  141 (458)
T 3rp9_A          132 LYVVLEIADS  141 (458)
T ss_dssp             EEEEECCCSE
T ss_pred             EEEEEecccc
Confidence            8999999853

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.70  E-value=2.2e-16  Score=88.27  Aligned_cols=88  Identities=13%  Similarity=0.166  Sum_probs=72.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-------CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-------GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||++.+...       +..+|+|.+..... ......+.+|+.+++.+.+||||+++++.+...
T Consensus        69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC-HHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            4688899999999999999986532       34799999876532 233456889999999994489999999999998


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      +..+++|||+++|+|.
T Consensus       148 ~~~~lv~e~~~~g~L~  163 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLR  163 (382)
T ss_dssp             SSCEEEEECCTTCBHH
T ss_pred             CceEEEEEecCCCcHH
Confidence            9999999999998874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.70  E-value=2.5e-16  Score=84.82  Aligned_cols=84  Identities=18%  Similarity=0.266  Sum_probs=69.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||.+... .+..+++|.+......   ...+.+|+.++..++ |+|++++++.+......+++|
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   98 (283)
T 3gen_A           24 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIIT   98 (283)
T ss_dssp             GGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEEEE
T ss_pred             HHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCC-CCCEeeEEEEEecCCCeEEEE
Confidence            47889999999999999999765 4668999999765432   346889999999998 899999999999888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        99 e~~~~~~L~  107 (283)
T 3gen_A           99 EYMANGCLL  107 (283)
T ss_dssp             CCCTTCBHH
T ss_pred             eccCCCcHH
Confidence            999998764

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.70  E-value=1.1e-16  Score=87.84  Aligned_cols=88  Identities=19%  Similarity=0.230  Sum_probs=71.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEE--EEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQY--AAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~--~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      ++|.+.+.||+|+||.||++.+..++..+  ++|.+..... ......+.+|+.++..+.+|||++++++.+...+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc-hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            57899999999999999999988877754  8888864322 22234588899999999448999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++++|.
T Consensus       104 v~e~~~~~~L~  114 (327)
T 1fvr_A          104 AIEYAPHGNLL  114 (327)
T ss_dssp             EECCCTTCBHH
T ss_pred             EEecCCCCCHH
Confidence            99999998874

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.70  E-value=3.7e-16  Score=87.01  Aligned_cols=88  Identities=22%  Similarity=0.359  Sum_probs=74.0

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc------hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS------TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      +|.+.+.||+|+||.||++.+..++..+|+|.+......      ....+.+.+|+.++..+.+||||+++.+.+.....
T Consensus        95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  174 (365)
T 2y7j_A           95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF  174 (365)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred             hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence            588889999999999999999888999999998764321      11234578899999998448999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus       175 ~~lv~e~~~g~~L~  188 (365)
T 2y7j_A          175 MFLVFDLMRKGELF  188 (365)
T ss_dssp             EEEEECCCTTCBHH
T ss_pred             EEEEEEeCCCCcHH
Confidence            99999999998874

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.69  E-value=9.7e-17  Score=86.86  Aligned_cols=86  Identities=21%  Similarity=0.372  Sum_probs=71.2

Q ss_pred             CcceeeceecCcCeeEEEEEE----EccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~   75 (91)
                      ++|++.+.||+|+||.||++.    +..++..+|+|.+....  ....+.+.+|+.+++.++ |||++++++.+..  ..
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHHHHHHHHHHHTCC-CTTBCCEEEEECHHHHT
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCC
Confidence            578999999999999999998    45678899999987542  233456889999999998 8999999998754  34


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++++|.
T Consensus        87 ~~~lv~e~~~~~~L~  101 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLR  101 (295)
T ss_dssp             SCEEEEECCTTCBHH
T ss_pred             ceEEEEEeCCCCCHH
Confidence            589999999999874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.69  E-value=1.2e-16  Score=88.97  Aligned_cols=86  Identities=20%  Similarity=0.288  Sum_probs=65.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      +.|.+.+.||+|+||.||.+.+..++..+|+|.+............+.+|+.+++.++ ||||+++++.+....      
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSSTTTCC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC-CcCCCCceeeEecCCccccCc
Confidence            4688999999999999999999999999999999665433344566889999999998 899999999887653      


Q ss_pred             eEEEEEeccCCCCC
Q psy8005          76 DMILLLELLDLNHH   89 (91)
Q Consensus        76 ~~~lv~e~~~~g~L   89 (91)
                      ..+++||++ +++|
T Consensus       104 ~~~lv~e~~-~~~L  116 (367)
T 1cm8_A          104 DFYLVMPFM-GTDL  116 (367)
T ss_dssp             CCEEEEECC-SEEH
T ss_pred             eEEEEEecC-CCCH
Confidence            469999999 5544

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.69  E-value=2.1e-16  Score=85.20  Aligned_cols=86  Identities=17%  Similarity=0.207  Sum_probs=71.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHH-----HHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLK-----AEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+..........     +.+.+|+.+++.++ |||++++++.+.... 
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC-CTTBCCEEEEETTTT-
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC-CCCchhhheeecCCC-
Confidence            57899999999999999999999899999999987543322111     56889999999998 899999999886554 


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                       +++|||+++++|.
T Consensus        97 -~lv~e~~~~~~L~  109 (287)
T 4f0f_A           97 -RMVMEFVPCGDLY  109 (287)
T ss_dssp             -EEEEECCTTCBHH
T ss_pred             -eEEEEecCCCCHH
Confidence             6999999998873

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.69  E-value=3e-16  Score=85.60  Aligned_cols=86  Identities=16%  Similarity=0.175  Sum_probs=70.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee----eCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE----SSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~----~~~~~   77 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+....  ....+.+.+|+.+++.+. |||++++++.+.    .....
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFN-HPNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEEEETTEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcC-CCCeeeEEEEEEeccCCCcee
Confidence            46899999999999999999998889999999986532  233556889999999998 899999999876    33478


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++||+++|+|.
T Consensus       106 ~lv~e~~~~~~L~  118 (317)
T 2buj_A          106 WLLLPFFKRGTLW  118 (317)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             EEEEEeCCCCcHH
Confidence            9999999998874

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.69  E-value=1.2e-16  Score=87.66  Aligned_cols=87  Identities=18%  Similarity=0.203  Sum_probs=68.8

Q ss_pred             CcceeeceecCcCeeEEEEEE-----EccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCR-----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~-----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.     +..++..+++|.+..... ......+.+|+.+++.+. ||||+++++.+.....
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSS
T ss_pred             hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc-hhhHHHHHHHHHHHhhCC-CCCCCeEEEEEcCCCC
Confidence            578999999999999999998     445677899999964432 223446888999999998 8999999999998888


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus       108 ~~lv~e~~~~~~L~  121 (327)
T 2yfx_A          108 RFILMELMAGGDLK  121 (327)
T ss_dssp             CEEEEECCTTEEHH
T ss_pred             cEEEEecCCCCcHH
Confidence            99999999998764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.69  E-value=1.1e-16  Score=87.92  Aligned_cols=84  Identities=18%  Similarity=0.149  Sum_probs=71.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.....    ...+.+|+.+++.+.+|+|++++++.+......+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~   84 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL   84 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence            579999999999999999999988999999999875432    2247789999999945899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+ +++|.
T Consensus        85 e~~-~~~L~   92 (330)
T 2izr_A           85 ELL-GPSLE   92 (330)
T ss_dssp             ECC-CCBHH
T ss_pred             EeC-CCCHH
Confidence            999 77663

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.69  E-value=5.5e-16  Score=85.93  Aligned_cols=83  Identities=19%  Similarity=0.226  Sum_probs=71.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .|...+.||+|+||.||++.+..++..+|+|.+....... ...+.+.+|+.+++.+. |||++++++++...+..++||
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCeEEEEE
Confidence            3778899999999999999998889999999997654322 23456889999999998 899999999999999999999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      ||+++
T Consensus       134 e~~~g  138 (348)
T 1u5q_A          134 EYCLG  138 (348)
T ss_dssp             ECCSE
T ss_pred             ecCCC
Confidence            99974

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.68  E-value=2.8e-16  Score=85.00  Aligned_cols=85  Identities=16%  Similarity=0.255  Sum_probs=71.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--------   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--------   73 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+...   ......+.+|+.+++.+. |||++++++.+..        
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~   81 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLN-HQYVVRYYAAWLERRNFVKPM   81 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEECCCCCC--
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcC-chHHHHHHHHHHhhcchhhhh
Confidence            4689999999999999999999888999999998643   223456889999999998 8999999887643        


Q ss_pred             -----CCeEEEEEeccCCCCCC
Q psy8005          74 -----SHDMILLLELLDLNHHQ   90 (91)
Q Consensus        74 -----~~~~~lv~e~~~~g~L~   90 (91)
                           ....+++||++++++|.
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~  103 (303)
T 1zy4_A           82 TAVKKKSTLFIQMEYCENGTLY  103 (303)
T ss_dssp             ----CEEEEEEEEECCCSCBHH
T ss_pred             cccccCCceEEEEecCCCCCHH
Confidence                 45789999999998874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.68  E-value=2.4e-16  Score=87.17  Aligned_cols=84  Identities=17%  Similarity=0.317  Sum_probs=70.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--------   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--------   73 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++ |||++++++.+..        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEEC-------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhcc-CCCcccHhheeeccccccccC
Confidence            5799999999999999999999989999999998765433333446778999999998 8999999998876        


Q ss_pred             CCeEEEEEeccCC
Q psy8005          74 SHDMILLLELLDL   86 (91)
Q Consensus        74 ~~~~~lv~e~~~~   86 (91)
                      .+..++||||+++
T Consensus        96 ~~~~~lv~e~~~~  108 (351)
T 3mi9_A           96 KGSIYLVFDFCEH  108 (351)
T ss_dssp             -CEEEEEEECCSE
T ss_pred             CceEEEEEeccCC
Confidence            3468999999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.68  E-value=2.7e-16  Score=89.60  Aligned_cols=82  Identities=21%  Similarity=0.301  Sum_probs=69.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-eEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-DMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++...  +..+|+|.+....    ..+.+.+|+.+++.++ |||++++++.+.... ..+++
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~iv  265 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIV  265 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCC-CTTBCCEEEEEECTTSCEEEE
T ss_pred             HHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhcc-CCCEEEEEEEEEcCCCceEEE
Confidence            56888999999999999999864  6789999997543    2456889999999998 899999999876554 79999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       266 ~e~~~~g~L~  275 (450)
T 1k9a_A          266 TEYMAKGSLV  275 (450)
T ss_dssp             EECCTTCBHH
T ss_pred             EEecCCCcHH
Confidence            9999999874

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.68  E-value=2.9e-16  Score=85.13  Aligned_cols=87  Identities=21%  Similarity=0.341  Sum_probs=69.4

Q ss_pred             CcceeeceecCcCeeEEEEEE----EccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC--C
Q psy8005           2 VNTKITKSFPLGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~--~   75 (91)
                      ..|++.+.||+|+||.||.+.    +..++..+|+|.+..... ......+.+|+.+++.+. |||++++++.+...  .
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~   98 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGN   98 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCC-CTTBCCEEEEEEC---C
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCc
Confidence            357889999999999999998    456788999999975432 222456889999999998 89999999988765  5


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++++|.
T Consensus        99 ~~~lv~e~~~~~~L~  113 (302)
T 4e5w_A           99 GIKLIMEFLPSGSLK  113 (302)
T ss_dssp             CEEEEEECCTTCBHH
T ss_pred             eEEEEEEeCCCCcHH
Confidence            689999999998874

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.68  E-value=4.3e-16  Score=86.87  Aligned_cols=87  Identities=21%  Similarity=0.263  Sum_probs=68.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------C
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------~   75 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.+. ||||+++++.+...      .
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecCCccccCC
Confidence            4789999999999999999999999999999999764433334556889999999998 89999999987643      5


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..++++|++ +++|.
T Consensus       108 ~~~lv~e~~-~~~L~  121 (367)
T 2fst_X          108 DVYLVTHLM-GADLN  121 (367)
T ss_dssp             CCEEEEECC-CEECC
T ss_pred             eEEEEeccc-CCCHH
Confidence            679999998 45553

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.68  E-value=4.3e-16  Score=85.26  Aligned_cols=86  Identities=19%  Similarity=0.234  Sum_probs=72.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee------CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~------~~   75 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+......   ...+.+|+..++.+.+|||++++++.+..      ..
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~  100 (326)
T 2x7f_A           24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD  100 (326)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST---THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred             CcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc---HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence            4688999999999999999999888999999998754322   34578899999998558999999998876      46


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++++|.
T Consensus       101 ~~~lv~e~~~~~~L~  115 (326)
T 2x7f_A          101 QLWLVMEFCGAGSVT  115 (326)
T ss_dssp             EEEEEEECCTTEEHH
T ss_pred             eEEEEEEcCCCCcHH
Confidence            789999999998763

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.68  E-value=1e-16  Score=90.25  Aligned_cols=82  Identities=21%  Similarity=0.289  Sum_probs=66.4

Q ss_pred             Ccceee-ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCe
Q psy8005           2 VNTKIT-KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHD   76 (91)
Q Consensus         2 ~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~   76 (91)
                      ++|.+. +.||+|+||.||.+.+..++..+|+|.+...       ....+|+.++..+.+||||+++++.+..    ...
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence            456665 6899999999999999999999999998632       2355677777555558999999998765    567


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      +++||||+++|+|.
T Consensus       134 ~~lv~E~~~gg~L~  147 (400)
T 1nxk_A          134 LLIVMECLDGGELF  147 (400)
T ss_dssp             EEEEEECCCSEEHH
T ss_pred             EEEEEEeCCCCcHH
Confidence            89999999998874

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.68  E-value=5.1e-16  Score=87.14  Aligned_cols=85  Identities=16%  Similarity=0.173  Sum_probs=71.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC-CCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-NSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +|.+.+.||+|+||.||++.+.. +..+|+|.+............+.+|+.++..+.+ |+||+++++++...+.++++|
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            48899999999999999998765 8899999997665444445678999999999974 699999999999899999999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      | +.+++|
T Consensus       136 E-~~~~~L  142 (390)
T 2zmd_A          136 E-CGNIDL  142 (390)
T ss_dssp             E-CCSEEH
T ss_pred             e-cCCCCH
Confidence            9 556555

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.68  E-value=2.4e-16  Score=84.37  Aligned_cols=87  Identities=15%  Similarity=0.220  Sum_probs=67.9

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch--hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST--DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      .++|.+.+.||+|+||.||++.+.  +..+++|.+.......  ...+.+.+|+.+++.++ |||++++++.+...+..+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~   82 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLC   82 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCC-CTTBCCEEEEECCC--CE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC-CCCEeeEEEEEecCCceE
Confidence            368999999999999999999864  7889999987543221  22356888999999998 899999999999888999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus        83 lv~e~~~~~~L~   94 (271)
T 3dtc_A           83 LVMEFARGGPLN   94 (271)
T ss_dssp             EEEECCTTEEHH
T ss_pred             EEEEcCCCCCHH
Confidence            999999988763

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.67  E-value=2.2e-16  Score=86.28  Aligned_cols=87  Identities=16%  Similarity=0.284  Sum_probs=72.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.+.     ..+..+++|.+..... ......+.+|+.+++.+. |||++++++.+...+.
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~  102 (322)
T 1p4o_A           25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFN-CHHVVRLLGVVSQGQP  102 (322)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCC-CTTBCCEEEEECSSSS
T ss_pred             hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC-HHHHHHHHHHHHHHHhcC-CCCEeeeEEEEccCCc
Confidence            46888999999999999999775     3467899999875432 223456889999999998 8999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++||++++|+|.
T Consensus       103 ~~lv~e~~~~~~L~  116 (322)
T 1p4o_A          103 TLVIMELMTRGDLK  116 (322)
T ss_dssp             CEEEEECCTTCBHH
T ss_pred             cEEEEEeCCCCcHH
Confidence            99999999998874

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.67  E-value=4.7e-16  Score=83.05  Aligned_cols=84  Identities=18%  Similarity=0.216  Sum_probs=72.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||.+.+. .+..+++|.+......   .+.+.+|+.+++.++ |||++++++.+...+..+++|
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   82 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVT   82 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSCEEEE
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCeEEEE
Confidence            57899999999999999999875 5678999999765432   356889999999998 899999999998888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        83 e~~~~~~L~   91 (267)
T 3t9t_A           83 EFMEHGCLS   91 (267)
T ss_dssp             CCCTTCBHH
T ss_pred             eCCCCCcHH
Confidence            999998874

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.67  E-value=3.2e-17  Score=89.92  Aligned_cols=84  Identities=24%  Similarity=0.365  Sum_probs=69.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+.+.||+|+||.||++.+..++..+|+|.+...... .....+.+|+.+++.+. |||++++++.+...+..+++
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv   78 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLV   78 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCC-CTTBCCEEEEEECSSCEEEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcC-CCCCCeeeeEEeeCCEEEEE
Confidence            68999999999999999999999988999999998654321 11113456889999998 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      |||+++
T Consensus        79 ~e~~~~   84 (324)
T 3mtl_A           79 FEYLDK   84 (324)
T ss_dssp             EECCSE
T ss_pred             eccccc
Confidence            999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.67  E-value=4.3e-16  Score=84.19  Aligned_cols=84  Identities=18%  Similarity=0.192  Sum_probs=70.3

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |.....||+|+||.||++.+..++..+++|.+.....  ...+.+.+|+.+++.+. |||++++++.+...+..+++||+
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS--RYSQPLHEEIALHKHLK-HKNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-----HHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch--HHHHHHHHHHHHHHhCC-CCCEeeEeeEEEeCCcEEEEEEe
Confidence            3344589999999999999998899999999876532  22456889999999998 89999999999999999999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus       101 ~~~~~L~  107 (295)
T 2clq_A          101 VPGGSLS  107 (295)
T ss_dssp             CSEEEHH
T ss_pred             CCCCCHH
Confidence            9988763

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.67  E-value=2.5e-16  Score=93.34  Aligned_cols=87  Identities=17%  Similarity=0.189  Sum_probs=72.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe----
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD----   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~----   76 (91)
                      ++|.+.+.||+|+||.||++.+.. ++..+++|.+..... ......+.+|+.++..+. ||||+++++++...+.    
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGD-AEAQAMAMAERQFLAEVV-HPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCC-HHHHHHHHHHHGGGGGCC-CTTBCCEEEEEEEECTTSCE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCC-HHHHHHHHHHHHHHHhcC-CCCcCeEeeeEeecCCCCCc
Confidence            478999999999999999999876 678999998865432 233456889999999998 8999999998876554    


Q ss_pred             -EEEEEeccCCCCCC
Q psy8005          77 -MILLLELLDLNHHQ   90 (91)
Q Consensus        77 -~~lv~e~~~~g~L~   90 (91)
                       .|+||||+++++|.
T Consensus       158 ~~~lv~E~~~g~~L~  172 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLK  172 (681)
T ss_dssp             EEEEEEECCCCEECC
T ss_pred             eeEEEEEeCCCCcHH
Confidence             79999999999885

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.67  E-value=6.7e-16  Score=83.26  Aligned_cols=84  Identities=18%  Similarity=0.201  Sum_probs=66.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+............+..+...++.+. |||++++++.+...+..+++|
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD-CPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSSEEEEE
T ss_pred             HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCC-CCeEEEEeeeeeccCCEEEEE
Confidence            5799999999999999999999989999999999765332222223444444566666 899999999999888999999


Q ss_pred             eccCC
Q psy8005          82 ELLDL   86 (91)
Q Consensus        82 e~~~~   86 (91)
                      ||+++
T Consensus        86 e~~~~   90 (290)
T 3fme_A           86 ELMDT   90 (290)
T ss_dssp             ECCSE
T ss_pred             ehhcc
Confidence            99975

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.67  E-value=4.2e-17  Score=88.35  Aligned_cols=87  Identities=17%  Similarity=0.240  Sum_probs=58.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||.+.+..++..+++|.+..... ......+.+|+..+..+. |||++++++.+...+..+++|
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCH-HPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCC-CTTBCCEEEEEESSSCEEEEE
T ss_pred             hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcC-CCCEeeEEEEEeecCCcEEEe
Confidence            579999999999999999999888889999999865432 122345778888888888 899999999999889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        93 e~~~~~~L~  101 (303)
T 2vwi_A           93 KLLSGGSVL  101 (303)
T ss_dssp             ECCTTCBHH
T ss_pred             hhccCCchH
Confidence            999998764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.67  E-value=6e-17  Score=89.31  Aligned_cols=87  Identities=17%  Similarity=0.301  Sum_probs=72.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh------HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD------LKAEILHEVAVLEACRCNSRIVQLHQVFESSH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~   75 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+........      ....+.+|+.+++.+. ||||+++++.+...+
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIKVLDIFENQG  102 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC-CTTBCCEEEEEECSS
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC-CCCEeeEEEEEeeCC
Confidence            368899999999999999999999999999999976542211      2234677999999998 899999999999999


Q ss_pred             eEEEEEeccCCC-CC
Q psy8005          76 DMILLLELLDLN-HH   89 (91)
Q Consensus        76 ~~~lv~e~~~~g-~L   89 (91)
                      ..+++||++.+| +|
T Consensus       103 ~~~lv~e~~~~g~~l  117 (335)
T 3dls_A          103 FFQLVMEKHGSGLDL  117 (335)
T ss_dssp             EEEEEEECCTTSCBH
T ss_pred             EEEEEEEeCCCCccH
Confidence            999999998776 54

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.67  E-value=5.9e-16  Score=85.67  Aligned_cols=86  Identities=17%  Similarity=0.285  Sum_probs=71.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe-----
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-----   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~-----   76 (91)
                      .+|.+.+.||+|+||.||.+.+..++..+|+|.+............+.+|+.+++.++ |||++++++.+.....     
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSGGGCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcC-CCCcccHhheEecccccccce
Confidence            4688999999999999999999989999999999765443444556889999999998 8999999998876543     


Q ss_pred             -EEEEEeccCCCCC
Q psy8005          77 -MILLLELLDLNHH   89 (91)
Q Consensus        77 -~~lv~e~~~~g~L   89 (91)
                       .+++||++++ +|
T Consensus       103 ~~~lv~e~~~~-~l  115 (353)
T 3coi_A          103 DFYLVMPFMQT-DL  115 (353)
T ss_dssp             CCEEEEECCSE-EG
T ss_pred             eEEEEeccccC-CH
Confidence             4999999974 44

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=4.8e-17  Score=90.24  Aligned_cols=89  Identities=26%  Similarity=0.332  Sum_probs=72.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCc--hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++...   .++..+|+|.+......  ......+.+|+.++..+.+||||+++++.+.....
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            57999999999999999999884   46789999998754221  11123466788888888558999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus       134 ~~lv~e~~~~~~L~  147 (355)
T 1vzo_A          134 LHLILDYINGGELF  147 (355)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEeecCCCCCHH
Confidence            99999999999874

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.67  E-value=9.7e-16  Score=85.42  Aligned_cols=84  Identities=18%  Similarity=0.302  Sum_probs=71.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE----
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM----   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~----   77 (91)
                      .+|.+.+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++ |||++++++.+......    
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSSTTCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcC-CCCchhhhhheeccCCcccce
Confidence            4688899999999999999999999999999999765444444566889999999998 89999999998776654    


Q ss_pred             --EEEEeccCC
Q psy8005          78 --ILLLELLDL   86 (91)
Q Consensus        78 --~lv~e~~~~   86 (91)
                        +++|||+++
T Consensus       121 ~~~lv~e~~~~  131 (371)
T 4exu_A          121 DFYLVMPFMQT  131 (371)
T ss_dssp             CCEEEEECCCE
T ss_pred             eEEEEEccccc
Confidence              999999874

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.67  E-value=1.1e-15  Score=84.77  Aligned_cols=85  Identities=22%  Similarity=0.274  Sum_probs=71.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcC----CCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR----CNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+...   .........|..++..+.    +||||+++++.+...+..
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~  111 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM  111 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred             CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence            5789999999999999999999888999999998643   222445677888888886    379999999999999999


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++||++ +++|.
T Consensus       112 ~lv~e~~-~~~L~  123 (360)
T 3llt_A          112 CLIFEPL-GPSLY  123 (360)
T ss_dssp             EEEECCC-CCBHH
T ss_pred             EEEEcCC-CCCHH
Confidence            9999999 77653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.67  E-value=9.1e-16  Score=84.16  Aligned_cols=86  Identities=22%  Similarity=0.337  Sum_probs=71.5

Q ss_pred             CcceeeceecCcCeeEEEEEE----EccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee--eCC
Q psy8005           2 VNTKITKSFPLGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE--SSH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~--~~~   75 (91)
                      ++|++.+.||+|+||.||++.    +...+..+++|.+....  ....+.+.+|+.+++.+. |+|++++++.+.  ...
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~   99 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALH-SDFIVKYRGVSYGPGRQ   99 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSSC
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcC-CCceeEEEEEEecCCCc
Confidence            578999999999999999998    45667899999987543  233456889999999998 899999998775  455


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++++|.
T Consensus       100 ~~~lv~e~~~~~~L~  114 (327)
T 3lxl_A          100 SLRLVMEYLPSGCLR  114 (327)
T ss_dssp             EEEEEEECCTTCBHH
T ss_pred             eEEEEEeecCCCCHH
Confidence            789999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.66  E-value=4e-16  Score=85.55  Aligned_cols=83  Identities=13%  Similarity=0.131  Sum_probs=67.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC----eE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH----DM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~----~~   77 (91)
                      ++|++.+.||+|+||.||++...  +..+|+|.+....   ........|+.++..++ ||||+++++.+....    ..
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~   97 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMK-HENILQFIGAEKRGTSVDVDL   97 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG---HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSEEE
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc---hHHHHHHHHHHHHhcCC-CCCchhhcceeccCCCCCceE
Confidence            57899999999999999999765  6889999986542   22334556888888888 899999999987643    47


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++|||+++|+|.
T Consensus        98 ~lv~e~~~~g~L~  110 (322)
T 3soc_A           98 WLITAFHEKGSLS  110 (322)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             EEEEecCCCCCHH
Confidence            9999999999874

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.66  E-value=8.7e-18  Score=92.46  Aligned_cols=87  Identities=15%  Similarity=0.158  Sum_probs=64.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc------hhHHHHHHHHHHHHHhcC--------CCCCeeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS------TDLKAEILHEVAVLEACR--------CNSRIVQL   67 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~~~~~~~~~~--------~~~~i~~l   67 (91)
                      ++|.+.+.||+|+||.||++.+  ++..+|+|.+......      ....+.+.+|+.+++.+.        .|+|++++
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            4688899999999999999987  5789999999865321      122356788888888875        35555555


Q ss_pred             he-----------------eeee-------------CCeEEEEEeccCCCCCC
Q psy8005          68 HQ-----------------VFES-------------SHDMILLLELLDLNHHQ   90 (91)
Q Consensus        68 ~~-----------------~~~~-------------~~~~~lv~e~~~~g~L~   90 (91)
                      .+                 .+..             ....++||||+++|++.
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll  150 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDL  150 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEET
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccH
Confidence            44                 4333             67899999999998654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.66  E-value=4.5e-16  Score=84.15  Aligned_cols=87  Identities=22%  Similarity=0.345  Sum_probs=68.2

Q ss_pred             Ccceeec-eecCcCeeEEEEEEE--ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITK-SFPLGKYATVRRCRD--RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~-~ig~g~~~~v~~~~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      .+|.+.+ .||+|+||.||++..  ...+..+++|.+..........+.+.+|+.+++.+. |||++++++.+ ..+..+
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC-CTTBCCEEEEE-ESSSEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEE-CCCCcE
Confidence            3577777 999999999999954  445678999999765433344567899999999998 89999999988 556789


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++||++++++|.
T Consensus        94 lv~e~~~~~~L~  105 (291)
T 1xbb_A           94 LVMEMAELGPLN  105 (291)
T ss_dssp             EEEECCTTEEHH
T ss_pred             EEEEeCCCCCHH
Confidence            999999988763

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.66  E-value=6.8e-16  Score=88.00  Aligned_cols=83  Identities=18%  Similarity=0.287  Sum_probs=70.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++... .+..+|+|.+.....   ..+.+.+|+.+++.++ |||++++++.+. ....+++|
T Consensus       188 ~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~-h~~iv~l~~~~~-~~~~~lv~  261 (454)
T 1qcf_A          188 ESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQ-HDKLVKLHAVVT-KEPIYIIT  261 (454)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSCEEEE
T ss_pred             HHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc---cHHHHHHHHHHHhhCC-CCCEeeEEEEEe-CCccEEEE
Confidence            46788999999999999999875 367899999976432   2567899999999998 899999998875 56789999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       262 e~~~~g~L~  270 (454)
T 1qcf_A          262 EFMAKGSLL  270 (454)
T ss_dssp             CCCTTCBHH
T ss_pred             eecCCCcHH
Confidence            999999874

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.66  E-value=3.4e-16  Score=85.28  Aligned_cols=88  Identities=14%  Similarity=0.207  Sum_probs=71.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-   75 (91)
                      ++|.+.+.||+|+||.||++.+.     .++..+++|.+..... ......+.+|+.++..+.+|||++++++.+...+ 
T Consensus        27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  105 (316)
T 2xir_A           27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  105 (316)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence            47889999999999999999853     3457899999976532 2334568899999999966899999999876544 


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++++|.
T Consensus       106 ~~~lv~e~~~~~~L~  120 (316)
T 2xir_A          106 PLMVIVEFCKFGNLS  120 (316)
T ss_dssp             CCEEEEECCTTEEHH
T ss_pred             ceEEEEEcCCCCcHH
Confidence            589999999998764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=7.4e-16  Score=84.82  Aligned_cols=87  Identities=15%  Similarity=0.238  Sum_probs=70.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC----cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|.+.+.||+|+||.||++.....+    ..+++|.+..... ......+.+|+.+++.+. |||++++++.+...+..
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~  121 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKYKPM  121 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC-HHHHHHHHHHHHHHHhCC-CCCCCcEEEEEecCCCc
Confidence            46778899999999999999876443    3599999875432 233456889999999998 89999999999988899


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++||++++++|.
T Consensus       122 ~lv~e~~~~~~L~  134 (333)
T 1mqb_A          122 MIITEYMENGALD  134 (333)
T ss_dssp             EEEEECCTTEEHH
T ss_pred             EEEEeCCCCCcHH
Confidence            9999999998763

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.65  E-value=1e-15  Score=83.44  Aligned_cols=88  Identities=15%  Similarity=0.201  Sum_probs=67.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc---CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC---
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH---   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~---   75 (91)
                      ++|.+.+.||+|+||.||++....   ++..+++|.+............+.+|+.+++.+. |||++++++.+....   
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS-HPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEC-----
T ss_pred             HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCC-CCCeeeeeEEEeeccccC
Confidence            468889999999999999997654   3458999999765444444566889999999998 899999999886544   


Q ss_pred             --eEEEEEeccCCCCCC
Q psy8005          76 --DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 --~~~lv~e~~~~g~L~   90 (91)
                        ..++++||+++++|.
T Consensus       113 ~~~~~~v~e~~~~~~L~  129 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLH  129 (313)
T ss_dssp             --CEEEEEECCTTCBHH
T ss_pred             CcccEEEEecccCCCHH
Confidence              359999999998863

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.65  E-value=1e-15  Score=87.28  Aligned_cols=83  Identities=19%  Similarity=0.224  Sum_probs=69.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.... +..+|+|.+......   .+.+.+|+.+++.++ |||++++++.+.. ...+++|
T Consensus       184 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-hp~iv~~~~~~~~-~~~~iv~  257 (452)
T 1fmk_A          184 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVT  257 (452)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSC---HHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEEEE
T ss_pred             hHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCC---HHHHHHHHHHHHhCC-CCCEeeEEEEEcC-CceEEEe
Confidence            467888999999999999998764 467999999765422   456899999999998 8999999998765 6689999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       258 e~~~~gsL~  266 (452)
T 1fmk_A          258 EYMSKGSLL  266 (452)
T ss_dssp             CCCTTCBHH
T ss_pred             hhhcCCCHH
Confidence            999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.65  E-value=5.8e-16  Score=83.24  Aligned_cols=82  Identities=17%  Similarity=0.301  Sum_probs=69.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--------   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--------   73 (91)
                      .+|.+.+.||+|+||.||++.+..++..+++|.+....      ..+.+|+.+++.+. |||++++.+.+..        
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~   83 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLD-HVNIVHYNGCWDGFDYDPETS   83 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCC-CTTBCCEEEEEEEEEEC----
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCC-CCCEEEEeeeEeccccCcccc
Confidence            36889999999999999999998889999999987542      24567899999998 8999999887754        


Q ss_pred             --------CCeEEEEEeccCCCCCC
Q psy8005          74 --------SHDMILLLELLDLNHHQ   90 (91)
Q Consensus        74 --------~~~~~lv~e~~~~g~L~   90 (91)
                              ....+++|||+++++|.
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~~~~L~  108 (284)
T 2a19_B           84 SKNSSRSKTKCLFIQMEFCDKGTLE  108 (284)
T ss_dssp             -----CCEEEEEEEEECCCCSCBHH
T ss_pred             cccccccCcceEEEEEeccCCCCHH
Confidence                    44589999999998874

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.65  E-value=4.5e-16  Score=84.48  Aligned_cols=85  Identities=22%  Similarity=0.332  Sum_probs=69.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc--hhHHHHHHHHHHHHHhcCCCCCeeeeheee--eeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVF--ESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~--~~~~~~   77 (91)
                      .+|.+.+.||+|+||.||.+.+..++..+++|.+......  ......+.+|+.+++.++ |||++++++.+  ......
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECC---CE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcC-CCCeeEEEEEEEcCCCCeE
Confidence            6799999999999999999999888999999999754321  123456889999999998 89999999987  345578


Q ss_pred             EEEEeccCCC
Q psy8005          78 ILLLELLDLN   87 (91)
Q Consensus        78 ~lv~e~~~~g   87 (91)
                      +++|||++++
T Consensus        84 ~lv~e~~~~~   93 (305)
T 2wtk_C           84 YMVMEYCVCG   93 (305)
T ss_dssp             EEEEECCSEE
T ss_pred             EEEehhccCC
Confidence            9999999876

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.65  E-value=1e-15  Score=83.10  Aligned_cols=82  Identities=21%  Similarity=0.289  Sum_probs=67.2

Q ss_pred             Ccceee-ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCe
Q psy8005           2 VNTKIT-KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHD   76 (91)
Q Consensus         2 ~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~   76 (91)
                      ++|.+. +.||+|+||.||.+.+..++..+|+|.+...       ....+|+..+....+|||++++++.+..    ...
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            567776 7899999999999999989999999998642       2355677777555458999999998876    667


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++++|.
T Consensus        90 ~~lv~e~~~~~~L~  103 (299)
T 3m2w_A           90 LLIVMECLDGGELF  103 (299)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEeecCCCcHH
Confidence            89999999998874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.65  E-value=1.7e-15  Score=83.05  Aligned_cols=83  Identities=19%  Similarity=0.261  Sum_probs=66.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHH-HHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVA-VLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+..... ......+..+.. +++.+. ||||+++++.+...+..+++
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~-h~niv~~~~~~~~~~~~~lv   99 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSD-CPYIVQFYGALFREGDCWIC   99 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCC-CCcEeeeeeEEEeCCceEEE
Confidence            578899999999999999999988899999999976532 222334555555 555565 89999999999999999999


Q ss_pred             EeccCC
Q psy8005          81 LELLDL   86 (91)
Q Consensus        81 ~e~~~~   86 (91)
                      |||+++
T Consensus       100 ~e~~~~  105 (327)
T 3aln_A          100 MELMST  105 (327)
T ss_dssp             ECCCSE
T ss_pred             EeecCC
Confidence            999986

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.64  E-value=5.5e-16  Score=86.17  Aligned_cols=84  Identities=14%  Similarity=0.148  Sum_probs=67.0

Q ss_pred             CcceeeceecCcCeeEEEEEE-----EccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC--CCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCR-----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC--NSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~-----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||++.     +...+..+|+|.+....     ...+..+..++..+..  |+|++++++.+...
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            458888999999999999994     56678899999986543     3346667777766653  69999999999989


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      +..++||||+++|+|.
T Consensus       140 ~~~~lv~e~~~~g~L~  155 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLL  155 (365)
T ss_dssp             SCEEEEECCCCSCBHH
T ss_pred             CCcEEEEeccCCCcHH
Confidence            9999999999999874

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.64  E-value=1.4e-15  Score=83.40  Aligned_cols=86  Identities=21%  Similarity=0.355  Sum_probs=70.0

Q ss_pred             CcceeeceecCcCeeEEEEEEE----ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC--
Q psy8005           2 VNTKITKSFPLGKYATVRRCRD----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~--   75 (91)
                      .+|++.+.||+|+||.||++..    ..++..+++|.+....  ....+.+.+|+.+++.++ |||++++.+.+...+  
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~  117 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRR  117 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCC-CTTBCCEEEEECC----
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEecCCC
Confidence            3588999999999999999983    4567899999987643  233456889999999998 899999998876543  


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++||++++++|.
T Consensus       118 ~~~lv~e~~~~~~L~  132 (326)
T 2w1i_A          118 NLKLIMEYLPYGSLR  132 (326)
T ss_dssp             CCEEEECCCTTCBHH
T ss_pred             ceEEEEECCCCCCHH
Confidence            689999999998874

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.64  E-value=3e-15  Score=82.66  Aligned_cols=86  Identities=15%  Similarity=0.155  Sum_probs=71.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~~~~~lv   80 (91)
                      ..|.+.+.||+|+||.||++.+. .+..+|+|.+............+.+|+.++..+.+| +|++++++.+......+++
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            46899999999999999999874 578899999976554444456688999999999843 9999999999999999999


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      || +.+++|
T Consensus        88 ~e-~~~~~L   95 (343)
T 3dbq_A           88 ME-CGNIDL   95 (343)
T ss_dssp             EC-CCSEEH
T ss_pred             Ee-CCCCCH
Confidence            99 455554

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.64  E-value=2.2e-16  Score=86.49  Aligned_cols=86  Identities=16%  Similarity=0.208  Sum_probs=69.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.+....... ....+.+|+.++..+. |||++++++.+......+++|
T Consensus        30 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~  106 (326)
T 3uim_A           30 DNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQG-GELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVY  106 (326)
T ss_dssp             TSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC------CCCHHHHHHHGGGTCC-CTTBCCCCEEECCSSCCEEEE
T ss_pred             hccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCch-HHHHHHHHHHHHHhcc-CCCccceEEEEecCCceEEEE
Confidence            5788999999999999999974 457889999987543211 1224788999999998 899999999999888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       107 e~~~~~~L~  115 (326)
T 3uim_A          107 PYMANGSVA  115 (326)
T ss_dssp             ECCTTCBHH
T ss_pred             EeccCCCHH
Confidence            999998864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.63  E-value=1.4e-15  Score=88.20  Aligned_cols=83  Identities=19%  Similarity=0.224  Sum_probs=69.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+.. +..+|+|.+......   .+.+.+|+.+++.++ |+||+++++.+.. ...++||
T Consensus       267 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-hpniv~~~~~~~~-~~~~lv~  340 (535)
T 2h8h_A          267 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVT  340 (535)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSC---HHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEEEE
T ss_pred             hhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCC---HHHHHHHHHHHHhCC-CCCEeeEEEEEee-ccceEee
Confidence            467888999999999999998764 467999999765422   456899999999998 8999999998765 6689999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       341 e~~~~gsL~  349 (535)
T 2h8h_A          341 EYMSKGSLL  349 (535)
T ss_dssp             CCCTTEEHH
T ss_pred             ehhcCCcHH
Confidence            999998874

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.63  E-value=1.8e-15  Score=81.46  Aligned_cols=86  Identities=15%  Similarity=0.239  Sum_probs=69.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC---CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|++.+.||+|+||.||++.+...   +..+++|.+..... ....+.+.+|+..++.++ |||++++++.+. .+..+
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~~   91 (281)
T 1mp8_A           15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFD-HPHIVKLIGVIT-ENPVW   91 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-SSSCE
T ss_pred             HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHHhCC-CCccceEEEEEc-cCccE
Confidence            4688999999999999999988653   44689998865432 333556889999999998 899999999874 55689


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus        92 lv~e~~~~~~L~  103 (281)
T 1mp8_A           92 IIMELCTLGELR  103 (281)
T ss_dssp             EEEECCTTEEHH
T ss_pred             EEEecCCCCCHH
Confidence            999999988763

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.63  E-value=4.9e-15  Score=80.78  Aligned_cols=83  Identities=23%  Similarity=0.281  Sum_probs=60.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+............+..+..+++.+. ||||+++++.+...+..+++|
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHD-CPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTT-CTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcC-CCceeeEEEEEecCCcEEEEE
Confidence            5788899999999999999999888999999999765432222233444444566666 899999999999999999999


Q ss_pred             eccC
Q psy8005          82 ELLD   85 (91)
Q Consensus        82 e~~~   85 (91)
                      |++.
T Consensus       104 e~~~  107 (318)
T 2dyl_A          104 ELMG  107 (318)
T ss_dssp             CCCS
T ss_pred             eccC
Confidence            9983

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.63  E-value=2.4e-15  Score=81.40  Aligned_cols=84  Identities=15%  Similarity=0.177  Sum_probs=72.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.....    ...+.+|+..+..+.+|++++++.+.+......+++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            468999999999999999999988899999999865432    2346778889999966899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++ +++|.
T Consensus        86 e~~-~~~L~   93 (298)
T 1csn_A           86 DLL-GPSLE   93 (298)
T ss_dssp             ECC-CCBHH
T ss_pred             Eec-CCCHH
Confidence            999 77763

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.63  E-value=2.1e-15  Score=82.49  Aligned_cols=85  Identities=16%  Similarity=0.250  Sum_probs=68.8

Q ss_pred             ceeeceecCcCeeEEEEEEE----ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeE
Q psy8005           4 TKITKSFPLGKYATVRRCRD----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDM   77 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~   77 (91)
                      |++.+.||+|+||.||.+..    ..++..+|+|.+..... ......+.+|+.+++.+. |||++++++.+..  ....
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~  110 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG-PQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDAGAASL  110 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTTTEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC-hHHHHHHHHHHHHHHhCC-CcchhhEEEEEecCCCceE
Confidence            48899999999999987753    34677899999976532 233556899999999999 8999999999876  3578


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++|||+++++|.
T Consensus       111 ~lv~e~~~~~~L~  123 (318)
T 3lxp_A          111 QLVMEYVPLGSLR  123 (318)
T ss_dssp             EEEECCCTTCBHH
T ss_pred             EEEEecccCCcHH
Confidence            9999999998874

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.63  E-value=1.6e-15  Score=82.72  Aligned_cols=80  Identities=15%  Similarity=0.202  Sum_probs=67.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++...  +..+++|.+....    ..+.+.+|+..++.+. ||||+++++.+.  +..+++|
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~-hp~iv~~~~~~~--~~~~lv~   78 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESES----ERKAFIVELRQLSRVN-HPNIVKLYGACL--NPVCLVM   78 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSSTT----HHHHHHHHHHHHHHCC-CTTBCCEEEBCT--TTTEEEE
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecChh----HHHHHHHHHHHHhcCC-CCCcCeEEEEEc--CCcEEEE
Confidence            47889999999999999999764  6789999986432    2456889999999998 899999998876  3479999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        79 e~~~~~~L~   87 (307)
T 2eva_A           79 EYAEGGSLY   87 (307)
T ss_dssp             ECCTTCBHH
T ss_pred             EcCCCCCHH
Confidence            999998874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.62  E-value=4.9e-15  Score=79.64  Aligned_cols=83  Identities=18%  Similarity=0.255  Sum_probs=69.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||.+... .+..+++|.+......   .+.+.+|+.+++.+. |||++++++.+. .+..+++|
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~~v~   86 (279)
T 1qpc_A           13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQ-HQRLVRLYAVVT-QEPIYIIT   86 (279)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCC-CTTBCCEEEEEC-SSSCEEEE
T ss_pred             HhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCccc---HHHHHHHHHHHHhCC-CcCcceEEEEEc-CCCcEEEE
Confidence            56889999999999999999864 4568999998754322   456889999999998 899999998876 45589999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++++++|.
T Consensus        87 e~~~~~~L~   95 (279)
T 1qpc_A           87 EYMENGSLV   95 (279)
T ss_dssp             ECCTTCBHH
T ss_pred             ecCCCCCHH
Confidence            999998874

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=1.9e-15  Score=83.55  Aligned_cols=84  Identities=20%  Similarity=0.359  Sum_probs=66.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch---hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST---DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      .+|.+.+.||+|+||.||.+.+..++..+|+|.+.......   .....+.+|+.+++.++ ||||+++++.+......+
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTCCE
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCC-CCCCCeEEEEEeeCCceE
Confidence            57899999999999999999998889999999997543211   11234778999999998 899999999999888999


Q ss_pred             EEEeccCC
Q psy8005          79 LLLELLDL   86 (91)
Q Consensus        79 lv~e~~~~   86 (91)
                      ++|||+++
T Consensus        89 lv~e~~~~   96 (346)
T 1ua2_A           89 LVFDFMET   96 (346)
T ss_dssp             EEEECCSE
T ss_pred             EEEEcCCC
Confidence            99999975

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.62  E-value=4.7e-15  Score=80.79  Aligned_cols=84  Identities=13%  Similarity=0.158  Sum_probs=64.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee---------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE---------   72 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~---------   72 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+....  ....+.+.+|+.+++.+. |||++++++.+.         
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLD-HDNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCC-CTTBCCEEEEECTTSCBCCC-
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcC-CCCeeEEEEeccccccccccc
Confidence            57899999999999999999999889999999986542  233456889999999998 899999988763         


Q ss_pred             -----eCCeEEEEEeccCCCCC
Q psy8005          73 -----SSHDMILLLELLDLNHH   89 (91)
Q Consensus        73 -----~~~~~~lv~e~~~~g~L   89 (91)
                           .....+++|||+++ +|
T Consensus        88 ~~~~~~~~~~~lv~e~~~~-~L  108 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYMET-DL  108 (320)
T ss_dssp             ---CCSCSEEEEEEECCSE-EH
T ss_pred             cccccccCceeEEeeccCC-CH
Confidence                 34678999999973 44

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=6.4e-15  Score=79.53  Aligned_cols=86  Identities=22%  Similarity=0.315  Sum_probs=68.8

Q ss_pred             Ccceeec-eecCcCeeEEEEEEEc--cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITK-SFPLGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~-~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|.+.+ .||+|+||.||++...  ..+..+++|.+..... ....+.+.+|+.+++.++ |||++++++.+ ..+..+
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~-~~~~~~   85 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLD-NPYIVRLIGVC-QAEALM   85 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEE-ESSSEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccc-hhHHHHHHHHHHHHHhCC-CCCEeEEEEEe-cCCCcE
Confidence            4566666 9999999999999864  3567899999976532 333556889999999998 89999999988 455689


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++||++++++|.
T Consensus        86 lv~e~~~~~~L~   97 (287)
T 1u59_A           86 LVMEMAGGGPLH   97 (287)
T ss_dssp             EEEECCTTEEHH
T ss_pred             EEEEeCCCCCHH
Confidence            999999988763

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.62  E-value=4.5e-15  Score=80.40  Aligned_cols=86  Identities=13%  Similarity=0.172  Sum_probs=67.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCC---cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheee-eeCCeEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF-ESSHDMI   78 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~   78 (91)
                      +|++.+.||+|+||.||++.....+   ..+++|.+..... ....+.+.+|+.+++.++ |||++++++.+ ...+..+
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSCCE
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC-HHHHHHHHHHHHHHHhCC-CCCEeeeeeEEEcCCCceE
Confidence            5788899999999999999865432   3588998865332 233456889999999998 89999999974 5566789


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++++|.
T Consensus       104 ~v~e~~~~~~L~  115 (298)
T 3f66_A          104 VVLPYMKHGDLR  115 (298)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEEeCCCCCCHH
Confidence            999999998874

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.61  E-value=1.1e-15  Score=85.45  Aligned_cols=65  Identities=18%  Similarity=0.294  Sum_probs=54.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~   73 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.....      ...+|+.+++.++ ||||+++++.+..
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~-hpnIv~l~~~~~~   71 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLD-HVNIIKLVDYFYT   71 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCC-CTTBCCEEEEEEE
T ss_pred             ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcC-CCCccchhheeee
Confidence            579999999999999999999999999999999865422      1236889999998 8999999988743

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.61  E-value=5.7e-15  Score=80.01  Aligned_cols=81  Identities=15%  Similarity=0.229  Sum_probs=64.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHh--cCCCCCeeeeheeeee----CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA--CRCNSRIVQLHQVFES----SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~~~~----~~   75 (91)
                      ++|.+.+.||+|+||.||++..  ++..+|+|.+....     ...+..+.+++..  +. |||++++++.+..    ..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~-h~niv~~~~~~~~~~~~~~   79 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD-----EKSWFRETELYNTVMLR-HENILGFIASDMTSRHSST   79 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCC-CTTBCCEEEEEEEEETTEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc-----chhhHHHHHHHHHhhcc-CcCeeeEEEeeccccCCCc
Confidence            5789999999999999999976  57889999986532     3345566676666  56 8999999887543    34


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++|+|.
T Consensus        80 ~~~lv~e~~~~g~L~   94 (301)
T 3q4u_A           80 QLWLITHYHEMGSLY   94 (301)
T ss_dssp             EEEEEECCCTTCBHH
T ss_pred             eeEEehhhccCCCHH
Confidence            689999999999874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.61  E-value=2.5e-15  Score=81.26  Aligned_cols=84  Identities=14%  Similarity=0.164  Sum_probs=68.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|.+.+.||+|+||.||++...   ..+++|.+..........+.+.+|+.+++.+. |||++++++.. .....+++|
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEE-CSSSCEEEE
T ss_pred             cceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCC-CCcEEEEEeec-cCCccEEEE
Confidence            46889999999999999999753   35899999765544444567899999999998 89999998854 556689999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus        99 e~~~~~~L~  107 (289)
T 3og7_A           99 QWCEGSSLY  107 (289)
T ss_dssp             ECCCEEEHH
T ss_pred             EecCCCcHH
Confidence            999988763

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.61  E-value=2.2e-15  Score=83.43  Aligned_cols=83  Identities=19%  Similarity=0.245  Sum_probs=56.2

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----   75 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----   75 (91)
                      +++|.+.+.||+|+||.||++.+..++..+|+|.+......   ......++..+..+. ||||+++++++....     
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~~~   97 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDLAVLH-HPNIVQLQSYFYTLGERDRR   97 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---CCHHHHHHHHHHHHC-CTTBCCEEEEEEEECSSCTT
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---cHHHHHHHHHHHhcC-CCCcccHHHhhhcccccccc
Confidence            36899999999999999999999988999999988654321   223455666777787 899999999886533     


Q ss_pred             --eEEEEEeccCCC
Q psy8005          76 --DMILLLELLDLN   87 (91)
Q Consensus        76 --~~~lv~e~~~~g   87 (91)
                        ..+++|||++++
T Consensus        98 ~~~~~lv~e~~~~~  111 (360)
T 3e3p_A           98 DIYLNVVMEYVPDT  111 (360)
T ss_dssp             CEEEEEEEECCSCB
T ss_pred             ceeEEEEeeccccc
Confidence              288999999875

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.60  E-value=1.6e-14  Score=80.33  Aligned_cols=83  Identities=17%  Similarity=0.252  Sum_probs=69.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-----Ce
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-----~~   76 (91)
                      .+|.+.+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.++..+. ||||+++++.+...     ..
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTC-HHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTTCCC
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccC-cHHHHHHHHHHHHHHhcC-CCCCccceeEEecCCccccce
Confidence            478999999999999999999998899999999975432 233456889999999998 89999999988654     36


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .++++|++++
T Consensus       105 ~~iv~e~~~~  114 (364)
T 3qyz_A          105 VYIVQDLMET  114 (364)
T ss_dssp             EEEEEECCSE
T ss_pred             EEEEEcccCc
Confidence            8999999974

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.60  E-value=4.1e-15  Score=87.83  Aligned_cols=81  Identities=26%  Similarity=0.403  Sum_probs=66.3

Q ss_pred             ceecCcCeeEEEEEEEc--cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +.||+|+||.||++...  ..+..+|+|.+..........+.+.+|+.++..++ ||||+++++.+.. +..++||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~-~~~~lv~E~~~  452 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRMIGICEA-ESWMLVMEMAE  452 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCC-CTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEec-CCEEEEEEccC
Confidence            47999999999999553  44578999999765443444567999999999998 8999999998864 55889999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +|+|.
T Consensus       453 ~g~L~  457 (635)
T 4fl3_A          453 LGPLN  457 (635)
T ss_dssp             TEEHH
T ss_pred             CCCHH
Confidence            98874

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.60  E-value=1.7e-15  Score=81.40  Aligned_cols=82  Identities=21%  Similarity=0.293  Sum_probs=67.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~~~~lv   80 (91)
                      ++|++.+.||+|+||.||.+...  +..+++|.+....    ..+.+.+|+.+++.+. |||++++++.+.. .+..+++
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv   93 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIV   93 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCEEE
T ss_pred             hhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCCceEEE
Confidence            57899999999999999999764  7789999987543    2456888999999998 8999999998544 4578999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      +|++++++|.
T Consensus        94 ~e~~~~~~L~  103 (278)
T 1byg_A           94 TEYMAKGSLV  103 (278)
T ss_dssp             ECCCTTEEHH
T ss_pred             EecCCCCCHH
Confidence            9999998764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.60  E-value=5.4e-15  Score=87.01  Aligned_cols=83  Identities=20%  Similarity=0.315  Sum_probs=66.6

Q ss_pred             eeec-eecCcCeeEEEEEEEcc--CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           5 KITK-SFPLGKYATVRRCRDRK--NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         5 ~~~~-~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+.+ .||+|+||.||++....  .+..+|+|.+..... ....+.+.+|+.+++.++ ||||+++++.+.. +..++||
T Consensus       338 ~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~-hpniv~l~~~~~~-~~~~lv~  414 (613)
T 2ozo_A          338 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EALMLVM  414 (613)
T ss_dssp             EEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCC-CTTBCCEEEEEES-SSEEEEE
T ss_pred             eEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCC-CCCEeeEEEEecc-CCeEEEE
Confidence            3344 79999999999997753  345799999976532 223567899999999998 8999999999865 5689999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus       415 E~~~~g~L~  423 (613)
T 2ozo_A          415 EMAGGGPLH  423 (613)
T ss_dssp             ECCTTCBHH
T ss_pred             EeCCCCcHH
Confidence            999999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.60  E-value=1.5e-14  Score=79.93  Aligned_cols=83  Identities=14%  Similarity=0.298  Sum_probs=69.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC-----Ce
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-----~~   76 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.+++.+. |||++++++.+...     ..
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK-PLFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS-HHHHHHHHHHHHHHHHCC-CTTBCCEEEECCCSCSTTCCC
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc-chHHHHHHHHHHHHHhCc-CCCcCCeeeeecccccCccce
Confidence            579999999999999999999988899999999964332 233456789999999998 89999999876543     67


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .++++|++++
T Consensus        89 ~~lv~e~~~~   98 (353)
T 2b9h_A           89 VYIIQELMQT   98 (353)
T ss_dssp             EEEEECCCSE
T ss_pred             EEEEEeccCc
Confidence            8999999974

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.60  E-value=7.2e-15  Score=79.87  Aligned_cols=82  Identities=20%  Similarity=0.246  Sum_probs=68.2

Q ss_pred             eeceecCcCeeEEEEEEEccCCcEEEEEEeccccC--chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR--STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         6 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      ..+.||+|+||.||++..  .+..+++|.+.....  .....+.+.+|+.+++.+. |||++++++.+...+..+++||+
T Consensus        35 ~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~  111 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCLVYVY  111 (307)
T ss_dssp             TCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEEEC
T ss_pred             cCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC-CCCeEEEEEEEecCCceEEEEEe
Confidence            348899999999999975  577899999875421  1233556889999999998 89999999999888899999999


Q ss_pred             cCCCCCC
Q psy8005          84 LDLNHHQ   90 (91)
Q Consensus        84 ~~~g~L~   90 (91)
                      +++++|.
T Consensus       112 ~~~~~L~  118 (307)
T 2nru_A          112 MPNGSLL  118 (307)
T ss_dssp             CTTCBHH
T ss_pred             cCCCcHH
Confidence            9998874

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.60  E-value=9.4e-15  Score=79.69  Aligned_cols=86  Identities=15%  Similarity=0.154  Sum_probs=71.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC-CCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-NSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+|.+.+.||+|+||.||++.+. .+..+|+|.+............+.+|+.++..+.+ |+|++++++.+...+..+++
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  106 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  106 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence            46889999999999999999875 47889999997655444445668899999999984 69999999999999999999


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      || +.+++|
T Consensus       107 ~e-~~~~~L  114 (313)
T 3cek_A          107 ME-CGNIDL  114 (313)
T ss_dssp             EC-CCSEEH
T ss_pred             Ee-cCCCcH
Confidence            99 555554

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.60  E-value=1.5e-14  Score=79.33  Aligned_cols=82  Identities=23%  Similarity=0.351  Sum_probs=67.9

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheee--------eeC
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF--------ESS   74 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~--------~~~   74 (91)
                      +|++.+.||+|+||.||++.+..++..+|+|.+....  ......+.+|+.++..+.+|||++++++.+        ...
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            6889999999999999999998889999999985542  233456888999999996689999998887        334


Q ss_pred             CeEEEEEeccCC
Q psy8005          75 HDMILLLELLDL   86 (91)
Q Consensus        75 ~~~~lv~e~~~~   86 (91)
                      ...++++||+++
T Consensus       107 ~~~~lv~e~~~g  118 (337)
T 3ll6_A          107 AEFLLLTELCKG  118 (337)
T ss_dssp             EEEEEEEECCSE
T ss_pred             ceEEEEEEecCC
Confidence            468999999974

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.60  E-value=5.6e-15  Score=81.15  Aligned_cols=86  Identities=23%  Similarity=0.259  Sum_probs=64.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|++.+.||+|+||.||++.+..++.    .+++|.+..... ......+.+|+.+++.++ |||++++++.+.... .
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~-~   91 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD-NPHVCRLLGICLTST-V   91 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCC-BTTBCCEEEEEESSS-E
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC-HHHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCC-e
Confidence            578999999999999999999876655    357777754321 223456889999999998 899999999987655 7


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++|++++|+|.
T Consensus        92 ~~v~e~~~~g~L~  104 (327)
T 3poz_A           92 QLITQLMPFGCLL  104 (327)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             EEEEEecCCCcHH
Confidence            8999999998874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.59  E-value=1.1e-14  Score=78.82  Aligned_cols=85  Identities=14%  Similarity=0.161  Sum_probs=67.8

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCc---EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE-EE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM-IL   79 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-~l   79 (91)
                      |...+.||+|+||.||++.....+.   .+++|.+..... ....+.+.+|+.+++.++ |||++++++.+...+.. ++
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLN-HPNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSCCEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc-HHHHHHHHHHHHHHHhCC-CCCeeeEEEEEecCCCCcEE
Confidence            4567899999999999998654433   789999865432 233456889999999998 89999999998766554 99


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ++|++.+++|.
T Consensus       101 v~e~~~~~~L~  111 (298)
T 3pls_A          101 LLPYMCHGDLL  111 (298)
T ss_dssp             EECCCTTCBHH
T ss_pred             EEecccCCCHH
Confidence            99999998874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.59  E-value=2.6e-15  Score=82.37  Aligned_cols=86  Identities=15%  Similarity=0.183  Sum_probs=67.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcE----EEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQ----YAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|++.+.||+|+||.||++.+..++..    +++|.+...... .....+.+|+.++..++ ||||+++++.+. ....
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~-~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~   89 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR-QSFQAVTDHMLAIGSLD-HAHIVRLLGLCP-GSSL   89 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC-SCBCSCCHHHHHHHTCC-CTTBCCEEEEEC-BSSE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH-HHHHHHHHHHHHHhcCC-CCCcCeEEEEEc-CCcc
Confidence            5789999999999999999998776654    777777543211 11234667888899998 899999999875 4568


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++||+++|+|.
T Consensus        90 ~~v~e~~~~~~L~  102 (325)
T 3kex_A           90 QLVTQYLPLGSLL  102 (325)
T ss_dssp             EEEEECCTTCBSH
T ss_pred             EEEEEeCCCCCHH
Confidence            9999999999884

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.59  E-value=1.1e-14  Score=80.12  Aligned_cols=81  Identities=14%  Similarity=0.236  Sum_probs=67.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHh--cCCCCCeeeeheeeeeCC----
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA--CRCNSRIVQLHQVFESSH----   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~~~~~~~----   75 (91)
                      ++|.+.+.||+|+||.||++..  .+..+|+|.+....     ...+.+|.+++..  +. |||++++++.+....    
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~-h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHHHSCCC-CTTBCCEEEEEECCCSSCC
T ss_pred             ccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh-----HHHHHHHHHHHHHhhcC-CCcEEEEEeeecccCCccc
Confidence            3688999999999999999987  47899999986432     3456778888877  55 899999999987665    


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++|+|.
T Consensus       114 ~~~lv~e~~~~g~L~  128 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLF  128 (342)
T ss_dssp             CEEEEECCCTTCBHH
T ss_pred             eeEEEEeecCCCcHH
Confidence            789999999999874

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.59  E-value=1.6e-14  Score=77.70  Aligned_cols=86  Identities=16%  Similarity=0.225  Sum_probs=69.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC---CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|.+.+.||+|+||.||++.+...   +..+++|.+..... ....+.+.+|+.+++.++ |||++++++.+.. +..+
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC-HHHHHHHHHHHHHHHHHC-CTTBCCEEEEECS-SSCE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC-chHHHHHHHHHHHHHhCC-CCCcceEEEEEcC-CCCE
Confidence            5788999999999999999986543   33689999876532 233556889999999998 8999999998764 4578


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++||++++++|.
T Consensus        89 ~v~e~~~~~~L~  100 (281)
T 3cc6_A           89 IIMELYPYGELG  100 (281)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEEecCCCCCHH
Confidence            999999998874

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.58  E-value=4.7e-16  Score=92.11  Aligned_cols=87  Identities=16%  Similarity=0.197  Sum_probs=71.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee------CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~------~~   75 (91)
                      .+|.+.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+.+++.++ ||||+++++.+..      .+
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCC-BTTBCCEEECCTTTCCCCTTS
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCC-CCCCCceeeeecccccccCCC
Confidence            57899999999999999999998889999999986543 2333556889999999998 8999999887654      66


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++|+|.
T Consensus        92 ~~~LVmEy~~ggsL~  106 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLR  106 (676)
T ss_dssp             SCCCEEECCSSCBHH
T ss_pred             eEEEEEEeCCCCCHH
Confidence            789999999998874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.58  E-value=1.6e-14  Score=79.61  Aligned_cols=81  Identities=21%  Similarity=0.352  Sum_probs=61.8

Q ss_pred             Ccceee-ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHH-HHHhcCCCCCeeeeheeeee----CC
Q psy8005           2 VNTKIT-KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVA-VLEACRCNSRIVQLHQVFES----SH   75 (91)
Q Consensus         2 ~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~----~~   75 (91)
                      ++|.+. +.||+|+||.||++.+..++..+|+|.+....       ....++. .++.+. |||++++++.+..    ..
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~-h~~i~~~~~~~~~~~~~~~   99 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASG-GPHIVCILDVYENMHHGKR   99 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTT-STTBCCEEEEEEEEETTEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcC-CCChHHHHHHHhhccCCCc
Confidence            468875 46999999999999999899999999986531       1112222 344455 8999999998865    44


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++|+|.
T Consensus       100 ~~~lv~e~~~gg~L~  114 (336)
T 3fhr_A          100 CLLIIMECMEGGELF  114 (336)
T ss_dssp             EEEEEEECCTTEEHH
T ss_pred             eEEEEEeccCCCCHH
Confidence            689999999998774

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.58  E-value=9.4e-16  Score=85.61  Aligned_cols=88  Identities=13%  Similarity=0.147  Sum_probs=64.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcC--CCCCeeeeh-------eee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACR--CNSRIVQLH-------QVF   71 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~i~~l~-------~~~   71 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+..... .....+.+.+|+.++..+.  +||||++++       +.+
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~  152 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  152 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred             ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence            458889999999999999999888899999999975432 2233456888995544443  289999988       444


Q ss_pred             eeCC-----------------eEEEEEeccCCCCCC
Q psy8005          72 ESSH-----------------DMILLLELLDLNHHQ   90 (91)
Q Consensus        72 ~~~~-----------------~~~lv~e~~~~g~L~   90 (91)
                      ...+                 ..+++|||+ +|+|.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~  187 (377)
T 3byv_A          153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQ  187 (377)
T ss_dssp             ECTTSCSEEEC------CEEESEEEEEECC-SEEHH
T ss_pred             hccCCccccccccCCCceEEEEEEEEEecc-CCCHH
Confidence            4332                 278999999 46663

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.58  E-value=1.9e-14  Score=78.34  Aligned_cols=87  Identities=25%  Similarity=0.332  Sum_probs=65.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc---hhHHHHHHHHHHHHHhcC--CCCCeeeeheeeeeCC-
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACR--CNSRIVQLHQVFESSH-   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~~~-   75 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+......   ........+|+.+++.+.  +|||++++++.+.... 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~   88 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT   88 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence            5799999999999999999999889999999999753211   111233556666665554  2899999999887654 


Q ss_pred             ----eEEEEEeccCCCCC
Q psy8005          76 ----DMILLLELLDLNHH   89 (91)
Q Consensus        76 ----~~~lv~e~~~~g~L   89 (91)
                          ..++++|++++ +|
T Consensus        89 ~~~~~~~lv~e~~~~-~L  105 (308)
T 3g33_A           89 DREIKVTLVFEHVDQ-DL  105 (308)
T ss_dssp             SSEEEEEEEEECCCC-BH
T ss_pred             CCceeEEEEehhhhc-CH
Confidence                57999999974 44

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.57  E-value=1.5e-14  Score=79.44  Aligned_cols=81  Identities=16%  Similarity=0.233  Sum_probs=64.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhc--CCCCCeeeeheeeeeC----C
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC--RCNSRIVQLHQVFESS----H   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~~~~~----~   75 (91)
                      ++|++.+.||+|+||.||++...  +..+|+|.+....     ......+.+++...  . ||||+++++.+...    .
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE-----EASWFRETEIYQTVLMR-HENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEESCGGGC
T ss_pred             cceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc-----cchhhhHHHHHHHHhhc-CCCeeeEEEEEccCCCCCC
Confidence            46899999999999999999864  7899999985432     23344555555544  5 89999999988766    6


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..+++|||+++|+|.
T Consensus       109 ~~~lv~e~~~~g~L~  123 (337)
T 3mdy_A          109 QLYLITDYHENGSLY  123 (337)
T ss_dssp             EEEEEECCCTTCBHH
T ss_pred             ceEEEEeccCCCcHH
Confidence            899999999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.57  E-value=8.1e-15  Score=81.89  Aligned_cols=83  Identities=19%  Similarity=0.318  Sum_probs=68.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC-------CCCeeeeheeee--
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-------NSRIVQLHQVFE--   72 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~l~~~~~--   72 (91)
                      .+|.+.+.||+|+||.||++.+..++..+|+|.+...   ......+.+|+.+++.+.+       |+|++++++.+.  
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            4689999999999999999999988999999999643   2234567889998888752       678999999886  


Q ss_pred             --eCCeEEEEEeccCCC
Q psy8005          73 --SSHDMILLLELLDLN   87 (91)
Q Consensus        73 --~~~~~~lv~e~~~~g   87 (91)
                        .....+++||++.++
T Consensus       114 ~~~~~~~~lv~e~~~~~  130 (397)
T 1wak_A          114 GVNGTHICMVFEVLGHH  130 (397)
T ss_dssp             ETTEEEEEEEECCCCCB
T ss_pred             CCCCceEEEEEeccCcc
Confidence              455789999999543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.57  E-value=6.9e-15  Score=80.46  Aligned_cols=86  Identities=23%  Similarity=0.316  Sum_probs=65.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhc---CCCCCeeeeheeee-----
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC---RCNSRIVQLHQVFE-----   72 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~~~~-----   72 (91)
                      ++|.+.+.||+|+||.||++.+. ..+..+|+|.+............+.+|+.+++.+   . |||++++++.+.     
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE-HPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTC-CTTBCCEEEEEEEEECS
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccC-CCCeEeeeeeeeecccC
Confidence            46899999999999999999985 5678899999875432221122355677666665   5 899999999876     


Q ss_pred             eCCeEEEEEeccCCCCC
Q psy8005          73 SSHDMILLLELLDLNHH   89 (91)
Q Consensus        73 ~~~~~~lv~e~~~~g~L   89 (91)
                      .....++++|++++ +|
T Consensus        90 ~~~~~~lv~e~~~~-~L  105 (326)
T 1blx_A           90 RETKLTLVFEHVDQ-DL  105 (326)
T ss_dssp             SEEEEEEEEECCSC-BH
T ss_pred             CCceEEEEEecCCC-CH
Confidence            45678999999984 54

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.57  E-value=2.4e-14  Score=84.85  Aligned_cols=86  Identities=15%  Similarity=0.242  Sum_probs=69.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC---CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|.+.+.||+|+||.||++.+...   +..+++|.+..... ....+.+.+|+.+++.++ ||||+++++.+. .+..+
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS-DSVREKFLQEALTMRQFD-HPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEC-SSSCE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC-HHHHHHHHHHHHHHHhCC-CCCCCeEEEEEe-cCceE
Confidence            3578889999999999999987643   35788998765332 333456889999999998 899999999874 45689


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++|+|.
T Consensus       467 lv~E~~~~g~L~  478 (656)
T 2j0j_A          467 IIMELCTLGELR  478 (656)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEEEcCCCCcHH
Confidence            999999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.57  E-value=9e-15  Score=81.76  Aligned_cols=85  Identities=13%  Similarity=0.185  Sum_probs=67.2

Q ss_pred             ceeeceecCcCeeEEEEEEEccCC---cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheee-eeCCeEEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF-ESSHDMIL   79 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~l   79 (91)
                      |.+.+.||+|+||.||++.....+   ..+++|.+..... ......+.+|+.+++.+. ||||+++++.+ ...+..++
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSC-SHHHHHHHHHHTTSTTCC-CTTBCCCCEEECCCSSCCEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCC-HHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCCCeEE
Confidence            567789999999999999875432   3678998865322 233566889999999998 89999999975 44567899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus       169 v~e~~~~g~L~  179 (373)
T 3c1x_A          169 VLPYMKHGDLR  179 (373)
T ss_dssp             EEECCTTCBHH
T ss_pred             EEECCCCCCHH
Confidence            99999999874

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.56  E-value=1.6e-14  Score=80.17  Aligned_cols=83  Identities=22%  Similarity=0.319  Sum_probs=67.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc---------hhHHHHHHHHHHHHHhcCCCCCeeeeheeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS---------TDLKAEILHEVAVLEACRCNSRIVQLHQVFE   72 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~   72 (91)
                      ++|.+.+.||+|+||.||.+.+.. +..+|+|.+......         ....+.+.+|+.+++.+. ||||+++++.+.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~   99 (362)
T 3pg1_A           22 SPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLRDIFV   99 (362)
T ss_dssp             CSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEEE
T ss_pred             cceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC-CcCccceeeeEE
Confidence            579999999999999999998754 889999998653221         112356899999999998 899999999874


Q ss_pred             e-----CCeEEEEEeccCC
Q psy8005          73 S-----SHDMILLLELLDL   86 (91)
Q Consensus        73 ~-----~~~~~lv~e~~~~   86 (91)
                      .     ....+++|||+++
T Consensus       100 ~~~~~~~~~~~lv~e~~~~  118 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMRT  118 (362)
T ss_dssp             ECCTTTCCEEEEEEECCSE
T ss_pred             eccCCCcceEEEEEccCCC
Confidence            3     3468999999984

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.56  E-value=2e-14  Score=79.02  Aligned_cols=86  Identities=23%  Similarity=0.265  Sum_probs=69.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcE----EEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQ----YAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~----~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|++.+.||+|+||.||++.+..++..    +++|.+..... ......+.+|+.+++.++ ||||+++++.+.... .
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~-~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~-~   91 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD-NPHVCRLLGICLTST-V   91 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS-CCCHHHHHHHHHHHTTCC-BTTBCCCCEEEESSS-E
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC-HHHHHHHHHHHHHHHhCC-CCCeeEEEEEEecCC-c
Confidence            5789999999999999999998776654    47776654322 223556889999999998 899999999987655 7


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++|++++|+|.
T Consensus        92 ~~v~~~~~~g~L~  104 (327)
T 3lzb_A           92 QLITQLMPFGCLL  104 (327)
T ss_dssp             EEEECCCSSCBHH
T ss_pred             eEEEEecCCCcHH
Confidence            8999999998764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.56  E-value=7.8e-14  Score=79.18  Aligned_cols=82  Identities=20%  Similarity=0.352  Sum_probs=68.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcC-----CCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-----CNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~l~~~~~~~~~   76 (91)
                      .+|.+.+.||+|+||.||++.+..++..+|+|.+...   ......+.+|+.++..+.     +|+|++++++.+.....
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            3588999999999999999999998999999999653   222345677777777763     26799999999999999


Q ss_pred             EEEEEeccCC
Q psy8005          77 MILLLELLDL   86 (91)
Q Consensus        77 ~~lv~e~~~~   86 (91)
                      .+++||++++
T Consensus       174 ~~lv~e~~~~  183 (429)
T 3kvw_A          174 ICMTFELLSM  183 (429)
T ss_dssp             EEEEECCCCC
T ss_pred             EEEEEeccCC
Confidence            9999999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.56  E-value=4.1e-14  Score=79.15  Aligned_cols=84  Identities=23%  Similarity=0.294  Sum_probs=68.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCC-----CeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS-----RIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+...   ......+..|+.++..+.+|+     +++++.+.+...+.
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            6789999999999999999999988999999999643   222345667777777776445     48899999988999


Q ss_pred             EEEEEeccCCCCC
Q psy8005          77 MILLLELLDLNHH   89 (91)
Q Consensus        77 ~~lv~e~~~~g~L   89 (91)
                      .++|||++++ +|
T Consensus       131 ~~lv~e~~~~-~L  142 (382)
T 2vx3_A          131 LCLVFEMLSY-NL  142 (382)
T ss_dssp             EEEEEECCCC-BH
T ss_pred             eEEEEecCCC-CH
Confidence            9999999975 54

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.56  E-value=2.3e-15  Score=82.06  Aligned_cols=87  Identities=21%  Similarity=0.205  Sum_probs=64.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh----HHHHHHHHHHHHHhc----CCCCCeeeeheeeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD----LKAEILHEVAVLEAC----RCNSRIVQLHQVFES   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~i~~l~~~~~~   73 (91)
                      ++|.+.+.||+|+||.||++.+..++..+++|.+........    ....+.+|+..+..+    . |+|++++++.+..
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~-h~~i~~~~~~~~~  109 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG-HPGVIRLLDWFET  109 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCC-CSSBCCEEEEC--
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCC-CCCeeeEEEEEec
Confidence            468999999999999999999988899999999976532211    122355688888887    5 8999999999988


Q ss_pred             CCeEEEEEec-cCCCCC
Q psy8005          74 SHDMILLLEL-LDLNHH   89 (91)
Q Consensus        74 ~~~~~lv~e~-~~~g~L   89 (91)
                      .+..++++|+ +++++|
T Consensus       110 ~~~~~~v~e~~~~~~~L  126 (312)
T 2iwi_A          110 QEGFMLVLERPLPAQDL  126 (312)
T ss_dssp             ---CEEEEECCSSEEEH
T ss_pred             CCeEEEEEEecCCCCCH
Confidence            8889999999 677765

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.56  E-value=6.1e-15  Score=80.81  Aligned_cols=88  Identities=19%  Similarity=0.232  Sum_probs=71.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch----hHHHHHHHHHHHHHhcCC-CCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRC-NSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.......    .....+.+|+.+++.+.+ |+|++++.+.+...+.
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~  122 (320)
T 3a99_A           43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS  122 (320)
T ss_dssp             TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence            47899999999999999999998889999999997653221    112336678888888873 6999999999999999


Q ss_pred             EEEEEeccCC-CCC
Q psy8005          77 MILLLELLDL-NHH   89 (91)
Q Consensus        77 ~~lv~e~~~~-g~L   89 (91)
                      .++++|++.+ ++|
T Consensus       123 ~~lv~e~~~~~~~L  136 (320)
T 3a99_A          123 FVLILERPEPVQDL  136 (320)
T ss_dssp             EEEEEECCSSEEEH
T ss_pred             EEEEEEcCCCCccH
Confidence            9999999875 544

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.56  E-value=1.5e-14  Score=78.04  Aligned_cols=87  Identities=20%  Similarity=0.285  Sum_probs=62.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-CCc--EEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-NGT--QYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~--~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|++.+.||+|+||.||++.... .+.  .+++|.+...... ....+.+.+|+.+++.+. |||++++++.+.... .
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECSSS-C
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCC-CCCcccEEEEEccCC-c
Confidence            478999999999999999998643 233  6899998754322 233456889999999998 899999999887655 8


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++|++++++|.
T Consensus        96 ~~v~e~~~~~~L~  108 (291)
T 1u46_A           96 KMVTELAPLGSLL  108 (291)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             eeeEecccCCCHH
Confidence            8999999998864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.56  E-value=2.7e-14  Score=78.43  Aligned_cols=82  Identities=15%  Similarity=0.195  Sum_probs=61.0

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHH--HhcCCCCCeeeeheeee-----e
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVL--EACRCNSRIVQLHQVFE-----S   73 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~l~~~~~-----~   73 (91)
                      +++|++.+.||+|+||.||++..  .+..+|+|.+....     ...+..+.++.  ..+. |+|++++++.+.     .
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~~   83 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN-----RQNFINEKNIYRVPLME-HDNIARFIVGDERVTADG   83 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECTTS
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhcc-CcchhhheecccccccCC
Confidence            47899999999999999999965  57899999986442     22334444443  3466 899999986432     2


Q ss_pred             CCeEEEEEeccCCCCCC
Q psy8005          74 SHDMILLLELLDLNHHQ   90 (91)
Q Consensus        74 ~~~~~lv~e~~~~g~L~   90 (91)
                      ....+++|||+++|+|.
T Consensus        84 ~~~~~lv~e~~~~g~L~  100 (336)
T 3g2f_A           84 RMEYLLVMEYYPNGSLX  100 (336)
T ss_dssp             CEEEEEEECCCTTCBHH
T ss_pred             CceEEEEEecCCCCcHH
Confidence            33678999999999874

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.55  E-value=1.8e-14  Score=81.14  Aligned_cols=78  Identities=19%  Similarity=0.352  Sum_probs=58.9

Q ss_pred             cee-eceecCcCeeEEEEEEEc--cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee--eCCeEE
Q psy8005           4 TKI-TKSFPLGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE--SSHDMI   78 (91)
Q Consensus         4 ~~~-~~~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~--~~~~~~   78 (91)
                      |.+ .+.||+|+||.||++...  ..+..+|+|.+.....    ...+.+|+.+++.+. ||||+++++.+.  .....+
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~   96 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELK-HPNVISLQKVFLSHADRKVW   96 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCC-CTTBCCCCEEEEETTTTEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcC-CCCeeeEeeEEecCCCCeEE
Confidence            454 458999999999999965  4578899999975543    235778999999998 899999999984  467899


Q ss_pred             EEEeccCC
Q psy8005          79 LLLELLDL   86 (91)
Q Consensus        79 lv~e~~~~   86 (91)
                      ++|||+++
T Consensus        97 lv~e~~~~  104 (405)
T 3rgf_A           97 LLFDYAEH  104 (405)
T ss_dssp             EEEECCSE
T ss_pred             EEEeCCCC
Confidence            99999975

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.54  E-value=8.2e-15  Score=82.95  Aligned_cols=78  Identities=22%  Similarity=0.233  Sum_probs=63.5

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------Ce
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------HD   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------~~   76 (91)
                      +|.+.+.||+|+||.||++.+..++..+|+|.+.....      ...+|+.+++.+. |+||+++++.+...      ..
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~-hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCC-CTTBCCEEEEEEEEETTTTEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcC-CCCccceeeEEeccCCCCccee
Confidence            58889999999999999999998899999999865421      1336889999998 89999998877432      24


Q ss_pred             EEEEEeccCCC
Q psy8005          77 MILLLELLDLN   87 (91)
Q Consensus        77 ~~lv~e~~~~g   87 (91)
                      ++++|||++++
T Consensus       128 ~~lv~e~~~~~  138 (420)
T 1j1b_A          128 LNLVLDYVPET  138 (420)
T ss_dssp             EEEEEECCCEE
T ss_pred             EEeehhccccc
Confidence            67999999853

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.54  E-value=5.4e-14  Score=76.02  Aligned_cols=84  Identities=13%  Similarity=0.155  Sum_probs=66.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.....    ...+.+|+.++..+.+++++..+..........+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            579999999999999999999988899999999875433    2247789999999984334444444556677889999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+ +++|.
T Consensus        85 e~~-~~~L~   92 (296)
T 3uzp_A           85 ELL-GPSLE   92 (296)
T ss_dssp             ECC-CCBHH
T ss_pred             Eec-CCCHH
Confidence            999 77663

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.54  E-value=4.9e-14  Score=77.26  Aligned_cols=84  Identities=24%  Similarity=0.348  Sum_probs=67.4

Q ss_pred             CcceeeceecCcCeeEEEEEEE-ccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC-----CCCeeeeheeeeeCC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRD-RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-----NSRIVQLHQVFESSH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~~~~~~~~   75 (91)
                      ++|.+.+.||+|+||.||++.+ ...+..+|+|.+...   ......+.+|+.++..+.+     +++++++++.+...+
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            5799999999999999999988 456789999998643   2234557788888887762     235899999999999


Q ss_pred             eEEEEEeccCCCCC
Q psy8005          76 DMILLLELLDLNHH   89 (91)
Q Consensus        76 ~~~lv~e~~~~g~L   89 (91)
                      ..+++||++ +++|
T Consensus        91 ~~~lv~e~~-~~~l  103 (339)
T 1z57_A           91 HICIVFELL-GLST  103 (339)
T ss_dssp             EEEEEEECC-CCBH
T ss_pred             cEEEEEcCC-CCCH
Confidence            999999999 6555

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.53  E-value=1.1e-15  Score=83.35  Aligned_cols=85  Identities=15%  Similarity=0.173  Sum_probs=68.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..   .+++|.+..........+.+.+|+.+++.+. |+|++++++.+...+..++++
T Consensus        33 ~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~iv~  108 (319)
T 2y4i_B           33 EQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTR-HENVVLFMGACMSPPHLAIIT  108 (319)
T ss_dssp             SCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCC-CTTBCCCCEEEECSSCEEEEC
T ss_pred             HHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCceEEEe
Confidence            678999999999999999998753   4889988754322222334667888888998 899999999999888999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++++|.
T Consensus       109 e~~~~~~L~  117 (319)
T 2y4i_B          109 SLCKGRTLY  117 (319)
T ss_dssp             BCCCSEEHH
T ss_pred             ecccCCcHH
Confidence            999988763

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.52  E-value=1.4e-14  Score=80.07  Aligned_cols=87  Identities=9%  Similarity=-0.044  Sum_probs=61.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc---CCcEEEEEEeccccCchh---------HHHHHHHHHHHHHhcCCCCCeeeehe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTD---------LKAEILHEVAVLEACRCNSRIVQLHQ   69 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~l~~   69 (91)
                      ++|.+.+.||+|+||.||++.+..   .+..+++|..........         ....+.+++..+..+. |||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~ni~~~~~  115 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLD-YLGIPLFYG  115 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCS-CCCCCCEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccc-ccCcceeec
Confidence            468999999999999999999876   677899999876432110         1122556777888888 899999999


Q ss_pred             eeee----CCeEEEEEeccCCCCCC
Q psy8005          70 VFES----SHDMILLLELLDLNHHQ   90 (91)
Q Consensus        70 ~~~~----~~~~~lv~e~~~~g~L~   90 (91)
                      .+..    ....+++||++ +++|.
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~  139 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQ  139 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHH
T ss_pred             ccccccCCCcEEEEEEecc-CCCHH
Confidence            8877    67899999999 77763

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.52  E-value=5.7e-14  Score=75.89  Aligned_cols=84  Identities=13%  Similarity=0.155  Sum_probs=63.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+.....    ...+.+|+.++..+.+++++..+..+....+..+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            478999999999999999999988999999998755432    2246778899999984344444555556778889999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |++ +++|.
T Consensus        85 e~~-~~~L~   92 (296)
T 4hgt_A           85 ELL-GPSLE   92 (296)
T ss_dssp             ECC-CCBHH
T ss_pred             Ecc-CCCHH
Confidence            999 77653

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.52  E-value=6.7e-14  Score=80.56  Aligned_cols=84  Identities=12%  Similarity=0.159  Sum_probs=68.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++.+..++..+|+|.+......    ..+..|+.++..+.+++++..+..+....+..+++|
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            5799999999999999999999888999999988654332    246788999999986566666666667788899999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+ +++|.
T Consensus        83 e~~-g~sL~   90 (483)
T 3sv0_A           83 DLL-GPSLE   90 (483)
T ss_dssp             ECC-CCBHH
T ss_pred             ECC-CCCHH
Confidence            999 77653

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.51  E-value=7.8e-14  Score=79.27  Aligned_cols=79  Identities=16%  Similarity=0.076  Sum_probs=63.4

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEec
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   83 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~   83 (91)
                      |...+.||+|+||.|+.+ ...++..+|+|.+....     .+.+.+|+.++..+.+||||+++++.+......+++||+
T Consensus        17 ~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~   90 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL   90 (434)
T ss_dssp             EEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence            445688999999999865 34568899999986432     345678999998874589999999999999999999999


Q ss_pred             cCCCCC
Q psy8005          84 LDLNHH   89 (91)
Q Consensus        84 ~~~g~L   89 (91)
                      ++ |+|
T Consensus        91 ~~-gsL   95 (434)
T 2rio_A           91 CN-LNL   95 (434)
T ss_dssp             CS-EEH
T ss_pred             CC-CCH
Confidence            96 455

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.51  E-value=1.1e-13  Score=77.12  Aligned_cols=87  Identities=10%  Similarity=0.101  Sum_probs=55.9

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcC-CCCCeeeehe-------eeee
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACR-CNSRIVQLHQ-------VFES   73 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~i~~l~~-------~~~~   73 (91)
                      +|.+.+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.++..+. +|||++++..       .+..
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~  142 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV  142 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred             eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence            4888999999999999999999899999999998765422 23445677754444443 3899887543       3322


Q ss_pred             C-----------------CeEEEEEeccCCCCCC
Q psy8005          74 S-----------------HDMILLLELLDLNHHQ   90 (91)
Q Consensus        74 ~-----------------~~~~lv~e~~~~g~L~   90 (91)
                      +                 ...++||||++ |+|.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~  175 (371)
T 3q60_A          143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLE  175 (371)
T ss_dssp             TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHH
T ss_pred             CCCCCeeeccCCcccceeeeEEEEecCCC-CCHH
Confidence            2                 34899999998 6663

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.51  E-value=5.3e-14  Score=78.26  Aligned_cols=87  Identities=7%  Similarity=-0.011  Sum_probs=61.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-----CcEEEEEEeccccCchh---------HHHHHHHHHHHHHhcCCCCCeeee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTD---------LKAEILHEVAVLEACRCNSRIVQL   67 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~l   67 (91)
                      .+|.+.+.||+|+||.||++.+..+     +..+|+|.+........         .......+...+..+. |+||+++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~-h~~iv~~  113 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLK-YLGVPKY  113 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCS-CCCSCCE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhcc-CCCCCeE
Confidence            3789999999999999999988654     46899999875431100         0011334444556666 8999999


Q ss_pred             heeeeeC----CeEEEEEeccCCCCCC
Q psy8005          68 HQVFESS----HDMILLLELLDLNHHQ   90 (91)
Q Consensus        68 ~~~~~~~----~~~~lv~e~~~~g~L~   90 (91)
                      ++.+...    ...+++|||+ +++|.
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~  139 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQ  139 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHH
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHH
Confidence            9987654    4589999999 77663

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.49  E-value=1e-13  Score=77.01  Aligned_cols=84  Identities=19%  Similarity=0.319  Sum_probs=67.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC----------CCCeeeeheee
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC----------NSRIVQLHQVF   71 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~i~~l~~~~   71 (91)
                      .+|.+.+.||+|+||.||++.+..++..+|+|.+....   .....+.+|+.+++.+.+          |+|++++++.+
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~   95 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   95 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc---cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence            47899999999999999999998889999999986432   224457778888777652          58999999988


Q ss_pred             eeCC----eEEEEEeccCCCCC
Q psy8005          72 ESSH----DMILLLELLDLNHH   89 (91)
Q Consensus        72 ~~~~----~~~lv~e~~~~g~L   89 (91)
                      ....    ..++++|++ +++|
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L  116 (373)
T 1q8y_A           96 NHKGPNGVHVVMVFEVL-GENL  116 (373)
T ss_dssp             EEEETTEEEEEEEECCC-CEEH
T ss_pred             hccCCCCceEEEEEecC-CCCH
Confidence            7543    789999998 5554

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.49  E-value=3.1e-14  Score=78.81  Aligned_cols=80  Identities=11%  Similarity=0.045  Sum_probs=62.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc--------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeee-------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK--------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQ-------   66 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~--------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------   66 (91)
                      ++|.+.+.||+|+||.||++.+..        .+..+|+|.+...       ..+.+|+.+++.+. |||+++       
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~-h~niv~~~~~~~~  113 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAA-KPLQVNKWKKLYS  113 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHC-CHHHHHHHHHHTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhc-ccchhhhhhhhcc
Confidence            578999999999999999999876        3778999998654       24667888888888 788887       


Q ss_pred             --------eheeeee-CCeEEEEEeccCCCCCC
Q psy8005          67 --------LHQVFES-SHDMILLLELLDLNHHQ   90 (91)
Q Consensus        67 --------l~~~~~~-~~~~~lv~e~~~~g~L~   90 (91)
                              +++.+.. ....+++|||+ +++|.
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~  145 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQ  145 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHH
T ss_pred             CCccCccchhhccccCCcEEEEEecCC-CcCHH
Confidence                    3444443 67889999999 87764

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.47  E-value=2.3e-13  Score=75.04  Aligned_cols=82  Identities=24%  Similarity=0.364  Sum_probs=66.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC-cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCC------eeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG-TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR------IVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||++.+..++ ..+|+|.+...   ....+.+.+|+.+++.+. |++      ++.+.+.+...
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~   94 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIK-EKDKENKFLCVLMSDWFNFH   94 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHH-HHCTTSCSCBCCEEEEEEET
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHh-hcCCCCceeEEEeeeeeeeC
Confidence            57899999999999999999988776 68999998643   223455778888888876 344      88888888888


Q ss_pred             CeEEEEEeccCCC
Q psy8005          75 HDMILLLELLDLN   87 (91)
Q Consensus        75 ~~~~lv~e~~~~g   87 (91)
                      +..+++||+++++
T Consensus        95 ~~~~lv~e~~~~~  107 (355)
T 2eu9_A           95 GHMCIAFELLGKN  107 (355)
T ss_dssp             TEEEEEEECCCCB
T ss_pred             CeEEEEEeccCCC
Confidence            9999999999543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.45  E-value=6.9e-14  Score=78.63  Aligned_cols=77  Identities=18%  Similarity=0.211  Sum_probs=60.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------e
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------D   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------~   76 (91)
                      +|.+.+.||+|+||.||.+.+..++. +++|.+.....      ...+|+.+++.+. ||||+++++.+....      .
T Consensus        41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~------~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~~~~~  112 (394)
T 4e7w_A           41 AYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR------FKNRELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVF  112 (394)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT------SCCHHHHHHHTCC-CTTBCCEEEEEEEESSSSSCEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc------hHHHHHHHHHhCC-CCCcceEEEEEEecCCCCCceE
Confidence            58899999999999999998876554 77777754321      1225888999998 899999998885433      3


Q ss_pred             EEEEEeccCCC
Q psy8005          77 MILLLELLDLN   87 (91)
Q Consensus        77 ~~lv~e~~~~g   87 (91)
                      .+++|||++++
T Consensus       113 ~~lv~e~~~~~  123 (394)
T 4e7w_A          113 LNLVLEYVPET  123 (394)
T ss_dssp             EEEEEECCSEE
T ss_pred             EEEEeeccCcc
Confidence            88999999864

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.45  E-value=3.5e-13  Score=73.04  Aligned_cols=81  Identities=20%  Similarity=0.216  Sum_probs=60.0

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch----------------hHHHHHHHHHHHHHhcCCCCCeeee
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST----------------DLKAEILHEVAVLEACRCNSRIVQL   67 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~i~~l   67 (91)
                      |.+.+.||+|+||.||.+.+ .++..+|+|.+.......                .....+.+|+.+++.+. |   +++
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~---~~v  166 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-G---LAV  166 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-T---SSS
T ss_pred             EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-C---CCc
Confidence            44569999999999999998 778999999996432111                12445889999999997 4   444


Q ss_pred             heeeeeCCeEEEEEeccCCCCCC
Q psy8005          68 HQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        68 ~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      ++.+.. +..+++|||+++++|.
T Consensus       167 ~~~~~~-~~~~lvmE~~~g~~L~  188 (282)
T 1zar_A          167 PKVYAW-EGNAVLMELIDAKELY  188 (282)
T ss_dssp             CCEEEE-ETTEEEEECCCCEEGG
T ss_pred             CeEEec-cceEEEEEecCCCcHH
Confidence            444433 4569999999999885

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.45  E-value=1.4e-13  Score=78.23  Aligned_cols=78  Identities=13%  Similarity=0.016  Sum_probs=62.8

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +|.+.+.||+|+||.|+.. ...++..+|+|.+......     ...+|+.+++.+..||||+++++.+......+++||
T Consensus        25 ~y~~~~~LG~G~~G~V~~~-~~~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEE-EESSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEecCCeeecCcCEEEEEE-EEeCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            4778899999999997643 3456889999998654321     245788899998558999999999999999999999


Q ss_pred             ccCC
Q psy8005          83 LLDL   86 (91)
Q Consensus        83 ~~~~   86 (91)
                      ++++
T Consensus        99 ~~~g  102 (432)
T 3p23_A           99 LCAA  102 (432)
T ss_dssp             CCSE
T ss_pred             CCCC
Confidence            9974

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.39  E-value=5.7e-13  Score=78.04  Aligned_cols=81  Identities=19%  Similarity=0.091  Sum_probs=57.1

Q ss_pred             ecCcCeeEEEEEEEccCCcEEEEEEeccccCc--------hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005          10 FPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS--------TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus        10 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+.+..+....+.....|..+++|.+......        ....+.+.+|+++|+.+.+|+||++++++++++...||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            34444544444444445778899999765321        1234459999999999977999999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||++|++|.
T Consensus       322 Eyv~G~~L~  330 (569)
T 4azs_A          322 EKLPGRLLS  330 (569)
T ss_dssp             ECCCSEEHH
T ss_pred             ecCCCCcHH
Confidence            999999885

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.35  E-value=2.8e-12  Score=74.75  Aligned_cols=81  Identities=12%  Similarity=0.016  Sum_probs=54.7

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh------HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD------LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .+.||+|+||.||++.  ..+..+++|..........      ..+.+.+|+.+++.++ |||++++.......+..+++
T Consensus       341 ~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          341 EHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVK-DFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             -------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGG-GGTCCCCCEEEEETTTTEEE
T ss_pred             CCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcC-CCCcCceEEEEEeCCccEEE
Confidence            4689999999999993  3467788887654332211      1334789999999998 89999655454566678999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++++|.
T Consensus       418 mE~~~ggsL~  427 (540)
T 3en9_A          418 MSYINGKLAK  427 (540)
T ss_dssp             EECCCSEEHH
T ss_pred             EECCCCCCHH
Confidence            9999998874

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.99  E-value=2.5e-10  Score=64.46  Aligned_cols=33  Identities=21%  Similarity=0.253  Sum_probs=28.9

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEecc
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRK   37 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~   37 (91)
                      |.+...||+|++|.||.+.+. .|..+|+|++..
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~  129 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRL  129 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECT
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEec
Confidence            788999999999999999874 588999998754

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.93  E-value=3.5e-09  Score=56.74  Aligned_cols=79  Identities=20%  Similarity=0.217  Sum_probs=53.2

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcE--EEEEEeccccCch----------------------hHHHHHHHHHHHHHhcC
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQ--YAAKFLRKKRRST----------------------DLKAEILHEVAVLEACR   59 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~--~~~k~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~   59 (91)
                      |.+.+.||+|+||.||.+.+..++..  +|+|.+.......                      .....+.+|...+..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56788999999999999988677888  9999875431110                      01135778888898887


Q ss_pred             CCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005          60 CNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus        60 ~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                       |+++. ....+. ....++||||++
T Consensus       129 -~~~i~-~p~~~~-~~~~~lVmE~~g  151 (258)
T 1zth_A          129 -EAGVS-VPQPYT-YMKNVLLMEFIG  151 (258)
T ss_dssp             -HTTCC-CCCEEE-EETTEEEEECCE
T ss_pred             -hCCCC-CCeEEE-cCCCEEEEEecC
Confidence             45431 111111 134689999994

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.76  E-value=1.4e-08  Score=57.65  Aligned_cols=57  Identities=12%  Similarity=0.094  Sum_probs=43.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcC
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACR   59 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~   59 (91)
                      +|...+.||+|+||.||++.+..++..+|+|.+...... ....+.+.+|+.+++.+.
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~  136 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLR  136 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGST
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhc
Confidence            366788999999999999999999999999998743221 112345778888888776

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.70  E-value=8.1e-08  Score=51.29  Aligned_cols=84  Identities=11%  Similarity=-0.046  Sum_probs=62.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+....+.++.+.||+....  +..+++|.........  ...+.+|..+++.+..+.++++++......+..|++|
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   89 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCC--HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence            45777777888888899988643  5789999986532111  2347788888888865567778888877788899999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      |+++|.+|
T Consensus        90 e~i~G~~l   97 (263)
T 3tm0_A           90 SEADGVLC   97 (263)
T ss_dssp             ECCSSEEH
T ss_pred             EecCCeeh
Confidence            99998765

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.23  E-value=8.6e-06  Score=43.19  Aligned_cols=80  Identities=15%  Similarity=-0.051  Sum_probs=52.9

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeeheeeeeCCeEEEEEe
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      +.+....+.|..+.||+... ..+..+++|......     ...+.+|..+++.+.++ ..+++++......+..+++||
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~~-----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e   95 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG   95 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred             CceEecccCCCCceEEEEec-CCCCeEEEEeCCccc-----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence            44433334566688998854 446678999875431     12366777777777643 225557777666677899999


Q ss_pred             ccCCCCC
Q psy8005          83 LLDLNHH   89 (91)
Q Consensus        83 ~~~~g~L   89 (91)
                      +++|.+|
T Consensus        96 ~i~G~~l  102 (264)
T 1nd4_A           96 EVPGQDL  102 (264)
T ss_dssp             CCSSEET
T ss_pred             ecCCccc
Confidence            9998776

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.62  E-value=0.0013  Score=36.46  Aligned_cols=76  Identities=14%  Similarity=0.105  Sum_probs=53.0

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC--CCeeeeheeeeeCCeEEEEEecc
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN--SRIVQLHQVFESSHDMILLLELL   84 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~l~~~~~~~~~~~lv~e~~   84 (91)
                      .+.++.|....+|+...  .+..+.+|......     ...+..|...++.+...  ..+++.+......+..+++||++
T Consensus        41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~~-----~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND--EVQTVFVKINERSY-----RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEEECCSSSSEEEEEES--SSCEEEEEEEEGGG-----HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeCCccceeeeEEEE--CCCeEEEEeCCccc-----HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence            45788898899998764  35678888765431     34466777777666422  45566666655667889999999


Q ss_pred             CCCCC
Q psy8005          85 DLNHH   89 (91)
Q Consensus        85 ~~g~L   89 (91)
                      ++.++
T Consensus       114 ~G~~~  118 (312)
T 3jr1_A          114 NKSKN  118 (312)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            98765

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.61  E-value=0.00044  Score=38.60  Aligned_cols=81  Identities=14%  Similarity=0.155  Sum_probs=51.8

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEec--cccCchhHHHHHHHHHHHHHhcCC-CCCeeeeheeeeeC---CeEEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLR--KKRRSTDLKAEILHEVAVLEACRC-NSRIVQLHQVFESS---HDMILL   80 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~---~~~~lv   80 (91)
                      .+.++.|..+.+|.....  +..+++|...  .... ......+.+|..+++.+.. +.++++++......   +..|++
T Consensus        43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EEECCC-CCSCEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            567888999999987653  4578888775  3221 1112357788888888873 24466666665544   347899


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||+++|.++.
T Consensus       120 me~v~G~~l~  129 (359)
T 3dxp_A          120 MEFVSGRVLW  129 (359)
T ss_dssp             EECCCCBCCC
T ss_pred             EEecCCeecC
Confidence            9999988763

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.59  E-value=0.00077  Score=36.08  Aligned_cols=68  Identities=13%  Similarity=0.143  Sum_probs=48.1

Q ss_pred             EEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCCCCC
Q psy8005          17 TVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDLNHH   89 (91)
Q Consensus        17 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~g~L   89 (91)
                      .+|+......+..+.+|.-+..     ....+.+|...++.+..+-.+.+++......+..+++||+++|.++
T Consensus        40 ~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           40 TIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             eEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            4777665555667888876432     1335777888888876544566777777778889999999988653

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.78  E-value=0.0058  Score=34.63  Aligned_cols=79  Identities=10%  Similarity=-0.020  Sum_probs=45.8

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccC--ch---hHHHHHHHHHHHHHhcCCC-C-CeeeeheeeeeCCeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR--ST---DLKAEILHEVAVLEACRCN-S-RIVQLHQVFESSHDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~-~-~i~~l~~~~~~~~~~~l   79 (91)
                      .+.+|.|..+.||++.....+..+++|.......  ..   ........|..+++.+... + .+++++..  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            5688999999999986554567899998653211  00   0122356677777766422 2 23333322  3344689


Q ss_pred             EEeccCCC
Q psy8005          80 LLELLDLN   87 (91)
Q Consensus        80 v~e~~~~g   87 (91)
                      +||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999763

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.68  E-value=0.022  Score=30.87  Aligned_cols=79  Identities=18%  Similarity=0.008  Sum_probs=49.0

Q ss_pred             eeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         6 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      -.+.+|.|..+.||+... .+|..+.+|..+......  ...+..|...++.+.. ..-++....+... .-+++||+++
T Consensus        19 ~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~--~~~~~~Ea~~L~~L~~-~~~vpvP~v~~~~-~~~lv~e~l~   93 (288)
T 3f7w_A           19 AVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPAL--DGLFRAEALGLDWLGR-SFGSPVPQVAGWD-DRTLAMEWVD   93 (288)
T ss_dssp             EEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCC--TTHHHHHHHHHHHHTC-STTCCSCCEEEEE-TTEEEEECCC
T ss_pred             EEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcch--hhHHHHHHHHHHHHHh-hCCCCcceEEecc-CceEEEEeec
Confidence            356788899999998864 457889999865433211  2236678888887753 2122222222222 2478999988


Q ss_pred             CCCC
Q psy8005          86 LNHH   89 (91)
Q Consensus        86 ~g~L   89 (91)
                      ++..
T Consensus        94 ~~~~   97 (288)
T 3f7w_A           94 ERPP   97 (288)
T ss_dssp             CCCC
T ss_pred             ccCC
Confidence            7653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.31  E-value=0.023  Score=31.22  Aligned_cols=74  Identities=12%  Similarity=0.018  Sum_probs=46.9

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCC--Ceeeeheeee-eCCeEEEEEec
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS--RIVQLHQVFE-SSHDMILLLEL   83 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~l~~~~~-~~~~~~lv~e~   83 (91)
                      .+.++.|....+|..     +..+++|....    ......+.+|..+++.+..+.  .+++...... ..+..+++||+
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence            345677777778776     45678887422    222456888999999887431  2334333332 33457899999


Q ss_pred             cCCCCC
Q psy8005          84 LDLNHH   89 (91)
Q Consensus        84 ~~~g~L   89 (91)
                      ++|.++
T Consensus        95 i~G~~l  100 (306)
T 3tdw_A           95 VQGQIL  100 (306)
T ss_dssp             CCSEEC
T ss_pred             cCCeEC
Confidence            998765

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=95.01  E-value=0.078  Score=29.57  Aligned_cols=82  Identities=7%  Similarity=0.032  Sum_probs=47.4

Q ss_pred             ecee-cCcCeeEEEEEEEc--c----CCcEEEEEEecccc---CchhHHHHHHHHHHHHHhcCCC--CCeeeeheeeeeC
Q psy8005           7 TKSF-PLGKYATVRRCRDR--K----NGTQYAAKFLRKKR---RSTDLKAEILHEVAVLEACRCN--SRIVQLHQVFESS   74 (91)
Q Consensus         7 ~~~i-g~g~~~~v~~~~~~--~----~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~i~~l~~~~~~~   74 (91)
                      .+.+ +.|....+|+....  .    .+..+++|......   ...  ...+.+|..+++.+..+  ..+++++......
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~--~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~  102 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP--TYRLDHQFEVIRLVGELTDVPVPRVRWIETTG  102 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS--CCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc--hhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence            3566 77888888876542  0    14567888765432   100  12355566666665432  2455555544333


Q ss_pred             ---CeEEEEEeccCCCCCC
Q psy8005          75 ---HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ---~~~~lv~e~~~~g~L~   90 (91)
                         +..+++||+++|.++.
T Consensus       103 ~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          103 DVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TTTSSCEEEEECCCCBCCC
T ss_pred             CccCCceEEEEecCCCChh
Confidence               3468999999987653

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=94.65  E-value=0.0018  Score=37.74  Aligned_cols=61  Identities=11%  Similarity=0.085  Sum_probs=14.2

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEE------EEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheee
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAA------KFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF   71 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~------k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~   71 (91)
                      .+.+|   ||.|+.+........+|+      |..............+.++..+++.++ |+|+++.+...
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~-H~niv~~h~f~  213 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQ-IPKYEKIHNFK  213 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCcccccccccccccccccccccccccccc-ccccCCCcceE
Confidence            34555   999998877554455666      544332222222334666777777777 89999887654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=94.47  E-value=0.11  Score=28.41  Aligned_cols=75  Identities=11%  Similarity=0.012  Sum_probs=45.9

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCC--eeeeheeeeeCC---eEEEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR--IVQLHQVFESSH---DMILLL   81 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~l~~~~~~~~---~~~lv~   81 (91)
                      .+.++.|....+|...     ..+++|.....    .....+.+|..+++.+..+..  +++.........   ..|++|
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm   95 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF   95 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence            3467788888888652     45788875432    224458888888888743322  233333322222   348899


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ++++|.++.
T Consensus        96 ~~i~G~~l~  104 (304)
T 3sg8_A           96 TKIKGVPLT  104 (304)
T ss_dssp             ECCCCEECC
T ss_pred             cccCCeECC
Confidence            999987663

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=94.41  E-value=0.3  Score=26.84  Aligned_cols=74  Identities=7%  Similarity=0.040  Sum_probs=37.6

Q ss_pred             ceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC----CCCeeeeh-e--eeeeCCeEEEE
Q psy8005           8 KSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC----NSRIVQLH-Q--VFESSHDMILL   80 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~l~-~--~~~~~~~~~lv   80 (91)
                      +.++.|..+.+|+....  +..+++|.....      ...+..+..++..+..    -|.++... +  .....+..+++
T Consensus        38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l  109 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV  109 (346)
T ss_dssp             EECC----CEEEEEEET--TEEEEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred             eeccccccCcEEEEEeC--CCCEEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence            45555667788887643  345888888652      1122233333333321    13333211 1  11245678999


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      +++++|.++
T Consensus       110 ~~~i~G~~~  118 (346)
T 2q83_A          110 YDWIEGRPF  118 (346)
T ss_dssp             EECCCCBCC
T ss_pred             EEeecCccC
Confidence            999998765

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=90.75  E-value=0.72  Score=26.47  Aligned_cols=75  Identities=13%  Similarity=0.007  Sum_probs=39.3

Q ss_pred             ceecCcCeeEEEEEEEcc-------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           8 KSFPLGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      +.+..|.-..+|++....       .+..+.+|......   .......+|..+++.+..+.-.++++..+.  +  .++
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v  128 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRL  128 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccE
Confidence            345555556678776532       24678888753211   113345577777777664322344554443  2  289


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      +||++|.+|
T Consensus       129 ~e~i~G~~l  137 (379)
T 3feg_A          129 EQYIPSRPL  137 (379)
T ss_dssp             EECCSEEEC
T ss_pred             EEEecCccC
Confidence            999998655

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=89.87  E-value=1.4  Score=25.61  Aligned_cols=75  Identities=11%  Similarity=0.054  Sum_probs=44.2

Q ss_pred             eceecCcCeeEEEEEEEcc-------CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      .+.++.|....+|++....       .+..+++|+......    ...+..|..++..+..+.-.+++++.+.  +  .+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~----~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~  149 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET----ESHLVAESVIFTLLSERHLGPKLYGIFS--G--GR  149 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC----HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc----HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CE
Confidence            4567777777899887542       246788888733111    1334467777776653222244544432  2  38


Q ss_pred             EEeccCCCCC
Q psy8005          80 LLELLDLNHH   89 (91)
Q Consensus        80 v~e~~~~g~L   89 (91)
                      ++||++|.++
T Consensus       150 v~e~l~G~~l  159 (429)
T 1nw1_A          150 LEEYIPSRPL  159 (429)
T ss_dssp             EECCCCEEEC
T ss_pred             EEEEeCCccc
Confidence            8999987554

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=86.02  E-value=3.4  Score=23.79  Aligned_cols=27  Identities=15%  Similarity=-0.032  Sum_probs=20.4

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEe
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFL   35 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~   35 (91)
                      .+.++.|..+.+|+...  .+..+++|..
T Consensus        39 i~~l~~G~~n~vyrv~~--~~~~~vvK~~   65 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG--SSGSLVIKQA   65 (420)
T ss_dssp             EEECCCSSSCEEEEEEC--SSCEEEEEEC
T ss_pred             EEEccCCCcEEEEEEEc--CCceEEEEEC
Confidence            56788899999998853  3567889943

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=85.49  E-value=4  Score=24.13  Aligned_cols=76  Identities=11%  Similarity=0.040  Sum_probs=43.0

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccCC
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLDL   86 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~~   86 (91)
                      .+.|+.|....+|+......+..+++|.........   -...+|..++..+..+.-.++++..+.  +  ..++||++|
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~---idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G  185 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI---INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG  185 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC---SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh---cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence            456777777788888764434678888764321110   012467777777764322345555542  2  259999987


Q ss_pred             CCC
Q psy8005          87 NHH   89 (91)
Q Consensus        87 g~L   89 (91)
                      .+|
T Consensus       186 ~~l  188 (458)
T 2qg7_A          186 YAL  188 (458)
T ss_dssp             EEC
T ss_pred             ccC
Confidence            554

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=83.67  E-value=3.9  Score=22.42  Aligned_cols=77  Identities=10%  Similarity=-0.027  Sum_probs=39.3

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeehee------eeeCCeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQV------FESSHDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~------~~~~~~~~l   79 (91)
                      .+.++.|....+|.....  +..+++|.......    ...+..|..++..+..+ -.++++...      ....+..++
T Consensus        27 ~~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~~~----~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~  100 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTT--KDPLILTLYEKRVE----KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAA  100 (322)
T ss_dssp             EEEECC---EEEEEEEES--SCCEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEE
T ss_pred             eeccCCCcccceEEEEeC--CccEEEEEeCCCCC----HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEE
Confidence            345666777778877643  23678888765311    11234455555554421 112232211      122356789


Q ss_pred             EEeccCCCCC
Q psy8005          80 LLELLDLNHH   89 (91)
Q Consensus        80 v~e~~~~g~L   89 (91)
                      ++++++|.++
T Consensus       101 l~~~l~G~~~  110 (322)
T 2ppq_A          101 LISFLEGMWL  110 (322)
T ss_dssp             EEECCCCBCC
T ss_pred             EEEeCCCcCC
Confidence            9999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	91
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-11
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	4e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-11
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-10
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-10
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	9e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-09
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-09
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-08
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-08
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-08
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-07
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-07
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-06
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-06
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-05
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-05

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 1e-11
 Identities = 29/77 (37%), Positives = 53/77 (68%), Gaps = 5/77 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 68
          G++A V++CR++  G QYAAKF++K+R    R    + +I  EV++L+  + +  ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 79

Query: 69 QVFESSHDMILLLELLD 85
          +V+E+  D+IL+LEL+ 
Sbjct: 80 EVYENKTDVILILELVA 96

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 55.5 bits (133), Expect = 3e-11
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G +  V R  +R  G  +AAKF+     S   K  +  E+  +   R +  +V LH  FE
Sbjct: 37  GAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR-HPTLVNLHDAFE 93

Query: 73  SSHDMILLLELLD 85
             ++M+++ E + 
Sbjct: 94  DDNEMVMIYEFMS 106

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 55.1 bits (132), Expect = 4e-11
 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G +  V RC ++  G  + AKF+         K  + +E++++     + +++ LH  FE
Sbjct: 40  GAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIMNQLH-HPKLINLHDAFE 96

Query: 73  SSHDMILLLELLD 85
             ++M+L+LE L 
Sbjct: 97  DKYEMVLILEFLS 109

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 7e-11
 Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G    V +   + +G   A K +  + +   ++ +I+ E+ VL  C     IV  +  F 
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP-YIVGFYGAFY 74

Query: 73 SSHDMILLLELLD 85
          S  ++ + +E +D
Sbjct: 75 SDGEISICMEHMD 87

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 53.5 bits (128), Expect = 1e-10
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 7/80 (8%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRK-------KRRSTDLKAEILHEVAVLEACRCNSRIV 65
          G  + VRRC  +    +YA K +              +L+   L EV +L     +  I+
Sbjct: 14 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 73

Query: 66 QLHQVFESSHDMILLLELLD 85
          QL   +E++    L+ +L+ 
Sbjct: 74 QLKDTYETNTFFFLVFDLMK 93

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.1 bits (127), Expect = 2e-10
 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G ++ V    D++     A K + KK      +  + +E+AVL   + +  IV L  ++E
Sbjct: 20 GAFSEVILAEDKRTQKLVAIKCIAKKALEGK-EGSMENEIAVLHKIK-HPNIVALDDIYE 77

Query: 73 SSHDMILLLELLD 85
          S   + L+++L+ 
Sbjct: 78 SGGHLYLIMQLVS 90

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.7 bits (126), Expect = 2e-10
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRK-KRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +  V   RD +N    A K +    ++S +   +I+ EV  L+  R  +  +Q    +
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN-TIQYRGCY 84

Query: 72 ESSHDMILLLELLD 85
             H   L++E   
Sbjct: 85 LREHTAWLVMEYCL 98

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 3e-10
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE-ILHEVAVLEACRCNSRIVQLHQVF 71
          G +  V     +K    +A K L+K     D   E  + E  VL     +  +  +   F
Sbjct: 13 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 72

Query: 72 ESSHDMILLLELLD 85
          ++  ++  ++E L+
Sbjct: 73 QTKENLFFVMEYLN 86

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 3e-10
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V+   +R      A K +  K R+ D    I  E+ + +    +  +V+ +    
Sbjct: 16 GAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN-HENVVKFYGHRR 73

Query: 73 SSHDMILLLELLDLNHH 89
            +   L LE       
Sbjct: 74 EGNIQYLFLEYCSGGEL 90

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (123), Expect = 6e-10
 Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V + R++  G   A K +R    +  + +  + E+++L+    +  IV+L  V  
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLLDVIH 71

Query: 73 SSHDMILLLELLDLNHHQ 90
          + + + L+ E L  +  +
Sbjct: 72 TENKLYLVFEFLHQDLKK 89

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 51.4 bits (122), Expect = 7e-10
 Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           GKY+ V    +  N  +   K L+  ++      +I  E+ +LE  R    I+ L  + +
Sbjct: 46  GKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLADIVK 100

Query: 73  SSHDMILLLELLDLNH 88
                   L    +N+
Sbjct: 101 DPVSRTPALVFEHVNN 116

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 9e-10
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y +V    D K G + A K L +  +S         E+ +L+  + +  ++ L  VF 
Sbjct: 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFT 87

Query: 73 SSHDM 77
           +  +
Sbjct: 88 PARSL 92

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 1e-09
 Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 4/73 (5%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G++  V RC +  +   Y AKF++ K      +  +  E+++L   R  + I+ LH+ FE
Sbjct: 16 GEFGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIARHRN-ILHLHESFE 71

Query: 73 SSHDMILLLELLD 85
          S  +++++ E + 
Sbjct: 72 SMEELVMIFEFIS 84

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 1e-09
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 2/74 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G ++TV   R+     +YA K L K+     +    +  E  V+         V+L+  F
Sbjct: 19 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF-FVKLYFTF 77

Query: 72 ESSHDMILLLELLD 85
          +    +   L    
Sbjct: 78 QDDEKLYFGLSYAK 91

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 2e-09
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G   TV    D   G + A + +  +++    K  I++E+ V+   + N  IV     + 
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENK-NPNIVNYLDSYL 87

Query: 73 SSHDMILLLELL 84
             ++ +++E L
Sbjct: 88 VGDELWVVMEYL 99

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 2e-09
 Identities = 13/75 (17%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF- 71
          G Y   ++ R + +G     K L     +   K  ++ EV +L   +  + IV+ +    
Sbjct: 15 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN-IVRYYDRII 73

Query: 72 -ESSHDMILLLELLD 85
            ++  + +++E  +
Sbjct: 74 DRTNTTLYIVMEYCE 88

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-09
 Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G + TV +  D +   + A   L+ ++ +   +     E  +L+  +  +  V+ +  +E
Sbjct: 20 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI-VRFYDSWE 78

Query: 73 SS----HDMILLLELLD 85
          S+      ++L+ EL+ 
Sbjct: 79 STVKGKKCIVLVTELMT 95

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-09
 Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRST---DLKAEILHEVAVLEACRCNSRIVQLHQ 69
          G++ATV + RD+      A K ++   RS     +    L E+ +L+    +  I+ L  
Sbjct: 9  GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLD 67

Query: 70 VFESSHDMILLLELLDLNHHQ 90
           F    ++ L+ + ++ +   
Sbjct: 68 AFGHKSNISLVFDFMETDLEV 88

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-09
 Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  V + ++++     AAK +  K  S +   + + E+ +L +C   + IV+L   F 
Sbjct: 23 GAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPN-IVKLLDAFY 79

Query: 73 SSHDMILLLELLD 85
            +++ +L+E   
Sbjct: 80 YENNLWILIEFCA 92

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 2e-09
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y TV + ++R+     A K +R       + +  L E+ +L+  +  + IV+LH V  
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN-IVRLHDVLH 71

Query: 73 SSHDMILLLELLDLNHHQ 90
          S   + L+ E  D +  +
Sbjct: 72 SDKKLTLVFEFCDQDLKK 89

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.7 bits (118), Expect = 3e-09
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNS--RIVQLHQ 69
          G +  V  CR    G  YA K L KKR +    +   L+E  +L          IV +  
Sbjct: 15 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 74

Query: 70 VFESSHDMILLLELLD 85
           F +   +  +L+L++
Sbjct: 75 AFHTPDKLSFILDLMN 90

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 3e-09
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 2/74 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          GK+  V   R++++    A K L K +     ++ ++  EV +    R  + I++L+  F
Sbjct: 17 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN-ILRLYGYF 75

Query: 72 ESSHDMILLLELLD 85
            +  + L+LE   
Sbjct: 76 HDATRVYLILEYAP 89

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 4e-09
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G Y  V    D + G + A K L +  +S         E+ +L+  R +  ++ L  VF 
Sbjct: 29  GAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-HENVIGLLDVFT 87

Query: 73  SSH------DMILLLELLDLNHHQ 90
                    D  L++  +  +  +
Sbjct: 88  PDETLDDFTDFYLVMPFMGTDLGK 111

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 48.7 bits (115), Expect = 6e-09
 Identities = 16/72 (22%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V + ++   G  +A K +R ++    + +  + E+++L+  + +  IV+L+ V  
Sbjct: 13 GTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS-NIVKLYDVIH 70

Query: 73 SSHDMILLLELL 84
          +   ++L+ E L
Sbjct: 71 TKKRLVLVFEHL 82

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 1e-08
 Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  V + R RK G + A K +  +          L E+ +L+  +  + +V L ++  
Sbjct: 21 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN-VVNLIEICR 79

Query: 73 SSHDMILLLE 82
          +        +
Sbjct: 80 TKASPYNRCK 89

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 47.9 bits (113), Expect = 1e-08
 Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  +    +  N  Q A KF  ++  +  L+ E      +L  C     I  ++   +
Sbjct: 16 GSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEY-RTYKLLAGCTG---IPNVYYFGQ 71

Query: 73 SSHDMILLLELLDLNHHQ 90
               +L+++LL  +   
Sbjct: 72 EGLHNVLVIDLLGPSLED 89

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 1e-08
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF- 71
           G    V    D       A K L +  ++         E+ +++       I+ L  VF 
Sbjct: 28  GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK-NIISLLNVFT 86

Query: 72  -----ESSHDMILLLELLDLNHHQ 90
                E   D+ L++EL+D N  Q
Sbjct: 87  PQKTLEEFQDVYLVMELMDANLCQ 110

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.4 bits (112), Expect = 2e-08
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +  V   R R NG  YA K L+K+             E  +L        I+++   F
Sbjct: 15 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF-IIRMWGTF 73

Query: 72 ESSHDMILLLELLDLNHHQ 90
          + +  + ++++ ++     
Sbjct: 74 QDAQQIFMIMDYIEGGELF 92

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 2e-08
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE----ILHEVAVLEACRCNSR-IVQL 67
          G + +V       +    A K + K R S   +      +  EV +L+        +++L
Sbjct: 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 74

Query: 68 HQVFESSHDMILLLELLDLNH 88
             FE     +L+LE  +   
Sbjct: 75 LDWFERPDSFVLILERPEPVQ 95

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 3e-08
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G Y  V    D  N  + A K +      T  +   L E+ +L   R +  I+ ++ +  
Sbjct: 19 GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFR-HENIIGINDIIR 76

Query: 73 SSH-----DMILLLELLDLNHHQ 90
          +       D+ L+  L+  + ++
Sbjct: 77 APTIEQMKDVYLVTHLMGADLYK 99

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 46.7 bits (110), Expect = 4e-08
 Identities = 15/72 (20%), Positives = 22/72 (30%), Gaps = 2/72 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G  + V   RD +     A K LR    R          E     A   +  IV ++   
Sbjct: 18 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTG 76

Query: 72 ESSHDMILLLEL 83
          E+      L  +
Sbjct: 77 EAETPAGPLPYI 88

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.4 bits (109), Expect = 4e-08
 Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 4/73 (5%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  +    D   G + A K    K +      ++  E  + +  +    I  +     
Sbjct: 18 GSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGA 73

Query: 73 SSHDMILLLELLD 85
               ++++ELL 
Sbjct: 74 EGDYNVMVMELLG 86

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.9 bits (108), Expect = 7e-08
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G+Y  V     +K     A K L++     +   E L E AV++  +    +VQL  V  
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKH-PNLVQLLGVCT 83

Query: 73 SSHDMILLLELLD 85
                ++ E + 
Sbjct: 84 REPPFYIITEFMT 96

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 8e-08
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLR-KKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +  V + R +K+G +  A   R K+  S D   +   E+ VL     +  I+ L    
Sbjct: 21 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 80

Query: 72 ESSHDMILLLELLD 85
          E    + L +E   
Sbjct: 81 EHRGYLYLAIEYAP 94

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 1e-07
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
          G +  V   R++  G  YA K LRK+   + D  A  + E  VL+  R    +  L   F
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF-LTALKYAF 74

Query: 72 ESSHDMILLLE 82
          ++   +  ++E
Sbjct: 75 QTHDRLCFVME 85

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-07
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 11/77 (14%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G    V +  +++   ++A K L+   +          EV +         IV++  V+E
Sbjct: 23 GINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRASQCPHIVRIVDVYE 75

Query: 73 SSHD----MILLLELLD 85
          + +     +++++E LD
Sbjct: 76 NLYAGRKCLLIVMECLD 92

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 3e-07
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 6/78 (7%)

Query: 13  GKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 67
           G +  V                 A K L+     T+ +  ++ E+ VL     +  IV L
Sbjct: 34  GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE-ALMSELKVLSYLGNHMNIVNL 92

Query: 68  HQVFESSHDMILLLELLD 85
                     +++ E   
Sbjct: 93  LGACTIGGPTLVITEYCC 110

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 4e-07
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 13  GKYATVRRCRDRKNG-----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 67
           G +  V               Q A K L++K  S++ +  ++ E+ ++     +  IV L
Sbjct: 48  GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSERE-ALMSELKMMTQLGSHENIVNL 106

Query: 68  HQVFESSHDMILLLELLD 85
                 S  + L+ E   
Sbjct: 107 LGACTLSGPIYLIFEYCC 124

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 7e-07
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 13  GKYATVRRCRD---RKNGTQYAAKFLRKKRRSTDLKA--EILHEVAVLEACRCNSRIVQL 67
           G Y  V   R       G  YA K L+K       K       E  VLE  R +  +V L
Sbjct: 35  GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL 94

Query: 68  HQVFESSHDMILLLEL 83
           H  F++   + L+L+ 
Sbjct: 95  HYAFQTETKLHLILDY 110

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.1 bits (100), Expect = 8e-07
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-------LKAEILHEVAVLEACRCNSRIV 65
           G ++TV   +D  N T  A K +R  +  T+       L   +       E     + I+
Sbjct: 24  GHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL 83

Query: 66  QLHQVFESSHDMILLLELLDLNHHQ 90
           +L   F       + + ++     +
Sbjct: 84  KLLDHFNHKGPNGVHVVMVFEVLGE 108

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 9e-07
 Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 13/84 (15%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
           G +  V + +   +G   A K + + +R          E+ ++     +  IV+L   F 
Sbjct: 31  GSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLD-HCNIVRLRYFFY 83

Query: 73  SSHD------MILLLELLDLNHHQ 90
           SS +      + L+L+ +    ++
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYR 107

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 3e-06
 Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G++  V       N  + A K +R+   S +   + + E  V+     + ++VQL+ V  
Sbjct: 16 GQFGLVHLGYW-LNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLS-HPKLVQLYGVCL 70

Query: 73 SSHDMILLLELLD 85
              + L+ E ++
Sbjct: 71 EQAPICLVFEFME 83

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 3e-06
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 13 GKYATVRRCRDRKNGTQYAA-KFLRKKRRSTDLKAEILHEVAVLEACRCNSR--IVQLHQ 69
          G Y  V + RD KNG ++ A K +R +     +    + EVAVL          +V+L  
Sbjct: 18 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD 77

Query: 70 VFESSHD 76
          V   S  
Sbjct: 78 VCTVSRT 84

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 4e-06
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 13  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 71
           G +  V   + +++G  YA K L K++          L+E  +L+A      +V+L   F
Sbjct: 52  GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF-LVKLEFSF 110

Query: 72  ESSHDM 77
           + + ++
Sbjct: 111 KDNSNL 116

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 1e-05
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G +  V         T+ A K L+    S +     L E  V++  R   ++VQL+ V  
Sbjct: 28 GCFGEVWMGTW-NGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHE-KLVQLYAVVS 82

Query: 73 SSHDMILL 80
               I+ 
Sbjct: 83 EEPIYIVT 90

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 4e-05
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 5/73 (6%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 72
          G + TV + +        A K L     +        +EV VL   R +  I+     + 
Sbjct: 19 GSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFM-GYS 73

Query: 73 SSHDMILLLELLD 85
          ++  + ++ +  +
Sbjct: 74 TAPQLAIVTQWCE 86

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (85), Expect = 9e-05
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 13 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF- 71
          G++  V     R  G + A K ++            L E +V+   R +S +VQL  V  
Sbjct: 18 GEFGDVMLGDYR--GNKVAVKCIKNDAT----AQAFLAEASVMTQLR-HSNLVQLLGVIV 70

Query: 72 ESSHDMILLLELLD 85
          E    + ++ E + 
Sbjct: 71 EEKGGLYIVTEYMA 84

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	91
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.92
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.9
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.9
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.9
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.9
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.9
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.9
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.9
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.9
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.89
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.89
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.89
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.89
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.88
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.88
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.88
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.87
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.86
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.86
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.86
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.86
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.85
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.85
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.85
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.85
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.84
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.84
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.84
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.84
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.84
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.83
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.83
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.83
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.82
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.82
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.81
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.81
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.81
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.8
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.8
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.8
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.79
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.79
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.79
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.79
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.79
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.79
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.77
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.77
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.77
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.75
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.74
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.74
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.73
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.73
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.73
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.72
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.7
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.39
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.18
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.47
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	95.84
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.73

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.4e-25  Score=116.88  Aligned_cols=89  Identities=17%  Similarity=0.194  Sum_probs=76.2

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .++|++.+.||+|+||.||++.+..++..+|+|.++..... ...+.+.+|+.+++.++ ||||+++++++.+++.+|+|
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~Ei~~l~~l~-HpnIv~~~~~~~~~~~~~iv   81 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYLF   81 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHhCC-CCCEeeEeeeeccCceeEEE
Confidence            47899999999999999999999999999999999765432 22446889999999998 89999999999999999999


Q ss_pred             EeccCCCCCCC
Q psy8005          81 LELLDLNHHQA   91 (91)
Q Consensus        81 ~e~~~~g~L~~   91 (91)
                      |||+++|+|++
T Consensus        82 mEy~~gg~L~~   92 (271)
T d1nvra_          82 LEYCSGGELFD   92 (271)
T ss_dssp             EECCTTEEGGG
T ss_pred             EeccCCCcHHH
Confidence            99999999863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.9e-25  Score=116.91  Aligned_cols=88  Identities=15%  Similarity=0.224  Sum_probs=76.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~l   79 (91)
                      |+|++.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++ ||||+++++.+.+  ++.+|+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCC-CTTBCCEEEEEEC----CEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEeCCCCEEEE
Confidence            7899999999999999999999999999999999876655555667899999999998 8999999998753  557899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        83 vmEy~~~g~L~   93 (269)
T d2java1          83 VMEYCEGGDLA   93 (269)
T ss_dssp             EEECCTTEEHH
T ss_pred             EEecCCCCcHH
Confidence            99999999874

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8e-24  Score=113.61  Aligned_cols=88  Identities=32%  Similarity=0.610  Sum_probs=77.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch----hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+.+.....    ...+.+.+|+.+++.++ ||||+++++++.+.+.+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEE
Confidence            45899999999999999999999999999999997654321    13566899999999998 89999999999999999


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      |+|||||++|+|.
T Consensus        89 ~iv~E~~~gg~L~  101 (293)
T d1jksa_          89 ILILELVAGGELF  101 (293)
T ss_dssp             EEEEECCCSCBHH
T ss_pred             EEEEEcCCCcccc
Confidence            9999999999874

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.5e-24  Score=114.15  Aligned_cols=89  Identities=21%  Similarity=0.320  Sum_probs=77.8

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      +++|.+.+.||+|+||.||++.+..++..+|+|.+.+.... ......+.+|+.+++.++ ||||+++++++.+++.+++
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~i   83 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYL   83 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC-CCCCCeEEEEEEECCEEEE
Confidence            57899999999999999999999999999999999754321 123456889999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++|+|.
T Consensus        84 vmEy~~~g~L~   94 (263)
T d2j4za1          84 ILEYAPLGTVY   94 (263)
T ss_dssp             EEECCTTCBHH
T ss_pred             EEeecCCCcHH
Confidence            99999999874

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.9e-24  Score=115.09  Aligned_cols=86  Identities=23%  Similarity=0.461  Sum_probs=76.9

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      .++|.+.+.||+|+||.||+|.+..++..+|+|.+.....   ....+.+|+.+++.++ ||||+++++++.+.+.+|+|
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~---~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~lv   79 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT---DQVLVKKEISILNIAR-HRNILHLHESFESMEELVMI   79 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH---HHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc---cHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEEE
Confidence            4789999999999999999999999999999999976532   2345789999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      ||||++|+|+
T Consensus        80 mE~~~gg~L~   89 (321)
T d1tkia_          80 FEFISGLDIF   89 (321)
T ss_dssp             ECCCCCCBHH
T ss_pred             EecCCCCcHH
Confidence            9999999875

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.90  E-value=2.8e-24  Score=117.74  Aligned_cols=87  Identities=23%  Similarity=0.469  Sum_probs=77.7

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+.+.||+|+||.||++.+..++..+|+|.+....  ....+.+.+|+.+++.++ ||||+++++++.+.+.+++|
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv  101 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMI  101 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTEEEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEE
Confidence            468999999999999999999999999999999997653  223456889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus       102 mE~~~gg~L~  111 (350)
T d1koaa2         102 YEFMSGGELF  111 (350)
T ss_dssp             ECCCCSCBHH
T ss_pred             EEcCCCCCHH
Confidence            9999999874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.90  E-value=5.2e-24  Score=116.73  Aligned_cols=86  Identities=23%  Similarity=0.455  Sum_probs=76.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+.....  .....+.+|+.+++.++ ||||+++++++...+.+|+||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~ivm  105 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMVLIL  105 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCC-STTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcch--hHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEE
Confidence            569999999999999999999999999999999976532  22456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |||++|+|+
T Consensus       106 E~~~gg~L~  114 (352)
T d1koba_         106 EFLSGGELF  114 (352)
T ss_dssp             ECCCCCBHH
T ss_pred             EcCCCChHH
Confidence            999999874

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.5e-23  Score=111.69  Aligned_cols=85  Identities=18%  Similarity=0.244  Sum_probs=76.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .|.+.+.||+|+||.||++.+..++..+|+|.+......  ..+.+.+|+.+++.++ ||||+++++.+.+++.+|+|||
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ivmE   97 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVME   97 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh--HHHHHHHHHHHHHhCC-CCCEeeEeEEEEECCEEEEEEE
Confidence            689999999999999999999999999999999765322  2456899999999998 8999999999999999999999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      ||++|+|.
T Consensus        98 y~~gg~L~  105 (293)
T d1yhwa1          98 YLAGGSLT  105 (293)
T ss_dssp             CCTTCBHH
T ss_pred             ecCCCcHH
Confidence            99999874

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.90  E-value=2.1e-23  Score=111.26  Aligned_cols=89  Identities=22%  Similarity=0.389  Sum_probs=78.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-------hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-------DLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||+||++.+..++..+|+|.+++.....       ...+.+.+|+.+++.++.||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            78999999999999999999999899999999997654321       12345889999999998789999999999999


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      +.+|++|||+++|+|.
T Consensus        83 ~~~~ivmE~~~~g~L~   98 (277)
T d1phka_          83 TFFFLVFDLMKKGELF   98 (277)
T ss_dssp             SEEEEEEECCTTCBHH
T ss_pred             cceEEEEEcCCCchHH
Confidence            9999999999999885

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=3.7e-24  Score=115.59  Aligned_cols=87  Identities=21%  Similarity=0.302  Sum_probs=72.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|.+.+.||+|+||.||++.+..++..+|+|.+....... ....+.+|+.+++.++ ||||+++++.+.+++.+|+||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lvm   86 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG-KEGSMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIM   86 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh-HHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEE
Confidence            35899999999999999999999999999999997654322 2345788999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      |||++|+|.
T Consensus        87 E~~~gg~L~   95 (307)
T d1a06a_          87 QLVSGGELF   95 (307)
T ss_dssp             CCCCSCBHH
T ss_pred             eccCCCcHH
Confidence            999999885

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-23  Score=112.79  Aligned_cols=86  Identities=19%  Similarity=0.315  Sum_probs=76.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|++.+.||+|+||.||++.+..++..+|+|.+.....  ...+.+.+|+.+++.++ ||||+++++.+.+++.+++||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lvm   88 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE--EELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILI   88 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSS--GGGGGTHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH--HHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCeEEEEE
Confidence            358999999999999999999999999999999976532  22456889999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        89 Ey~~~g~L~   97 (288)
T d2jfla1          89 EFCAGGAVD   97 (288)
T ss_dssp             ECCTTEEHH
T ss_pred             ecCCCCcHH
Confidence            999999874

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=7.4e-24  Score=113.55  Aligned_cols=88  Identities=19%  Similarity=0.221  Sum_probs=77.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+.+.... ....+.+.+|+.+++.++ ||||+++++++.+.+.+|+|
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC-STTBCCEEEEEECSSEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC-CCCeeEEEEEEEECCEEEEE
Confidence            5799999999999999999999999999999999764321 222456889999999998 89999999999999999999


Q ss_pred             EeccCCCCCC
Q psy8005          81 LELLDLNHHQ   90 (91)
Q Consensus        81 ~e~~~~g~L~   90 (91)
                      |||+++|+|.
T Consensus        87 mEy~~gg~L~   96 (288)
T d1uu3a_          87 LSYAKNGELL   96 (288)
T ss_dssp             ECCCTTEEHH
T ss_pred             EEccCCCCHH
Confidence            9999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.2e-23  Score=114.19  Aligned_cols=87  Identities=18%  Similarity=0.305  Sum_probs=77.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.+++.++ ||||+++++++.+.+.+++||
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC-TTHHHHHHHHGGGGGGCC-CTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhC-HHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEE
Confidence            689999999999999999999999999999999976532 333567899999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        84 Ey~~gg~L~   92 (322)
T d1s9ja_          84 EHMDGGSLD   92 (322)
T ss_dssp             ECCTTEEHH
T ss_pred             EcCCCCcHH
Confidence            999999874

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.3e-23  Score=113.63  Aligned_cols=89  Identities=24%  Similarity=0.318  Sum_probs=78.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      |++|.+++.||+|+||.||++.+..++..+|+|.+.+.... ......+.+|+.+++.++ ||||+++++.+.+.+.+|+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~i   82 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC-CCCEEEEEeeecccccccc
Confidence            68999999999999999999999999999999999764321 122456889999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++|+|.
T Consensus        83 v~ey~~gg~L~   93 (337)
T d1o6la_          83 VMEYANGGELF   93 (337)
T ss_dssp             EEECCTTCBHH
T ss_pred             ceeccCCCchh
Confidence            99999999874

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.3e-23  Score=111.40  Aligned_cols=86  Identities=22%  Similarity=0.399  Sum_probs=73.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      ||+|++.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.+++.++ ||||+++++++.+++.++++
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-Hp~Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC-CCcEEEeccccccccceeEE
Confidence            79999999999999999999999999999999999765433333456889999999998 89999999999999999999


Q ss_pred             EeccCCC
Q psy8005          81 LELLDLN   87 (91)
Q Consensus        81 ~e~~~~g   87 (91)
                      |||+.++
T Consensus        80 ~e~~~~~   86 (298)
T d1gz8a_          80 FEFLHQD   86 (298)
T ss_dssp             EECCSEE
T ss_pred             EeecCCc
Confidence            9999765

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=2.7e-23  Score=112.56  Aligned_cols=89  Identities=18%  Similarity=0.338  Sum_probs=77.6

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      |++|++.+.||+|+||.||++.+..++..+|+|.+.+.... ....+.+.+|+.+++.++ ||||+++++++.+++.+|+
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~i   81 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc-CcChhheeeeEeeCCeeee
Confidence            57899999999999999999999999999999999754321 123456889999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++|+|.
T Consensus        82 vmE~~~gg~l~   92 (316)
T d1fota_          82 IMDYIEGGELF   92 (316)
T ss_dssp             EECCCCSCBHH
T ss_pred             EeeecCCcccc
Confidence            99999999763

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=7e-23  Score=109.71  Aligned_cols=85  Identities=20%  Similarity=0.275  Sum_probs=75.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||+|.+..++..+|+|.+......   .+.+.+|+.+++.++ ||||+++++.+...+..+++|
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~---~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv~   92 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIIT   92 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSC---HHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccch---HHHHHHHHHHHHhCC-CCCEecCCccEeeCCeeEEEe
Confidence            4678899999999999999999988999999998765432   456899999999998 899999999999999999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        93 E~~~~g~l~  101 (287)
T d1opja_          93 EFMTYGNLL  101 (287)
T ss_dssp             ECCTTCBHH
T ss_pred             ecccCcchH
Confidence            999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.9e-22  Score=107.27  Aligned_cols=86  Identities=19%  Similarity=0.262  Sum_probs=73.8

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CCeEEE
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMIL   79 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~~~~l   79 (91)
                      |++.+.||+|+||.||++.+..++..+|+|.+..........+.+.+|+.+++.++ ||||+++++++..    ...+++
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~~~i   89 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIVL   89 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEeeccccCCEEEE
Confidence            46777899999999999999999999999999876544444567899999999999 8999999998764    346899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++|+|.
T Consensus        90 vmE~~~~g~L~  100 (270)
T d1t4ha_          90 VTELMTSGTLK  100 (270)
T ss_dssp             EEECCCSCBHH
T ss_pred             EEeCCCCCcHH
Confidence            99999999874

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1e-22  Score=110.45  Aligned_cols=89  Identities=18%  Similarity=0.227  Sum_probs=74.5

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHH-hcCCCCCeeeeheeeeeCCeEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLE-ACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      |++|.+.+.||+|+||.||++.+..++..+|+|.+.+.... ....+.+..|..++. .++ ||||+++++++.+++.+|
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~-hp~Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE-HPFLTHMFCTFQTKENLF   79 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTT-CTTBCCEEEEEECSSEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCC-CCcEEEEEEEEccCCcee
Confidence            68999999999999999999999999999999999754321 122345666666665 466 899999999999999999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +||||+++|+|.
T Consensus        80 ivmEy~~~g~L~   91 (320)
T d1xjda_          80 FVMEYLNGGDLM   91 (320)
T ss_dssp             EEEECCTTCBHH
T ss_pred             EEEeecCCCcHH
Confidence            999999999874

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=2.2e-22  Score=108.71  Aligned_cols=86  Identities=19%  Similarity=0.218  Sum_probs=75.6

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .|...+.||+|+||.||+|.+..++..+|+|.+....... ...+.+.+|+.+++.++ ||||+++++++.+++.+|++|
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC-CCCEeeEEEEEEECCEEEEEE
Confidence            3888999999999999999999999999999998765433 23456889999999998 899999999999999999999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      |||++|+|
T Consensus        95 E~~~~g~l  102 (309)
T d1u5ra_          95 EYCLGSAS  102 (309)
T ss_dssp             ECCSEEHH
T ss_pred             EecCCCch
Confidence            99998865

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=7.6e-22  Score=105.16  Aligned_cols=88  Identities=17%  Similarity=0.143  Sum_probs=74.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc-hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC----e
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH----D   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~----~   76 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.+++.++ ||||+++++.+...+    .
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~-hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEEEECSSSEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC-CCCCCcccceeeeccCCCce
Confidence            4699999999999999999999999999999999765443 233456899999999998 899999999887543    4


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .|+||||+++++|.
T Consensus        86 ~~lvmE~~~g~~L~   99 (277)
T d1o6ya_          86 PYIVMEYVDGVTLR   99 (277)
T ss_dssp             EEEEEECCCEEEHH
T ss_pred             EEEEEECCCCCEeh
Confidence            89999999998764

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.86  E-value=2.9e-22  Score=110.19  Aligned_cols=89  Identities=22%  Similarity=0.369  Sum_probs=72.3

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh-HHHHHHHH---HHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHE---VAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      |++|.+.+.||+|+||.||++.+..++..+|+|.+.+...... ....+.++   +.+++.+. ||||+++++.+...+.
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~-hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSC-CTTBCCEEEEEECSSE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCC-CCcEEEEEEEEEECCE
Confidence            6899999999999999999999999999999999975432111 11223334   55566666 8999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      +|+||||+++|+|.
T Consensus        82 ~~ivmE~~~gg~L~   95 (364)
T d1omwa3          82 LSFILDLMNGGDLH   95 (364)
T ss_dssp             EEEEECCCCSCBHH
T ss_pred             EEEEEEecCCCcHH
Confidence            99999999999874

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-21  Score=103.67  Aligned_cols=84  Identities=18%  Similarity=0.266  Sum_probs=73.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||+|... .+..+|+|.++.....   .+.+.+|+.+++.++ ||||+++++++..++.+++||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~Ev~~~~~l~-HpnIv~~~g~~~~~~~~~iv~   78 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIIT   78 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSC---HHHHHHHHHHHHTCC-CTTBCCEEEEECCSSSEEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCC---HHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEE
Confidence            58899999999999999999974 5678999999865432   356899999999998 899999999999889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        79 Ey~~~g~l~   87 (258)
T d1k2pa_          79 EYMANGCLL   87 (258)
T ss_dssp             ECCTTEEHH
T ss_pred             EccCCCcHH
Confidence            999998763

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2e-21  Score=102.93  Aligned_cols=84  Identities=18%  Similarity=0.229  Sum_probs=73.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++... ++..+|+|.+......   .+.+.+|+.+++.++ ||||+++++++..++..++||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~---~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~lv~   79 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVF   79 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSC---HHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCc---HHHHHHHHHHHHhcC-CCCcccccceeccCCceEEEE
Confidence            57899999999999999999875 4678999999764332   456899999999998 899999999999889999999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        80 E~~~~g~L~   88 (263)
T d1sm2a_          80 EFMEHGCLS   88 (263)
T ss_dssp             ECCTTCBHH
T ss_pred             EecCCCcHH
Confidence            999999874

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.2e-21  Score=103.79  Aligned_cols=88  Identities=24%  Similarity=0.387  Sum_probs=78.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|++++.||+|+||.||+|.+..++..+|+|.+............+.+|+.+++.++ |||++++.+.+......+++
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~iv   79 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcC-cCCEEeeccccccccceeEE
Confidence            78999999999999999999999999999999999765544445567899999999998 89999999999999999999


Q ss_pred             EeccCCCCC
Q psy8005          81 LELLDLNHH   89 (91)
Q Consensus        81 ~e~~~~g~L   89 (91)
                      ++++.++.|
T Consensus        80 ~~~~~~~~l   88 (292)
T d1unla_          80 FEFCDQDLK   88 (292)
T ss_dssp             EECCSEEHH
T ss_pred             eeecccccc
Confidence            999987654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=1.1e-21  Score=107.49  Aligned_cols=89  Identities=19%  Similarity=0.320  Sum_probs=77.4

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccC-chhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      |++|++++.||+|+||.||++.+..++..+|+|.+.+... .....+.+.+|+.+++.++ ||||+++++.+......++
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~  118 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcC-CCcEeeccccccccccccc
Confidence            5789999999999999999999999999999999975432 1222456889999999998 8999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +||++.+|+|.
T Consensus       119 v~e~~~~g~l~  129 (350)
T d1rdqe_         119 VMEYVAGGEMF  129 (350)
T ss_dssp             EEECCTTCBHH
T ss_pred             ccccccccchh
Confidence            99999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=1.7e-21  Score=104.84  Aligned_cols=87  Identities=16%  Similarity=0.274  Sum_probs=71.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc---EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~---~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|++.+.||+|+||.||++....++.   .+|+|.+..... ....+.+.+|+.+++.++ ||||+++++++..++.++
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~  103 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT-EKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVM  103 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCC-HHHHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSSCE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccC-HHHHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCEEE
Confidence            467888999999999999998876543   578888765432 233556899999999998 899999999999899999


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++|+|.
T Consensus       104 iv~Ey~~~g~L~  115 (299)
T d1jpaa_         104 IITEFMENGSLD  115 (299)
T ss_dssp             EEEECCTTEEHH
T ss_pred             EEEEecCCCcce
Confidence            999999999874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.1e-21  Score=104.15  Aligned_cols=88  Identities=19%  Similarity=0.220  Sum_probs=71.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc--EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT--QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~l   79 (91)
                      ++|++.+.||+|+||.||+|....++.  .+++|.+...... ...+.+.+|+.++..+.+||||+++++++...+..++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~i   88 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK-DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   88 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccCh-HHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEE
Confidence            688999999999999999999887765  4677777543322 2245689999999998558999999999999999999


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++|+|.
T Consensus        89 V~ey~~~g~L~   99 (309)
T d1fvra_          89 AIEYAPHGNLL   99 (309)
T ss_dssp             EECCCTTCBHH
T ss_pred             EEEecCCCcHH
Confidence            99999999874

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.84  E-value=8.6e-21  Score=102.99  Aligned_cols=84  Identities=21%  Similarity=0.358  Sum_probs=73.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--CCeEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMIL   79 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~~~l   79 (91)
                      ++|++++.||+|+||.||++.+..++..+|+|.+....     .+.+.+|+.+++.+.+||||+++++.+..  ...+++
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~  109 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  109 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence            57999999999999999999999999999999986542     44678899999999768999999999874  346899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      +|||+++++|.
T Consensus       110 v~e~~~~~~L~  120 (328)
T d3bqca1         110 VFEHVNNTDFK  120 (328)
T ss_dssp             EEECCCSCBGG
T ss_pred             EEeecCCCcHH
Confidence            99999999874

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.5e-21  Score=106.39  Aligned_cols=83  Identities=20%  Similarity=0.290  Sum_probs=68.8

Q ss_pred             CCcceeec-eecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee----CC
Q psy8005           1 MVNTKITK-SFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SH   75 (91)
Q Consensus         1 ~~~~~~~~-~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----~~   75 (91)
                      +++|.+.. .||+|+||.||+|.+..++..+|+|.+...       ....+|+.++..+.+||||+++++++.+    ..
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~   82 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK   82 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence            36898865 699999999999999999999999998643       2456788887666558999999998865    45


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      .+|++||||++|+|+
T Consensus        83 ~~~ivmEy~~gg~L~   97 (335)
T d2ozaa1          83 CLLIVMECLDGGELF   97 (335)
T ss_dssp             EEEEEEECCCSEEHH
T ss_pred             EEEEEEECCCCCcHH
Confidence            789999999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=5.7e-21  Score=104.69  Aligned_cols=86  Identities=21%  Similarity=0.252  Sum_probs=72.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee------CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~------~~   75 (91)
                      ++|++.+.||+|+||+||+|.+..++..+|+|.+............+.+|+.+++.++ ||||+++++++..      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTTTCC
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcC-CCCeeEEEEEEecccccccCc
Confidence            5799999999999999999999999999999999876544444556889999999998 8999999998853      36


Q ss_pred             eEEEEEeccCCCC
Q psy8005          76 DMILLLELLDLNH   88 (91)
Q Consensus        76 ~~~lv~e~~~~g~   88 (91)
                      .+|++|||+.++.
T Consensus        96 ~~~iv~Ey~~~~l  108 (355)
T d2b1pa1          96 DVYLVMELMDANL  108 (355)
T ss_dssp             EEEEEEECCSEEH
T ss_pred             eeEEEEeccchHH
Confidence            7899999998764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.5e-20  Score=99.99  Aligned_cols=83  Identities=18%  Similarity=0.255  Sum_probs=69.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||+|... .+..+|+|.+......   .+.+.+|+.+++.++ ||||+++++++. .+..++||
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~-HpnIv~~~g~~~-~~~~~iv~   86 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQ-HQRLVRLYAVVT-QEPIYIIT   86 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCC-CTTBCCEEEEEC-SSSCEEEE
T ss_pred             HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCC---HHHHHHHHHHHHhCC-CCCEeEEEeeec-cCCeEEEE
Confidence            57888999999999999999864 4678999999764332   456899999999998 899999999765 45679999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        87 Ey~~~g~L~   95 (272)
T d1qpca_          87 EYMENGSLV   95 (272)
T ss_dssp             ECCTTCBHH
T ss_pred             EeCCCCcHH
Confidence            999999874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=8e-21  Score=103.13  Aligned_cols=88  Identities=18%  Similarity=0.222  Sum_probs=70.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC-----cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG-----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||++.....+     ..+|+|.+..... ......+.+|+.++..+.+||||+++++.+...+.
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC-HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            46888999999999999999876543     2688998865432 22234588999999998558999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      +++|||||++|+|.
T Consensus       116 ~~lv~Ey~~~g~L~  129 (325)
T d1rjba_         116 IYLIFEYCCYGDLL  129 (325)
T ss_dssp             CEEEEECCTTCBHH
T ss_pred             EEEEEEcCCCCcHH
Confidence            99999999999874

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.6e-21  Score=103.28  Aligned_cols=83  Identities=20%  Similarity=0.293  Sum_probs=68.9

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeee-eCCeEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-SSHDMIL   79 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~~~l   79 (91)
                      |++|++.+.||+|+||.||++..  .+..+|+|.++....    .+.+.+|+.+++.++ ||||+++++++. .++.+++
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~~----~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~l   78 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT----AQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYI   78 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC------HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCEE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHHH----HHHHHHHHHHHHhCC-CCCEeeEEEEEEecCCcEEE
Confidence            57899999999999999999987  367899999965432    456889999999998 899999999874 4566899


Q ss_pred             EEeccCCCCCC
Q psy8005          80 LLELLDLNHHQ   90 (91)
Q Consensus        80 v~e~~~~g~L~   90 (91)
                      ||||+++|+|.
T Consensus        79 v~ey~~~g~L~   89 (262)
T d1byga_          79 VTEYMAKGSLV   89 (262)
T ss_dssp             EECCCTTEEHH
T ss_pred             EEeccCCCCHH
Confidence            99999999874

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.83  E-value=3.3e-21  Score=102.99  Aligned_cols=86  Identities=22%  Similarity=0.417  Sum_probs=74.6

Q ss_pred             CCcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEE
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   80 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv   80 (91)
                      |++|.+.+.||+|+||.||+|.+. ++..+|+|.+............+.+|+.+++.++ ||||+++++.+..++..+++
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~i~   78 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLV   78 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC-CCcEEeeeeecccCCceeEE
Confidence            789999999999999999999885 6789999999765433333456889999999998 89999999999999999999


Q ss_pred             EeccCCCC
Q psy8005          81 LELLDLNH   88 (91)
Q Consensus        81 ~e~~~~g~   88 (91)
                      +|++.++.
T Consensus        79 ~e~~~~~~   86 (286)
T d1ob3a_          79 FEHLDQDL   86 (286)
T ss_dssp             EECCSEEH
T ss_pred             EEeehhhh
Confidence            99997664

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2e-20  Score=100.11  Aligned_cols=86  Identities=21%  Similarity=0.293  Sum_probs=68.4

Q ss_pred             Ccceeece-ecCcCeeEEEEEEEccC--CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKS-FPLGKYATVRRCRDRKN--GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~-ig~g~~~~v~~~~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      +++.+.+. ||+|+||.||+|.....  +..||+|.+..... ....+.+.+|+.+++.++ ||||+++++++.. +.++
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~E~~il~~l~-HpnIv~l~g~~~~-~~~~   84 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EALM   84 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHCC-CTTBCCEEEEEES-SSEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcC-HHHHHHHHHHHHHHHhCC-CCCEeeEeeeecc-CeEE
Confidence            45667774 99999999999977543  45799999975432 334567999999999998 8999999998864 4589


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      +||||+++|+|.
T Consensus        85 lvmE~~~~g~L~   96 (285)
T d1u59a_          85 LVMEMAGGGPLH   96 (285)
T ss_dssp             EEEECCTTEEHH
T ss_pred             EEEEeCCCCcHH
Confidence            999999999874

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=6.3e-21  Score=101.64  Aligned_cols=84  Identities=14%  Similarity=0.150  Sum_probs=69.9

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|.+.+.||+|+||.||++..   ...+|+|.+..........+.+.+|+.+++.++ ||||++++++.. .+.++++|
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~---~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~~~~~~~-~~~~~lv~   82 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYST-APQLAIVT   82 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEES---SSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSCEEEE
T ss_pred             ccEEEEEEEeeCCCcEEEEEEE---CCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC-CCCEeeeeEEEe-ccEEEEEE
Confidence            5788899999999999999964   346999999766544444667999999999998 899999998764 45689999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        83 Ey~~~g~L~   91 (276)
T d1uwha_          83 QWCEGSSLY   91 (276)
T ss_dssp             ECCCEEEHH
T ss_pred             ecCCCCCHH
Confidence            999999874

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5.7e-20  Score=98.29  Aligned_cols=83  Identities=19%  Similarity=0.224  Sum_probs=70.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      ++|++.+.||+|+||.||++.... +..+|+|.+......   .+.+.+|+.+++.++ ||||+++++++. .+..++||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~-~~~vAiK~l~~~~~~---~~~~~~E~~~l~~l~-h~nIv~~~g~~~-~~~~~lv~   90 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLR-HEKLVQLYAVVS-EEPIYIVT   90 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSC---HHHHHHHHHHHHHCC-CTTBCCEEEEEC-SSSCEEEE
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECC-CCEEEEEEECcccCC---HHHHHHHHHHHHhcc-cCCEeEEEEEEe-cCCeEEEE
Confidence            678999999999999999998764 457999999765432   356899999999998 899999999885 45689999


Q ss_pred             eccCCCCCC
Q psy8005          82 ELLDLNHHQ   90 (91)
Q Consensus        82 e~~~~g~L~   90 (91)
                      ||+++|+|.
T Consensus        91 Ey~~~g~l~   99 (285)
T d1fmka3          91 EYMSKGSLL   99 (285)
T ss_dssp             CCCTTCBHH
T ss_pred             EecCCCchh
Confidence            999999763

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.9e-20  Score=99.90  Aligned_cols=88  Identities=15%  Similarity=0.161  Sum_probs=73.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEc-----cCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|++.+.||+|+||.||++...     .++..+|+|.+..... ......+.+|+.++..+.+||||+++++.+...+.
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC-HHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            46788999999999999999763     3456899999976543 33355688999999999669999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++|||+++|+|.
T Consensus       102 ~~lvmE~~~~g~l~  115 (311)
T d1t46a_         102 TLVITEYCCYGDLL  115 (311)
T ss_dssp             CEEEEECCTTEEHH
T ss_pred             EEEEEEcCCCCCHH
Confidence            99999999998763

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.4e-20  Score=98.81  Aligned_cols=81  Identities=25%  Similarity=0.384  Sum_probs=63.8

Q ss_pred             ceecCcCeeEEEEEEEcc--CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEeccC
Q psy8005           8 KSFPLGKYATVRRCRDRK--NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLD   85 (91)
Q Consensus         8 ~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e~~~   85 (91)
                      +.||+|+||.||+|....  .+..+|+|.+..........+.+.+|+.+++.++ ||||+++++++.. +..++||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~-HpnIv~~~g~~~~-~~~~lvmE~~~   90 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRMIGICEA-ESWMLVMEMAE   90 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC-CTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCC-CCCCceEEEEecc-CCEEEEEEcCC
Confidence            469999999999997643  3468999999765443444567999999999998 8999999998865 45789999999


Q ss_pred             CCCCC
Q psy8005          86 LNHHQ   90 (91)
Q Consensus        86 ~g~L~   90 (91)
                      +|+|.
T Consensus        91 ~g~L~   95 (277)
T d1xbba_          91 LGPLN   95 (277)
T ss_dssp             TEEHH
T ss_pred             CCcHH
Confidence            99874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.8e-19  Score=98.37  Aligned_cols=83  Identities=20%  Similarity=0.321  Sum_probs=65.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~------   75 (91)
                      +.|++++.||+|+||.||+|.+..++..+|+|.+.+........+.+.+|+.+++.++ |||++++++++...+      
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-HENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC-BTTBCCCSEEECSCSSTTTCC
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcC-CCCeeEEEEEeccCccccccc
Confidence            5788999999999999999999999999999999765544445567899999999998 899999999987554      


Q ss_pred             eEEEEEeccC
Q psy8005          76 DMILLLELLD   85 (91)
Q Consensus        76 ~~~lv~e~~~   85 (91)
                      .++++|||++
T Consensus        97 ~~~lv~e~~~  106 (346)
T d1cm8a_          97 DFYLVMPFMG  106 (346)
T ss_dssp             CCEEEEECCS
T ss_pred             eEEEEEeccc
Confidence            4799999994

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.1e-20  Score=100.46  Aligned_cols=83  Identities=20%  Similarity=0.373  Sum_probs=66.6

Q ss_pred             eeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchh---HHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEEe
Q psy8005           6 ITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD---LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   82 (91)
Q Consensus         6 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~e   82 (91)
                      .++.||+|+||+||+|.+..++..+|+|.+........   ....+.+|+.+++.++ ||||+++++++...+.+++|||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~-hpnIv~~~~~~~~~~~~~ivmE   80 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFD   80 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTCCEEEEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC-CCCEeEEEeeeccCCceeehhh
Confidence            35789999999999999999999999999976432211   1235789999999998 8999999999999999999999


Q ss_pred             ccCCCCC
Q psy8005          83 LLDLNHH   89 (91)
Q Consensus        83 ~~~~g~L   89 (91)
                      |++++.+
T Consensus        81 ~~~~~~~   87 (299)
T d1ua2a_          81 FMETDLE   87 (299)
T ss_dssp             CCSEEHH
T ss_pred             hhcchHH
Confidence            9987653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.3e-20  Score=102.17  Aligned_cols=90  Identities=26%  Similarity=0.337  Sum_probs=75.2

Q ss_pred             CCcceeeceecCcCeeEEEEEEEc---cCCcEEEEEEeccccCc--hhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC
Q psy8005           1 MVNTKITKSFPLGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   75 (91)
Q Consensus         1 ~~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~   75 (91)
                      +++|++.+.||+|+||.||++...   .++..+|+|.+.+....  ....+.+.+|+.+++.+++||||+++++.+.+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            478999999999999999999874   35789999999764321  1123457789999999986699999999999999


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      ..++++||+.+|+|.
T Consensus       103 ~~~~v~e~~~~~~L~  117 (322)
T d1vzoa_         103 KLHLILDYINGGELF  117 (322)
T ss_dssp             EEEEEECCCCSCBHH
T ss_pred             ceeeeeecccccHHH
Confidence            999999999999874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.80  E-value=2.3e-19  Score=96.48  Aligned_cols=87  Identities=24%  Similarity=0.335  Sum_probs=74.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|++.+.||+|+||.||+|....     ++..+|+|.+..... ......+.+|+.+++.++ |||++++++.+.....
T Consensus        13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~   90 (301)
T d1lufa_          13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFD-NPNIVKLLGVCAVGKP   90 (301)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSS
T ss_pred             HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC-hHHHHHHHHHHHHHHhcC-CCCcccceeeeccCCc
Confidence            479999999999999999998653     346899999875432 334566999999999998 8999999999999999


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++++|++++|+|.
T Consensus        91 ~~~v~e~~~~g~L~  104 (301)
T d1lufa_          91 MCLLFEYMAYGDLN  104 (301)
T ss_dssp             CEEEEECCTTCBHH
T ss_pred             eEEEEEecCCCcHH
Confidence            99999999999874

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.1e-19  Score=97.97  Aligned_cols=87  Identities=16%  Similarity=0.275  Sum_probs=72.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEcc-----CCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~   76 (91)
                      ++|.+.+.||+|+||.||+|....     .+..||+|.+..... ......+.+|+.+++.++ ||||+++++.+...+.
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~-~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFN-CHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCC-CTTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccC-hHHHHHHHHHHHHHHHcC-CCCEeeeeeEEecCCc
Confidence            567889999999999999997642     346899999975432 233456889999999998 8999999999988889


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .++||||+++|+|.
T Consensus        98 ~~lv~e~~~~g~l~  111 (308)
T d1p4oa_          98 TLVIMELMTRGDLK  111 (308)
T ss_dssp             CEEEEECCTTCBHH
T ss_pred             eeEEEeecCCCCHH
Confidence            99999999999874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.8e-19  Score=95.46  Aligned_cols=86  Identities=15%  Similarity=0.237  Sum_probs=70.7

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC----cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      +.|...+.||+|+||.||+|....++    ..+|+|.+..... ......+.+|+.++..++ ||||+++++++...+..
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~-H~nIv~~~g~~~~~~~~   84 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFS-HHNIIRLEGVISKYKPM   84 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC-hHHHHHHHHHHHHHHhcC-CCCEeeeeEEEecCCce
Confidence            46888999999999999999876543    3689999865432 233446889999999998 89999999999988999


Q ss_pred             EEEEeccCCCCC
Q psy8005          78 ILLLELLDLNHH   89 (91)
Q Consensus        78 ~lv~e~~~~g~L   89 (91)
                      +++|||+.++++
T Consensus        85 ~~v~e~~~~~~l   96 (283)
T d1mqba_          85 MIITEYMENGAL   96 (283)
T ss_dssp             EEEEECCTTEEH
T ss_pred             EEEEEecccCcc
Confidence            999999998765

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2e-19  Score=95.61  Aligned_cols=86  Identities=16%  Similarity=0.249  Sum_probs=70.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC---CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   78 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~   78 (91)
                      ++|++.+.||+|+||.||+|.+...   +..+|+|.+.... .....+.+.+|+.+++.++ ||||+++++.+. .+..+
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~-~~~~~   83 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFD-HPHIVKLIGVIT-ENPVW   83 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCC-CTTBCCEEEEEC-SSSCE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc-CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEe-cCeEE
Confidence            5789999999999999999987654   3468888885443 2334566999999999998 899999999885 46689


Q ss_pred             EEEeccCCCCCC
Q psy8005          79 LLLELLDLNHHQ   90 (91)
Q Consensus        79 lv~e~~~~g~L~   90 (91)
                      ++|||+++|+|.
T Consensus        84 iv~E~~~~g~l~   95 (273)
T d1mp8a_          84 IIMELCTLGELR   95 (273)
T ss_dssp             EEEECCTTEEHH
T ss_pred             EEEEeccCCcHH
Confidence            999999998763

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.4e-19  Score=98.73  Aligned_cols=88  Identities=19%  Similarity=0.219  Sum_probs=72.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----e
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----D   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----~   76 (91)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+.+..........+.+|+.+++.++ |||++++++++....     .
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~-h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSTTTCC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcC-CCCeeeEEEEEeeccccccCc
Confidence            5799999999999999999999999999999999866544444556889999999998 899999999875432     3


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++++++.+|+|.
T Consensus        97 ~~~i~~~~~gg~L~  110 (348)
T d2gfsa1          97 DVYLVTHLMGADLN  110 (348)
T ss_dssp             CCEEEEECCSEEHH
T ss_pred             eEEEEEeecCCchh
Confidence            45666777888764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1e-19  Score=98.36  Aligned_cols=86  Identities=16%  Similarity=0.310  Sum_probs=68.8

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee--------
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--------   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--------   73 (91)
                      ++|++.+.||+|+||+||+|.+..++..||+|.+............+.+|+.+++.++ |+|++++.+.+..        
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~-h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCC-CTTBCCEEEEEEC--------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhc-CCCccceEeeeeccccccccc
Confidence            6899999999999999999999999999999998765443333456889999999998 8999999887744        


Q ss_pred             CCeEEEEEeccCCCC
Q psy8005          74 SHDMILLLELLDLNH   88 (91)
Q Consensus        74 ~~~~~lv~e~~~~g~   88 (91)
                      .+.++++||++.++.
T Consensus        89 ~~~~~iv~e~~~~~~  103 (318)
T d3blha1          89 KGSIYLVFDFCEHDL  103 (318)
T ss_dssp             --CEEEEEECCCEEH
T ss_pred             CceEEEEEeccCCCc
Confidence            345899999997654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.3e-19  Score=95.80  Aligned_cols=88  Identities=13%  Similarity=0.179  Sum_probs=67.5

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCC-------cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNG-------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   74 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~   74 (91)
                      ++|.+.+.||+|+||.||++.....+       ..+|+|.+..... ......+.+|...+..+.+||||+++++++..+
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC-hHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            67889999999999999999865433       3789999976543 233456888888888885599999999999999


Q ss_pred             CeEEEEEeccCCCCCC
Q psy8005          75 HDMILLLELLDLNHHQ   90 (91)
Q Consensus        75 ~~~~lv~e~~~~g~L~   90 (91)
                      +.+++||||+++|+|.
T Consensus        92 ~~~~~v~e~~~~g~l~  107 (299)
T d1fgka_          92 GPLYVIVEYASKGNLR  107 (299)
T ss_dssp             SSCEEEECCCTTCBHH
T ss_pred             CeEEEEEEccCCCcHH
Confidence            9999999999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.8e-18  Score=92.79  Aligned_cols=86  Identities=23%  Similarity=0.260  Sum_probs=66.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCc----EEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|++++.||+|+||.||+|....++.    .+|+|.+..... ....+.+.+|+.+++.++ ||||+++++++..+ ..
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~-~~   85 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVD-NPHVCRLLGICLTS-TV   85 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-SE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccC-HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC-Ce
Confidence            469999999999999999999876664    578888764322 223556899999999998 89999999998765 46


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      ++++|++.+|+|.
T Consensus        86 ~~v~e~~~~~~l~   98 (317)
T d1xkka_          86 QLITQLMPFGCLL   98 (317)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             eEEEEeccCCccc
Confidence            7888999988764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=7.4e-19  Score=93.47  Aligned_cols=87  Identities=20%  Similarity=0.274  Sum_probs=62.0

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-C--cEEEEEEeccccCch-hHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-G--TQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   77 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-~--~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~   77 (91)
                      ++|++.+.||+|+||.||+|..... +  ..+|+|.+.+..... ...+.+.+|+.+++.++ ||||+++++++.+ +..
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSC
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEee-cch
Confidence            4789999999999999999976433 2  368999987654322 23456899999999998 8999999999865 467


Q ss_pred             EEEEeccCCCCCC
Q psy8005          78 ILLLELLDLNHHQ   90 (91)
Q Consensus        78 ~lv~e~~~~g~L~   90 (91)
                      +++|||+++|++.
T Consensus        86 ~lv~e~~~~~~l~   98 (273)
T d1u46a_          86 KMVTELAPLGSLL   98 (273)
T ss_dssp             EEEEECCTTCBHH
T ss_pred             heeeeeecCcchh
Confidence            8999999998763

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.9e-19  Score=94.49  Aligned_cols=86  Identities=20%  Similarity=0.232  Sum_probs=71.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCch----hHHHHHHHHHHHHHhcCC-CCCeeeeheeeeeCCe
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRC-NSRIVQLHQVFESSHD   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~i~~l~~~~~~~~~   76 (91)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+.+.....    .....+.+|+.+++.+++ ||||+++++++.+++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            46999999999999999999999999999999997643221    111235678999998863 7999999999999999


Q ss_pred             EEEEEeccCCC
Q psy8005          77 MILLLELLDLN   87 (91)
Q Consensus        77 ~~lv~e~~~~g   87 (91)
                      .+++||++.++
T Consensus        84 ~~lv~e~~~~~   94 (273)
T d1xwsa_          84 FVLILERPEPV   94 (273)
T ss_dssp             EEEEEECCSSE
T ss_pred             EEEEEEeccCc
Confidence            99999999763

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.5e-18  Score=94.80  Aligned_cols=86  Identities=17%  Similarity=0.176  Sum_probs=66.1

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCC-----e
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----D   76 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-----~   76 (91)
                      ++|.+++.||+|+||.||+|.+..++..+|+|.+.+... ......+.+|+.+++.++ |||++++++.+..+.     .
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~Ei~il~~l~-hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTC-HHHHHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTTCCC
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcC-hHHHHHHHHHHHHHHHcC-CCCCCcEEEEEeeccccccce
Confidence            469999999999999999999999999999999975432 333556889999999998 899999998886543     2


Q ss_pred             EEEEEeccCCCCCC
Q psy8005          77 MILLLELLDLNHHQ   90 (91)
Q Consensus        77 ~~lv~e~~~~g~L~   90 (91)
                      .+++ +++.+|+|+
T Consensus        86 ~~l~-~~~~~g~L~   98 (345)
T d1pmea_          86 VYLV-THLMGADLY   98 (345)
T ss_dssp             EEEE-EECCCEEHH
T ss_pred             EEEE-EeecCCchh
Confidence            4454 556677764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=8.8e-18  Score=90.70  Aligned_cols=82  Identities=12%  Similarity=0.166  Sum_probs=65.5

Q ss_pred             eceecCcCeeEEEEEEEccCC---cEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CCeEEEEEe
Q psy8005           7 TKSFPLGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHDMILLLE   82 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~~~~lv~e   82 (91)
                      .+.||+|+||+||+|.....+   ..+|+|.++... .....+.+.+|+.+++.++ ||||+++++++.. +...++|||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCC-CHHHHHHHHHHHHHHHTCC-CTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCC-CCCEeEEeEEEEecCCceEEEEE
Confidence            568999999999999876543   368999986532 2333567999999999998 8999999998764 568899999


Q ss_pred             ccCCCCCC
Q psy8005          83 LLDLNHHQ   90 (91)
Q Consensus        83 ~~~~g~L~   90 (91)
                      |+++|+|.
T Consensus       110 ~~~~g~l~  117 (311)
T d1r0pa_         110 YMKHGDLR  117 (311)
T ss_dssp             CCTTCBHH
T ss_pred             EeecCchh
Confidence            99999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.2e-18  Score=95.29  Aligned_cols=78  Identities=22%  Similarity=0.238  Sum_probs=65.2

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeC------Ce
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------HD   76 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~------~~   76 (91)
                      +|...+.||+|+||+||++.+..++..+|+|.+......      ..+|+.+++.++ |+|++++++.+...      ..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~------~~~Ei~il~~l~-h~niv~~~~~~~~~~~~~~~~~   93 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF------KNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVY   93 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS------CCHHHHHHHHCC-CTTBCCEEEEEEEC--CCSCCE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH------HHHHHHHHHhcC-CCCCCcEEEEEEecCccCCceE
Confidence            578889999999999999999999999999999765321      236899999998 89999999887432      35


Q ss_pred             EEEEEeccCCC
Q psy8005          77 MILLLELLDLN   87 (91)
Q Consensus        77 ~~lv~e~~~~g   87 (91)
                      ++++|||++++
T Consensus        94 ~~lv~Ey~~~~  104 (350)
T d1q5ka_          94 LNLVLDYVPET  104 (350)
T ss_dssp             EEEEEECCSEE
T ss_pred             EEEEEeccCCc
Confidence            78999999875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.8e-18  Score=92.99  Aligned_cols=88  Identities=25%  Similarity=0.322  Sum_probs=66.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-CcEEEEEEeccccCchhHHHHHHHHHHHHHhcC--CCCCeeeeheeeee-----
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQVFES-----   73 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~l~~~~~~-----   73 (91)
                      ++|++++.||+|+||.||++.+..+ +..+|+|.+..............+|+.+++.+.  +||||+++++.+..     
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            5799999999999999999998766 557899999764432222234566777776653  38999999988753     


Q ss_pred             CCeEEEEEeccCCCCC
Q psy8005          74 SHDMILLLELLDLNHH   89 (91)
Q Consensus        74 ~~~~~lv~e~~~~g~L   89 (91)
                      ...+++++|+++++.+
T Consensus        87 ~~~~~~~~e~~~~~~~  102 (305)
T d1blxa_          87 ETKLTLVFEHVDQDLT  102 (305)
T ss_dssp             EEEEEEEEECCSCBHH
T ss_pred             CceEEEEEEeccCCch
Confidence            3468999999988753

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.4e-17  Score=89.36  Aligned_cols=88  Identities=14%  Similarity=0.192  Sum_probs=67.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccC-----CcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeee-CC
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SH   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~-~~   75 (91)
                      ++|++.+.||+|+||.||+|.....     +..+|+|.+..... ......+..+...+..+.+|+|++.+++.+.. ..
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-cHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            5789999999999999999986532     35799999875433 22345577888888888778999999887654 45


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      .++++||||++|+|.
T Consensus        92 ~~~iv~E~~~~g~L~  106 (299)
T d1ywna1          92 PLMVIVEFCKFGNLS  106 (299)
T ss_dssp             CCEEEEECCTTCBHH
T ss_pred             eEEEEEEecCCCcHH
Confidence            789999999999874

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.73  E-value=1.3e-17  Score=89.42  Aligned_cols=83  Identities=16%  Similarity=0.191  Sum_probs=70.2

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      .+|++.+.||+|+||.||++.+..++..+|+|.+.....    ...+.+|...+..+.++++++.+++.+......+++|
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence            479999999999999999999999999999999865432    1236678888889887799999999999999999999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      ||+. ++|
T Consensus        81 e~~~-~~l   87 (293)
T d1csna_          81 DLLG-PSL   87 (293)
T ss_dssp             ECCC-CBH
T ss_pred             EecC-CCH
Confidence            9984 544

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.2e-17  Score=88.80  Aligned_cols=81  Identities=14%  Similarity=0.215  Sum_probs=62.3

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHH--HhcCCCCCeeeeheeeeeCC----
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVL--EACRCNSRIVQLHQVFESSH----   75 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~l~~~~~~~~----   75 (91)
                      ++|.+.+.||+|+||.||++..  .+..+|+|.++...     .....+|.+++  ..++ ||||+++++.+...+    
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~-----~~~~~~e~ei~~~~~~~-HpnIv~~~~~~~~~~~~~~   74 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLR-HENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-----hhHHHHHHHHHHHhhCC-CCcCcceEEEEEeCCCcce
Confidence            4677889999999999999975  57899999986542     22334444444  4566 899999999876543    


Q ss_pred             eEEEEEeccCCCCCC
Q psy8005          76 DMILLLELLDLNHHQ   90 (91)
Q Consensus        76 ~~~lv~e~~~~g~L~   90 (91)
                      .+++||||+++|+|.
T Consensus        75 ~~~lv~Ey~~~g~L~   89 (303)
T d1vjya_          75 QLWLVSDYHEHGSLF   89 (303)
T ss_dssp             EEEEEEECCTTCBHH
T ss_pred             EEEEEEecccCCCHH
Confidence            689999999999874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=4.8e-17  Score=87.24  Aligned_cols=82  Identities=13%  Similarity=0.174  Sum_probs=67.4

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+......    ..+..|+.+++.+.+|++++.+..+....+..+++|
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivm   82 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS----CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC----HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEE
Confidence            4699999999999999999999989999999998764322    246789999999985555666677777888899999


Q ss_pred             eccCCC
Q psy8005          82 ELLDLN   87 (91)
Q Consensus        82 e~~~~g   87 (91)
                      ||++++
T Consensus        83 e~~~~~   88 (299)
T d1ckia_          83 ELLGPS   88 (299)
T ss_dssp             ECCCCB
T ss_pred             EEcCCc
Confidence            999654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.39  E-value=2.8e-12  Score=69.97  Aligned_cols=81  Identities=19%  Similarity=0.291  Sum_probs=61.4

Q ss_pred             cceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCC----------CCCeeeeheeee
Q psy8005           3 NTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC----------NSRIVQLHQVFE   72 (91)
Q Consensus         3 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~i~~l~~~~~   72 (91)
                      .|++++.||+|+||.||++.+..++..+|+|.+.+..   ...+...+|+.+++.+.+          |+|++++.+.+.
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~---~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc---cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            4999999999999999999999999999999997542   223456777777776641          578999887765


Q ss_pred             e--CCeEEEEEeccCC
Q psy8005          73 S--SHDMILLLELLDL   86 (91)
Q Consensus        73 ~--~~~~~lv~e~~~~   86 (91)
                      .  ....+++++++..
T Consensus        91 ~~~~~~~~~~~~~~~~  106 (362)
T d1q8ya_          91 HKGPNGVHVVMVFEVL  106 (362)
T ss_dssp             EEETTEEEEEEEECCC
T ss_pred             eccccceeeeeeeccc
Confidence            3  3456666666544

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.18  E-value=1.4e-10  Score=58.41  Aligned_cols=80  Identities=19%  Similarity=0.163  Sum_probs=54.5

Q ss_pred             ceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCc----------------hhHHHHHHHHHHHHHhcCCCCCeeee
Q psy8005           4 TKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRS----------------TDLKAEILHEVAVLEACRCNSRIVQL   67 (91)
Q Consensus         4 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~i~~l   67 (91)
                      +.+.+.||+|+||.||++.+. ++..+|+|.+......                .........|...+..+. +++++..
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~v~~~   79 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPKV   79 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCCE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc-CCCcceE
Confidence            457899999999999999874 5889999987542110                001122455677778887 6888776


Q ss_pred             heeeeeCCeEEEEEeccCCCCC
Q psy8005          68 HQVFESSHDMILLLELLDLNHH   89 (91)
Q Consensus        68 ~~~~~~~~~~~lv~e~~~~g~L   89 (91)
                      ++..    ..+++||++++..+
T Consensus        80 ~~~~----~~~lvme~~~~~~~   97 (191)
T d1zara2          80 YAWE----GNAVLMELIDAKEL   97 (191)
T ss_dssp             EEEE----TTEEEEECCCCEEG
T ss_pred             EEec----CCEEEEEeeccccc
Confidence            5432    23799999987643

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.47  E-value=0.00044  Score=35.58  Aligned_cols=84  Identities=11%  Similarity=-0.049  Sum_probs=51.6

Q ss_pred             CcceeeceecCcCeeEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCCCCeeeeheeeeeCCeEEEEE
Q psy8005           2 VNTKITKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   81 (91)
Q Consensus         2 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~lv~   81 (91)
                      +.|++.+..+-++.+.||+..  ..+..+.+|.........  ...+.+|...+..+..+-.++++......++..+++|
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~--~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~   89 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccc--hhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEE
Confidence            345555443334446788764  345567788775443211  2235667777766654444566666666778889999


Q ss_pred             eccCCCCC
Q psy8005          82 ELLDLNHH   89 (91)
Q Consensus        82 e~~~~g~L   89 (91)
                      ++++|.++
T Consensus        90 ~~l~G~~~   97 (263)
T d1j7la_          90 SEADGVLC   97 (263)
T ss_dssp             ECCSSEEH
T ss_pred             Eecccccc
Confidence            99988654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=95.84  E-value=0.037  Score=27.99  Aligned_cols=69  Identities=17%  Similarity=0.004  Sum_probs=42.3

Q ss_pred             eEEEEEEEccCCcEEEEEEeccccCchhHHHHHHHHHHHHHhcCCC-CCeeeeheeeeeCCeEEEEEeccCCCCCC
Q psy8005          16 ATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLLELLDLNHHQ   90 (91)
Q Consensus        16 ~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~l~~~~~~~~~~~lv~e~~~~g~L~   90 (91)
                      +.||+... ..+..+.+|.......     ..+..|...++.+..+ ..+++++.....++..+++|++++|.++.
T Consensus        25 ~~v~r~~~-~~~~~~vlK~~~~~~~-----~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          25 AAVFRLSA-QGRPVLFVKTDLSGAL-----NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             CEEEEEEC-TTSCCEEEEEECSCTT-----SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CeEEEEEe-CCCCEEEEEeCCccCH-----hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            56787754 3455678887654322     1244555555554421 33556666666777889999999886653

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.73  E-value=0.016  Score=31.73  Aligned_cols=80  Identities=10%  Similarity=-0.039  Sum_probs=44.9

Q ss_pred             eceecCcCeeEEEEEEEccCCcEEEEEEecccc--Cc---hhHHHHHHHHHHHHHhcCCC--CCeeeeheeeeeCCeEEE
Q psy8005           7 TKSFPLGKYATVRRCRDRKNGTQYAAKFLRKKR--RS---TDLKAEILHEVAVLEACRCN--SRIVQLHQVFESSHDMIL   79 (91)
Q Consensus         7 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~--~~i~~l~~~~~~~~~~~l   79 (91)
                      .+.+|.|....||+..+...+..+++|.-....  ..   .........|...++.+..+  ..+++++..  +.+..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            457899999999999876667788888764311  00   00112344566666665432  223344322  3445678


Q ss_pred             EEeccCCCC
Q psy8005          80 LLELLDLNH   88 (91)
Q Consensus        80 v~e~~~~g~   88 (91)
                      +||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997643